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  Home > Genomes > Papio anubis 76 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Papio anubis 76

Assignment details

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Papio anubis 76 has 302 significant domains in 59 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000000866   3.14e-20   506-571   Complement control module/SCR domain  
  0.000000000000877   207-264   Complement control module/SCR domain  
  0.00000000000222   449-508   Complement control module/SCR domain  
  0.0000000000729   266-322   Complement control module/SCR domain  
  0.000000000139   387-442   Complement control module/SCR domain  
  0.00000000144   146-202   Complement control module/SCR domain  
  0.0000000315   85-142   Complement control module/SCR domain  
  0.00000364   41-90   Complement control module/SCR domain  
  0.00124   329-381   Complement control module/SCR domain  
ENSPANP00000001032   0.0000000000000195   265-323   Complement control module/SCR domain  
  0.0000000000000222   118-179   Complement control module/SCR domain  
  0.000000000681   81-133   Complement control module/SCR domain  
ENSPANP00000001070   0.000000000000117   177-236   Complement control module/SCR domain  
  0.000000000243   240-301   Complement control module/SCR domain  
  0.00000000459   53-109   Complement control module/SCR domain  
  0.0000000129   114-175   Complement control module/SCR domain  
ENSPANP00000002642   0.000000000122   3222-3280   Complement control module/SCR domain  
ENSPANP00000002841   0.0000000946   139-197   Complement control module/SCR domain  
ENSPANP00000003595   0.00000000000000111   153-225   Complement control module/SCR domain  
  0.000000000000008   92-163   Complement control module/SCR domain  
  0.000000000000162   212-275   Complement control module/SCR domain  
  0.0000000000027   409-469   Complement control module/SCR domain  
  0.0000000000144   32-98   Complement control module/SCR domain  
  0.000000000223   365-419   Complement control module/SCR domain  
  0.00000000301   300-352   Complement control module/SCR domain  
ENSPANP00000004354   0.000000000373   50-112   Complement control module/SCR domain  
ENSPANP00000004497   1.48e-19   2165-2233   Complement control module/SCR domain  
  1.04e-18   2222-2291   Complement control module/SCR domain  
  1.28e-17   2405-2473   Complement control module/SCR domain  
  4.18e-17   2584-2653   Complement control module/SCR domain  
  5e-16   2462-2532   Complement control module/SCR domain  
  6.12e-16   2280-2350   Complement control module/SCR domain  
  6.61e-16   2521-2580   Complement control module/SCR domain  
  0.0000000000000031   2704-2772   Complement control module/SCR domain  
  0.000000000000005   1979-2047   Complement control module/SCR domain  
  0.0000000000000111   872-932   Complement control module/SCR domain  
  0.0000000000000153   2642-2699   Complement control module/SCR domain  
  0.000000000000025   179-247   Complement control module/SCR domain  
  0.000000000000025   697-767   Complement control module/SCR domain  
  0.000000000000032   9-70   Complement control module/SCR domain  
  0.0000000000000473   2337-2399   Complement control module/SCR domain  
  0.0000000000000584   2107-2169   Complement control module/SCR domain  
  0.0000000000000973   1048-1112   Complement control module/SCR domain  
  0.000000000000117   1917-1990   Complement control module/SCR domain  
  0.000000000000118   354-414   Complement control module/SCR domain  
  0.000000000000153   1574-1643   Complement control module/SCR domain  
  0.000000000000181   1228-1291   Complement control module/SCR domain  
  0.00000000000162   1402-1466   Complement control module/SCR domain  
  0.00000000000418   527-587   Complement control module/SCR domain  
  0.0000000000103   1745-1806   Complement control module/SCR domain  
  0.0000000000445   2763-2820   Complement control module/SCR domain  
  0.00000000167   2061-2117   Complement control module/SCR domain  
ENSPANP00000004522   2.22e-18   2468-2536   Complement control module/SCR domain  
  4.59e-17   2525-2592   Complement control module/SCR domain  
  5.42e-17   2409-2478   Complement control module/SCR domain  
  0.0000000000000082   1876-1944   Complement control module/SCR domain  
  0.0000000000000189   178-239   Complement control module/SCR domain  
  0.0000000000000283   1703-1765   Complement control module/SCR domain  
  0.00000000000005   2283-2350   Complement control module/SCR domain  
  0.000000000000148   1004-1067   Complement control module/SCR domain  
  0.000000000000148   1352-1419   Complement control module/SCR domain  
  0.000000000000148   2220-2287   Complement control module/SCR domain  
  0.000000000000167   661-721   Complement control module/SCR domain  
  0.000000000000195   1179-1242   Complement control module/SCR domain  
  0.00000000000162   2577-2644   Complement control module/SCR domain  
  0.00000000000216   2046-2110   Complement control module/SCR domain  
  0.0000000000032   1529-1592   Complement control module/SCR domain  
  0.00000000000347   486-554   Complement control module/SCR domain  
  0.00000000000742   834-896   Complement control module/SCR domain  
  0.0000000000121   2355-2420   Complement control module/SCR domain  
ENSPANP00000004686   0.0000000000556   1540-1598   Complement control module/SCR domain  
ENSPANP00000005863   0.00000000000000126   262-328   Complement control module/SCR domain  
  0.00000000000000334   565-630   Complement control module/SCR domain  
  0.00000000000000347   317-383   Complement control module/SCR domain  
  0.00000000000000361   200-267   Complement control module/SCR domain  
  0.00000000000000445   503-569   Complement control module/SCR domain  
  0.0000000000000139   441-507   Complement control module/SCR domain  
  0.0000000000000153   378-445   Complement control module/SCR domain  
  0.0000000000000584   642-707   Complement control module/SCR domain  
  0.000000000000208   697-762   Complement control module/SCR domain  
ENSPANP00000006258   0.0000000000000057   116-178   Complement control module/SCR domain  
  0.0000000000000292   263-323   Complement control module/SCR domain  
  0.0000000306   78-126   Complement control module/SCR domain  
ENSPANP00000006626   0.000000000000113   280-350   Complement control module/SCR domain  
ENSPANP00000006679   0.0000000000000416   359-429   Complement control module/SCR domain  
  0.0000000000153   305-362   Complement control module/SCR domain  
ENSPANP00000006883   1.53e-19   561-633   Complement control module/SCR domain  
  2.22e-17   169-237   Complement control module/SCR domain  
  2.22e-17   108-180   Complement control module/SCR domain  
  8.76e-16   622-690   Complement control module/SCR domain  
  0.00000000000000162   953-1018   Complement control module/SCR domain  
  0.00000000000000283   755-817   Complement control module/SCR domain  
  0.00000000000000364   302-364   Complement control module/SCR domain  
  0.00000000000000431   877-946   Complement control module/SCR domain  
  0.0000000000000139   424-493   Complement control module/SCR domain  
  0.0000000000000723   244-307   Complement control module/SCR domain  
  0.000000000000167   695-758   Complement control module/SCR domain  
  0.000000000000391   1009-1071   Complement control module/SCR domain  
  0.000000000000403   367-435   Complement control module/SCR domain  
  0.00000000000222   821-888   Complement control module/SCR domain  
  0.000000000378   47-112   Complement control module/SCR domain  
  0.00000000836   501-567   Complement control module/SCR domain  
ENSPANP00000006978   6.29e-19   1537-1601   Complement control module/SCR domain  
  0.0000000000000113   144-217   Complement control module/SCR domain  
  0.0000000000000723   1108-1171   Complement control module/SCR domain  
  0.000000000000229   1294-1357   Complement control module/SCR domain  
  0.000000000000459   867-927   Complement control module/SCR domain  
  0.00000000000113   1479-1539   Complement control module/SCR domain  
  0.00000000000183   627-684   Complement control module/SCR domain  
  0.0000000000021   1041-1103   Complement control module/SCR domain  
  0.00000000000337   85-146   Complement control module/SCR domain  
  0.00000000000367   924-985   Complement control module/SCR domain  
  0.00000000000378   689-744   Complement control module/SCR domain  
  0.00000000000786   982-1044   Complement control module/SCR domain  
  0.000000000498   809-864   Complement control module/SCR domain  
  0.00000000131   508-572   Complement control module/SCR domain  
  0.00000000328   262-325   Complement control module/SCR domain  
  0.00000000537   393-450   Complement control module/SCR domain  
  0.00000000708   561-624   Complement control module/SCR domain  
  0.0000000128   209-270   Complement control module/SCR domain  
  0.0000000183   1417-1473   Complement control module/SCR domain  
  0.0000000315   455-512   Complement control module/SCR domain  
  0.0000000668   1230-1288   Complement control module/SCR domain  
  0.000000183   26-88   Complement control module/SCR domain  
  0.000354   1167-1227   Complement control module/SCR domain  
  0.000367   1352-1412   Complement control module/SCR domain  
  0.00148   324-384   Complement control module/SCR domain  
  0.00297   751-803   Complement control module/SCR domain  
ENSPANP00000007596   3.1e-21   1857-1928   Complement control module/SCR domain  
  4.72e-19   1502-1570   Complement control module/SCR domain  
  1.95e-18   1559-1627   Complement control module/SCR domain  
  2.56e-18   1617-1690   Complement control module/SCR domain  
  6.53e-18   1798-1868   Complement control module/SCR domain  
  1.14e-17   1741-1809   Complement control module/SCR domain  
  2.97e-17   1917-1986   Complement control module/SCR domain  
  6.53e-17   1443-1512   Complement control module/SCR domain  
  0.00000000000000116   909-978   Complement control module/SCR domain  
  0.00000000000000128   1316-1383   Complement control module/SCR domain  
  0.00000000000000153   1976-2032   Complement control module/SCR domain  
  0.00000000000000208   2037-2105   Complement control module/SCR domain  
  0.00000000000000292   1673-1734   Complement control module/SCR domain  
  0.0000000000000111   1254-1327   Complement control module/SCR domain  
  0.0000000000000243   737-799   Complement control module/SCR domain  
  0.000000000000027   213-277   Complement control module/SCR domain  
  0.000000000000082   386-451   Complement control module/SCR domain  
  0.000000000000131   563-629   Complement control module/SCR domain  
  0.00000000000082   39-101   Complement control module/SCR domain  
  0.0000000000012   2096-2154   Complement control module/SCR domain  
  0.00000000000229   1388-1450   Complement control module/SCR domain  
  0.0000000000418   1080-1143   Complement control module/SCR domain  
ENSPANP00000008129   0.00000000000000528   265-331   Complement control module/SCR domain  
  0.00000000000334   210-275   Complement control module/SCR domain  
ENSPANP00000008216   0.00000000000000783   356-421   Complement control module/SCR domain  
  0.000000000000375   415-477   Complement control module/SCR domain  
  0.000000000000642   483-542   Complement control module/SCR domain  
  0.0000000000181   3-64   Complement control module/SCR domain  
  0.000000000499   178-242   Complement control module/SCR domain  
ENSPANP00000008669   5.8e-16   113-185   Complement control module/SCR domain  
  0.00000000000000113   174-237   Complement control module/SCR domain  
  0.000000000000128   425-487   Complement control module/SCR domain  
  0.000000000000292   235-299   Complement control module/SCR domain  
  0.000000000000862   482-540   Complement control module/SCR domain  
  0.000000000229   50-117   Complement control module/SCR domain  
  0.00000000256   299-368   Complement control module/SCR domain  
  0.00000236   386-428   Complement control module/SCR domain  
ENSPANP00000008857   0.0000000000000132   300-370   Complement control module/SCR domain  
ENSPANP00000009778   1.04e-17   162-234   Complement control module/SCR domain  
  3.51e-16   223-284   Complement control module/SCR domain  
  0.0000000000031   36-102   Complement control module/SCR domain  
  0.0000000000135   97-172   Complement control module/SCR domain  
ENSPANP00000009779   1.15e-16   98-171   Complement control module/SCR domain  
  5.42e-16   223-287   Complement control module/SCR domain  
  0.000000000000639   155-225   Complement control module/SCR domain  
  0.00000000863   35-88   Complement control module/SCR domain  
ENSPANP00000010016   3.14e-20   506-571   Complement control module/SCR domain  
  0.000000000000877   207-264   Complement control module/SCR domain  
  0.00000000000222   449-508   Complement control module/SCR domain  
  0.0000000000729   266-322   Complement control module/SCR domain  
  0.000000000139   387-442   Complement control module/SCR domain  
  0.00000000144   146-202   Complement control module/SCR domain  
  0.0000000315   85-142   Complement control module/SCR domain  
  0.00000364   41-90   Complement control module/SCR domain  
  0.00124   329-381   Complement control module/SCR domain  
ENSPANP00000010118   2.29e-21   445-524   Complement control module/SCR domain  
  0.000000000000118   202-258   Complement control module/SCR domain  
  0.0000000000032   143-197   Complement control module/SCR domain  
  0.00000000000341   79-137   Complement control module/SCR domain  
  0.00000000000459   326-383   Complement control module/SCR domain  
  0.0000000000144   386-442   Complement control module/SCR domain  
  0.0000000354   17-76   Complement control module/SCR domain  
ENSPANP00000010166   4.06e-18   514-576   Complement control module/SCR domain  
  0.0000000000000301   210-274   Complement control module/SCR domain  
  0.000000000000564   457-515   Complement control module/SCR domain  
  0.000000000971   341-398   Complement control module/SCR domain  
  0.0000000012   94-151   Complement control module/SCR domain  
  0.000000375   394-451   Complement control module/SCR domain  
  0.000000459   147-204   Complement control module/SCR domain  
  0.000082   22-87   Complement control module/SCR domain  
  0.000486   269-334   Complement control module/SCR domain  
ENSPANP00000010186   0.00000000000612   570-636   Complement control module/SCR domain  
  0.0000000111   626-682   Complement control module/SCR domain  
ENSPANP00000010768   0.000000000000278   1213-1273   Complement control module/SCR domain  
ENSPANP00000010953   0.000000000195   812-871   Complement control module/SCR domain  
ENSPANP00000010962   0.00000000000806   696-765   Complement control module/SCR domain  
ENSPANP00000011325   1.57e-16   131-193   Complement control module/SCR domain  
  0.000000000000114   80-142   Complement control module/SCR domain  
  0.0000000000983   22-87   Complement control module/SCR domain  
ENSPANP00000011618   0.0000000000715   644-707   Complement control module/SCR domain  
  0.0000000594   699-755   Complement control module/SCR domain  
ENSPANP00000011736   0.00000000000000264   243-308   Complement control module/SCR domain  
  0.0000000000000104   369-442   Complement control module/SCR domain  
  0.0000000000000138   181-246   Complement control module/SCR domain  
  0.0000000000000278   298-364   Complement control module/SCR domain  
  0.0000000000000514   431-500   Complement control module/SCR domain  
  0.000000000000612   491-552   Complement control module/SCR domain  
ENSPANP00000012036   0.00000000000000612   285-355   Complement control module/SCR domain  
  0.0000000000000278   219-288   Complement control module/SCR domain  
ENSPANP00000012271   0.00000000000806   696-765   Complement control module/SCR domain  
ENSPANP00000012346   0.0000000000000806   84-144   Complement control module/SCR domain  
  0.00000000000153   150-206   Complement control module/SCR domain  
  0.0000153   24-92   Complement control module/SCR domain  
ENSPANP00000012347   0.0000000000000445   97-158   Complement control module/SCR domain  
  0.000000000000612   164-220   Complement control module/SCR domain  
  0.00000306   44-84   Complement control module/SCR domain  
ENSPANP00000012790   0.000000000459   723-779   Complement control module/SCR domain  
ENSPANP00000013892   0.00000000195   103-159   Complement control module/SCR domain  
  0.00000361   56-103   Complement control module/SCR domain  
ENSPANP00000014207   0.00000000000000959   289-351   Complement control module/SCR domain  
  0.000000000000148   643-701   Complement control module/SCR domain  
  0.000000000000236   703-764   Complement control module/SCR domain  
  0.00000000000445   771-829   Complement control module/SCR domain  
  0.0000000526   464-529   Complement control module/SCR domain  
ENSPANP00000014410   0.00000000000639   2161-2221   Complement control module/SCR domain  
ENSPANP00000014866   2.64e-16   79-148   Complement control module/SCR domain  
ENSPANP00000014934   0.00000000000514   308-379   Complement control module/SCR domain  
  0.0292   375-412   Complement control module/SCR domain  
ENSPANP00000015805   0.0000000000139   307-372   Complement control module/SCR domain  
ENSPANP00000016445   5.98e-17   722-779   Complement control module/SCR domain  
ENSPANP00000016446   6.12e-17   748-805   Complement control module/SCR domain  
ENSPANP00000016499   9.61e-21   264-345   Complement control module/SCR domain  
  1.62e-16   83-149   Complement control module/SCR domain  
  0.000000000000124   205-267   Complement control module/SCR domain  
  0.00000000000089   140-214   Complement control module/SCR domain  
  0.000000000054   22-93   Complement control module/SCR domain  
ENSPANP00000017169   0.000000000189   41-102   Complement control module/SCR domain  
ENSPANP00000017817   0.000000000000264   1212-1272   Complement control module/SCR domain  
ENSPANP00000017951   0.0000000000208   458-529   Complement control module/SCR domain  
  0.0000000000876   404-461   Complement control module/SCR domain  
ENSPANP00000017959   2.5e-19   491-560   Complement control module/SCR domain  
  2.5e-16   683-745   Complement control module/SCR domain  
  4.45e-16   375-438   Complement control module/SCR domain  
  0.000000000000001   140-211   Complement control module/SCR domain  
  0.00000000000000122   315-385   Complement control module/SCR domain  
  0.00000000000000236   817-881   Complement control module/SCR domain  
  0.0000000000000124   566-631   Complement control module/SCR domain  
  0.0000000000000903   2-64   Complement control module/SCR domain  
  0.000000000000292   871-935   Complement control module/SCR domain  
  0.00000000000514   752-811   Complement control module/SCR domain  
  0.0000000000124   69-132   Complement control module/SCR domain  
  0.000000000089   196-259   Complement control module/SCR domain  
  0.0000000514   647-694   Complement control module/SCR domain  
  0.00000032   453-502   Complement control module/SCR domain  
  0.0000306   280-309   Complement control module/SCR domain  
ENSPANP00000018943   0.000000000208   1203-1266   Complement control module/SCR domain  
  0.00000000431   1139-1211   Complement control module/SCR domain  
  0.00000000987   1077-1143   Complement control module/SCR domain  
  0.00000222   1008-1081   Complement control module/SCR domain  
ENSPANP00000018983   0.000000000000082   180-250   Complement control module/SCR domain  
  0.000000000113   240-300   Complement control module/SCR domain  
ENSPANP00000018995   2.5e-19   1347-1416   Complement control module/SCR domain  
  3.61e-18   2034-2103   Complement control module/SCR domain  
  6.12e-18   2442-2511   Complement control module/SCR domain  
  7.64e-18   1164-1232   Complement control module/SCR domain  
  1.35e-17   1976-2045   Complement control module/SCR domain  
  1.38e-17   990-1059   Complement control module/SCR domain  
  1.67e-17   1582-1652   Complement control module/SCR domain  
  3.47e-17   1048-1117   Complement control module/SCR domain  
  1.21e-16   891-949   Complement control module/SCR domain  
  2.08e-16   2092-2161   Complement control module/SCR domain  
  2.08e-16   1467-1531   Complement control module/SCR domain  
  2.22e-16   1874-1929   Complement control module/SCR domain  
  2.36e-16   1757-1824   Complement control module/SCR domain  
  6.95e-16   1641-1710   Complement control module/SCR domain  
  9.17e-16   1699-1762   Complement control module/SCR domain  
  0.00000000000000139   2619-2678   Complement control module/SCR domain  
  0.00000000000000181   1106-1170   Complement control module/SCR domain  
  0.00000000000000264   1918-1980   Complement control module/SCR domain  
  0.00000000000000375   2501-2567   Complement control module/SCR domain  
  0.00000000000000459   2151-2213   Complement control module/SCR domain  
  0.0000000000000107   1405-1476   Complement control module/SCR domain  
  0.0000000000000862   2267-2328   Complement control module/SCR domain  
  0.000000000000792   1525-1593   Complement control module/SCR domain  
  0.00000000000195   2210-2276   Complement control module/SCR domain  
  0.00000000000222   831-898   Complement control module/SCR domain  
  0.00000000000334   1221-1289   Complement control module/SCR domain  
  0.00000000000625   2324-2391   Complement control module/SCR domain  
  0.00000000000653   2560-2628   Complement control module/SCR domain  
  0.000000000153   2384-2447   Complement control module/SCR domain  
  0.000000000264   1286-1353   Complement control module/SCR domain  
ENSPANP00000019418   0.000000000167   31-93   Complement control module/SCR domain  
ENSPANP00000019850   0.00000000000142   28-92   Complement control module/SCR domain  
ENSPANP00000019852   0.0000000000121   124-184   Complement control module/SCR domain  
  0.00000000347   23-82   Complement control module/SCR domain  
ENSPANP00000019853   0.0000000000123   124-184   Complement control module/SCR domain  
  0.00000000347   23-82   Complement control module/SCR domain  
ENSPANP00000019885   0.00000000000000256   698-763   Complement control module/SCR domain  
  0.00000000000117   757-819   Complement control module/SCR domain  
  0.00000000000445   344-409   Complement control module/SCR domain  
  0.000000000017   824-884   Complement control module/SCR domain  
  0.000000000222   520-584   Complement control module/SCR domain  
 
Weak hits:
ENSPANP00000002366   0.0293   217-263   Complement control module/SCR domain  
ENSPANP00000002549   0.027   190-236   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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