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  Home > Genomes > Equus caballus 69_2 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Equus caballus 69_2

Assignment details

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Equus caballus 69_2 has 323 significant domains in 55 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSECAP00000000180   5.67e-20   582-652   Complement control module/SCR domain  
  1.7e-18   454-532   Complement control module/SCR domain  
  0.000000000000021   206-268   Complement control module/SCR domain  
  0.0000000000000786   395-454   Complement control module/SCR domain  
  0.000000000000603   333-389   Complement control module/SCR domain  
  0.0000000000157   523-579   Complement control module/SCR domain  
  0.0000000000288   273-327   Complement control module/SCR domain  
  0.00000000485   154-214   Complement control module/SCR domain  
  0.0000000315   91-147   Complement control module/SCR domain  
  0.00000655   37-95   Complement control module/SCR domain  
ENSECAP00000003554   0.000000000000153   78-138   Complement control module/SCR domain  
  0.00000000000306   144-200   Complement control module/SCR domain  
  0.00000000792   17-92   Complement control module/SCR domain  
ENSECAP00000003694   0.00000000012   1277-1344   Complement control module/SCR domain  
  0.00000000292   1208-1280   Complement control module/SCR domain  
  0.0000000103   1146-1216   Complement control module/SCR domain  
  0.00000445   1077-1150   Complement control module/SCR domain  
ENSECAP00000004275   0.0000000000000085   5-64   Complement control module/SCR domain  
ENSECAP00000004821   0.00000000148   2-58   Complement control module/SCR domain  
ENSECAP00000004987   1.57e-20   589-653   Complement control module/SCR domain  
  0.000000000000107   347-408   Complement control module/SCR domain  
  0.00000000000117   530-585   Complement control module/SCR domain  
  0.00000000000223   51-108   Complement control module/SCR domain  
  0.00000000000341   292-363   Complement control module/SCR domain  
  0.00000000000406   469-525   Complement control module/SCR domain  
  0.00000000000513   114-168   Complement control module/SCR domain  
  0.0000000000702   405-467   Complement control module/SCR domain  
  0.00000000175   231-286   Complement control module/SCR domain  
  0.0000000769   6-49   Complement control module/SCR domain  
  0.00175   176-225   Complement control module/SCR domain  
ENSECAP00000005772   5.4e-21   3168-3239   Complement control module/SCR domain  
  7.42e-19   2813-2881   Complement control module/SCR domain  
  2.97e-18   2870-2938   Complement control module/SCR domain  
  4.05e-18   2928-3001   Complement control module/SCR domain  
  5.42e-18   3109-3179   Complement control module/SCR domain  
  9.17e-18   3052-3120   Complement control module/SCR domain  
  4.31e-17   2754-2823   Complement control module/SCR domain  
  8.36e-17   3228-3297   Complement control module/SCR domain  
  0.00000000000000153   485-556   Complement control module/SCR domain  
  0.00000000000000208   2627-2694   Complement control module/SCR domain  
  0.0000000000000025   3287-3343   Complement control module/SCR domain  
  0.00000000000000283   2223-2292   Complement control module/SCR domain  
  0.00000000000000347   3348-3416   Complement control module/SCR domain  
  0.000000000000005   2984-3045   Complement control module/SCR domain  
  0.0000000000000181   2565-2638   Complement control module/SCR domain  
  0.0000000000000378   1009-1069   Complement control module/SCR domain  
  0.0000000000000391   2051-2113   Complement control module/SCR domain  
  0.0000000000000432   1527-1591   Complement control module/SCR domain  
  0.0000000000001   1700-1765   Complement control module/SCR domain  
  0.000000000000139   663-722   Complement control module/SCR domain  
  0.000000000000292   1877-1943   Complement control module/SCR domain  
  0.000000000000634   177-238   Complement control module/SCR domain  
  0.00000000000104   1182-1244   Complement control module/SCR domain  
  0.00000000000133   1353-1415   Complement control module/SCR domain  
  0.00000000000195   3407-3465   Complement control module/SCR domain  
  0.00000000000337   834-901   Complement control module/SCR domain  
  0.00000000000528   2701-2765   Complement control module/SCR domain  
  0.0000000000702   2394-2457   Complement control module/SCR domain  
ENSECAP00000005919   0.00000000000598   2053-2111   Complement control module/SCR domain  
ENSECAP00000005951   0.0000000573   121-179   Complement control module/SCR domain  
ENSECAP00000006820   0.000000000000032   300-370   Complement control module/SCR domain  
ENSECAP00000006957   5.28e-16   308-382   Complement control module/SCR domain  
  8.06e-16   248-314   Complement control module/SCR domain  
  0.0000000000000195   372-445   Complement control module/SCR domain  
  0.0000000000000208   186-251   Complement control module/SCR domain  
  0.0000000000000236   429-496   Complement control module/SCR domain  
  0.000000000000347   494-555   Complement control module/SCR domain  
ENSECAP00000007802   7.92e-18   107-180   Complement control module/SCR domain  
  0.00000000000000459   232-293   Complement control module/SCR domain  
  0.00000000000000459   171-240   Complement control module/SCR domain  
  0.00000000000249   44-117   Complement control module/SCR domain  
ENSECAP00000007898   0.00000000000107   365-435   Complement control module/SCR domain  
  0.00000000000806   306-368   Complement control module/SCR domain  
ENSECAP00000008138   0.00000000208   74-130   Complement control module/SCR domain  
  0.00000375   27-74   Complement control module/SCR domain  
ENSECAP00000009403   6.25e-16   500-567   Complement control module/SCR domain  
  0.0000000000000012   255-321   Complement control module/SCR domain  
  0.00000000000000136   200-266   Complement control module/SCR domain  
  0.00000000000000904   563-628   Complement control module/SCR domain  
  0.0000000000000153   377-444   Complement control module/SCR domain  
  0.0000000000000431   440-505   Complement control module/SCR domain  
  0.0000000000000445   640-706   Complement control module/SCR domain  
  0.0000000000000688   322-394   Complement control module/SCR domain  
  0.000000000000292   695-760   Complement control module/SCR domain  
ENSECAP00000009569   0.000000000944   2-63   Complement control module/SCR domain  
ENSECAP00000009652   5.24e-18   908-969   Complement control module/SCR domain  
  0.000000000000144   850-909   Complement control module/SCR domain  
  0.000000000000236   666-727   Complement control module/SCR domain  
  0.00000000000236   363-421   Complement control module/SCR domain  
  0.00000000000839   783-844   Complement control module/SCR domain  
  0.00000000000983   426-480   Complement control module/SCR domain  
  0.0000000000297   724-787   Complement control module/SCR domain  
  0.0000000000367   602-682   Complement control module/SCR domain  
  0.000000000262   543-598   Complement control module/SCR domain  
  0.00000000288   5-66   Complement control module/SCR domain  
  0.00000000288   299-360   Complement control module/SCR domain  
  0.0000000102   191-248   Complement control module/SCR domain  
  0.0000000668   244-308   Complement control module/SCR domain  
  0.00000197   124-181   Complement control module/SCR domain  
  0.000364   489-553   Complement control module/SCR domain  
  0.00058   55-121   Complement control module/SCR domain  
ENSECAP00000009660   4.06e-20   1172-1236   Complement control module/SCR domain  
  0.0000000000000486   143-213   Complement control module/SCR domain  
  0.0000000000000524   85-146   Complement control module/SCR domain  
  0.000000000000498   930-991   Complement control module/SCR domain  
  0.00000000000157   1114-1173   Complement control module/SCR domain  
  0.00000000000616   1052-1108   Complement control module/SCR domain  
  0.00000000000721   627-684   Complement control module/SCR domain  
  0.0000000000275   689-744   Complement control module/SCR domain  
  0.0000000000769   988-1050   Complement control module/SCR domain  
  0.000000000723   209-270   Complement control module/SCR domain  
  0.00000000122   262-325   Complement control module/SCR domain  
  0.00000000243   807-862   Complement control module/SCR domain  
  0.0000000025   563-624   Complement control module/SCR domain  
  0.00000000537   31-89   Complement control module/SCR domain  
  0.0000000076   393-450   Complement control module/SCR domain  
  0.0000000107   866-940   Complement control module/SCR domain  
  0.0000000236   509-572   Complement control module/SCR domain  
  0.00000008   454-512   Complement control module/SCR domain  
  0.000607   751-801   Complement control module/SCR domain  
  0.0021   318-384   Complement control module/SCR domain  
ENSECAP00000010008   0.00000000000000584   60-132   Complement control module/SCR domain  
  0.00000000000025   115-186   Complement control module/SCR domain  
  0.00000000000139   184-246   Complement control module/SCR domain  
  0.0000000931   2-65   Complement control module/SCR domain  
ENSECAP00000010260   7.51e-17   73-146   Complement control module/SCR domain  
  0.00000000000000236   198-259   Complement control module/SCR domain  
  0.00000000000000917   130-200   Complement control module/SCR domain  
  0.00000000000249   10-83   Complement control module/SCR domain  
ENSECAP00000010299   0.000000000000195   180-239   Complement control module/SCR domain  
  0.000000000162   243-304   Complement control module/SCR domain  
  0.000000000513   56-118   Complement control module/SCR domain  
  0.0000000275   117-178   Complement control module/SCR domain  
ENSECAP00000010339   0.000000000000153   98-159   Complement control module/SCR domain  
  0.000000000000347   164-220   Complement control module/SCR domain  
  0.00000459   44-84   Complement control module/SCR domain  
ENSECAP00000010424   0.000000000032   570-633   Complement control module/SCR domain  
  0.00000000639   625-681   Complement control module/SCR domain  
ENSECAP00000011409   1.33e-16   179-241   Complement control module/SCR domain  
  1.48e-16   118-189   Complement control module/SCR domain  
  0.0000000000000138   240-305   Complement control module/SCR domain  
  0.0000000000005   488-545   Complement control module/SCR domain  
  0.00000000000202   433-493   Complement control module/SCR domain  
  0.00000000000351   56-122   Complement control module/SCR domain  
  0.0000000054   305-376   Complement control module/SCR domain  
  0.00000105   368-431   Complement control module/SCR domain  
ENSECAP00000011924   0.0000029   185-232   Complement control module/SCR domain  
ENSECAP00000012598   0.00000000000000347   116-178   Complement control module/SCR domain  
  0.0000000000000167   263-322   Complement control module/SCR domain  
  0.0000000181   78-126   Complement control module/SCR domain  
ENSECAP00000012602   5.4e-19   504-576   Complement control module/SCR domain  
  1.89e-18   1407-1479   Complement control module/SCR domain  
  4.45e-18   954-1026   Complement control module/SCR domain  
  1.08e-16   565-633   Complement control module/SCR domain  
  1.08e-16   1015-1083   Complement control module/SCR domain  
  1.15e-16   54-125   Complement control module/SCR domain  
  2.22e-16   369-438   Complement control module/SCR domain  
  5.42e-16   820-888   Complement control module/SCR domain  
  8.34e-16   247-312   Complement control module/SCR domain  
  0.00000000000000136   1723-1792   Complement control module/SCR domain  
  0.00000000000000222   1798-1866   Complement control module/SCR domain  
  0.00000000000000661   1148-1209   Complement control module/SCR domain  
  0.00000000000000709   114-182   Complement control module/SCR domain  
  0.0000000000000119   1601-1663   Complement control module/SCR domain  
  0.0000000000000189   185-247   Complement control module/SCR domain  
  0.0000000000000195   1468-1536   Complement control module/SCR domain  
  0.0000000000000361   1090-1153   Complement control module/SCR domain  
  0.0000000000000681   1270-1339   Complement control module/SCR domain  
  0.000000000000117   640-703   Complement control module/SCR domain  
  0.000000000000153   1667-1734   Complement control module/SCR domain  
  0.000000000000216   697-754   Complement control module/SCR domain  
  0.000000000000222   312-380   Complement control module/SCR domain  
  0.000000000000334   1855-1917   Complement control module/SCR domain  
  0.000000000000528   1542-1605   Complement control module/SCR domain  
  0.00000000000131   1214-1281   Complement control module/SCR domain  
  0.00000000000862   764-831   Complement control module/SCR domain  
  0.000000000054   444-509   Complement control module/SCR domain  
  0.000000000202   1347-1413   Complement control module/SCR domain  
  0.000000000695   894-958   Complement control module/SCR domain  
  0.000000405   12-64   Complement control module/SCR domain  
ENSECAP00000013090   0.0000000000025   27-89   Complement control module/SCR domain  
ENSECAP00000013738   0.00000000000118   1078-1138   Complement control module/SCR domain  
ENSECAP00000014469   4.33e-18   159-231   Complement control module/SCR domain  
  7.42e-16   220-281   Complement control module/SCR domain  
  0.00000000000057   33-99   Complement control module/SCR domain  
  0.0000000000032   95-169   Complement control module/SCR domain  
ENSECAP00000015274   0.00000000000000341   219-281   Complement control module/SCR domain  
  0.000000000000126   573-631   Complement control module/SCR domain  
  0.000000000000195   633-694   Complement control module/SCR domain  
  0.00000000000367   701-759   Complement control module/SCR domain  
  0.0000000433   394-459   Complement control module/SCR domain  
ENSECAP00000015468   0.00000000000000391   697-762   Complement control module/SCR domain  
  0.000000000000612   756-818   Complement control module/SCR domain  
  0.00000000000528   343-408   Complement control module/SCR domain  
  0.0000000000131   823-883   Complement control module/SCR domain  
  0.000000000133   519-583   Complement control module/SCR domain  
ENSECAP00000015506   0.000000000001   143-214   Complement control module/SCR domain  
  0.0000000000751   203-263   Complement control module/SCR domain  
ENSECAP00000015557   0.000000000181   814-873   Complement control module/SCR domain  
ENSECAP00000015611   0.000000000000131   273-343   Complement control module/SCR domain  
ENSECAP00000015713   0.0000000000621   105-166   Complement control module/SCR domain  
  0.00000000121   4-64   Complement control module/SCR domain  
ENSECAP00000016726   0.0000000000000153   62-123   Complement control module/SCR domain  
  0.0000000000000208   209-267   Complement control module/SCR domain  
  0.000000000486   25-77   Complement control module/SCR domain  
ENSECAP00000017093   0.0000000000181   1951-2010   Complement control module/SCR domain  
ENSECAP00000017664   0.0000000000000514   264-330   Complement control module/SCR domain  
  0.000000000000113   209-274   Complement control module/SCR domain  
ENSECAP00000018271   1.2e-16   79-148   Complement control module/SCR domain  
ENSECAP00000019071   0.00000000201   32-94   Complement control module/SCR domain  
ENSECAP00000019132   0.00000000000124   376-455   Complement control module/SCR domain  
  0.00000000000695   308-379   Complement control module/SCR domain  
ENSECAP00000019408   0.000000000513   644-706   Complement control module/SCR domain  
  0.000000944   699-754   Complement control module/SCR domain  
ENSECAP00000019472   0.0000000000000292   366-436   Complement control module/SCR domain  
  0.0000000000000403   299-369   Complement control module/SCR domain  
ENSECAP00000019644   3.34e-16   2-64   Complement control module/SCR domain  
  0.0000000000000917   59-116   Complement control module/SCR domain  
ENSECAP00000019727   2.24e-20   264-345   Complement control module/SCR domain  
  1.1e-16   83-148   Complement control module/SCR domain  
  0.0000000000000264   140-214   Complement control module/SCR domain  
  0.00000000000202   205-265   Complement control module/SCR domain  
  0.000000000115   22-93   Complement control module/SCR domain  
ENSECAP00000019748   1.81e-18   1959-2027   Complement control module/SCR domain  
  1.95e-18   2142-2210   Complement control module/SCR domain  
  2.64e-18   1843-1912   Complement control module/SCR domain  
  4.45e-18   2829-2898   Complement control module/SCR domain  
  4.59e-18   3237-3306   Complement control module/SCR domain  
  9.31e-18   2771-2840   Complement control module/SCR domain  
  1.67e-17   1785-1854   Complement control module/SCR domain  
  3.06e-17   2377-2447   Complement control module/SCR domain  
  3.61e-17   2887-2956   Complement control module/SCR domain  
  9.03e-17   2713-2782   Complement control module/SCR domain  
  1.36e-16   1686-1744   Complement control module/SCR domain  
  1.81e-16   3061-3129   Complement control module/SCR domain  
  2.22e-16   2552-2619   Complement control module/SCR domain  
  3.47e-16   2261-2329   Complement control module/SCR domain  
  4.86e-16   2671-2724   Complement control module/SCR domain  
  8.34e-16   2436-2505   Complement control module/SCR domain  
  0.00000000000000167   2494-2557   Complement control module/SCR domain  
  0.00000000000000195   3414-3473   Complement control module/SCR domain  
  0.00000000000000806   2946-3008   Complement control module/SCR domain  
  0.000000000000012   1901-1964   Complement control module/SCR domain  
  0.0000000000000195   3296-3362   Complement control module/SCR domain  
  0.0000000000000459   436-502   Complement control module/SCR domain  
  0.000000000000764   3005-3070   Complement control module/SCR domain  
  0.000000000001   375-446   Complement control module/SCR domain  
  0.00000000000222   1626-1692   Complement control module/SCR domain  
  0.00000000000222   2016-2084   Complement control module/SCR domain  
  0.00000000000556   3118-3186   Complement control module/SCR domain  
  0.00000000000612   3355-3423   Complement control module/SCR domain  
  0.00000000000723   2320-2388   Complement control module/SCR domain  
  0.00000000000778   2202-2266   Complement control module/SCR domain  
  0.000000000181   3179-3241   Complement control module/SCR domain  
  0.000000000681   2081-2147   Complement control module/SCR domain  
  0.0000153   495-558   Complement control module/SCR domain  
  0.00096   726-786   Complement control module/SCR domain  
ENSECAP00000020064   1.22e-16   86-158   Complement control module/SCR domain  
  1.27e-16   148-210   Complement control module/SCR domain  
  0.00000000000000262   209-274   Complement control module/SCR domain  
  0.000000000000367   25-90   Complement control module/SCR domain  
  0.00000000000459   444-502   Complement control module/SCR domain  
  0.00000000017   280-345   Complement control module/SCR domain  
  0.00000109   336-403   Complement control module/SCR domain  
ENSECAP00000021202   0.0000000000000104   515-580   Complement control module/SCR domain  
  0.000000000000514   574-636   Complement control module/SCR domain  
  0.000000000000865   642-701   Complement control module/SCR domain  
  0.00000000001   162-223   Complement control module/SCR domain  
  0.000000000364   337-401   Complement control module/SCR domain  
ENSECAP00000022021   1.67e-18   2565-2633   Complement control module/SCR domain  
  2.56e-18   2921-2992   Complement control module/SCR domain  
  2.92e-17   2805-2872   Complement control module/SCR domain  
  5.8e-17   2622-2689   Complement control module/SCR domain  
  4.73e-16   3102-3170   Complement control module/SCR domain  
  0.00000000000000106   210-282   Complement control module/SCR domain  
  0.0000000000000011   2862-2932   Complement control module/SCR domain  
  0.00000000000000621   1949-2017   Complement control module/SCR domain  
  0.00000000000000675   2976-3037   Complement control module/SCR domain  
  0.0000000000000153   2476-2538   Complement control module/SCR domain  
  0.0000000000000202   6-67   Complement control module/SCR domain  
  0.0000000000000324   1776-1839   Complement control module/SCR domain  
  0.0000000000000486   2293-2366   Complement control module/SCR domain  
  0.000000000000103   2738-2798   Complement control module/SCR domain  
  0.000000000000189   2356-2423   Complement control module/SCR domain  
  0.000000000000195   734-794   Complement control module/SCR domain  
  0.000000000000243   1425-1493   Complement control module/SCR domain  
  0.000000000000264   1077-1140   Complement control module/SCR domain  
  0.000000000000292   2680-2748   Complement control module/SCR domain  
  0.000000000000351   1252-1315   Complement control module/SCR domain  
  0.000000000000445   388-450   Complement control module/SCR domain  
  0.00000000000189   2119-2184   Complement control module/SCR domain  
  0.00000000000264   1602-1665   Complement control module/SCR domain  
  0.00000000000473   559-627   Complement control module/SCR domain  
  0.00000000000625   3161-3220   Complement control module/SCR domain  
  0.00000000000778   2428-2493   Complement control module/SCR domain  
  0.00000000000998   907-969   Complement control module/SCR domain  
ENSECAP00000022159   0.00000000000714   624-693   Complement control module/SCR domain  
ENSECAP00000022357   0.0000000000973   1522-1596   Complement control module/SCR domain  
  0.0000167   1588-1645   Complement control module/SCR domain  
  0.0000278   1467-1528   Complement control module/SCR domain  
  0.00199   1401-1465   Complement control module/SCR domain  
ENSECAP00000022452   1.1e-19   2404-2472   Complement control module/SCR domain  
  1.27e-18   2461-2530   Complement control module/SCR domain  
  3.34e-18   2644-2712   Complement control module/SCR domain  
  2.36e-17   2519-2592   Complement control module/SCR domain  
  2.92e-16   2701-2771   Complement control module/SCR domain  
  3.91e-16   2762-2826   Complement control module/SCR domain  
  0.00000000000000148   2820-2889   Complement control module/SCR domain  
  0.00000000000000222   2878-2935   Complement control module/SCR domain  
  0.00000000000000264   2218-2285   Complement control module/SCR domain  
  0.00000000000000347   1115-1179   Complement control module/SCR domain  
  0.00000000000000625   2941-3008   Complement control module/SCR domain  
  0.0000000000000133   252-313   Complement control module/SCR domain  
  0.0000000000000306   2576-2638   Complement control module/SCR domain  
  0.0000000000000514   940-1010   Complement control module/SCR domain  
  0.0000000000000598   72-145   Complement control module/SCR domain  
  0.0000000000000612   2346-2408   Complement control module/SCR domain  
  0.0000000000000931   1289-1352   Complement control module/SCR domain  
  0.000000000000103   2156-2229   Complement control module/SCR domain  
  0.000000000000113   597-658   Complement control module/SCR domain  
  0.000000000000139   422-490   Complement control module/SCR domain  
  0.000000000000153   1465-1528   Complement control module/SCR domain  
  0.000000000000334   1811-1880   Complement control module/SCR domain  
  0.00000000000181   1639-1703   Complement control module/SCR domain  
  0.00000000000526   770-830   Complement control module/SCR domain  
  0.0000000000103   1982-2046   Complement control module/SCR domain  
  0.0000000000445   2298-2356   Complement control module/SCR domain  
  0.0000000000486   2999-3056   Complement control module/SCR domain  
ENSECAP00000022632   0.000000000598   742-801   Complement control module/SCR domain  
ENSECAP00000022647   0.00000000000000111   722-779   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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