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  Home > Genomes > Gorilla gorilla 69_3.1 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Gorilla gorilla 69_3.1

Assignment details

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Gorilla gorilla 69_3.1 has 314 significant domains in 51 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000000296   0.000000000189   41-102   Complement control module/SCR domain  
ENSGGOP00000000360   1.67e-19   2408-2476   Complement control module/SCR domain  
  1.62e-18   2465-2534   Complement control module/SCR domain  
  2.16e-18   2764-2835   Complement control module/SCR domain  
  1.39e-17   2648-2716   Complement control module/SCR domain  
  3.64e-17   2824-2893   Complement control module/SCR domain  
  6.39e-17   2523-2597   Complement control module/SCR domain  
  6.25e-16   2705-2775   Complement control module/SCR domain  
  0.00000000000000243   1119-1183   Complement control module/SCR domain  
  0.00000000000000337   2944-3012   Complement control module/SCR domain  
  0.00000000000000361   2882-2939   Complement control module/SCR domain  
  0.0000000000000101   2222-2289   Complement control module/SCR domain  
  0.0000000000000264   426-494   Complement control module/SCR domain  
  0.0000000000000278   944-1014   Complement control module/SCR domain  
  0.0000000000000347   256-317   Complement control module/SCR domain  
  0.0000000000000403   2580-2642   Complement control module/SCR domain  
  0.0000000000000556   2350-2412   Complement control module/SCR domain  
  0.0000000000000931   1293-1357   Complement control module/SCR domain  
  0.000000000000138   76-149   Complement control module/SCR domain  
  0.000000000000162   601-661   Complement control module/SCR domain  
  0.000000000000167   1815-1884   Complement control module/SCR domain  
  0.000000000000202   2160-2233   Complement control module/SCR domain  
  0.000000000000472   1469-1532   Complement control module/SCR domain  
  0.00000000000162   1643-1707   Complement control module/SCR domain  
  0.00000000000391   1986-2050   Complement control module/SCR domain  
  0.0000000000229   774-834   Complement control module/SCR domain  
  0.0000000000486   3003-3060   Complement control module/SCR domain  
  0.00000000125   2304-2360   Complement control module/SCR domain  
ENSGGOP00000000923   6.25e-16   317-383   Complement control module/SCR domain  
  0.00000000000000104   262-328   Complement control module/SCR domain  
  0.00000000000000167   565-630   Complement control module/SCR domain  
  0.00000000000000306   200-267   Complement control module/SCR domain  
  0.0000000000000032   441-507   Complement control module/SCR domain  
  0.00000000000000486   503-569   Complement control module/SCR domain  
  0.0000000000000195   378-445   Complement control module/SCR domain  
  0.0000000000000862   642-707   Complement control module/SCR domain  
  0.000000000000542   697-762   Complement control module/SCR domain  
ENSGGOP00000001438   0.0000000000000639   365-435   Complement control module/SCR domain  
  0.00000000000945   304-368   Complement control module/SCR domain  
ENSGGOP00000001872   3.89e-17   723-780   Complement control module/SCR domain  
ENSGGOP00000002618   0.000000000153   1526-1600   Complement control module/SCR domain  
  0.00000514   1592-1649   Complement control module/SCR domain  
  0.0000195   1469-1532   Complement control module/SCR domain  
  0.00316   1417-1467   Complement control module/SCR domain  
ENSGGOP00000003401   7.64e-19   525-594   Complement control module/SCR domain  
  1.36e-16   274-343   Complement control module/SCR domain  
  3.34e-16   776-838   Complement control module/SCR domain  
  8.48e-16   409-472   Complement control module/SCR domain  
  9.73e-16   349-419   Complement control module/SCR domain  
  0.0000000000000011   910-974   Complement control module/SCR domain  
  0.00000000000000195   153-224   Complement control module/SCR domain  
  0.000000000000005   661-723   Complement control module/SCR domain  
  0.0000000000000167   600-670   Complement control module/SCR domain  
  0.000000000000089   21-83   Complement control module/SCR domain  
  0.000000000000625   88-149   Complement control module/SCR domain  
  0.000000000000653   964-1028   Complement control module/SCR domain  
  0.00000000000403   845-904   Complement control module/SCR domain  
  0.00000000000973   214-285   Complement control module/SCR domain  
  0.0000000361   740-787   Complement control module/SCR domain  
  0.00000264   490-536   Complement control module/SCR domain  
ENSGGOP00000003423   1.1e-18   34-102   Complement control module/SCR domain  
  2.7e-16   167-229   Complement control module/SCR domain  
  4.73e-16   289-358   Complement control module/SCR domain  
  0.000000000000175   109-171   Complement control module/SCR domain  
  0.000000000000498   232-300   Complement control module/SCR domain  
ENSGGOP00000004080   1.81e-19   2147-2216   Complement control module/SCR domain  
  4.03e-18   2834-2903   Complement control module/SCR domain  
  8.9e-18   3242-3311   Complement control module/SCR domain  
  1.08e-17   2776-2845   Complement control module/SCR domain  
  1.95e-17   1964-2032   Complement control module/SCR domain  
  2.78e-17   2382-2452   Complement control module/SCR domain  
  3.61e-17   1848-1917   Complement control module/SCR domain  
  6.81e-17   2266-2334   Complement control module/SCR domain  
  1.1e-16   1790-1859   Complement control module/SCR domain  
  1.36e-16   1691-1749   Complement control module/SCR domain  
  1.39e-16   2892-2961   Complement control module/SCR domain  
  4.17e-16   2557-2624   Complement control module/SCR domain  
  4.45e-16   2674-2729   Complement control module/SCR domain  
  0.00000000000000107   1906-1971   Complement control module/SCR domain  
  0.00000000000000153   2719-2781   Complement control module/SCR domain  
  0.00000000000000222   3419-3478   Complement control module/SCR domain  
  0.00000000000000236   2441-2510   Complement control module/SCR domain  
  0.00000000000000375   3301-3367   Complement control module/SCR domain  
  0.00000000000000959   2499-2560   Complement control module/SCR domain  
  0.0000000000000236   2951-3013   Complement control module/SCR domain  
  0.0000000000000236   437-504   Complement control module/SCR domain  
  0.00000000000005   3066-3128   Complement control module/SCR domain  
  0.0000000000000945   1634-1702   Complement control module/SCR domain  
  0.000000000000486   376-447   Complement control module/SCR domain  
  0.00000000000106   2325-2393   Complement control module/SCR domain  
  0.00000000000125   2207-2271   Complement control module/SCR domain  
  0.00000000000222   3010-3076   Complement control module/SCR domain  
  0.00000000000334   2021-2089   Complement control module/SCR domain  
  0.00000000000723   3360-3428   Complement control module/SCR domain  
  0.0000000000208   3124-3187   Complement control module/SCR domain  
  0.000000000208   3184-3247   Complement control module/SCR domain  
  0.000000000334   2086-2153   Complement control module/SCR domain  
  0.00000556   496-553   Complement control module/SCR domain  
  0.000903   727-789   Complement control module/SCR domain  
ENSGGOP00000004167   0.000000000514   741-797   Complement control module/SCR domain  
ENSGGOP00000004389   0.00000000208   102-158   Complement control module/SCR domain  
  0.00000375   55-102   Complement control module/SCR domain  
ENSGGOP00000004876   0.0000000000000148   745-810   Complement control module/SCR domain  
  0.000000000000709   804-866   Complement control module/SCR domain  
  0.00000000000119   872-931   Complement control module/SCR domain  
  0.0000000000347   392-453   Complement control module/SCR domain  
  0.000000000944   567-631   Complement control module/SCR domain  
ENSGGOP00000005155   0.00000000000639   2267-2327   Complement control module/SCR domain  
ENSGGOP00000005722   0.00000000000000236   243-308   Complement control module/SCR domain  
  0.00000000000000598   367-440   Complement control module/SCR domain  
  0.0000000000000108   181-246   Complement control module/SCR domain  
  0.000000000000012   303-377   Complement control module/SCR domain  
  0.0000000000000375   424-491   Complement control module/SCR domain  
  0.00000000000121   489-550   Complement control module/SCR domain  
ENSGGOP00000006210   4.99e-21   3165-3236   Complement control module/SCR domain  
  7.29e-19   2810-2878   Complement control module/SCR domain  
  3.75e-18   3049-3117   Complement control module/SCR domain  
  3.78e-18   2867-2935   Complement control module/SCR domain  
  4.05e-18   2925-2998   Complement control module/SCR domain  
  5.84e-18   3106-3176   Complement control module/SCR domain  
  8.36e-17   3225-3294   Complement control module/SCR domain  
  2.22e-16   2751-2820   Complement control module/SCR domain  
  0.00000000000000189   2217-2286   Complement control module/SCR domain  
  0.00000000000000208   2624-2691   Complement control module/SCR domain  
  0.0000000000000025   3284-3340   Complement control module/SCR domain  
  0.00000000000000347   3345-3413   Complement control module/SCR domain  
  0.00000000000000459   2981-3042   Complement control module/SCR domain  
  0.00000000000000528   479-550   Complement control module/SCR domain  
  0.00000000000000607   2045-2107   Complement control module/SCR domain  
  0.0000000000000181   2562-2635   Complement control module/SCR domain  
  0.0000000000000432   1521-1585   Complement control module/SCR domain  
  0.0000000000000737   1003-1063   Complement control module/SCR domain  
  0.0000000000001   1694-1759   Complement control module/SCR domain  
  0.000000000000139   657-716   Complement control module/SCR domain  
  0.00000000000032   1871-1937   Complement control module/SCR domain  
  0.000000000000405   1176-1238   Complement control module/SCR domain  
  0.000000000000513   177-238   Complement control module/SCR domain  
  0.00000000000133   1347-1409   Complement control module/SCR domain  
  0.00000000000222   3404-3462   Complement control module/SCR domain  
  0.00000000000364   828-896   Complement control module/SCR domain  
  0.00000000000528   2698-2762   Complement control module/SCR domain  
  0.0000000000702   2388-2451   Complement control module/SCR domain  
ENSGGOP00000006962   0.000000000389   1296-1359   Complement control module/SCR domain  
  0.00000000403   1232-1304   Complement control module/SCR domain  
  0.0000000195   1170-1240   Complement control module/SCR domain  
  0.00000389   1101-1174   Complement control module/SCR domain  
ENSGGOP00000008050   0.0000000000634   644-707   Complement control module/SCR domain  
  0.0000000607   699-754   Complement control module/SCR domain  
ENSGGOP00000008716   0.000000000264   31-93   Complement control module/SCR domain  
ENSGGOP00000009051   1.14e-20   260-341   Complement control module/SCR domain  
  7.51e-17   85-151   Complement control module/SCR domain  
  0.00000000000653   142-203   Complement control module/SCR domain  
ENSGGOP00000009768   0.0000000000000057   116-178   Complement control module/SCR domain  
  0.0000000000000389   263-322   Complement control module/SCR domain  
  0.0000000306   78-126   Complement control module/SCR domain  
ENSGGOP00000011257   0.0000389   192-238   Complement control module/SCR domain  
ENSGGOP00000011951   2.88e-16   131-193   Complement control module/SCR domain  
  0.0000000000000139   80-148   Complement control module/SCR domain  
  0.0000000000917   22-87   Complement control module/SCR domain  
ENSGGOP00000011960   2.36e-16   122-194   Complement control module/SCR domain  
  0.00000000000000153   183-246   Complement control module/SCR domain  
  0.000000000000038   244-306   Complement control module/SCR domain  
  0.000000000000553   438-500   Complement control module/SCR domain  
  0.00000000000542   494-553   Complement control module/SCR domain  
  0.000000000891   57-126   Complement control module/SCR domain  
  0.00000000128   311-380   Complement control module/SCR domain  
  0.000000216   397-442   Complement control module/SCR domain  
ENSGGOP00000012056   3.8e-22   1165-1229   Complement control module/SCR domain  
  0.0000000000000653   138-207   Complement control module/SCR domain  
  0.000000000000607   1108-1167   Complement control module/SCR domain  
  0.00000000000101   688-743   Complement control module/SCR domain  
  0.00000000000113   1040-1102   Complement control module/SCR domain  
  0.00000000000229   85-146   Complement control module/SCR domain  
  0.00000000000256   866-926   Complement control module/SCR domain  
  0.00000000000288   628-685   Complement control module/SCR domain  
  0.0000000000031   923-984   Complement control module/SCR domain  
  0.0000000000959   981-1042   Complement control module/SCR domain  
  0.00000000131   808-863   Complement control module/SCR domain  
  0.00000000131   560-623   Complement control module/SCR domain  
  0.0000000104   267-329   Complement control module/SCR domain  
  0.0000000301   28-89   Complement control module/SCR domain  
  0.0000000301   454-506   Complement control module/SCR domain  
  0.0000000836   387-445   Complement control module/SCR domain  
  0.00021   324-384   Complement control module/SCR domain  
  0.0148   531-571   Complement control module/SCR domain  
  0.0243   751-802   Complement control module/SCR domain  
ENSGGOP00000012062   0.00000000000000264   710-775   Complement control module/SCR domain  
  0.000000000000564   769-831   Complement control module/SCR domain  
  0.00000000000403   356-421   Complement control module/SCR domain  
  0.0000000000236   836-896   Complement control module/SCR domain  
  0.000000000222   532-596   Complement control module/SCR domain  
ENSGGOP00000012180   0.0000000000000162   5-65   Complement control module/SCR domain  
ENSGGOP00000012319   0.000000000000347   177-247   Complement control module/SCR domain  
  0.00000000011   237-297   Complement control module/SCR domain  
ENSGGOP00000012454   0.00000000000695   644-714   Complement control module/SCR domain  
ENSGGOP00000013103   3.57e-19   529-591   Complement control module/SCR domain  
  0.0000000000005   472-531   Complement control module/SCR domain  
  0.00000000000101   228-285   Complement control module/SCR domain  
  0.0000000000834   289-345   Complement control module/SCR domain  
  0.000000000236   410-465   Complement control module/SCR domain  
  0.00000000123   169-225   Complement control module/SCR domain  
  0.0000000341   108-165   Complement control module/SCR domain  
  0.00000445   46-113   Complement control module/SCR domain  
  0.000445   352-404   Complement control module/SCR domain  
ENSGGOP00000013497   8.48e-16   26-93   Complement control module/SCR domain  
ENSGGOP00000014984   0.00000000000000848   365-435   Complement control module/SCR domain  
  0.0000000000000181   299-368   Complement control module/SCR domain  
ENSGGOP00000015240   0.00000000000000931   289-351   Complement control module/SCR domain  
  0.000000000000144   643-701   Complement control module/SCR domain  
  0.000000000000222   703-764   Complement control module/SCR domain  
  0.00000000000301   771-837   Complement control module/SCR domain  
  0.0000000511   464-529   Complement control module/SCR domain  
ENSGGOP00000015676   0.000000000126   3306-3364   Complement control module/SCR domain  
ENSGGOP00000016059   1.83e-20   583-662   Complement control module/SCR domain  
  5.37e-20   455-535   Complement control module/SCR domain  
  0.0000000000000144   207-269   Complement control module/SCR domain  
  0.000000000000275   335-391   Complement control module/SCR domain  
  0.00000000000288   398-457   Complement control module/SCR domain  
  0.00000000000813   275-329   Complement control module/SCR domain  
  0.000000000032   524-580   Complement control module/SCR domain  
  0.00000000577   155-215   Complement control module/SCR domain  
  0.0000000446   92-149   Complement control module/SCR domain  
  0.00000354   26-96   Complement control module/SCR domain  
ENSGGOP00000017297   0.000000000000959   213-277   Complement control module/SCR domain  
  0.0000000000011   273-335   Complement control module/SCR domain  
ENSGGOP00000017308   0.0000000000000667   25-80   Complement control module/SCR domain  
  0.0000000000917   94-153   Complement control module/SCR domain  
  0.00126   4-30   Complement control module/SCR domain  
ENSGGOP00000017311   1.81e-19   2147-2216   Complement control module/SCR domain  
  4.03e-18   2834-2903   Complement control module/SCR domain  
  8.9e-18   3242-3311   Complement control module/SCR domain  
  1.08e-17   2776-2845   Complement control module/SCR domain  
  1.95e-17   1964-2032   Complement control module/SCR domain  
  2.78e-17   2382-2452   Complement control module/SCR domain  
  3.61e-17   1848-1917   Complement control module/SCR domain  
  6.81e-17   2266-2334   Complement control module/SCR domain  
  1.1e-16   1790-1859   Complement control module/SCR domain  
  1.36e-16   1691-1749   Complement control module/SCR domain  
  1.39e-16   2892-2961   Complement control module/SCR domain  
  4.17e-16   2557-2624   Complement control module/SCR domain  
  4.45e-16   2674-2729   Complement control module/SCR domain  
  0.00000000000000107   1906-1971   Complement control module/SCR domain  
  0.00000000000000153   2719-2781   Complement control module/SCR domain  
  0.00000000000000222   3419-3478   Complement control module/SCR domain  
  0.00000000000000236   2441-2510   Complement control module/SCR domain  
  0.00000000000000375   3301-3367   Complement control module/SCR domain  
  0.00000000000000959   2499-2560   Complement control module/SCR domain  
  0.0000000000000236   2951-3013   Complement control module/SCR domain  
  0.0000000000000236   437-504   Complement control module/SCR domain  
  0.00000000000005   3066-3128   Complement control module/SCR domain  
  0.0000000000000945   1634-1702   Complement control module/SCR domain  
  0.000000000000486   376-447   Complement control module/SCR domain  
  0.00000000000106   2325-2393   Complement control module/SCR domain  
  0.00000000000125   2207-2271   Complement control module/SCR domain  
  0.00000000000222   3010-3076   Complement control module/SCR domain  
  0.00000000000334   2021-2089   Complement control module/SCR domain  
  0.00000000000723   3360-3428   Complement control module/SCR domain  
  0.0000000000208   3124-3187   Complement control module/SCR domain  
  0.000000000208   3184-3247   Complement control module/SCR domain  
  0.000000000334   2086-2153   Complement control module/SCR domain  
  0.00000556   496-553   Complement control module/SCR domain  
  0.000903   727-789   Complement control module/SCR domain  
ENSGGOP00000018616   7.09e-18   2614-2683   Complement control module/SCR domain  
  1.15e-17   3032-3100   Complement control module/SCR domain  
  2.22e-17   2855-2922   Complement control module/SCR domain  
  8.63e-17   2672-2739   Complement control module/SCR domain  
  1.05e-16   2971-3037   Complement control module/SCR domain  
  5.8e-16   3151-3219   Complement control module/SCR domain  
  7.64e-16   2912-2982   Complement control module/SCR domain  
  0.00000000000000107   342-414   Complement control module/SCR domain  
  0.00000000000000639   2425-2498   Complement control module/SCR domain  
  0.000000000000013   2081-2149   Complement control module/SCR domain  
  0.0000000000000229   2488-2555   Complement control module/SCR domain  
  0.0000000000000264   138-199   Complement control module/SCR domain  
  0.0000000000000403   1908-1970   Complement control module/SCR domain  
  0.0000000000000486   2732-2799   Complement control module/SCR domain  
  0.000000000000153   1384-1447   Complement control module/SCR domain  
  0.000000000000181   2788-2848   Complement control module/SCR domain  
  0.000000000000202   1209-1272   Complement control module/SCR domain  
  0.000000000000208   3083-3145   Complement control module/SCR domain  
  0.000000000000222   866-926   Complement control module/SCR domain  
  0.000000000000405   1557-1624   Complement control module/SCR domain  
  0.000000000000542   520-582   Complement control module/SCR domain  
  0.00000000000306   2251-2315   Complement control module/SCR domain  
  0.00000000000445   1734-1797   Complement control module/SCR domain  
  0.00000000000473   691-759   Complement control module/SCR domain  
  0.00000000000778   3210-3269   Complement control module/SCR domain  
  0.00000000000863   1039-1101   Complement control module/SCR domain  
  0.0000000000133   2560-2625   Complement control module/SCR domain  
ENSGGOP00000018748   4.17e-16   98-171   Complement control module/SCR domain  
  7.78e-16   223-287   Complement control module/SCR domain  
  0.0000000000011   155-225   Complement control module/SCR domain  
  0.0000000124   35-89   Complement control module/SCR domain  
ENSGGOP00000019004   0.0000000000000126   300-370   Complement control module/SCR domain  
  0.0000595   367-423   Complement control module/SCR domain  
ENSGGOP00000019528   0.000000000000588   28-92   Complement control module/SCR domain  
ENSGGOP00000020741   0.0000000000000195   261-319   Complement control module/SCR domain  
  0.0000000000000208   114-175   Complement control module/SCR domain  
  0.000000000667   77-129   Complement control module/SCR domain  
ENSGGOP00000020809   0.0000000000000876   297-367   Complement control module/SCR domain  
ENSGGOP00000022275   0.000000000431   813-872   Complement control module/SCR domain  
ENSGGOP00000022304   0.000000000000195   176-235   Complement control module/SCR domain  
  0.00000000027   239-300   Complement control module/SCR domain  
  0.00000000111   52-108   Complement control module/SCR domain  
  0.0000000125   113-174   Complement control module/SCR domain  
ENSGGOP00000022837   0.00000000000742   124-184   Complement control module/SCR domain  
  0.000000000681   23-82   Complement control module/SCR domain  
ENSGGOP00000023483   0.00000000000973   562-625   Complement control module/SCR domain  
  0.0000000292   617-673   Complement control module/SCR domain  
ENSGGOP00000024143   0.0000000382   91-152   Complement control module/SCR domain  
  0.000000043   32-95   Complement control module/SCR domain  
ENSGGOP00000027405   9.31e-19   162-234   Complement control module/SCR domain  
  3.37e-16   223-284   Complement control module/SCR domain  
  0.0000000000111   98-172   Complement control module/SCR domain  
  0.0000000000216   36-102   Complement control module/SCR domain  
ENSGGOP00000027506   0.00000000000334   27-79   Complement control module/SCR domain  
  0.00000000917   93-153   Complement control module/SCR domain  
  0.0403   3-30   Complement control module/SCR domain  
ENSGGOP00000028096   0.0000000000000598   552-613   Complement control module/SCR domain  
  0.0000000000012   619-675   Complement control module/SCR domain  
  0.00000000000181   83-143   Complement control module/SCR domain  
  0.00000556   499-539   Complement control module/SCR domain  
  0.0000292   23-92   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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