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  Home > Genomes > Nomascus leucogenys 69_1.0 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Nomascus leucogenys 69_1.0

Assignment details

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Nomascus leucogenys 69_1.0 has 265 significant domains in 46 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000341   1.19e-20   264-345   Complement control module/SCR domain  
  9.87e-17   83-149   Complement control module/SCR domain  
  0.000000000000058   205-267   Complement control module/SCR domain  
  0.00000000000202   140-214   Complement control module/SCR domain  
  0.000000000089   22-93   Complement control module/SCR domain  
ENSNLEP00000000553   0.0000000000000737   180-252   Complement control module/SCR domain  
  0.00000000031   242-302   Complement control module/SCR domain  
  0.000000000834   56-112   Complement control module/SCR domain  
  0.0000000132   117-178   Complement control module/SCR domain  
ENSNLEP00000001160   0.00000000000000167   30-93   Complement control module/SCR domain  
  0.0000000000000297   91-156   Complement control module/SCR domain  
  0.000000000000584   283-345   Complement control module/SCR domain  
  0.00000000000236   340-398   Complement control module/SCR domain  
  0.00000000351   156-225   Complement control module/SCR domain  
  0.00000114   217-279   Complement control module/SCR domain  
  0.00000959   1-41   Complement control module/SCR domain  
ENSNLEP00000001259   1.06e-18   101-173   Complement control module/SCR domain  
  7.92e-16   162-223   Complement control module/SCR domain  
  0.000000000139   38-105   Complement control module/SCR domain  
ENSNLEP00000001290   0.0000000000000181   249-307   Complement control module/SCR domain  
  0.0000000000000208   102-163   Complement control module/SCR domain  
  0.00000000111   65-117   Complement control module/SCR domain  
ENSNLEP00000001345   8.48e-19   525-594   Complement control module/SCR domain  
  2.08e-16   910-974   Complement control module/SCR domain  
  2.5e-16   274-343   Complement control module/SCR domain  
  2.78e-16   776-838   Complement control module/SCR domain  
  8.76e-16   153-224   Complement control module/SCR domain  
  0.00000000000000167   409-472   Complement control module/SCR domain  
  0.00000000000000292   661-723   Complement control module/SCR domain  
  0.00000000000000431   349-419   Complement control module/SCR domain  
  0.00000000000000723   600-670   Complement control module/SCR domain  
  0.0000000000000181   21-83   Complement control module/SCR domain  
  0.000000000000625   964-1028   Complement control module/SCR domain  
  0.000000000000903   88-149   Complement control module/SCR domain  
  0.00000000000195   845-904   Complement control module/SCR domain  
  0.00000000000459   214-285   Complement control module/SCR domain  
  0.0000000139   740-787   Complement control module/SCR domain  
  0.0000135   490-536   Complement control module/SCR domain  
ENSNLEP00000001352   2.1e-18   92-164   Complement control module/SCR domain  
  9.83e-18   153-221   Complement control module/SCR domain  
  1.95e-17   409-481   Complement control module/SCR domain  
  6.67e-16   470-539   Complement control module/SCR domain  
  0.00000000000000367   285-350   Complement control module/SCR domain  
  0.0000000000000603   228-290   Complement control module/SCR domain  
  0.00000000000389   353-419   Complement control module/SCR domain  
  0.0000000000957   32-97   Complement control module/SCR domain  
ENSNLEP00000001576   1.17e-16   98-171   Complement control module/SCR domain  
  7.23e-16   223-287   Complement control module/SCR domain  
  0.000000000000681   155-225   Complement control module/SCR domain  
  0.0000486   35-89   Complement control module/SCR domain  
ENSNLEP00000001900   0.000000000297   41-102   Complement control module/SCR domain  
ENSNLEP00000001905   3.06e-16   79-147   Complement control module/SCR domain  
ENSNLEP00000003899   0.00000000000000264   712-777   Complement control module/SCR domain  
  0.000000000000486   772-844   Complement control module/SCR domain  
  0.00000000000556   356-421   Complement control module/SCR domain  
  0.0000000000264   838-898   Complement control module/SCR domain  
  0.00000000167   532-591   Complement control module/SCR domain  
ENSNLEP00000004195   5.4e-18   3010-3078   Complement control module/SCR domain  
  1.33e-17   2833-2900   Complement control module/SCR domain  
  1.05e-16   2949-3015   Complement control module/SCR domain  
  1.81e-16   2714-2776   Complement control module/SCR domain  
  5.67e-16   3129-3197   Complement control module/SCR domain  
  7.51e-16   2890-2960   Complement control module/SCR domain  
  0.00000000000000106   342-414   Complement control module/SCR domain  
  0.00000000000000361   2655-2718   Complement control module/SCR domain  
  0.0000000000000113   2122-2190   Complement control module/SCR domain  
  0.0000000000000117   2466-2539   Complement control module/SCR domain  
  0.0000000000000337   1907-1969   Complement control module/SCR domain  
  0.000000000000135   2529-2596   Complement control module/SCR domain  
  0.000000000000167   2766-2826   Complement control module/SCR domain  
  0.000000000000208   3061-3123   Complement control module/SCR domain  
  0.000000000000222   866-926   Complement control module/SCR domain  
  0.000000000000278   138-199   Complement control module/SCR domain  
  0.000000000000278   1384-1447   Complement control module/SCR domain  
  0.000000000000556   520-582   Complement control module/SCR domain  
  0.000000000000648   1556-1623   Complement control module/SCR domain  
  0.000000000000863   1209-1272   Complement control module/SCR domain  
  0.0000000000031   1039-1101   Complement control module/SCR domain  
  0.00000000000324   2292-2356   Complement control module/SCR domain  
  0.00000000000445   1733-1796   Complement control module/SCR domain  
  0.00000000000473   691-759   Complement control module/SCR domain  
  0.00000000000778   3188-3247   Complement control module/SCR domain  
  0.0000000000101   2601-2666   Complement control module/SCR domain  
ENSNLEP00000005525   0.0000000774   139-197   Complement control module/SCR domain  
ENSNLEP00000005772   3.78e-20   3171-3242   Complement control module/SCR domain  
  7.83e-19   2816-2884   Complement control module/SCR domain  
  3.75e-18   3055-3123   Complement control module/SCR domain  
  3.91e-18   2873-2941   Complement control module/SCR domain  
  4.05e-18   2931-3004   Complement control module/SCR domain  
  9.87e-18   3112-3182   Complement control module/SCR domain  
  8.5e-17   3231-3300   Complement control module/SCR domain  
  2.64e-16   2757-2826   Complement control module/SCR domain  
  0.00000000000000113   3290-3346   Complement control module/SCR domain  
  0.00000000000000113   2223-2292   Complement control module/SCR domain  
  0.00000000000000153   485-556   Complement control module/SCR domain  
  0.00000000000000202   2630-2697   Complement control module/SCR domain  
  0.00000000000000459   2987-3048   Complement control module/SCR domain  
  0.00000000000000542   3351-3419   Complement control module/SCR domain  
  0.0000000000000181   2568-2641   Complement control module/SCR domain  
  0.0000000000000391   2051-2113   Complement control module/SCR domain  
  0.0000000000000432   1527-1591   Complement control module/SCR domain  
  0.0000000000001   1700-1765   Complement control module/SCR domain  
  0.000000000000139   663-722   Complement control module/SCR domain  
  0.000000000000148   1009-1069   Complement control module/SCR domain  
  0.000000000000208   1877-1943   Complement control module/SCR domain  
  0.00000000000031   1182-1244   Complement control module/SCR domain  
  0.000000000000513   177-238   Complement control module/SCR domain  
  0.00000000000133   1353-1415   Complement control module/SCR domain  
  0.00000000000195   3410-3468   Complement control module/SCR domain  
  0.00000000000378   834-902   Complement control module/SCR domain  
  0.00000000000431   2702-2764   Complement control module/SCR domain  
  0.0000000000702   2394-2457   Complement control module/SCR domain  
ENSNLEP00000006221   0.000000000000278   359-429   Complement control module/SCR domain  
  0.0000000000101   298-362   Complement control module/SCR domain  
ENSNLEP00000006233   0.000079   190-236   Complement control module/SCR domain  
ENSNLEP00000006901   0.00000000174   68-130   Complement control module/SCR domain  
ENSNLEP00000007842   0.0000000000000446   386-447   Complement control module/SCR domain  
  0.000000000000945   453-509   Complement control module/SCR domain  
  0.00000167   333-373   Complement control module/SCR domain  
ENSNLEP00000008150   0.0000000000000122   300-370   Complement control module/SCR domain  
ENSNLEP00000009126   1.57e-16   131-193   Complement control module/SCR domain  
  0.000000000000432   76-141   Complement control module/SCR domain  
  0.000000000375   22-87   Complement control module/SCR domain  
ENSNLEP00000009134   0.000000000000005   116-178   Complement control module/SCR domain  
  0.0000000000000264   263-323   Complement control module/SCR domain  
  0.0000000264   78-126   Complement control module/SCR domain  
ENSNLEP00000009240   0.0000000000000118   289-351   Complement control module/SCR domain  
  0.000000000000153   643-701   Complement control module/SCR domain  
  0.000000000000236   703-764   Complement control module/SCR domain  
  0.00000000000433   771-829   Complement control module/SCR domain  
  0.0000000511   464-529   Complement control module/SCR domain  
ENSNLEP00000009400   0.0000000000000324   636-693   Complement control module/SCR domain  
  0.00000000000102   762-821   Complement control module/SCR domain  
  0.0000000000278   282-343   Complement control module/SCR domain  
  0.000000000834   457-521   Complement control module/SCR domain  
ENSNLEP00000010264   0.000000000459   741-797   Complement control module/SCR domain  
ENSNLEP00000011589   0.00000000000000876   364-434   Complement control module/SCR domain  
  0.0000000000000181   298-367   Complement control module/SCR domain  
ENSNLEP00000014149   0.000000000000588   1-65   Complement control module/SCR domain  
ENSNLEP00000014170   0.0000000000121   124-184   Complement control module/SCR domain  
  0.00000000181   23-82   Complement control module/SCR domain  
ENSNLEP00000015444   0.000000000431   814-873   Complement control module/SCR domain  
ENSNLEP00000016203   0.000000000125   3292-3350   Complement control module/SCR domain  
ENSNLEP00000016634   0.00000000000737   697-766   Complement control module/SCR domain  
ENSNLEP00000018119   1.04e-19   2407-2475   Complement control module/SCR domain  
  4.59e-19   2763-2834   Complement control module/SCR domain  
  5.8e-18   2464-2533   Complement control module/SCR domain  
  1.39e-17   2647-2715   Complement control module/SCR domain  
  6.39e-17   2522-2595   Complement control module/SCR domain  
  9.17e-17   2823-2892   Complement control module/SCR domain  
  6.12e-16   2704-2774   Complement control module/SCR domain  
  0.00000000000000229   2943-3011   Complement control module/SCR domain  
  0.00000000000000243   1118-1182   Complement control module/SCR domain  
  0.00000000000000375   2221-2288   Complement control module/SCR domain  
  0.00000000000000556   2881-2938   Complement control module/SCR domain  
  0.0000000000000264   425-493   Complement control module/SCR domain  
  0.0000000000000278   943-1013   Complement control module/SCR domain  
  0.0000000000000292   255-316   Complement control module/SCR domain  
  0.0000000000000334   2348-2411   Complement control module/SCR domain  
  0.0000000000000459   2579-2641   Complement control module/SCR domain  
  0.0000000000000584   1292-1356   Complement control module/SCR domain  
  0.0000000000000648   2159-2232   Complement control module/SCR domain  
  0.000000000000138   75-148   Complement control module/SCR domain  
  0.000000000000167   1814-1883   Complement control module/SCR domain  
  0.000000000000175   600-660   Complement control module/SCR domain  
  0.000000000000189   1468-1531   Complement control module/SCR domain  
  0.00000000000162   1642-1706   Complement control module/SCR domain  
  0.00000000000391   1985-2049   Complement control module/SCR domain  
  0.00000000000542   773-833   Complement control module/SCR domain  
  0.0000000000625   3002-3059   Complement control module/SCR domain  
  0.000000000431   2303-2359   Complement control module/SCR domain  
ENSNLEP00000018249   7.51e-16   262-328   Complement control module/SCR domain  
  7.64e-16   317-383   Complement control module/SCR domain  
  9.44e-16   565-630   Complement control module/SCR domain  
  0.00000000000000264   441-507   Complement control module/SCR domain  
  0.00000000000000292   200-267   Complement control module/SCR domain  
  0.0000000000000208   503-569   Complement control module/SCR domain  
  0.0000000000000264   378-445   Complement control module/SCR domain  
  0.000000000000153   642-707   Complement control module/SCR domain  
  0.000000000000417   697-762   Complement control module/SCR domain  
ENSNLEP00000018255   0.0000000000000167   265-331   Complement control module/SCR domain  
  0.000000000000528   210-275   Complement control module/SCR domain  
ENSNLEP00000018287   0.00000000000000132   242-307   Complement control module/SCR domain  
  0.000000000000005   180-245   Complement control module/SCR domain  
  0.0000000000000104   296-364   Complement control module/SCR domain  
  0.0000000000000556   423-490   Complement control module/SCR domain  
  0.000000000000082   366-439   Complement control module/SCR domain  
  0.000000000000375   488-549   Complement control module/SCR domain  
ENSNLEP00000018693   3.75e-17   718-775   Complement control module/SCR domain  
ENSNLEP00000018784   0.000000000139   1524-1598   Complement control module/SCR domain  
  0.00000653   1590-1647   Complement control module/SCR domain  
  0.0000181   1469-1530   Complement control module/SCR domain  
  0.00393   1417-1467   Complement control module/SCR domain  
ENSNLEP00000019966   0.000000000236   142-200   Complement control module/SCR domain  
ENSNLEP00000020055   0.00000000000709   570-633   Complement control module/SCR domain  
  0.0000000292   625-681   Complement control module/SCR domain  
ENSNLEP00000020061   0.000000000431   31-93   Complement control module/SCR domain  
ENSNLEP00000020197   0.0000000000729   644-707   Complement control module/SCR domain  
  0.0000000499   699-754   Complement control module/SCR domain  
ENSNLEP00000020522   0.000000000292   1410-1473   Complement control module/SCR domain  
  0.00000000403   1346-1418   Complement control module/SCR domain  
  0.0000000222   1284-1350   Complement control module/SCR domain  
  0.00000674   1215-1288   Complement control module/SCR domain  
ENSNLEP00000021201   8.62e-20   880-949   Complement control module/SCR domain  
  2.5e-18   1567-1636   Complement control module/SCR domain  
  8.48e-18   1509-1578   Complement control module/SCR domain  
  1.06e-17   697-765   Complement control module/SCR domain  
  1.18e-17   1115-1185   Complement control module/SCR domain  
  1.39e-17   581-650   Complement control module/SCR domain  
  2.22e-17   1975-2044   Complement control module/SCR domain  
  2.64e-17   1451-1520   Complement control module/SCR domain  
  2.92e-17   523-592   Complement control module/SCR domain  
  6.25e-17   1232-1301   Complement control module/SCR domain  
  6.39e-17   999-1067   Complement control module/SCR domain  
  8.76e-17   424-482   Complement control module/SCR domain  
  1.95e-16   1290-1357   Complement control module/SCR domain  
  2.64e-16   1407-1462   Complement control module/SCR domain  
  2.78e-16   1625-1694   Complement control module/SCR domain  
  4.59e-16   2152-2211   Complement control module/SCR domain  
  0.00000000000000129   1799-1866   Complement control module/SCR domain  
  0.00000000000000139   2034-2099   Complement control module/SCR domain  
  0.00000000000000195   1174-1243   Complement control module/SCR domain  
  0.00000000000000417   1684-1746   Complement control module/SCR domain  
  0.00000000000000681   938-1009   Complement control module/SCR domain  
  0.000000000000011   640-702   Complement control module/SCR domain  
  0.000000000000106   367-435   Complement control module/SCR domain  
  0.000000000000639   1058-1126   Complement control module/SCR domain  
  0.00000000000167   1743-1809   Complement control module/SCR domain  
  0.00000000000278   754-822   Complement control module/SCR domain  
  0.00000000000542   1857-1920   Complement control module/SCR domain  
  0.00000000000612   2093-2161   Complement control module/SCR domain  
  0.000000000153   1916-1980   Complement control module/SCR domain  
  0.000000000208   819-886   Complement control module/SCR domain  
ENSNLEP00000021789   0.0000000000000945   296-366   Complement control module/SCR domain  
ENSNLEP00000021933   3.01e-20   1166-1230   Complement control module/SCR domain  
  0.0000000000000751   144-216   Complement control module/SCR domain  
  0.000000000000406   867-927   Complement control module/SCR domain  
  0.000000000000971   1109-1168   Complement control module/SCR domain  
  0.00000000000162   689-744   Complement control module/SCR domain  
  0.0000000000038   629-686   Complement control module/SCR domain  
  0.00000000000391   1041-1103   Complement control module/SCR domain  
  0.0000000000162   85-146   Complement control module/SCR domain  
  0.000000000017   924-985   Complement control module/SCR domain  
  0.000000000021   982-1044   Complement control module/SCR domain  
  0.000000000577   809-864   Complement control module/SCR domain  
  0.000000000839   561-624   Complement control module/SCR domain  
  0.00000000183   508-572   Complement control module/SCR domain  
  0.00000000275   205-264   Complement control module/SCR domain  
  0.00000000301   262-325   Complement control module/SCR domain  
  0.00000000472   454-512   Complement control module/SCR domain  
  0.0000000197   389-445   Complement control module/SCR domain  
  0.0000000262   30-89   Complement control module/SCR domain  
  0.000278   324-384   Complement control module/SCR domain  
  0.0229   766-803   Complement control module/SCR domain  
ENSNLEP00000021936   4.46e-22   206-268   Complement control module/SCR domain  
  0.0000000000000709   149-208   Complement control module/SCR domain  
  0.00000000556   85-142   Complement control module/SCR domain  
  0.00000181   23-87   Complement control module/SCR domain  
ENSNLEP00000021937   8.52e-21   581-660   Complement control module/SCR domain  
  4.98e-20   453-533   Complement control module/SCR domain  
  0.0000000000000202   206-268   Complement control module/SCR domain  
  0.000000000000537   333-389   Complement control module/SCR domain  
  0.00000000000288   396-455   Complement control module/SCR domain  
  0.00000000000836   273-327   Complement control module/SCR domain  
  0.0000000000197   522-578   Complement control module/SCR domain  
  0.00000000446   154-214   Complement control module/SCR domain  
  0.0000000354   89-148   Complement control module/SCR domain  
  0.00000367   25-95   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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