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  Home > Genomes > Mustela putorius furo 69_1.0 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Mustela putorius furo 69_1.0

Assignment details

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Mustela putorius furo 69_1.0 has 311 significant domains in 58 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000000144   0.0000000000278   861-928   Complement control module/SCR domain  
ENSMPUP00000000948   7.29e-21   3171-3242   Complement control module/SCR domain  
  7.42e-19   2816-2884   Complement control module/SCR domain  
  2.83e-18   2873-2941   Complement control module/SCR domain  
  4.59e-18   2931-3004   Complement control module/SCR domain  
  5.84e-18   3112-3182   Complement control module/SCR domain  
  8.48e-18   3055-3123   Complement control module/SCR domain  
  4.31e-17   2757-2826   Complement control module/SCR domain  
  8.5e-17   3231-3300   Complement control module/SCR domain  
  0.00000000000000167   485-556   Complement control module/SCR domain  
  0.00000000000000189   2223-2292   Complement control module/SCR domain  
  0.00000000000000236   2630-2697   Complement control module/SCR domain  
  0.0000000000000025   3290-3346   Complement control module/SCR domain  
  0.00000000000000347   3351-3419   Complement control module/SCR domain  
  0.00000000000000361   2987-3048   Complement control module/SCR domain  
  0.0000000000000181   2568-2641   Complement control module/SCR domain  
  0.0000000000000378   1009-1069   Complement control module/SCR domain  
  0.0000000000000378   2051-2113   Complement control module/SCR domain  
  0.0000000000000432   1527-1591   Complement control module/SCR domain  
  0.0000000000001   1700-1765   Complement control module/SCR domain  
  0.000000000000139   663-722   Complement control module/SCR domain  
  0.00000000000032   1877-1943   Complement control module/SCR domain  
  0.000000000000432   1182-1244   Complement control module/SCR domain  
  0.000000000000526   177-238   Complement control module/SCR domain  
  0.00000000000133   1353-1415   Complement control module/SCR domain  
  0.00000000000195   3410-3468   Complement control module/SCR domain  
  0.00000000000337   834-901   Complement control module/SCR domain  
  0.00000000000542   2704-2768   Complement control module/SCR domain  
  0.0000000000877   2394-2457   Complement control module/SCR domain  
ENSMPUP00000001679   0.000000000104   1208-1275   Complement control module/SCR domain  
  0.00000000104   1139-1211   Complement control module/SCR domain  
  0.0000000103   1077-1147   Complement control module/SCR domain  
  0.0000032   1008-1081   Complement control module/SCR domain  
ENSMPUP00000002329   0.0000000000000128   116-177   Complement control module/SCR domain  
  0.0000000000000208   263-322   Complement control module/SCR domain  
  0.0000000347   78-126   Complement control module/SCR domain  
ENSMPUP00000002545   0.0000000000000175   18-78   Complement control module/SCR domain  
ENSMPUP00000002549   4.86e-17   72-144   Complement control module/SCR domain  
ENSMPUP00000002560   3.91e-19   2072-2140   Complement control module/SCR domain  
  1.23e-18   2428-2499   Complement control module/SCR domain  
  5.28e-18   2312-2380   Complement control module/SCR domain  
  8.9e-18   2129-2198   Complement control module/SCR domain  
  9.17e-17   2187-2260   Complement control module/SCR domain  
  4.03e-16   2369-2439   Complement control module/SCR domain  
  0.00000000000000121   2608-2676   Complement control module/SCR domain  
  0.00000000000000133   2546-2603   Complement control module/SCR domain  
  0.00000000000000526   783-847   Complement control module/SCR domain  
  0.0000000000000057   1886-1953   Complement control module/SCR domain  
  0.0000000000000236   90-157   Complement control module/SCR domain  
  0.0000000000000334   608-678   Complement control module/SCR domain  
  0.0000000000000459   957-1021   Complement control module/SCR domain  
  0.0000000000000459   2244-2306   Complement control module/SCR domain  
  0.0000000000000612   2014-2076   Complement control module/SCR domain  
  0.0000000000000634   1133-1196   Complement control module/SCR domain  
  0.0000000000000715   265-325   Complement control module/SCR domain  
  0.0000000000000973   2490-2551   Complement control module/SCR domain  
  0.000000000000256   1824-1897   Complement control module/SCR domain  
  0.000000000000486   1479-1548   Complement control module/SCR domain  
  0.000000000000806   1307-1371   Complement control module/SCR domain  
  0.00000000000256   438-498   Complement control module/SCR domain  
  0.0000000000216   1650-1714   Complement control module/SCR domain  
  0.0000000000306   2663-2724   Complement control module/SCR domain  
  0.00000000125   1967-2024   Complement control module/SCR domain  
ENSMPUP00000002885   0.00000000000000167   722-779   Complement control module/SCR domain  
ENSMPUP00000002896   4.45e-18   104-180   Complement control module/SCR domain  
  0.00000000000000139   169-233   Complement control module/SCR domain  
  0.00000000000000486   232-293   Complement control module/SCR domain  
  0.0000000000011   42-114   Complement control module/SCR domain  
ENSMPUP00000003015   0.0000000000000944   20-80   Complement control module/SCR domain  
  0.0292   3-18   Complement control module/SCR domain  
ENSMPUP00000003025   0.000000000256   2-61   Complement control module/SCR domain  
ENSMPUP00000003336   7.78e-16   300-370   Complement control module/SCR domain  
ENSMPUP00000004089   0.000000000215   813-872   Complement control module/SCR domain  
ENSMPUP00000004453   0.0000000000236   31-92   Complement control module/SCR domain  
ENSMPUP00000005015   0.0000000000195   1518-1592   Complement control module/SCR domain  
  0.00000306   1462-1524   Complement control module/SCR domain  
  0.00000389   1584-1641   Complement control module/SCR domain  
  0.00275   1410-1461   Complement control module/SCR domain  
ENSMPUP00000007372   0.00000000208   13-69   Complement control module/SCR domain  
ENSMPUP00000007373   0.000000000634   2-63   Complement control module/SCR domain  
ENSMPUP00000007386   4.86e-19   1910-1979   Complement control module/SCR domain  
  1.81e-18   1611-1680   Complement control module/SCR domain  
  1.95e-18   1553-1622   Complement control module/SCR domain  
  1.95e-18   1727-1795   Complement control module/SCR domain  
  2.78e-18   3005-3074   Complement control module/SCR domain  
  6.25e-18   2539-2608   Complement control module/SCR domain  
  1.53e-17   2597-2666   Complement control module/SCR domain  
  2.36e-17   2145-2215   Complement control module/SCR domain  
  8.34e-17   1454-1512   Complement control module/SCR domain  
  1.39e-16   2481-2550   Complement control module/SCR domain  
  2.64e-16   2655-2724   Complement control module/SCR domain  
  3.34e-16   2320-2388   Complement control module/SCR domain  
  3.89e-16   2439-2492   Complement control module/SCR domain  
  4.31e-16   2029-2096   Complement control module/SCR domain  
  4.59e-16   2204-2273   Complement control module/SCR domain  
  8.06e-16   2262-2326   Complement control module/SCR domain  
  0.00000000000000375   3182-3241   Complement control module/SCR domain  
  0.00000000000000681   2829-2896   Complement control module/SCR domain  
  0.00000000000000806   3064-3129   Complement control module/SCR domain  
  0.0000000000000121   204-271   Complement control module/SCR domain  
  0.0000000000000131   1669-1732   Complement control module/SCR domain  
  0.0000000000000389   2714-2776   Complement control module/SCR domain  
  0.0000000000000903   1394-1465   Complement control module/SCR domain  
  0.00000000000181   2088-2156   Complement control module/SCR domain  
  0.00000000000264   1784-1852   Complement control module/SCR domain  
  0.0000000000032   2772-2839   Complement control module/SCR domain  
  0.00000000000334   143-214   Complement control module/SCR domain  
  0.00000000001   1970-2034   Complement control module/SCR domain  
  0.0000000000133   2887-2950   Complement control module/SCR domain  
  0.0000000000292   3123-3191   Complement control module/SCR domain  
  0.0000000000431   1848-1921   Complement control module/SCR domain  
  0.000000000598   2947-3010   Complement control module/SCR domain  
  0.0000124   263-320   Complement control module/SCR domain  
  0.000645   494-554   Complement control module/SCR domain  
ENSMPUP00000007642   0.0000000000057   124-194   Complement control module/SCR domain  
  0.0000000000167   184-244   Complement control module/SCR domain  
ENSMPUP00000007743   0.000000366   34-94   Complement control module/SCR domain  
ENSMPUP00000008021   0.000000000089   3298-3356   Complement control module/SCR domain  
ENSMPUP00000009478   3.61e-16   22-91   Complement control module/SCR domain  
ENSMPUP00000009720   6.88e-20   285-357   Complement control module/SCR domain  
  7.51e-16   346-415   Complement control module/SCR domain  
  0.00000000000000222   148-217   Complement control module/SCR domain  
  0.00000000000000675   422-487   Complement control module/SCR domain  
  0.00000000000000903   26-88   Complement control module/SCR domain  
  0.0000000000000301   478-540   Complement control module/SCR domain  
  0.000000000000957   93-159   Complement control module/SCR domain  
  0.000000000594   224-295   Complement control module/SCR domain  
  0.000598   2-31   Complement control module/SCR domain  
ENSMPUP00000009728   9.87e-17   148-217   Complement control module/SCR domain  
  0.00000000000000473   26-88   Complement control module/SCR domain  
  0.000000000000208   93-159   Complement control module/SCR domain  
  0.00000000000836   224-289   Complement control module/SCR domain  
  0.0000123   281-316   Complement control module/SCR domain  
  0.00025   2-31   Complement control module/SCR domain  
ENSMPUP00000009732   2.97e-17   82-154   Complement control module/SCR domain  
  1.07e-16   532-602   Complement control module/SCR domain  
  1.38e-16   903-972   Complement control module/SCR domain  
  4.03e-16   652-721   Complement control module/SCR domain  
  0.0000000000000012   143-211   Complement control module/SCR domain  
  0.00000000000000153   276-341   Complement control module/SCR domain  
  0.00000000000000256   341-409   Complement control module/SCR domain  
  0.00000000000000292   1289-1355   Complement control module/SCR domain  
  0.00000000000000334   1155-1217   Complement control module/SCR domain  
  0.00000000000000375   727-797   Complement control module/SCR domain  
  0.00000000000000783   787-850   Complement control module/SCR domain  
  0.0000000000000162   982-1048   Complement control module/SCR domain  
  0.0000000000000431   215-278   Complement control module/SCR domain  
  0.0000000000000473   1039-1102   Complement control module/SCR domain  
  0.0000000000000486   592-663   Complement control module/SCR domain  
  0.000000000000222   1343-1407   Complement control module/SCR domain  
  0.000000000000375   398-460   Complement control module/SCR domain  
  0.00000000000153   467-525   Complement control module/SCR domain  
  0.00000000000222   1223-1283   Complement control module/SCR domain  
  0.00000000391   22-87   Complement control module/SCR domain  
  0.000000153   1120-1166   Complement control module/SCR domain  
  0.0000431   868-914   Complement control module/SCR domain  
ENSMPUP00000009746   2.16e-16   162-234   Complement control module/SCR domain  
  0.00000000000000162   222-284   Complement control module/SCR domain  
  0.0000000000157   98-167   Complement control module/SCR domain  
  0.0000000000577   37-102   Complement control module/SCR domain  
ENSMPUP00000009771   0.00000000000000751   36-98   Complement control module/SCR domain  
  0.000000000000264   93-150   Complement control module/SCR domain  
ENSMPUP00000009776   5.8e-17   179-241   Complement control module/SCR domain  
  0.00000000000000175   117-189   Complement control module/SCR domain  
  0.0000000000000806   240-305   Complement control module/SCR domain  
  0.000000000000334   433-496   Complement control module/SCR domain  
  0.000000000000528   491-549   Complement control module/SCR domain  
  0.000000000162   305-377   Complement control module/SCR domain  
  0.000000000445   56-122   Complement control module/SCR domain  
  0.000000189   372-438   Complement control module/SCR domain  
ENSMPUP00000009780   2.7e-16   130-192   Complement control module/SCR domain  
  0.00000000000000473   79-147   Complement control module/SCR domain  
  0.0000000000625   21-86   Complement control module/SCR domain  
ENSMPUP00000010014   0.00000000000032   450-508   Complement control module/SCR domain  
  0.00000000000183   206-263   Complement control module/SCR domain  
  0.00000000000769   267-323   Complement control module/SCR domain  
  0.000000000017   389-443   Complement control module/SCR domain  
  0.000000000301   146-203   Complement control module/SCR domain  
  0.0000000584   90-143   Complement control module/SCR domain  
  0.0000208   23-88   Complement control module/SCR domain  
  0.0000341   330-382   Complement control module/SCR domain  
  0.00687   508-537   Complement control module/SCR domain  
ENSMPUP00000010026   1.08e-21   581-658   Complement control module/SCR domain  
  4.98e-19   453-529   Complement control module/SCR domain  
  0.0000000000000249   206-268   Complement control module/SCR domain  
  0.0000000000000944   334-389   Complement control module/SCR domain  
  0.00000000000144   396-455   Complement control module/SCR domain  
  0.00000000000511   273-327   Complement control module/SCR domain  
  0.0000000000104   524-583   Complement control module/SCR domain  
  0.00000000144   86-148   Complement control module/SCR domain  
  0.0000000104   155-214   Complement control module/SCR domain  
  0.00000446   26-95   Complement control module/SCR domain  
ENSMPUP00000010510   0.000000000000729   163-222   Complement control module/SCR domain  
  0.00000000181   39-100   Complement control module/SCR domain  
  0.0000000167   100-161   Complement control module/SCR domain  
ENSMPUP00000010553   0.000000000000181   514-574   Complement control module/SCR domain  
  0.000000000000792   580-636   Complement control module/SCR domain  
  0.00000000000292   2-58   Complement control module/SCR domain  
  0.000012   455-500   Complement control module/SCR domain  
ENSMPUP00000011617   0.0000000000000973   280-350   Complement control module/SCR domain  
ENSMPUP00000012049   3.12e-19   1171-1233   Complement control module/SCR domain  
  3.91e-16   144-215   Complement control module/SCR domain  
  0.0000000000000459   85-155   Complement control module/SCR domain  
  0.000000000000157   1114-1174   Complement control module/SCR domain  
  0.00000000000249   1047-1108   Complement control module/SCR domain  
  0.00000000000511   626-682   Complement control module/SCR domain  
  0.00000000000944   560-622   Complement control module/SCR domain  
  0.0000000000102   687-743   Complement control module/SCR domain  
  0.0000000000275   865-939   Complement control module/SCR domain  
  0.0000000000419   262-324   Complement control module/SCR domain  
  0.00000000011   205-264   Complement control module/SCR domain  
  0.000000000157   928-991   Complement control module/SCR domain  
  0.000000000328   808-872   Complement control module/SCR domain  
  0.000000000996   507-570   Complement control module/SCR domain  
  0.0000000105   453-511   Complement control module/SCR domain  
  0.0000000197   29-89   Complement control module/SCR domain  
  0.0000000702   988-1051   Complement control module/SCR domain  
  0.000000747   388-442   Complement control module/SCR domain  
  0.000347   317-383   Complement control module/SCR domain  
  0.0175   765-803   Complement control module/SCR domain  
ENSMPUP00000012055   1.44e-16   499-562   Complement control module/SCR domain  
  0.00000000000025   440-501   Complement control module/SCR domain  
  0.00000000000249   311-366   Complement control module/SCR domain  
  0.00000000000567   249-307   Complement control module/SCR domain  
  0.00000000000708   119-181   Complement control module/SCR domain  
  0.0000000000175   185-240   Complement control module/SCR domain  
  0.00000000132   66-129   Complement control module/SCR domain  
  0.00000000904   10-62   Complement control module/SCR domain  
ENSMPUP00000012085   8.52e-20   306-367   Complement control module/SCR domain  
  0.0000000000000115   248-308   Complement control module/SCR domain  
  0.00000000324   133-190   Complement control module/SCR domain  
  0.0000000202   71-122   Complement control module/SCR domain  
  0.0000000236   186-242   Complement control module/SCR domain  
  0.0000723   2-65   Complement control module/SCR domain  
ENSMPUP00000012393   0.00000000000000264   289-351   Complement control module/SCR domain  
  0.000000000000144   643-701   Complement control module/SCR domain  
  0.000000000000167   703-764   Complement control module/SCR domain  
  0.00000000000433   771-829   Complement control module/SCR domain  
  0.0000000511   464-529   Complement control module/SCR domain  
ENSMPUP00000012486   0.0000000000000222   116-177   Complement control module/SCR domain  
  0.0000000000000264   263-321   Complement control module/SCR domain  
  0.000000000848   79-131   Complement control module/SCR domain  
ENSMPUP00000012729   0.00000588   739-791   Complement control module/SCR domain  
ENSMPUP00000012999   0.000000076   132-190   Complement control module/SCR domain  
ENSMPUP00000013526   0.0000000000000148   752-817   Complement control module/SCR domain  
  0.000000000000709   811-873   Complement control module/SCR domain  
  0.00000000000121   879-938   Complement control module/SCR domain  
  0.0000000000167   399-460   Complement control module/SCR domain  
  0.000000000944   574-638   Complement control module/SCR domain  
ENSMPUP00000014010   0.00000000000000216   578-643   Complement control module/SCR domain  
  0.000000000000668   637-699   Complement control module/SCR domain  
  0.00000000000773   704-764   Complement control module/SCR domain  
  0.0000000000278   224-288   Complement control module/SCR domain  
  0.000000000111   400-464   Complement control module/SCR domain  
ENSMPUP00000014449   0.000000000594   663-726   Complement control module/SCR domain  
  0.0000000324   717-773   Complement control module/SCR domain  
ENSMPUP00000014552   6.41e-21   264-345   Complement control module/SCR domain  
  2.08e-16   83-148   Complement control module/SCR domain  
  0.000000000000275   140-214   Complement control module/SCR domain  
  0.00000000000249   205-265   Complement control module/SCR domain  
  0.0000000000288   22-93   Complement control module/SCR domain  
ENSMPUP00000014635   0.0000000000403   572-636   Complement control module/SCR domain  
  0.0000000264   627-683   Complement control module/SCR domain  
ENSMPUP00000014846   1.67e-18   2410-2478   Complement control module/SCR domain  
  2.5e-18   2766-2837   Complement control module/SCR domain  
  8.34e-18   2650-2718   Complement control module/SCR domain  
  1.01e-17   2826-2895   Complement control module/SCR domain  
  3.24e-16   2467-2534   Complement control module/SCR domain  
  5.42e-16   2946-3014   Complement control module/SCR domain  
  0.00000000000000292   2707-2777   Complement control module/SCR domain  
  0.00000000000000324   74-146   Complement control module/SCR domain  
  0.00000000000000556   2158-2231   Complement control module/SCR domain  
  0.00000000000000998   1814-1882   Complement control module/SCR domain  
  0.0000000000000148   2221-2288   Complement control module/SCR domain  
  0.0000000000000364   1641-1703   Complement control module/SCR domain  
  0.0000000000000621   2527-2594   Complement control module/SCR domain  
  0.0000000000000778   2341-2403   Complement control module/SCR domain  
  0.0000000000000945   2583-2643   Complement control module/SCR domain  
  0.000000000000208   598-658   Complement control module/SCR domain  
  0.000000000000229   941-1003   Complement control module/SCR domain  
  0.000000000000229   1116-1179   Complement control module/SCR domain  
  0.000000000000278   2878-2940   Complement control module/SCR domain  
  0.0000000000005   252-314   Complement control module/SCR domain  
  0.000000000000634   1984-2048   Complement control module/SCR domain  
  0.000000000000836   1290-1357   Complement control module/SCR domain  
  0.00000000000459   423-491   Complement control module/SCR domain  
  0.00000000000834   1467-1530   Complement control module/SCR domain  
  0.0000000000124   3001-3063   Complement control module/SCR domain  
  0.0000000000208   2283-2358   Complement control module/SCR domain  
  0.0000000000243   771-833   Complement control module/SCR domain  
ENSMPUP00000015323   0.000000000000473   1233-1293   Complement control module/SCR domain  
ENSMPUP00000015400   9.45e-17   262-328   Complement control module/SCR domain  
  0.00000000000000306   200-264   Complement control module/SCR domain  
  0.00000000000000486   565-630   Complement control module/SCR domain  
  0.00000000000000709   698-763   Complement control module/SCR domain  
  0.00000000000000959   317-383   Complement control module/SCR domain  
  0.0000000000000114   441-506   Complement control module/SCR domain  
  0.0000000000000115   510-574   Complement control module/SCR domain  
  0.0000000000000208   643-708   Complement control module/SCR domain  
  0.000000000000125   384-457   Complement control module/SCR domain  
ENSMPUP00000015403   0.000000000000445   197-263   Complement control module/SCR domain  
  0.00000000111   257-319   Complement control module/SCR domain  
ENSMPUP00000015419   3.34e-16   303-377   Complement control module/SCR domain  
  0.00000000000000222   241-314   Complement control module/SCR domain  
  0.000000000000113   367-440   Complement control module/SCR domain  
  0.000000000000117   429-497   Complement control module/SCR domain  
  0.00000000000222   181-246   Complement control module/SCR domain  
  0.00000000000389   489-550   Complement control module/SCR domain  
ENSMPUP00000015706   0.00000000000417   2128-2188   Complement control module/SCR domain  
ENSMPUP00000016244   0.00000000000132   28-93   Complement control module/SCR domain  
ENSMPUP00000016253   0.000000000162   115-176   Complement control module/SCR domain  
  0.000000364   23-80   Complement control module/SCR domain  
ENSMPUP00000016336   0.000000000000222   369-439   Complement control module/SCR domain  
  0.000000000000639   303-372   Complement control module/SCR domain  
ENSMPUP00000016654   0.00000438   183-230   Complement control module/SCR domain  
ENSMPUP00000016655   0.000000000000278   376-456   Complement control module/SCR domain  
  0.00000000000334   308-379   Complement control module/SCR domain  
ENSMPUP00000016656   0.000000000000208   365-435   Complement control module/SCR domain  
  0.0000000000131   305-368   Complement control module/SCR domain  
 
Weak hits:
ENSMPUP00000012127   0.000301   587-632   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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