Select to display Genome Domains Proteins No ALL 101796 101796 No Homo sapiens 76_38 Human 52 15 No Pan troglodytes 76_2.1.4 Chimpanzee 22 4 No Gorilla gorilla 76_3.1 Western gorilla 33 6 No Pongo abelii 76_2 Sumatran orangutan 22 4 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 21 4 No Papio anubis 76 Olive baboon 22 4 No Macaca mulatta 76_1 Rhesus monkey 43 10 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 41 9 No Otolemur garnettii 76_3 Small-eared galago 22 4 No Microcebus murinus 76_1 Gray mouse lemur 21 4 No Rattus norvegicus 76_5.0 Norway rat 22 4 No Mus musculus 76_38 House mouse 37 9 No Dipodomys ordii 76_1 Ord's kangaroo rat 19 4 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 22 4 No Heterocephalus glaber v1.7-2 Naked mole-rat 23 4 No Cavia porcellus 76_3 Domestic guinea pig 21 4 No Oryctolagus cuniculus 76_2 Rabbit 22 4 No Ochotona princeps 76 American pika 22 4 No Tupaia belangeri 76 Northern tree shrew 12 3 No Sus scrofa 76_10.2 Pig 23 5 No Bos taurus 76_3.1 Cattle 26 5 No Ovis aries 76_3.1 Sheep 27 7 No Vicugna pacos 76_1 Alpaca 13 3 No Tursiops truncatus 76_1 Bottlenose dolphin 22 4 No Mustela putorius furo 76_1.0 Domestic ferret 22 4 No Ailuropoda melanoleuca 76_1 Giant panda 27 6 No Canis familiaris 76_3.1 Dog 31 7 No Felis catus 76_6.2 Domestic cat 22 4 No Equus caballus 76_2 Horse 26 5 No Myotis lucifugus 76_2.0 Little brown bat 22 4 No Pteropus vampyrus 76_1 Large flying fox 22 4 No Sorex araneus 76_1 European shrew 16 4 No Erinaceus europaeus 76 Western European hedgehog 13 3 No Procavia capensis 76_1 Cape rock hyrax 21 4 No Loxodonta africana 76_3 African savanna elephant 21 5 No Echinops telfairi 76 Small Madagascar hedgehog 14 4 No Dasypus novemcinctus 76_2 Nine-banded armadillo 29 6 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 4 No Macropus eugenii 76_1.0 Tammar wallaby 23 4 No Sarcophilus harrisii 76_7.0 Tasmanian devil 21 5 No Monodelphis domestica 76_5 Gray short-tailed opossum 22 4 No Ornithorhynchus anatinus 76_5 Platypus 22 4 No Saccoglossus kowalevskii v3.0 13 6 No Petromyzon marinus 76_7.0 Sea lamprey 8 3 No Meleagris gallopavo 76_2 Turkey 21 4 No Gallus gallus 76_4 Chicken 25 5 No Anas platyrhynchos 76_1.0 Mallard 22 4 No Taeniopygia guttata 76_3.2.4 Zebra finch 30 7 No Ficedula albicollis 76_1.0 Collared flycatcher 26 5 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 27 7 No Anolis carolinensis 76_2.0 Green anole 22 4 No Xenopus laevis African clawed frog 8 2 No Xenopus tropicalis 76_4.2 Tropical clawed frog 15 3 No Latimeria chalumnae 76_1 Coelacanth 21 4 No Lepisosteus oculatus 76 Spotted gar 21 4 No Gadus morhua 76_1 Atlantic cod 17 5 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 34 10 No Takifugu rubripes 76_4 Torafugu 53 11 No Gasterosteus aculeatus 76_1 Three-spined stickleback 30 8 No Oryzias latipes 76_1 Japanese medaka 30 6 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 19 4 No Poecilia formosa 76 Amazon molly 19 4 No Oreochromis niloticus 76_1.0 Nile tilapia 41 8 No Astyanax mexicanus 76 Mexican tetra 26 5 No Danio rerio 76_9 Zebrafish 53 11 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 12 2 No Ciona intestinalis 76 Vase tunicate 7 3 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 28 12 No Adineta vaga 8 5 No Octopus bimaculoides 280 27 14 No Crassostrea gigas 22 Pacific oyster 53 21 No Lottia gigantea Owl limpet 29 9 No Helobdella robusta 3 1 No Capitella sp. I 7 2 No Danaus plexippus OGS1.0 Monarch butterfly 6 2 No Heliconius melpomene Postman butterfly 6 2 No Bombyx mori Domestic silkworm 6 3 No Nasonia vitripennis Jewel wasp 6 2 No Apis mellifera 38.2d (Not maintained) Honey bee 16 9 No Harpegnathos saltator v3.3 Jerdon's jumping ant 3 2 No Linepithema humile v1.1 Argentine ant 5 3 No Pogonomyrmex barbatus v1.2 Red harvester ant 7 5 No Solenopsis invicta v.2.2.3 Red fire ant 6 4 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 5 4 No Atta cephalotes v1.1 7 5 No Camponotus floridanus v3.3 Florida carpenter ant 5 3 No Lucilia cuprina Australian sheep blowfly 10 4 No Drosophila grimshawi 1.3 16 5 No Drosophila willistoni 1.3 12 4 No Drosophila pseudoobscura 2.13 12 4 No Drosophila persimilis 1.3 6 2 No Drosophila suzukii 12 4 No Drosophila yakuba 1.3 12 4 No Drosophila simulans 1.3 10 4 No Drosophila sechellia 1.3 11 5 No Drosophila melanogaster 76_5 Fruit fly 100 27 No Drosophila erecta 1.3 12 4 No Drosophila ananassae 1.3 12 4 No Drosophila virilis 1.2 12 4 No Drosophila mojavensis 1.3 12 4 No Megaselia scalaris 22 4 2 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 16 6 No Culex pipiens quinquefasciatus Southern house mosquito 10 4 No Anopheles darlingi 22 American malaria mosquito 6 3 No Anopheles gambiae 49_3j African malaria mosquito 12 4 No Tribolium castaneum 3.0 Red flour beetle 16 6 No Pediculus humanus corporis Human body louse 9 3 No Acyrthosiphon pisum Pea aphid 6 2 No Rhodnius prolixus 22 18 7 No Daphnia pulex Common water flea 69 34 No Strigamia maritima 22 18 6 No Sarcoptes scabiei 8 4 No Tetranychus urticae Two-spotted spider mite 21 6 No Ixodes scapularis Black-legged tick 15 8 No Pristionchus pacificus 7 3 No Meloidogyne incognita Southern root-knot nematode 5 2 No Onchocerca volvulus 22 5 2 No Brugia malayi WS250 Agent of lymphatic filariasis 8 3 No Caenorhabditis japonica 3 1 No Caenorhabditis brenneri 6 2 No Caenorhabditis remanei 3 1 No Caenorhabditis elegans 76_235 Roundworm 5 2 No Caenorhabditis briggsae 2 3 1 No Trichinella spiralis 22 7 2 No Hymenolepis microstoma 10 4 No Echinococcus multilocularis 8 3 No Echinococcus granulosus 9 3 No Taenia solium Pork tapeworm 9 3 No Schistosoma mansoni 9 3 No Acropora digitifera v1.0 14 6 No Nematostella vectensis 1.0 Starlet sea anemone 19 6 No Hydra vulgaris 9 5 No Amphimedon queenslandica 10 5 No Proterospongia sp. ATCC 50818 18 8 No Monosiga brevicollis 28 10 No Sphaeroforma arctica JP610 15 9 No Capsaspora owczarzaki ATCC 30864 10 1 No Conidiobolus coronatus NRRL28638 v1.0 8 3 No Mortierella verticillata NRRL 6337 7 2 No Phycomyces blakesleeanus 16 5 No Rhizopus oryzae RA 99-880 33 11 No Mucor circinelloides 25 9 No Rhizomucor miehei CAU432 18 6 No Malassezia globosa CBS 7966 8 2 No Sporisorium reilianum 22 11 4 No Ustilago maydis 11 4 No Mixia osmundae IAM 14324 v1.0 15 7 No Cronartium quercuum f. sp. fusiforme G11 v1.0 11 5 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 9 3 No Melampsora laricis-populina 10 4 No Rhodotorula graminis WP1 v1.0 7 2 No Sporobolomyces roseus IAM 13481 7 2 No Microbotryum violaceum 22 7 3 No Wallemia sebi v1.0 10 4 No Sphaerobolus stellatus v1.0 4 3 No Piloderma croceum F 1598 v1.0 11 5 No Serpula lacrymans var. lacrymans S7.9 10 4 No Coniophora puteana 10 4 No Hydnomerulius pinastri v2.0 13 7 No Paxillus rubicundulus Ve08.2h10 v1.0 10 4 No Pisolithus microcarpus 441 v1.0 8 3 No Pisolithus tinctorius Marx 270 v1.0 9 4 No Scleroderma citrinum Foug A v1.0 8 3 No Coprinopsis cinerea okayama7 130 v3 18 8 No Pleurotus ostreatus Oyster mushroom 12 6 No Amanita thiersii Skay4041 v1.0 10 4 No Amanita muscaria Koide v1.0 Fly agaric 8 3 No Galerina marginata v1.0 12 5 No Hebeloma cylindrosporum h7 v2.0 10 4 No Laccaria bicolor S238N-H82 10 4 No Agaricus bisporus var. bisporus 10 4 No Schizophyllum commune 9 4 No Stereum hirsutum FP-91666 SS1 v1.0 10 4 No Heterobasidion annosum 7 3 No Gloeophyllum trabeum v1.0 10 5 No Punctularia strigosozonata v1.0 8 3 No Sebacina vermifera MAFF 305830 v1.0 12 6 No Fomitiporia mediterranea v1.0 10 4 No Tulasnella calospora AL13/4D v1.0 8 3 No Postia placenta 12 6 No Wolfiporia cocos MD-104 SS10 v1.0 10 5 No Fomitopsis pinicola v1.0 8 3 No Fomitopsis pinicola FP-58527 SS1 v3.0 8 3 No Phanerochaete chrysosporium RP-78 2.1 14 6 No Dichomitus squalens 10 4 No Trametes versicolor v1.0 10 5 No Tremella mesenterica Witches' butter 14 6 No Daldinia eschscholzii EC12 v1.0 6 4 No Apiospora montagnei NRRL 25634 v1.0 9 5 No Magnaporthe poae ATCC 64411 22 13 9 No Magnaporthe grisea 70-15 6 3 No Podospora anserina 11 6 No Sporotrichum thermophile ATCC 42464 6 3 No Thielavia terrestris NRRL 8126 9 5 No Chaetomium globosum CBS 148.51 9 6 No Neurospora tetrasperma 4 3 No Neurospora discreta FGSC 8579 6 4 No Neurospora crassa OR74A 6 4 No Cryphonectria parasitica Chestnut blight fungus 5 3 No Verticillium albo-atrum VaMs.102 16 9 No Verticillium dahliae VdLs.17 16 9 No Acremonium alcalophilum v 1.0 7 4 No Glomerella graminicola 22 17 9 No Fusarium graminearum 13 8 No Nectria haematococca mpVI 12 7 No Fusarium oxysporum f. sp. lycopersici 4286 13 9 No Fusarium verticillioides 7600 13 8 No Trichoderma asperellum CBS 433.97 v1.0 6 4 No Trichoderma atroviride 7 5 No Trichoderma citrinoviride v1.0 7 4 No Trichoderma reesei 1.2 7 4 No Trichoderma virens Gv29-8 7 5 No Trichoderma longibrachiatum ATCC 18648 v1.0 5 3 No Trichoderma harzianum CBS 226.95 v1.0 7 5 No Amorphotheca resinae v1.0 Creosote fungus 7 4 No Botrytis cinerea B05.10 5 3 No Sclerotinia sclerotiorum 5 3 No Blumeria graminis 22 1 1 No Didymella exigua CBS 183.55 v1.0 9 5 No Leptosphaeria maculans 22 6 5 No Setosphaeria turcica v1.0 7 4 No Cochliobolus miyabeanus ATCC 44560 v1.0 9 5 No Cochliobolus victoriae FI3 v1.0 9 5 No Cochliobolus carbonum 26-R-13 v1.0 9 5 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 9 5 No Alternaria brassicicola 7 4 No Cochliobolus lunatus m118 v2.0 9 5 No Pyrenophora teres f. teres 22 7 4 No Pyrenophora tritici-repentis 7 4 No Stagonospora nodorum 12 7 No Mycosphaerella graminicola IPO323 11 6 No Zasmidium cellare ATCC 36951 v1.0 13 7 No Dothistroma septosporum 5 3 No Septoria musiva v1.0 5 3 No Mycosphaerella fijiensis CIRAD86 7 4 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 7 4 No Paracoccidioides brasiliensis Pb18 3 2 No Coccidioides posadasii RMSCC 3488 3 2 No Coccidioides immitis RS 3 2 No Ajellomyces dermatitidis SLH14081 4 3 No Histoplasma capsulatum class NAmI strain WU24 5 3 No Microsporum canis CBS 113480 5 3 No Trichophyton equinum CBS 127.97 5 3 No Trichophyton verrucosum HKI 0517 5 3 No Arthroderma benhamiae CBS 112371 5 3 No Trichophyton tonsurans CBS 112818 5 3 No Trichophyton rubrum CBS 118892 5 3 No Uncinocarpus reesii 1704 5 3 No Aspergillus zonatus v1.0 3 2 No Penicillium chrysogenum Wisconsin 54-1255 3 2 No Penicillium chrysogenum v1.0 3 2 No Aspergillus acidus v1.0 6 5 No Aspergillus fumigatus Af293 4 3 No Aspergillus brasiliensis v1.0 7 5 No Aspergillus nidulans FGSC A4 3 2 No Aspergillus sydowii v1.0 6 4 No Aspergillus versicolor v1.0 6 4 No Aspergillus glaucus 3 2 No Aspergillus carbonarius ITEM 5010 3 2 No Neosartorya fischeri NRRL 181 4 3 No Aspergillus terreus NIH2624 3 2 No Aspergillus tubingensis v1.0 7 5 No Aspergillus wentii v1.0 3 2 No Aspergillus oryzae RIB40 3 2 No Aspergillus niger 22 7 5 No Aspergillus niger ATCC 1015 7 5 No Aspergillus flavus NRRL3357 3 2 No Aspergillus clavatus NRRL 1 3 2 No Penicillium marneffei ATCC 18224 5 3 No Tuber melanosporum Mel28 22 8 5 No Tuber melanosporum Vittad Perigord truffle 11 7 No Hansenula polymorpha v2.0 5 2 No Dekkera bruxellensis CBS 2499 v2.0 5 2 No Pichia membranifaciens v1.0 2 1 No Candida tanzawaensis NRRL Y-17324 v1.0 3 2 No Candida dubliniensis CD36 2 1 No Candida tropicalis MYA-3404 2 1 No Candida parapsilosis 3 2 No Candida albicans SC5314 2 1 No Lodderomyces elongisporus NRRL YB-4239 3 2 No Babjeviella inositovora NRRL Y-12698 v1.0 3 2 No Pichia stipitis CBS 6054 3 2 No Candida guilliermondii ATCC 6260 3 2 No Hyphopichia burtonii NRRL Y-1933 v1.0 4 2 No Debaromyces hansenii 3 2 No Wickerhamomyces anomalus 5 2 No Pichia pastoris GS115 5 2 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 2 1 No Yarrowia lipolytica CLIB122 5 2 No Candida lusitaniae ATCC 42720 4 3 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 3 2 No Vanderwaltozyma polyspora DSM 70294 4 2 No Candida glabrata CBS138 4 2 No Kluyveromyces thermotolerans CBS 6340 4 2 No Lachancea kluyveri 4 2 No Kluyveromyces waltii 5 2 No Ashbya gossypii ATCC 10895 4 2 No Zygosaccharomyces rouxii 3 1 No Saccharomyces mikatae MIT 4 1 No Saccharomyces paradoxus MIT 3 2 No Saccharomyces cerevisiae 76 Baker's yeast 4 1 No Saccharomyces bayanus MIT 4 1 No Kluyveromyces lactis 6 2 No Schizosaccharomyces cryophilus OY26 22 4 2 No Schizosaccharomyces octosporus yFS286 4 2 No Schizosaccharomyces japonicus yFS275 4 2 No Schizosaccharomyces pombe Fission yeast 4 2 No Catenaria anguillulae PL171 v1.0 4 2 No Allomyces macrogynus ATCC 38327 7 6 No Spizellomyces punctatus DAOM BR117 7 4 No Selaginella moellendorffii 26 17 No Pinus taeda Loblolly pine 19 13 No Picea abies Norway spruce 23 15 No Eucalyptus grandis v201 Rose gum 40 27 No Theobroma cacao B97-61/B2 v1 Cacao 35 24 No Gossypium raimondii v221 57 40 No Citrus clementina v165 37 26 No Citrus sinensis v154 Sweet orange 35 24 No Thellungiella halophila v173 37 25 No Brassica rapa Chiifu-401 1.2 Field mustard 61 43 No Capsella rubella v183 38 26 No Arabidopsis lyrata Lyrate rockcress 36 25 No Arabidopsis thaliana 10 Thale cress 38 26 No Carica papaya Papaya 30 20 No Medicago truncatula Barrel medic 62 46 No Phaseolus vulgaris v186 French bean 57 46 No Glycine max v109 Soybean 100 78 No Cucumis sativus v122 Cucumber 37 26 No Fragaria vesca Wild strawberry 47 33 No Malus domestica v196 Apple 59 44 No Prunus persica v139 Peach 36 27 No Linum usitatissimum v200 Flax 69 56 No Manihot esculenta v147 Cassava 52 39 No Populus trichocarpa v156 Black cottonwood 79 61 No Vitis vinifera Wine grape 23 17 No Mimulus guttatus v140 Spotted monkey flower 41 28 No Solanum lycopersicum v.2.3 Tomato 37 26 No Solanum tuberosum Potato 47 34 No Actinidia chinensis Hongyang 61 41 No Aquilegia coerulea v195 38 29 No Triticum urartu 22 19 15 No Triticum aestivum 22 Bread wheat 47 39 No Aegilops tauschii 22 31 26 No Brachypodium distachyon Stiff brome 38 28 No Oryza barthii 22 African wild rice 31 26 No Oryza meridionalis 22 37 26 No Oryza glumaepatula 22 40 30 No Oryza glaberrima African rice 38 29 No Oryza punctata 22 41 29 No Oryza nivara 22 40 30 No Oryza brachyantha 22 Malo sina 31 25 No Oryza sativa ssp. japonica 5.0 Japanese rice 44 33 No Oryza sativa v193 Rice 44 33 No Phyllostachys heterocycla var. pubescens Kikko-chiku 41 31 No Panicum virgatum v202 Switchgrass 59 46 No Setaria italica v164 Foxtail millet 34 24 No Zea mays subsp. mays Maize 47 34 No Zea mays v181 Maize 49 36 No Sorghum bicolor Sorghum 41 30 No Musa balbisiana Balbis banana 47 35 No Musa acuminata 22 Wild Malaysian banana 37 27 No Amborella trichopoda 22 21 16 No Physcomitrella patens 18 16 No Coccomyxa subellipsoidea sp. C-169 v2 12 9 No Asterochloris sp. Cgr/DA1pho v1.0 4 4 No Chlorella variabilis sp. NC64A 32 29 No Chlorella vulgaris 12 9 No Volvox carteri f. nagariensis 26 18 No Volvox carteri v199 26 17 No Chlamydomonas reinhardtii 4.0 34 17 No Ostreococcus sp. RCC809 8 6 No Ostreococcus lucimarinus CCE9901 8 6 No Ostreococcus tauri 8 6 No Bathycoccus prasinos 10 9 No Micromonas sp. RCC299 11 8 No Micromonas pusilla CCMP1545 v3.0 11 9 No Cyanidioschyzon merolae strain 10D 22 1 1 No Cyanidioschyzon merolae 1 1 No Porphyridium purpureum 02_2012 2 2 No Ectocarpus siliculosus 8 2 No Aureococcus anophagefferens 3 3 No Phaeodactylum tricornutum CCAP 1055/1 12 8 No Fragilariopsis cylindrus 178 144 No Thalassiosira pseudonana CCMP1335 6 5 No Neospora caninum 3 3 No Toxoplasma gondii VEG 3 3 No Toxoplasma gondii ME49 3 3 No Toxoplasma gondii GT1 3 3 No Babesia bovis T2Bo 2 2 No Theileria parva 1 1 No Theileria annulata 1 1 No Plasmodium falciparum 3D7 1 1 No Plasmodium vivax SaI-1 7.0 1 1 No Plasmodium knowlesi strain H 1 1 No Plasmodium chabaudi 1 1 No Plasmodium berghei ANKA 1 1 No Symbiodinium minutum clade B1 v1.2 11 7 No Guillardia theta CCMP2712 v1.0 2 2 No Emiliania huxleyi CCMP1516 11 10 No Leptolyngbya sp. PCC 7376 1 1 No Pseudanabaena sp. PCC 7367 1 1 No Acaryochloris marina MBIC11017 2 2 No Synechocystis sp. PCC 6803 2 2 No Thermosynechococcus sp. NK55 1 1 No Thermosynechococcus elongatus BP-1 1 1 No Synechococcus sp. PCC 7502 2 2 No Synechococcus sp. PCC 6312 2 2 No Synechococcus elongatus PCC 7942 2 2 No Microcoleus sp. PCC 7113 4 4 No Trichodesmium erythraeum IMS101 2 2 No Geitlerinema sp. PCC 7407 3 3 No Cyanothece sp. PCC 8802 2 2 No Gloeocapsa sp. PCC 7428 5 5 No Halothece sp. PCC 7418 1 1 No Microcystis aeruginosa NIES-843 1 1 No Gloeobacter violaceus PCC 7421 4 4 No Rivularia sp. PCC 7116 3 3 No Calothrix sp. PCC 7507 6 6 No Anabaena variabilis ATCC 29413 6 6 No 'Nostoc azollae' 0708 2 2 No Nostoc sp. PCC 7107 5 5 No Nostoc punctiforme PCC 73102 5 5 No Nostoc sp. PCC 7120 6 6 No Nostoc sp. PCC 7524 3 3 No Anabaena sp. 90 3 3 No Ilumatobacter coccineus 6 4 No Thermobispora bispora DSM 43833 1 1 No Nakamurella multipartita DSM 44233 1 1 No Modestobacter marinus 1 1 No Blastococcus saxobsidens DD2 1 1 No Geodermatophilus obscurus DSM 43160 2 2 No Kineococcus radiotolerans SRS30216 1 1 No Catenulispora acidiphila DSM 44928 1 1 No Stackebrandtia nassauensis DSM 44728 1 1 No Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 1 1 No Streptosporangium roseum DSM 43021 2 2 No Kitasatospora setae KM-6054 1 1 No Streptomyces coelicolor A3(2) 2 2 No Streptomyces sp. PAMC26508 4 4 No Streptomyces flavogriseus ATCC 33331 3 3 No Streptomyces sp. SirexAA-E 1 1 No Streptomyces griseus subsp. griseus NBRC 13350 4 4 No Streptomyces cattleya NRRL 8057 = DSM 46488 1 1 No Streptomyces scabiei 87.22 1 1 No Streptomyces hygroscopicus subsp. jinggangensis 5008 1 1 No Actinosynnema mirum DSM 43827 1 1 No Pseudonocardia dioxanivorans CB1190 1 1 No Amycolatopsis mediterranei U32 1 1 No Kribbella flavida DSM 17836 3 3 No Nocardioides sp. JS614 1 1 No Verrucosispora maris AB-18-032 1 1 No Micromonospora sp. L5 1 1 No Micromonospora aurantiaca ATCC 27029 1 1 No Actinoplanes sp. N902-109 2 2 No Actinoplanes sp. SE50/110 3 3 No Actinoplanes missouriensis 431 3 3 No Segniliparus rotundus DSM 44985 1 1 No Gordonia sp. KTR9 1 1 No Gordonia polyisoprenivorans VH2 1 1 No Gordonia bronchialis DSM 43247 1 1 No Rhodococcus jostii RHA1 1 1 No Rhodococcus equi 103S 1 1 No Rhodococcus opacus B4 1 1 No Rhodococcus erythropolis PR4 1 1 No Nocardia cyriacigeorgica GUH-2 1 1 No Amycolicicoccus subflavus DQS3-9A1 1 1 No Mycobacterium sp. JLS 3 3 No Mycobacterium vanbaalenii PYR-1 3 3 No Mycobacterium canettii CIPT 140010059 2 2 No Mycobacterium africanum GM041182 2 2 No Mycobacterium tuberculosis KZN 1435 2 2 No Mycobacterium tuberculosis 2 2 No Mycobacterium bovis BCG str. Pasteur 1173P2 2 2 No Mycobacterium rhodesiae NBB3 3 3 No Mycobacterium gilvum PYR-GCK 3 3 No Mycobacterium chubuense NBB4 2 2 No Mycobacterium marinum M 1 1 No Mycobacterium smegmatis str. MC2 155 1 1 No Corynebacterium efficiens YS-314 1 1 No Corynebacterium variabile DSM 44702 2 2 No Sanguibacter keddieii DSM 10542 1 1 No Beutenbergia cavernae DSM 12333 1 1 No Microbacterium testaceum StLB037 1 1 No Intrasporangium calvum DSM 43043 1 1 No Cellulomonas fimi ATCC 484 1 1 No [Cellvibrio] gilvus ATCC 13127 1 1 No Arthrobacter phenanthrenivorans Sphe3 1 1 No Arthrobacter chlorophenolicus A6 2 2 No Arthrobacter aurescens TC1 1 1 No Arthrobacter arilaitensis Re117 1 1 No Arthrobacter sp. Rue61a 1 1 No Arthrobacter sp. FB24 1 1 No Caldilinea aerophila DSM 14535 = NBRC 104270 8 5 No Dehalococcoides ethenogenes 195 1 1 No Dehalococcoides sp. BAV1 1 1 No Anaerolinea thermophila UNI-1 5 1 No Truepera radiovictrix DSM 17093 4 4 No Deinococcus gobiensis I-0 4 2 No Deinococcus deserti VCD115 3 1 No Deinococcus maricopensis DSM 21211 3 1 No Deinococcus geothermalis DSM 11300 3 1 No Deinococcus proteolyticus MRP 1 1 No Deinococcus radiodurans R1 3 1 No Meiothermus silvanus DSM 9946 1 1 No Meiothermus ruber DSM 1279 1 1 No Clostridium lentocellum DSM 5427 1 1 No Clostridium cellulovorans 743B 1 1 No Halanaerobium hydrogeniformans 1 1 No Bacillus pseudofirmus OF4 1 1 No Bacillus cellulosilyticus DSM 2522 1 1 No Gemmatimonas aurantiaca T-27 2 2 No Haliscomenobacter hydrossis DSM 1100 5 4 No Niastella koreensis GR20-10 7 6 No Chitinophaga pinensis DSM 2588 2 2 No Salinibacter ruber M8 4 4 No Belliella baltica DSM 15883 9 6 No Cyclobacterium marinum DSM 745 2 1 No Marivirga tractuosa DSM 4126 6 5 No Fibrella aestuarina 6 4 No Dyadobacter fermentans DSM 18053 4 3 No Cytophaga hutchinsonii ATCC 33406 1 1 No Spirosoma linguale DSM 74 9 6 No Runella slithyformis DSM 19594 7 5 No Odoribacter splanchnicus DSM 20712 3 3 No Prevotella melaninogenica ATCC 25845 1 1 No Prevotella denticola F0289 1 1 No Bacteroides thetaiotaomicron VPI-5482 5 4 No Pedobacter saltans DSM 12145 6 4 No Solitalea canadensis DSM 3403 1 1 No Pedobacter heparinus DSM 2366 8 5 No Sphingobacterium sp. 21 2 2 No Fluviicola taffensis DSM 16823 2 2 No Owenweeksia hongkongensis DSM 17368 4 3 No Zunongwangia profunda SM-A87 5 4 No Krokinobacter sp. 4H-3-7-5 7 5 No Gramella forsetii KT0803 3 3 No Lacinutrix sp. 5H-3-7-4 4 3 No Maribacter sp. HTCC2170 6 3 No Robiginitalea biformata HTCC2501 7 5 No Croceibacter atlanticus HTCC2559 2 2 No Aequorivita sublithincola DSM 14238 9 7 No Zobellia galactanivorans 7 4 No Muricauda ruestringensis DSM 13258 7 4 No Cellulophaga algicola DSM 14237 9 6 No Cellulophaga lytica DSM 7489 6 3 No Flavobacteriaceae bacterium 3519-10 3 2 No Polaribacter sp. MED152 3 2 No Flavobacterium indicum GPTSA100-9 3 2 No Flavobacterium johnsoniae UW101 1 1 No Candidatus Protochlamydia amoebophila UWE25 1 1 No Phycisphaera mikurensis NBRC 102666 2 2 No Isosphaera pallida ATCC 43644 3 3 No Planctomyces brasiliensis DSM 5305 1 1 No Planctomyces limnophilus DSM 3776 2 2 No Rhodopirellula baltica SH 1 1 1 No Pirellula staleyi DSM 6068 2 2 No Coraliomargarita akajimensis DSM 45221 3 2 No Opitutus terrae PB90-1 1 1 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1 1 No Spirochaeta smaragdinae DSM 11293 2 2 No Treponema brennaborense DSM 12168 1 1 No Treponema succinifaciens DSM 2489 1 1 No Mesotoga prima MesG1.Ag.4.2 3 1 No Candidatus Solibacter usitatus Ellin6076 2 2 No Granulicella tundricola MP5ACTX9 1 1 No Granulicella mallensis MP5ACTX8 1 1 No Terriglobus roseus DSM 18391 1 1 No Acidobacterium capsulatum ATCC 51196 1 1 No Geobacter sp. M21 1 1 No Geobacter uraniireducens Rf4 1 1 No Pelobacter propionicus DSM 2379 1 1 No Pelobacter carbinolicus DSM 2380 2 2 No Methylibium petroleiphilum PM1 1 1 No Rubrivivax gelatinosus IL144 1 1 No Ralstonia eutropha JMP134 2 1 No Ralstonia pickettii 12D 1 1 No Alicycliphilus denitrificans K601 2 1 No Ramlibacter tataouinensis TTB310 2 2 No Delftia sp. Cs1-4 1 1 No Delftia acidovorans SPH-1 1 1 No Polaromonas sp. JS666 1 1 No Polaromonas naphthalenivorans CJ2 1 1 No Acidovorax ebreus TPSY 1 1 No Acidovorax sp. KKS102 4 3 No Acidovorax sp. JS42 1 1 No Acidovorax citrulli AAC00-1 1 1 No Acidovorax avenae subsp. avenae ATCC 19860 1 1 No Collimonas fungivorans Ter331 1 1 No Janthinobacterium sp. Marseille 1 1 No Advenella kashmirensis WT001 1 1 No Bordetella avium 197N 1 1 No Achromobacter xylosoxidans 1 1 No Asticcacaulis excentricus CB 48 1 1 No Brevundimonas subvibrioides ATCC 15264 3 3 No Caulobacter crescentus NA1000 1 1 No Caulobacter segnis ATCC 21756 2 2 No Phenylobacterium zucineum HLK1 1 1 No Erythrobacter litoralis HTCC2594 4 4 No Sphingopyxis alaskensis RB2256 2 2 No Novosphingobium sp. PP1Y 1 1 No Novosphingobium aromaticivorans DSM 12444 2 2 No Maricaulis maris MCS10 1 1 No Hyphomonas neptunium ATCC 15444 4 4 No Dinoroseobacter shibae DFL 12 4 3 No Phaeobacter gallaeciensis 2.10 1 1 No Pseudovibrio sp. FO-BEG1 1 1 No Jannaschia sp. CCS1 2 2 No Ruegeria sp. TM1040 2 2 No Ketogulonicigenium vulgare Y25 1 1 No Ketogulonigenium vulgarum WSH-001 1 1 No Roseobacter litoralis Och 149 3 3 No Roseobacter denitrificans OCh 114 3 3 No Rhodobacter sphaeroides ATCC 17029 1 1 No Azospirillum lipoferum 4B 1 1 No Azospirillum sp. B510 1 1 No Azospirillum brasilense Sp245 1 1 No Gluconacetobacter diazotrophicus PAl 5 1 1 No Acidiphilium multivorum AIU301 1 1 No Acidiphilium cryptum JF-5 1 1 No Gluconobacter oxydans 621H 1 1 No Acetobacter pasteurianus IFO 3283-01 1 1 No Polymorphum gilvum SL003B-26A1 1 1 No Methylobacterium chloromethanicum CM4 1 1 No Methylobacterium extorquens AM1 1 1 No Methylobacterium populi BJ001 1 1 No Parvibaculum lavamentivorans DS-1 1 1 No Ochrobactrum anthropi ATCC 49188 1 1 No Sinorhizobium fredii NGR234 1 1 No Sinorhizobium medicae WSM419 1 1 No Genome sequence of Rhizobium sp. strain IRBG74 1 1 No Rhizobium etli CIAT 652 1 1 No Rhizobium leguminosarum bv. viciae 3841 1 1 No Agrobacterium tumefaciens str. C58 1 1 No Agrobacterium radiobacter K84 1 1 No Agrobacterium sp. H13-3 1 1 No Agrobacterium vitis S4 1 1 No Mesorhizobium opportunistum WSM2075 2 2 No Mesorhizobium ciceri biovar biserrulae WSM1271 2 2 No Mesorhizobium loti MAFF303099 2 2 No Methylocella silvestris BL2 2 2 No Beijerinckia indica subsp. indica ATCC 9039 1 1 No Pelagibacterium halotolerans B2 2 2 No Rhodopseudomonas palustris BisA53 1 1 No Bradyrhizobium japonicum USDA 110 3 3 No Bradyrhizobium sp. ORS 278 2 2 No Oceanimonas sp. GK1 1 1 No Vibrio sp. Ex25 1 1 No Vibrio harveyi ATCC BAA-1116 1 1 No Vibrio splendidus LGP32 1 1 No Photobacterium profundum SS9 2 1 No Psychromonas ingrahamii 37 1 1 No Colwellia psychrerythraea 34H 4 1 No Pseudoalteromonas sp. SM9913 5 2 No Glaciecola nitratireducens FR1064 5 2 No Marinobacter sp. BSs20148 1 1 No Marinobacter hydrocarbonoclasticus ATCC 49840 2 1 No Marinobacter aquaeolei VT8 2 1 No Alteromonas sp. SN2 1 1 No Marinomonas sp. MWYL1 1 1 No Stenotrophomonas maltophilia K279a 1 1 No Xanthomonas axonopodis pv. citri str. 306 1 1 No Xanthomonas oryzae pv. oryzae PXO99A 1 1 No Xanthomonas campestris pv. campestris str. B100 1 1 No Rahnella sp. Y9602 1 1 No Rahnella aquatilis CIP 78.65 = ATCC 33071 1 1 No Yersinia enterocolitica subsp. enterocolitica 8081 1 1 No Pantoea vagans C9-1 1 1 No Pantoea ananatis LMG 20103 1 1 No Erwinia billingiae Eb661 1 1 No Pseudomonas fluorescens SBW25 1 1 No Psychrobacter sp. G 2 2 No Psychrobacter sp. PRwf-1 2 2 No Psychrobacter arcticus 273-4 2 2 No Psychrobacter cryohalolentis K5 2 2 No Methanocella arvoryzae MRE50 6 6 No Methanocella conradii HZ254 3 3 No Methanocella paludicola SANAE 8 8 No Methanosaeta harundinacea 6Ac 2 2 No Methanosaeta concilii GP6 2 1 No Methanohalobium evestigatum Z-7303 3 2 No Methanococcoides burtonii DSM 6242 1 1 No Methanosarcina acetivorans C2A 3 2 No Methanosarcina mazei Go1 3 2 No Methanosarcina barkeri str. Fusaro 1 1 No Methanohalophilus mahii DSM 5219 1 1 No Methanosphaerula palustris E1-9c 1 1 No Methanoregula boonei 6A8 1 1 No Methanoculleus bourgensis MS2 7 7 No Methanoculleus marisnigri JR1 8 8 No Haloarcula hispanica ATCC 33960 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 24 6 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 94 26 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 14 6 No Ascaris suum Victoria/Ghent Pig roundworm 5 2 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 5 2 No Cryptococcus neoformans var. grubii H99 10 4 No Cryptococcus neoformans B-3501A 10 4 No Cryptococcus neoformans JEC21 10 4 No Paracoccidioides brasiliensis Pb01 3 2 No Paracoccidioides brasiliensis Pb03 3 2 No Coccidioides posadasii str. Silveira 3 2 No Coccidioides immitis RMSCC 3703 2 2 No Coccidioides immitis RMSCC 2394 3 2 No Coccidioides immitis H538.4 2 2 No Ajellomyces dermatitidis ER-3 4 3 No Histoplasma capsulatum H143 4 2 No Histoplasma capsulatum H88 5 3 No Histoplasma capsulatum G186AR 5 3 No Aspergillus fumigatus A1163 4 3 No Candida albicans WO-1 2 1 No Saccharomyces cerevisiae UC5 4 1 No Saccharomyces cerevisiae PW5 4 1 No Saccharomyces cerevisiae YJM269 4 1 No Saccharomyces cerevisiae T7 4 1 No Saccharomyces cerevisiae FostersB 4 1 No Saccharomyces cerevisiae FostersO 3 1 No Saccharomyces cerevisiae VL3 4 1 No Saccharomyces cerevisiae Vin13 4 1 No Saccharomyces cerevisiae LalvinQA23 4 1 No Saccharomyces cerevisiae AWRI796 4 1 No Saccharomyces cerevisiae Sigma1278b 4 1 No Saccharomyces cerevisiae W303 4 1 No Saccharomyces cerevisiae JAY291 4 1 No Saccharomyces cerevisiae AWRI1631 4 1 No Saccharomyces cerevisiae YPS163 3 1 No Saccharomyces cerevisiae CLIB215 4 1 No Saccharomyces cerevisiae YJM789 4 1 No Saccharomyces cerevisiae YJM789 4 1 No Saccharomyces cerevisiae RM11-1a 4 1 No Saccharomyces cerevisiae RM11-1a 4 1 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 4 1 No Schizosaccharomyces pombe 972h- 4 2 No Batrachochytrium dendrobatidis JEL423 5 4 No Batrachochytrium dendrobatidis JAM81 6 4 No Theobroma cacao Matina 1-6 v0.9 Cacao 33 23 No Hordeum vulgare 22 Domesticated barley 37 33 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 36 28 No Neospora caninum Nc-Liverpool 6.2 3 3 No Plasmodium falciparum HB3 1 1 No Chroococcidiopsis thermalis PCC 7203 7 7 No Chamaesiphon minutus PCC 6605 4 4 No Synechocystis sp. PCC 6803 substr. PCC-P 2 2 No Synechocystis sp. PCC 6803 substr. PCC-N 2 2 No Synechocystis sp. PCC 6803 substr. GT-I 2 2 No Synechocystis sp. PCC 6803 2 2 No Cyanobium gracile PCC 6307 1 1 No Dactylococcopsis salina PCC 8305 3 3 No Synechococcus sp. JA-2-3B'a(2-13) 4 4 No Synechococcus sp. JA-3-3Ab 4 4 No Synechococcus sp. PCC 7002 2 2 No Synechococcus elongatus PCC 6301 2 2 No Crinalium epipsammum PCC 9333 3 3 No Oscillatoria nigro-viridis PCC 7112 4 4 No Oscillatoria acuminata PCC 6304 3 3 No Arthrospira platensis NIES-39 4 4 No Cyanothece sp. PCC 7822 5 5 No Cyanothece sp. PCC 7425 3 3 No Cyanothece sp. PCC 7424 4 4 No Cyanothece sp. ATCC 51142 2 2 No Cyanothece sp. PCC 8801 2 2 No Cyanobacterium aponinum PCC 10605 1 1 No Gloeobacter kilaueensis Gloeobacter sp. JS 6 6 No Pleurocapsa minor Pleurocapsa sp. PCC 7327 3 3 No Stanieria cyanosphaera PCC 7437 2 2 No Calothrix parietina Calothrix sp. PCC 6303 4 4 No Cylindrospermum stagnale PCC 7417 5 5 No Anabaena cylindrica PCC 7122 3 3 No Nocardiopsis alba ATCC BAA-2165 1 1 No Streptomyces albus J1074 1 1 No Streptomyces fulvissimus DSM 40593 3 3 No Streptomyces venezuelae ATCC 10712 1 1 No Streptomyces collinus Tu 365 2 2 No Streptomyces cattleya NRRL 8057 = DSM 46488 1 1 No Streptomyces hygroscopicus subsp. jinggangensis TL01 1 1 No Saccharothrix espanaensis DSM 44229 1 1 No Amycolatopsis mediterranei RB 1 1 No Amycolatopsis mediterranei S699 1 1 No Amycolatopsis mediterranei S699 1 1 No Amycolatopsis orientalis HCCB10007 1 1 No Actinoplanes friuliensis DSM 7358 2 2 No Rhodococcus pyridinivorans SB3094 1 1 No Rhodococcus erythropolis CCM2595 1 1 No Nocardia brasiliensis ATCC 700358 1 1 No Mycobacterium liflandii 128FXT 1 1 No Mycobacterium sp. KMS 3 3 No Mycobacterium sp. MCS 3 3 No Mycobacterium indicus pranii MTCC 9506 2 2 No Mycobacterium canettii CIPT 140070017 2 2 No Mycobacterium canettii CIPT 140060008 2 2 No Mycobacterium canettii CIPT 140070008 2 2 No Mycobacterium canettii CIPT 140070010 2 2 No Mycobacterium tuberculosis EAI5/NITR206 2 2 No Mycobacterium tuberculosis EAI5 2 2 No Mycobacterium tuberculosis CAS/NITR204 2 2 No Mycobacterium tuberculosis str. Beijing/NITR203 2 2 No Mycobacterium tuberculosis UT205 2 2 No Mycobacterium tuberculosis RGTB423 2 2 No Mycobacterium tuberculosis RGTB327 2 2 No Mycobacterium tuberculosis CTRI-2 2 2 No Mycobacterium tuberculosis str. Erdman = ATCC 35801 2 2 No Mycobacterium tuberculosis KZN 605 2 2 No Mycobacterium tuberculosis KZN 4207 2 2 No Mycobacterium tuberculosis CCDC5180 2 2 No Mycobacterium tuberculosis CCDC5079 2 2 No Mycobacterium tuberculosis CCDC5079 2 2 No Mycobacterium tuberculosis H37Ra 2 2 No Mycobacterium tuberculosis str. Haarlem/NITR202 2 2 No Mycobacterium tuberculosis str. Haarlem 2 2 No Mycobacterium tuberculosis F11 2 2 No Mycobacterium tuberculosis H37Rv 2 2 No Mycobacterium tuberculosis CDC1551 2 2 No Mycobacterium bovis AF2122/97 2 2 No Mycobacterium bovis BCG str. Korea 1168P 2 2 No Mycobacterium bovis BCG str. Mexico 2 2 No Mycobacterium bovis BCG str. Tokyo 172 2 2 No Mycobacterium gilvum Spyr1 3 3 No Mycobacterium smegmatis str. MC2 155 1 1 No Mycobacterium kansasii ATCC 12478 2 2 No Corynebacterium maris DSM 45190 1 1 No Dehalococcoides mccartyi GY50 1 1 No Dehalococcoides mccartyi DCMB5 1 1 No Dehalococcoides mccartyi BTF08 1 1 No Dehalococcoides sp. GT 1 1 No Dehalococcoides sp. VS 1 1 No Dehalococcoides sp. CBDB1 1 1 No Chthonomonas calidirosea T49 1 1 No Deinococcus peraridilitoris DSM 19664 4 2 No Salinibacter ruber DSM 13855 7 6 No Echinicola vietnamensis DSM 17526 19 9 No Emticicia oligotrophica DSM 17448 3 2 No Prevotella sp. oral taxon 299 str. F0039 1 1 No Prevotella dentalis DSM 3688 18 14 No Bacteroides xylanisolvens XB1A 5 3 No Nonlabens dokdonensis DSW-6 7 5 No Psychroflexus torquis ATCC 700755 10 6 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1 1 No Geobacter sp. M18 1 1 No Pandoraea pnomenusa 3kgm 1 1 No Ralstonia pickettii 12J 1 1 No Burkholderia lata 1 1 No Variovorax paradoxus B4 1 1 No Variovorax paradoxus EPS 2 2 No Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 1 1 No Caulobacter crescentus CB15 1 1 No Phaeobacter gallaeciensis DSM 17395 1 1 No Phaeobacter gallaeciensis DSM 26640 1 1 No Octadecabacter antarcticus 307 3 3 No Octadecabacter arcticus 238 4 4 No Rhodobacter sphaeroides KD131 1 1 No Rhodobacter sphaeroides ATCC 17025 1 1 No Rhodobacter sphaeroides 2.4.1 1 1 No Gluconacetobacter diazotrophicus PAl 5 1 1 No Gluconobacter oxydans H24 1 1 No Acetobacter pasteurianus 386B 1 1 No Acetobacter pasteurianus IFO 3283-12 1 1 No Acetobacter pasteurianus IFO 3283-01-42C 1 1 No Acetobacter pasteurianus IFO 3283-32 1 1 No Acetobacter pasteurianus IFO 3283-26 1 1 No Acetobacter pasteurianus IFO 3283-22 1 1 No Acetobacter pasteurianus IFO 3283-07 1 1 No Acetobacter pasteurianus IFO 3283-03 1 1 No Methylobacterium extorquens DM4 1 1 No Methylobacterium extorquens PA1 1 1 No Sinorhizobium fredii HH103 1 1 No Sinorhizobium meliloti GR4 1 1 No Sinorhizobium meliloti 1021 1 1 No Rhizobium etli CFN 42 2 2 No Rhizobium etli bv. mimosae str. Mim1 2 2 No Rhizobium tropici CIAT 899 1 1 No Rhizobium leguminosarum bv. trifolii WSM2304 1 1 No Rhizobium leguminosarum bv. trifolii WSM1325 1 1 No Mesorhizobium australicum WSM2073 2 2 No Rhodopseudomonas palustris DX-1 1 1 No Rhodopseudomonas palustris TIE-1 1 1 No Rhodopseudomonas palustris HaA2 1 1 No Rhodopseudomonas palustris BisB5 1 1 No Rhodopseudomonas palustris BisB18 1 1 No Rhodopseudomonas palustris CGA009 1 1 No Bradyrhizobium sp. S23321 2 2 No Bradyrhizobium sp. BTAi1 2 2 No Bradyrhizobium oligotrophicum S58 2 2 No Bradyrhizobium japonicum USDA 6 1 1 No Vibrio alginolyticus NBRC 15630 = ATCC 17749 1 1 No Vibrio nigripulchritudo VibrioScope 1 1 No Glaciecola psychrophila 170 3 3 No Alteromonas macleodii str. 'English Channel 673' 1 1 No Alteromonas macleodii str. 'Balearic Sea AD45' 1 1 No Alteromonas macleodii str. 'Black Sea 11' 1 1 No Alteromonas macleodii ATCC 27126 1 1 No Stenotrophomonas maltophilia D457 1 1 No Stenotrophomonas maltophilia JV3 1 1 No Stenotrophomonas maltophilia R551-3 1 1 No Xanthomonas citri subsp. citri Aw12879 1 1 No Xanthomonas campestris pv. vesicatoria str. 85-10 1 1 No Xanthomonas axonopodis pv. citrumelo F1 1 1 No Xanthomonas axonopodis Xac29-1 1 1 No Xanthomonas oryzae pv. oryzicola BLS256 1 1 No Xanthomonas oryzae pv. oryzae MAFF 311018 1 1 No Xanthomonas oryzae pv. oryzae KACC 10331 1 1 No Xanthomonas campestris pv. raphani 756C 1 1 No Xanthomonas campestris pv. campestris str. 8004 1 1 No Xanthomonas campestris pv. campestris str. ATCC 33913 1 1 No Rahnella aquatilis HX2 1 1 No Yersinia enterocolitica subsp. palearctica 105.5R(r) 1 1 No Yersinia enterocolitica subsp. palearctica Y11 1 1 No Serratia plymuthica S13 1 1 No Pantoea ananatis LMG 5342 1 1 No Pantoea ananatis PA13 1 1 No Pantoea ananatis AJ13355 1 1 No Enterobacter cloacae subsp. cloacae ENHKU01 1 1 No Pseudomonas fluorescens R124 1 1 No Methanomethylovorans hollandica DSM 15978 1 1 No Methanolobus psychrophilus R15 4 4 No Methanosarcina mazei Tuc01 3 2 No Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1 1 No Haloarcula hispanica N601 1 1 No Methanobacterium sp. SWAN-1 2 2 No Homo sapiens 75_37 (old version GRC) Human 56 16 No Homo sapiens Human 34 7 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 22 4 No Heliconius numata 3 2 No Loa loa v3.3 (Request) Eye worm 6 2 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 8 5 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 6 2 No Moniliophthora perniciosa FA553 7 7 No Picea sitchensis Sitka spruce 4 3 No Lotus japonicus 34 26 No Malus x domestica (Duplicate) Apple 59 44 No Ricinus communis Castor bean 38 31 No Nicotiana benthamiana 0.4.4 (Early draft) 77 56 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 37 26 No Solanum lycopersicum v2.3 (Early assembly) Tomato 37 26 No Phoenix dactylifera Date palm 3 3 No Mycobacterium tuberculosis H37Rv (Duplicate of ex) 2 2 No Vibrio campbellii ATCC BAA-1116 (Duplicate of NC) 1 1 No Homo sapiens 69_37 Human 26 5 No Pan troglodytes 69_2.1.4 Chimpanzee 22 4 No Gorilla gorilla 69_3.1 Western gorilla 26 5 No Pongo abelii 69_2 Sumatran orangutan 22 4 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 21 4 No Macaca mulatta 69_1 Rhesus monkey 22 4 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 26 5 No Otolemur garnettii 69_3 Small-eared galago 22 4 No Microcebus murinus 69_1 Gray mouse lemur 21 4 No Rattus norvegicus 69_3.4 Norway rat 18 5 No Mus musculus 69_38 House mouse 22 4 No Dipodomys ordii 69_1 Ord's kangaroo rat 19 4 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 22 4 No Cavia porcellus 69_3 Domestic guinea pig 21 4 No Oryctolagus cuniculus 69_2 Rabbit 22 4 No Ochotona princeps 69 American pika 22 4 No Tupaia belangeri 69 Northern tree shrew 12 3 No Sus scrofa 69_10.2 Pig 19 4 No Bos taurus 69_3.1 Cattle 22 4 No Vicugna pacos 69_1 Alpaca 13 3 No Tursiops truncatus 69_1 Bottlenose dolphin 22 4 No Mustela putorius furo 69_1.0 Domestic ferret 22 4 No Ailuropoda melanoleuca 69_1 Giant panda 22 4 No Canis familiaris 69_3.1 Dog 19 4 No Felis catus 69 Domestic cat 18 4 No Equus caballus 69_2 Horse 22 4 No Myotis lucifugus 69_2.0 Little brown bat 22 4 No Pteropus vampyrus 69_1 Large flying fox 22 4 No Sorex araneus 69_1 European shrew 16 4 No Erinaceus europaeus 69 Western European hedgehog 13 3 No Procavia capensis 69_1 Cape rock hyrax 21 4 No Loxodonta africana 69_3 African savanna elephant 21 5 No Echinops telfairi 69 Small Madagascar hedgehog 14 4 No Dasypus novemcinctus 69_2 Nine-banded armadillo 17 4 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 4 No Macropus eugenii 69_1.0 Tammar wallaby 23 4 No Sarcophilus harrisii 69_7.0 Tasmanian devil 17 4 No Monodelphis domestica 69_5 Gray short-tailed opossum 22 4 No Ornithorhynchus anatinus 69_5 Platypus 22 4 No Petromyzon marinus 69_7.0 Sea lamprey 8 3 No Meleagris gallopavo 69_2 Turkey 21 4 No Gallus gallus 69_2 Chicken 21 4 No Taeniopygia guttata 69_3.2.4 Zebra finch 24 6 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 23 6 No Anolis carolinensis 69_2.0 Green anole 17 4 No Xenopus tropicalis 69_4.2 Tropical clawed frog 15 3 No Latimeria chalumnae 69_1 Coelacanth 21 4 No Gadus morhua 69_1 Atlantic cod 17 5 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 21 7 No Takifugu rubripes 69_4 Torafugu 21 4 No Gasterosteus aculeatus 69_1 Three-spined stickleback 18 5 No Oryzias latipes 69_1 Japanese medaka 22 4 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 19 4 No Oreochromis niloticus 69_1.0 Nile tilapia 26 5 No Danio rerio 69_9 Zebrafish 26 5 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 1 No Ciona intestinalis 69 Vase tunicate 7 3 No Drosophila melanogaster 69_5 Fruit fly 12 4 No Caenorhabditis elegans 69_215 Roundworm 3 1 No Saccharomyces cerevisiae 69_4 Baker's yeast 4 1 No Arabidopsis thaliana 10 Thale cress 35 24 No 2_050719S (meta-genome) 3 3 No 2_Base_of_chrolophyll_max (meta-genome) 1 1 No 3_050719R (meta-genome) 10 10 No 4_050719Q (meta-genome) 15 15 No 5_050719P (meta-genome) 15 15 No 6_Upper_euphotic (meta-genome) 2 2 No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 2 2 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 6 6 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 14 13 No Atta cephalotes fungus garden (ACEF) (meta-genome) 6 6 No Combined (meta-genome) 24 20 No Cyphomyrmex longiscapus fungus garden (meta-genome) 10 10 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 3 3 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 4 4 No Dump bottom (Dump bottom) (meta-genome) 23 23 No Dump top (Dump top) (meta-genome) 17 17 No Endophytic microbiome from Rice (meta-genome) 3 3 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 3 3 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 1 1 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 11 11 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 4 4 No Fungus garden combined (combined) (meta-genome) 5 5 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 7 7 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 13 13 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 2 2 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 10 7 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 4 3 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 5 4 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 5 4 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 3 3 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 3 3 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 5 5 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 10 10 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 16 15 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 7 7 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 11 11 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 15 15 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 5 5 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 38 36 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 9 9 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 4 4 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 9 8 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 11 11 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 5 4 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 4 4 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 1 1 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 2 2 No NCBI 2017_08 genome 48339 32270 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 7 7 No Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 1 1 No Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome) 1 1 No Protozoadb 2010_08 (Protozoadb) 18 18 No simHC - Simulated High Complexity Metagenome (meta-genome) 4 4 No simLC - Simulated Low Complexity Metagenome (meta-genome) 8 8 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 11 11 No Sludge/Australian, Phrap Assembly (meta-genome) 2 2 No Sludge/US, Jazz Assembly (meta-genome) 3 3 No Sludge/US, Phrap Assembly (meta-genome) 8 7 No Soil microbial communities from Minnesota Farm (meta-genome) 20 20 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 57 55 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 52 51 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 31 31 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 43 43 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 11 11 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 18 18 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 3 2 Yes STRING v9.0.5 (STRING) 1804 942 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 2 2 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 13 13 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 4 4 No Termite Protist Endosymbiont Community (meta-genome) 2 2 No Uniprot 2018_03 genome 34681 21189 No Uranium Contaminated Groundwater FW106 (meta-genome) 1 1 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 15 10 No Global Ocean Sampling Expedition (GOS) 1055 735 No NCBI plasmid sequences (Plasmids) 20 18 No NCBI viral sequences (Viral) 8 8 No PDB chains (SCOP 1.75 ) (PDB) 3 2 No Protein Data Bank (all PDB sequenc) 34 21 No SCOP2 SCOPe CATH ECOD (all domain sequ) 32 32 No TargetDB 19 17 No UniProt 2 2
