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  Home > Genomes > Danio rerio 69_9 > POZ domain domains


POZ domain superfamily domain assignments
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Danio rerio 69_9

Assignment details

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Danio rerio 69_9 has 241 significant domains in 229 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDARP00000002411   1.41e-20   68-178   BTB/POZ domain  
ENSDARP00000002476   2.98e-27   5-128   BTB/POZ domain  
ENSDARP00000007629   8.9e-27   32-129   Tetramerization domain of potassium channels  
ENSDARP00000009601   1.08e-28   39-137   Tetramerization domain of potassium channels  
ENSDARP00000009683   1.59e-25   8-122   BTB/POZ domain  
ENSDARP00000010440   2.94e-16   120-224   Tetramerization domain of potassium channels  
ENSDARP00000011409   3.3e-33   28-145   BTB/POZ domain  
ENSDARP00000011986   3.4e-27   32-129   Tetramerization domain of potassium channels  
ENSDARP00000012238   4.4e-31   16-129   BTB/POZ domain  
ENSDARP00000012365   8.63e-26   38-158   BTB/POZ domain  
ENSDARP00000012991   1.54e-32   18-128   BTB/POZ domain  
ENSDARP00000013267   2.43e-32   181-295   BTB/POZ domain  
ENSDARP00000013865   1.31e-16   125-225   BTB/POZ domain  
  0.00000000298   285-355,383-408   BTB/POZ domain  
ENSDARP00000014696   0.00000000000000136   9-96   BTB/POZ domain  
ENSDARP00000015726   3.88e-28   8-126   BTB/POZ domain  
ENSDARP00000015783   0.00000000000033   9-101   BTB/POZ domain  
ENSDARP00000015887   1.23e-25   2-70   BTB/POZ domain  
ENSDARP00000016471   3.34e-25   6-114   BTB/POZ domain  
ENSDARP00000016895   3.92e-29   10-123   BTB/POZ domain  
ENSDARP00000016945   5.97e-27   9-116   BTB/POZ domain  
ENSDARP00000021226   4.71e-25   3-112   BTB/POZ domain  
ENSDARP00000022485   1.2e-34   46-161   BTB/POZ domain  
ENSDARP00000023216   1.88e-29   15-123   Tetramerization domain of potassium channels  
ENSDARP00000023457   2.94e-34   20-137   BTB/POZ domain  
ENSDARP00000024683   3.66e-27   17-135   BTB/POZ domain  
ENSDARP00000025618   2.16e-30   61-175   BTB/POZ domain  
ENSDARP00000025832   4.51e-31   33-136   Tetramerization domain of potassium channels  
ENSDARP00000026694   1.02e-26   6-122   BTB/POZ domain  
ENSDARP00000027207   1.26e-29   10-131   BTB/POZ domain  
ENSDARP00000027995   1.12e-29   90-188   Tetramerization domain of potassium channels  
ENSDARP00000028479   5.89e-23   2-102   BTB/POZ domain  
ENSDARP00000028545   1.81e-29   16-125   Tetramerization domain of potassium channels  
ENSDARP00000028820   3.14e-33   42-160   BTB/POZ domain  
ENSDARP00000030003   1.59e-27   286-411   BTB/POZ domain  
ENSDARP00000033638   4.51e-31   77-179   Tetramerization domain of potassium channels  
ENSDARP00000034172   2.16e-32   13-106   Tetramerization domain of potassium channels  
ENSDARP00000034538   3.92e-24   21-132   Tetramerization domain of potassium channels  
ENSDARP00000036016   8.48e-30   37-158   BTB/POZ domain  
ENSDARP00000036033   3.92e-27   22-129   Tetramerization domain of potassium channels  
ENSDARP00000038002   2.43e-32   6-120   BTB/POZ domain  
ENSDARP00000039584   2.16e-33   22-140   BTB/POZ domain  
ENSDARP00000039906   9.42e-28   55-179   BTB/POZ domain  
ENSDARP00000042672   1.28e-32   40-144   Tetramerization domain of potassium channels  
ENSDARP00000043396   2.12e-20   9-126   BTB/POZ domain  
ENSDARP00000043814   4.71e-36   8-124   BTB/POZ domain  
ENSDARP00000044936   1.91e-29   15-124   Tetramerization domain of potassium channels  
ENSDARP00000045413   0.0000000000602   36-136   Tetramerization domain of potassium channels  
ENSDARP00000045762   3.69e-33   31-154   BTB/POZ domain  
ENSDARP00000047540   3.87e-31   11-129   BTB/POZ domain  
ENSDARP00000052064   1.62e-25   88-196   Tetramerization domain of potassium channels  
ENSDARP00000052077   1.05e-32   11-129   BTB/POZ domain  
ENSDARP00000052636   4.12e-25   3-131   BTB/POZ domain  
ENSDARP00000053221   8.16e-26   355-465   BTB/POZ domain  
ENSDARP00000055087   0.0000000275   150-253   BTB/POZ domain  
ENSDARP00000055280   1.65e-32   36-140   Tetramerization domain of potassium channels  
ENSDARP00000056134   5.49e-28   2-119   BTB/POZ domain  
ENSDARP00000056665   3.14e-36   28-145   BTB/POZ domain  
ENSDARP00000057021   1.23e-33   19-129   BTB/POZ domain  
ENSDARP00000057048   7.85e-25   51-166   BTB/POZ domain  
ENSDARP00000057356   3.81e-34   17-133   BTB/POZ domain  
ENSDARP00000057363   0.00000000000000502   8-115   BTB/POZ domain  
ENSDARP00000058940   4.26e-31   23-141   BTB/POZ domain  
ENSDARP00000060934   1.52e-24   39-135   BTB/POZ domain  
ENSDARP00000061658   1.29e-29   9-127   BTB/POZ domain  
ENSDARP00000062147   3.01e-23   3-96   BTB/POZ domain  
ENSDARP00000062628   6.87e-31   9-122   BTB/POZ domain  
ENSDARP00000063273   1.49e-32   13-105   Tetramerization domain of potassium channels  
ENSDARP00000063540   4.32e-25   44-155   BTB/POZ domain  
ENSDARP00000064654   2.07e-22   3-101   BTB/POZ domain  
ENSDARP00000065806   8.64e-24   40-136   Tetramerization domain of potassium channels  
ENSDARP00000066367   9.42e-24   65-194   BTB/POZ domain  
ENSDARP00000066586   2.83e-26   17-71,107-169   BTB/POZ domain  
ENSDARP00000066699   7.85e-38   19-113   BTB/POZ domain  
ENSDARP00000067137   1.73e-27   2-118   BTB/POZ domain  
ENSDARP00000067578   6.06e-28   6-117   BTB/POZ domain  
ENSDARP00000067599   6.67e-29   9-123   BTB/POZ domain  
ENSDARP00000067647   3.14e-26   31-126   Tetramerization domain of potassium channels  
ENSDARP00000068090   1.44e-27   61-166   Tetramerization domain of potassium channels  
ENSDARP00000068409   8.37e-32   8-112   Tetramerization domain of potassium channels  
ENSDARP00000069251   3.05e-26   18-134   BTB/POZ domain  
ENSDARP00000070066   9.22e-30   14-115   Tetramerization domain of potassium channels  
ENSDARP00000070382   4.24e-19   70-184   BTB/POZ domain  
ENSDARP00000070477   7.22e-37   30-148   BTB/POZ domain  
ENSDARP00000072319   4.32e-27   5-125   BTB/POZ domain  
ENSDARP00000072406   9.03e-28   435-553   BTB/POZ domain  
  0.000000000000335   299-416   BTB/POZ domain  
ENSDARP00000072711   5.49e-32   36-140   Tetramerization domain of potassium channels  
ENSDARP00000072938   2.36e-30   21-122   Tetramerization domain of potassium channels  
ENSDARP00000073466   9.42e-28   16-115   Tetramerization domain of potassium channels  
ENSDARP00000073620   3.14e-31   50-157   BTB/POZ domain  
ENSDARP00000073800   3.92e-24   8-123   BTB/POZ domain  
ENSDARP00000074112   1.16e-31   8-126   BTB/POZ domain  
ENSDARP00000074944   1.52e-21   22-138   BTB/POZ domain  
ENSDARP00000075383   4.71e-34   48-159   BTB/POZ domain  
ENSDARP00000075626   5.49e-32   23-142   BTB/POZ domain  
ENSDARP00000076252   1.06e-25   14-129   BTB/POZ domain  
ENSDARP00000076788   3.65e-16   4-88   BTB/POZ domain  
ENSDARP00000076925   6.67e-19   36-138   Tetramerization domain of potassium channels  
ENSDARP00000077824   4.45e-19   825-933   BTB/POZ domain  
ENSDARP00000078348   2.88e-27   93-189   Tetramerization domain of potassium channels  
ENSDARP00000078796   2.17e-31   32-140   Tetramerization domain of potassium channels  
ENSDARP00000079774   4.66e-28   13-129   BTB/POZ domain  
ENSDARP00000080348   1.06e-26   175-299   BTB/POZ domain  
ENSDARP00000080352   1.92e-27   149-273   BTB/POZ domain  
ENSDARP00000080599   5.1e-27   14-109   Tetramerization domain of potassium channels  
ENSDARP00000080965   7.46e-28   6-102   Tetramerization domain of potassium channels  
ENSDARP00000080972   4.32e-19   51-162   BTB/POZ domain  
ENSDARP00000081229   1.1e-31   7-134   BTB/POZ domain  
ENSDARP00000081727   4.19e-31   36-144   Tetramerization domain of potassium channels  
ENSDARP00000082010   1.88e-16   537-656   BTB/POZ domain  
ENSDARP00000082439   6.28e-25   7-110   Tetramerization domain of potassium channels  
ENSDARP00000082910   1.67e-25   90-187   Tetramerization domain of potassium channels  
ENSDARP00000082978   1.73e-33   33-148   BTB/POZ domain  
ENSDARP00000083448   7.32e-32   58-174   BTB/POZ domain  
ENSDARP00000083483   6.06e-37   19-136   BTB/POZ domain  
ENSDARP00000083546   5.89e-20   841-951   BTB/POZ domain  
ENSDARP00000083875   2.51e-31   210-329   BTB/POZ domain  
ENSDARP00000085300   6.87e-18   159-261   Tetramerization domain of potassium channels  
ENSDARP00000085905   3.14e-27   82-194   Tetramerization domain of potassium channels  
ENSDARP00000085980   5.23e-26   34-130   Tetramerization domain of potassium channels  
ENSDARP00000086043   4.45e-28   62-173   Tetramerization domain of potassium channels  
ENSDARP00000086175   5.97e-22   822-929   BTB/POZ domain  
ENSDARP00000086682   7.07e-24   827-934   BTB/POZ domain  
ENSDARP00000086753   6.02e-27   33-130   Tetramerization domain of potassium channels  
ENSDARP00000087460   2.83e-36   21-136   BTB/POZ domain  
ENSDARP00000087528   2.69e-25   21-112   Tetramerization domain of potassium channels  
ENSDARP00000088726   2.15e-25   204-313   BTB/POZ domain  
  0.0000000000557   71-182   BTB/POZ domain  
ENSDARP00000088904   9.81e-35   45-160   BTB/POZ domain  
ENSDARP00000089035   4.12e-27   89-190   Tetramerization domain of potassium channels  
ENSDARP00000089682   2.75e-27   11-120   BTB/POZ domain  
ENSDARP00000090220   6.67e-28   32-135   Tetramerization domain of potassium channels  
ENSDARP00000090560   4.49e-29   16-130   BTB/POZ domain  
ENSDARP00000090707   3.66e-32   8-112   Tetramerization domain of potassium channels  
ENSDARP00000091441   4.19e-31   24-144   BTB/POZ domain  
ENSDARP00000091581   1.26e-24   7-131   BTB/POZ domain  
ENSDARP00000092118   7.59e-28   72-183   Tetramerization domain of potassium channels  
ENSDARP00000092237   2.35e-27   12-129   BTB/POZ domain  
ENSDARP00000092605   0.00000000526   148-251   BTB/POZ domain  
ENSDARP00000092831   3.26e-35   4-119   BTB/POZ domain  
ENSDARP00000093366   3.14e-29   57-164   Tetramerization domain of potassium channels  
ENSDARP00000094186   2.94e-32   2-121   BTB/POZ domain  
ENSDARP00000094404   9.81e-28   97-222   BTB/POZ domain  
ENSDARP00000094423   2.88e-27   71-178   Tetramerization domain of potassium channels  
ENSDARP00000094847   2.35e-32   29-144   BTB/POZ domain  
ENSDARP00000096464   5.89e-25   7-115   BTB/POZ domain  
ENSDARP00000097504   5.23e-27   33-130   Tetramerization domain of potassium channels  
ENSDARP00000097547   1.94e-28   136-253   BTB/POZ domain  
ENSDARP00000097807   6.28e-27   147-259   BTB/POZ domain  
  0.0000000385   26-108   BTB/POZ domain  
ENSDARP00000097860   1.39e-21   6-115   BTB/POZ domain  
ENSDARP00000098262   6.8e-25   46-140   Tetramerization domain of potassium channels  
ENSDARP00000098413   4.04e-32   39-143   Tetramerization domain of potassium channels  
ENSDARP00000098929   2.32e-24   103-204   BTB/POZ domain  
  4.71e-24   268-372   BTB/POZ domain  
ENSDARP00000099083   9.81e-28   2-115   BTB/POZ domain  
ENSDARP00000099374   6.08e-32   13-131   BTB/POZ domain  
ENSDARP00000099482   1.06e-25   17-132   BTB/POZ domain  
ENSDARP00000099912   9.94e-32   8-123   Tetramerization domain of potassium channels  
ENSDARP00000100421   1.26e-30   8-123   BTB/POZ domain  
ENSDARP00000100618   9.03e-30   35-153   BTB/POZ domain  
ENSDARP00000100704   2.9e-29   2-119   BTB/POZ domain  
ENSDARP00000101071   2.94e-34   10-128   BTB/POZ domain  
ENSDARP00000101084   3.61e-28   3-120   BTB/POZ domain  
ENSDARP00000101152   0.0000000243   149-257   BTB/POZ domain  
ENSDARP00000101156   7.85e-16   79-199   BTB/POZ domain  
ENSDARP00000101430   2.88e-21   754-859   BTB/POZ domain  
  0.0000000000000126   541-652   BTB/POZ domain  
ENSDARP00000101599   3.03e-26   189-301   BTB/POZ domain  
ENSDARP00000101698   1.95e-21   2-86   BTB/POZ domain  
ENSDARP00000101810   2.75e-30   8-127   BTB/POZ domain  
ENSDARP00000101978   0.0000000000000157   29-125   BTB/POZ domain  
ENSDARP00000102342   3.45e-24   13-121   BTB/POZ domain  
ENSDARP00000102422   2.47e-31   2-110   BTB/POZ domain  
ENSDARP00000102794   7.85e-30   10-134   BTB/POZ domain  
ENSDARP00000102846   9.94e-27   23-122   Tetramerization domain of potassium channels  
ENSDARP00000103323   1.41e-16   1-78   BTB/POZ domain  
ENSDARP00000103489   2e-19   266-321,405-470   BTB/POZ domain  
  0.0000000534   487-542   BTB/POZ domain  
ENSDARP00000103530   1.83e-26   35-132   Tetramerization domain of potassium channels  
ENSDARP00000103717   8.25e-32   14-145   BTB/POZ domain  
ENSDARP00000103751   0.0000000000000769   46-165   BTB/POZ domain  
ENSDARP00000103804   6.28e-33   181-295   BTB/POZ domain  
ENSDARP00000103939   1.41e-20   488-594   BTB/POZ domain  
  0.00000000000000471   244-298,408-471   BTB/POZ domain  
ENSDARP00000104613   2.04e-29   11-131   BTB/POZ domain  
ENSDARP00000105010   2.83e-22   2-114   BTB/POZ domain  
ENSDARP00000105369   1.1e-31   39-143   Tetramerization domain of potassium channels  
ENSDARP00000105538   7.85e-27   4-108   BTB/POZ domain  
ENSDARP00000105981   1.75e-26   4-120   BTB/POZ domain  
ENSDARP00000106333   3.66e-28   19-119   Tetramerization domain of potassium channels  
ENSDARP00000106554   3.57e-35   16-135   BTB/POZ domain  
ENSDARP00000106659   1.1e-26   67-164   Tetramerization domain of potassium channels  
ENSDARP00000106826   8.79e-20   463-569   BTB/POZ domain  
  2.62e-17   237-292,382-446   BTB/POZ domain  
ENSDARP00000106872   1.31e-33   25-142   BTB/POZ domain  
ENSDARP00000107233   9.42e-18   3-115   BTB/POZ domain  
ENSDARP00000107363   7.33e-32   34-143   Tetramerization domain of potassium channels  
ENSDARP00000107695   1.9e-30   22-141   BTB/POZ domain  
ENSDARP00000107934   9.94e-26   15-134   BTB/POZ domain  
ENSDARP00000108482   2.92e-30   19-121   Tetramerization domain of potassium channels  
ENSDARP00000108528   9.81e-35   154-272   BTB/POZ domain  
ENSDARP00000108618   9.89e-20   473-576   BTB/POZ domain  
  9.62e-17   251-307,395-456   BTB/POZ domain  
ENSDARP00000108621   5.89e-24   357-466   BTB/POZ domain  
ENSDARP00000108668   0.0000000126   11-102   BTB/POZ domain  
ENSDARP00000108731   2.16e-37   25-142   BTB/POZ domain  
ENSDARP00000109076   9.64e-24   5-121   BTB/POZ domain  
ENSDARP00000109213   6.08e-25   2-129   BTB/POZ domain  
ENSDARP00000109228   8.9e-27   33-130   Tetramerization domain of potassium channels  
ENSDARP00000109305   3.14e-28   300-425   BTB/POZ domain  
ENSDARP00000109526   3.41e-26   416-519   BTB/POZ domain  
  0.0000628   244-298   BTB/POZ domain  
ENSDARP00000109601   1.29e-27   109-232   BTB/POZ domain  
ENSDARP00000109842   4.19e-31   43-152   Tetramerization domain of potassium channels  
ENSDARP00000110338   4.19e-16   27-130   Tetramerization domain of potassium channels  
ENSDARP00000110440   2.83e-23   5-123   BTB/POZ domain  
ENSDARP00000110552   7.33e-34   12-127   BTB/POZ domain  
ENSDARP00000110684   0.00000255   4-55   BTB/POZ domain  
ENSDARP00000110922   6.67e-34   183-297   BTB/POZ domain  
ENSDARP00000111157   4.94e-17   3-118   BTB/POZ domain  
ENSDARP00000111170   7.63e-29   24-128   Tetramerization domain of potassium channels  
ENSDARP00000112236   8.16e-33   27-147   BTB/POZ domain  
ENSDARP00000112298   7.26e-31   35-149   BTB/POZ domain  
ENSDARP00000112400   5.76e-27   34-130   Tetramerization domain of potassium channels  
ENSDARP00000114648   1.94e-25   3-112   BTB/POZ domain  
ENSDARP00000115504   1.65e-29   8-123   BTB/POZ domain  
ENSDARP00000115784   6.54e-27   84-196   Tetramerization domain of potassium channels  
ENSDARP00000116571   1.83e-26   101-193   Tetramerization domain of potassium channels  
ENSDARP00000116671   4.71e-33   6-120   BTB/POZ domain  
ENSDARP00000118581   7.53e-38   18-112   BTB/POZ domain  
ENSDARP00000118742   9.03e-34   25-144   BTB/POZ domain  
ENSDARP00000118816   7.06e-28   81-200   BTB/POZ domain  
ENSDARP00000121691   7.26e-22   592-673,708-738   BTB/POZ domain  
  0.00000000000000864   360-409,441-474,514-544   BTB/POZ domain  
ENSDARP00000122151   9.03e-30   92-192   Tetramerization domain of potassium channels  
ENSDARP00000122355   4.32e-30   31-132   Tetramerization domain of potassium channels  
ENSDARP00000122490   4.12e-27   32-126   Tetramerization domain of potassium channels  
ENSDARP00000124136   2.08e-29   26-151   BTB/POZ domain  
ENSDARP00000124369   1.05e-24   53-166   BTB/POZ domain  
 
Weak hits:
ENSDARP00000098507   0.00149   167-272   BTB/POZ domain  
ENSDARP00000105743   0.0033   10-87   BTB/POZ domain  
ENSDARP00000124375   0.022   136-177,222-277   BTB/POZ domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   334690 334690
No Yes Homo sapiens 76_38 Human 609 587
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 192 183
No Yes Gorilla gorilla 76_3.1 Western gorilla 254 244
No Yes Pongo abelii 76_2 Sumatran orangutan 197 186
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 184 173
No Yes Papio anubis 76 Olive baboon 193 185
No Yes Macaca mulatta 76_1 Rhesus monkey 259 246
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 344 328
No Yes Otolemur garnettii 76_3 Small-eared galago 199 189
No Yes Microcebus murinus 76_1 Gray mouse lemur 131 125
No Yes Rattus norvegicus 76_5.0 Norway rat 228 215
No Yes Mus musculus 76_38 House mouse 472 455
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 145 138
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 184 177
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 172 163
No Yes Cavia porcellus 76_3 Domestic guinea pig 201 191
No Yes Oryctolagus cuniculus 76_2 Rabbit 196 184
No Yes Ochotona princeps 76 American pika 143 134
No Yes Tupaia belangeri 76 Northern tree shrew 108 102
No Yes Sus scrofa 76_10.2 Pig 203 194
No Yes Bos taurus 76_3.1 Cattle 205 192
No Yes Ovis aries 76_3.1 Sheep 194 183
No Yes Vicugna pacos 76_1 Alpaca 94 89
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 167 158
No Yes Mustela putorius furo 76_1.0 Domestic ferret 189 180
No Yes Ailuropoda melanoleuca 76_1 Giant panda 193 184
No Yes Canis familiaris 76_3.1 Dog 228 217
No Yes Felis catus 76_6.2 Domestic cat 189 178
No Yes Equus caballus 76_2 Horse 186 174
No Yes Myotis lucifugus 76_2.0 Little brown bat 205 196
No Yes Pteropus vampyrus 76_1 Large flying fox 163 155
No Yes Sorex araneus 76_1 European shrew 104 99
No Yes Erinaceus europaeus 76 Western European hedgehog 118 113
No Yes Procavia capensis 76_1 Cape rock hyrax 137 132
No Yes Loxodonta africana 76_3 African savanna elephant 231 218
No Yes Echinops telfairi 76 Small Madagascar hedgehog 135 128
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 224 212
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 95 91
No Yes Macropus eugenii 76_1.0 Tammar wallaby 140 132
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 188 179
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 205 194
No Yes Ornithorhynchus anatinus 76_5 Platypus 157 150
No Yes Saccoglossus kowalevskii v3.0   194 170
No Yes Petromyzon marinus 76_7.0 Sea lamprey 87 83
No Yes Meleagris gallopavo 76_2 Turkey 164 154
No Yes Gallus gallus 76_4 Chicken 172 165
No Yes Anas platyrhynchos 76_1.0 Mallard 165 158
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 159 153
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 170 163
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 194 182
No Yes Anolis carolinensis 76_2.0 Green anole 184 174
No Yes Xenopus laevis African clawed frog 251 240
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 194 186
No Yes Latimeria chalumnae 76_1 Coelacanth 239 227
No Yes Lepisosteus oculatus 76 Spotted gar 224 209
No Yes Gadus morhua 76_1 Atlantic cod 209 202
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 214 206
No Yes Takifugu rubripes 76_4 Torafugu 492 477
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 274 265
No Yes Oryzias latipes 76_1 Japanese medaka 249 240
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 228 220
No Yes Poecilia formosa 76 Amazon molly 232 223
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 265 255
No Yes Astyanax mexicanus 76 Mexican tetra 233 221
No Yes Danio rerio 76_9 Zebrafish 365 350
No Yes Oikopleura dioica   64 64
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 98 96
No Yes Ciona intestinalis 76 Vase tunicate 108 104
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 156 118
No Yes Adineta vaga   176 171
No Yes Octopus bimaculoides 280   132 127
No Yes Crassostrea gigas 22 Pacific oyster 156 146
No Yes Lottia gigantea Owl limpet 118 114
No Yes Helobdella robusta   92 91
No Yes Capitella sp. I   388 375
No Yes Danaus plexippus OGS1.0 Monarch butterfly 74 70
No Yes Heliconius melpomene Postman butterfly 64 63
No Yes Bombyx mori Domestic silkworm 61 61
No Yes Nasonia vitripennis Jewel wasp 130 127
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 159 151
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 70 67
No Yes Linepithema humile v1.1 Argentine ant 73 69
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 66 64
No Yes Solenopsis invicta v.2.2.3 Red fire ant 67 64
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 81 77
No Yes Atta cephalotes v1.1   73 70
No Yes Camponotus floridanus v3.3 Florida carpenter ant 99 90
No Yes Lucilia cuprina Australian sheep blowfly 54 50
No Yes Drosophila grimshawi 1.3   94 90
No Yes Drosophila willistoni 1.3   92 88
No Yes Drosophila pseudoobscura 2.13   125 120
No Yes Drosophila persimilis 1.3   114 109
No Yes Drosophila suzukii   97 88
No Yes Drosophila yakuba 1.3   86 82
No Yes Drosophila simulans 1.3   74 69
No Yes Drosophila sechellia 1.3   82 78
No Yes Drosophila melanogaster 76_5 Fruit fly 308 297
No Yes Drosophila erecta 1.3   88 84
No Yes Drosophila ananassae 1.3   91 87
No Yes Drosophila virilis 1.2   95 91
No Yes Drosophila mojavensis 1.3   93 89
No Yes Megaselia scalaris 22   43 42
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 117 111
No Yes Culex pipiens quinquefasciatus Southern house mosquito 103 99
No Yes Anopheles darlingi 22 American malaria mosquito 56 52
No Yes Anopheles gambiae 49_3j African malaria mosquito 123 119
No Yes Tribolium castaneum 3.0 Red flour beetle 83 79
No Yes Pediculus humanus corporis (Early assembly) Human body louse 82 78
No Yes Acyrthosiphon pisum Pea aphid 149 146
No Yes Rhodnius prolixus 22   81 80
No Yes Daphnia pulex Common water flea 268 232
No Yes Strigamia maritima 22   155 147
No Yes Sarcoptes scabiei   36 35
No Yes Tetranychus urticae Two-spotted spider mite 133 129
No Yes Ixodes scapularis (Preliminary) Black-legged tick 62 59
No Yes Pristionchus pacificus   190 164
No Yes Meloidogyne incognita Southern root-knot nematode 95 94
No Yes Meloidogyne hapla   77 75
No Yes Onchocerca volvulus 22   55 52
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 87 84
No Yes Caenorhabditis japonica   63 62
No Yes Caenorhabditis brenneri   349 326
No Yes Caenorhabditis remanei   407 376
No Yes Caenorhabditis elegans 76_235 Roundworm 250 244
No Yes Caenorhabditis briggsae 2   192 180
No Yes Trichinella spiralis 22   35 34
No Yes Hymenolepis microstoma   58 58
No Yes Echinococcus multilocularis   39 38
No Yes Echinococcus granulosus   37 36
No Yes Taenia solium Pork tapeworm 51 50
No Yes Schistosoma mansoni   40 40
No Yes Mnemiopsis leidyi Sea walnut 166 158
No Yes Thelohanellus kitauei   3 3
No Yes Acropora digitifera v1.0   199 185
No Yes Nematostella vectensis 1.0 Starlet sea anemone 171 162
No Yes Hydra vulgaris   78 75
No Yes Amphimedon queenslandica   49 44
No Yes Trichoplax adhaerens   42 40
No Yes Proterospongia sp. ATCC 50818   22 22
No Yes Monosiga brevicollis   14 13
No Yes Sphaeroforma arctica JP610   10 10
No Yes Capsaspora owczarzaki ATCC 30864   23 18
No Yes Conidiobolus coronatus NRRL28638 v1.0   13 12
No Yes Mortierella verticillata NRRL 6337   49 46
No Yes Phycomyces blakesleeanus   48 45
No Yes Rhizopus oryzae RA 99-880   30 27
No Yes Mucor circinelloides   26 23
No Yes Rhizomucor miehei CAU432   25 21
No Yes Malassezia globosa CBS 7966   10 10
No Yes Sporisorium reilianum 22   11 10
No Yes Ustilago maydis   9 8
No Yes Mixia osmundae IAM 14324 v1.0   8 7
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   10 10
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   8 8
No Yes Melampsora laricis-populina   11 11
No Yes Rhodotorula graminis WP1 v1.0   8 7
No Yes Sporobolomyces roseus IAM 13481   8 8
No Yes Microbotryum violaceum 22   11 11
No Yes Wallemia sebi v1.0   5 5
No Yes Sphaerobolus stellatus v1.0   62 60
No Yes Piloderma croceum F 1598 v1.0   72 71
No Yes Serpula lacrymans var. lacrymans S7.9   33 33
No Yes Coniophora puteana   59 56
No Yes Hydnomerulius pinastri v2.0   48 48
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   26 25
No Yes Pisolithus microcarpus 441 v1.0   42 41
No Yes Pisolithus tinctorius Marx 270 v1.0   62 60
No Yes Scleroderma citrinum Foug A v1.0   37 35
No Yes Coprinopsis cinerea okayama7 130 v3   47 45
No Yes Pleurotus ostreatus Oyster mushroom 37 32
No Yes Amanita thiersii Skay4041 v1.0   36 34
No Yes Amanita muscaria Koide v1.0 Fly agaric 44 42
No Yes Galerina marginata v1.0   101 100
No Yes Hebeloma cylindrosporum h7 v2.0   46 44
No Yes Laccaria bicolor S238N-H82   46 43
No Yes Agaricus bisporus var. bisporus   53 52
No Yes Schizophyllum commune   62 52
No Yes Stereum hirsutum FP-91666 SS1 v1.0   76 73
No Yes Heterobasidion annosum   39 38
No Yes Gloeophyllum trabeumv1.0   40 40
No Yes Punctularia strigosozonata v1.0   54 53
No Yes Sebacina vermifera MAFF 305830 v1.0   65 64
No Yes Fomitiporia mediterranea v1.0   34 33
No Yes Tulasnella calospora AL13/4D v1.0   49 47
No Yes Postia placenta   94 72
No Yes Wolfiporia cocos MD-104 SS10 v1.0   51 48
No Yes Fomitopsis pinicolav1.0   93 87
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   92 87
No Yes Phanerochaete chrysosporium RP-78 2.1   42 42
No Yes Dichomitus squalens   69 63
No Yes Trametes versicolor v1.0   101 98
No Yes Tremella mesenterica Witches' butter 16 15
No Yes Daldinia eschscholzii EC12 v1.0   17 16
No Yes Apiospora montagnei NRRL 25634 v1.0   30 29
No Yes Magnaporthe poae ATCC 64411 22   18 17
No Yes Magnaporthe grisea 70-15   22 21
No Yes Podospora anserina   19 18
No Yes Sporotrichum thermophile ATCC 42464   20 19
No Yes Thielavia terrestris NRRL 8126   17 16
No Yes Chaetomium globosum CBS 148.51   20 19
No Yes Neurospora tetrasperma   21 19
No Yes Neurospora discreta FGSC 8579   20 18
No Yes Neurospora crassa OR74A   23 21
No Yes Cryphonectria parasitica Chestnut blight fungus 19 18
No Yes Verticillium albo-atrum VaMs.102   14 14
No Yes Verticillium dahliae VdLs.17   18 17
No Yes Acremonium alcalophilumv 1.0   13 12
No Yes Glomerella graminicola 22   26 25
No Yes Fusarium graminearum   31 29
No Yes Nectria haematococca mpVI   25 24
No Yes Fusarium oxysporum f. sp. lycopersici 4286   34 33
No Yes Fusarium verticillioides 7600   29 28
No Yes Trichoderma asperellum CBS 433.97 v1.0   21 20
No Yes Trichoderma atroviride   21 20
No Yes Trichoderma citrinoviride v1.0   19 18
No Yes Trichoderma reesei 1.2   19 18
No Yes Trichoderma virens Gv29-8   22 21
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   22 21
No Yes Trichoderma harzianum CBS 226.95 v1.0   22 21
No Yes Amorphotheca resinae v1.0 Creosote fungus 25 23
No Yes Botrytis cinerea B05.10   52 51
No Yes Sclerotinia sclerotiorum   29 28
No Yes Blumeria graminis 22   9 8
No Yes Didymella exigua CBS 183.55 v1.0   30 28
No Yes Leptosphaeria maculans 22   34 32
No Yes Setosphaeria turcica v1.0   39 37
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   36 34
No Yes Cochliobolus victoriae FI3 v1.0   39 37
No Yes Cochliobolus carbonum 26-R-13 v1.0   36 35
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 23 22
No Yes Alternaria brassicicola   20 19
No Yes Cochliobolus lunatus m118 v2.0   26 24
No Yes Pyrenophora teres f. teres 22   38 34
No Yes Pyrenophora tritici-repentis   40 38
No Yes Stagonospora nodorum   58 57
No Yes Mycosphaerella graminicola IPO323   41 37
No Yes Zasmidium cellare ATCC 36951 v1.0   77 73
No Yes Dothistroma septosporum   46 45
No Yes Septoria musiva v1.0   25 24
No Yes Mycosphaerella fijiensis CIRAD86   34 32
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   43 42
No Yes Paracoccidioides brasiliensis Pb18   14 13
No Yes Coccidioides posadasii RMSCC 3488   20 18
No Yes Coccidioides immitis RS   22 20
No Yes Ajellomyces dermatitidis SLH14081   19 17
No Yes Histoplasma capsulatum class NAmI strain WU24   17 15
No Yes Microsporum canis CBS 113480   18 16
No Yes Trichophyton equinum CBS 127.97   14 12
No Yes Trichophyton verrucosum HKI 0517   12 12
No Yes Arthroderma benhamiae CBS 112371   14 13
No Yes Trichophyton tonsurans CBS 112818   16 14
No Yes Trichophyton rubrum CBS 118892   15 13
No Yes Uncinocarpus reesii 1704   20 19
No Yes Aspergillus zonatus v1.0   18 16
No Yes Penicillium chrysogenum Wisconsin 54-1255   18 16
No Yes Penicillium chrysogenum v1.0   24 22
No Yes Aspergillus acidus v1.0   20 18
No Yes Aspergillus fumigatus Af293   14 13
No Yes Aspergillus brasiliensis v1.0   20 18
No Yes Aspergillus nidulans FGSC A4   15 15
No Yes Aspergillus sydowii v1.0   24 23
No Yes Aspergillus versicolor v1.0   22 21
No Yes Aspergillus glaucus   22 20
No Yes Aspergillus carbonarius ITEM 5010   17 16
No Yes Neosartorya fischeri NRRL 181   16 14
No Yes Aspergillus terreus NIH2624   18 17
No Yes Aspergillus tubingensis v1.0   16 14
No Yes Aspergillus wentii v1.0   27 25
No Yes Aspergillus oryzae RIB40   15 13
No Yes Aspergillus niger 22   16 14
No Yes Aspergillus niger ATCC 1015   10 9
No Yes Aspergillus flavus NRRL3357   17 16
No Yes Aspergillus clavatus NRRL 1   17 15
No Yes Penicillium marneffei ATCC 18224   22 21
No Yes Tuber melanosporum Mel28 22   17 14
No Yes Tuber melanosporum Vittad Perigord truffle 18 15
No Yes Hansenula polymorpha v2.0   9 7
No Yes Dekkera bruxellensis CBS 2499 v2.0   9 7
No Yes Pichia membranifaciensv1.0   8 7
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   9 7
No Yes Candida dubliniensis CD36   9 7
No Yes Candida tropicalis MYA-3404   9 7
No Yes Candida parapsilosis   9 7
No Yes Candida albicans SC5314   10 8
No Yes Lodderomyces elongisporus NRRL YB-4239   9 7
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   8 6
No Yes Pichia stipitis CBS 6054   9 7
No Yes Candida guilliermondii ATCC 6260   8 6
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   10 8
No Yes Debaromyces hansenii   9 7
No Yes Wickerhamomyces anomalus   9 7
No Yes Pichia pastoris GS115   5 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   3 2
No Yes Yarrowia lipolytica CLIB122   27 25
No Yes Candida lusitaniae ATCC 42720   8 6
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   5 4
No Yes Vanderwaltozyma polyspora DSM 70294   8 7
No Yes Candida glabrata CBS138   7 6
No Yes Kluyveromyces thermotolerans CBS 6340   7 6
No Yes Lachancea kluyveri   8 6
No Yes Kluyveromyces waltii   7 6
No Yes Ashbya gossypii ATCC 10895   6 5
No Yes Zygosaccharomyces rouxii   6 5
No Yes Saccharomyces mikatae MIT   8 6
No Yes Saccharomyces paradoxus MIT   8 6
No Yes Saccharomyces cerevisiae 76 Baker's yeast 9 6
No Yes Saccharomyces bayanus MIT   8 6
No Yes Kluyveromyces lactis   8 6
No Yes Schizosaccharomyces cryophilus OY26 22   8 6
No Yes Schizosaccharomyces octosporus yFS286   8 6
No Yes Schizosaccharomyces japonicus yFS275   8 6
No Yes Schizosaccharomyces pombe Fission yeast 8 6
No Yes Catenaria anguillulae PL171 v1.0   30 30
No Yes Allomyces macrogynus ATCC 38327   30 29
No Yes Spizellomyces punctatus DAOM BR117   17 15
No Yes Dictyostelium discoideum   43 38
No Yes Dictyostelium purpureum   37 34
No Yes Entamoeba dispar 1.2   9 9
No Yes Entamoeba invadens 1.2   8 8
No Yes Entamoeba histolytica 1   10 10
No Yes Selaginella moellendorffii   85 82
No Yes Pinus taeda Loblolly pine 124 114
No Yes Picea abies Norway spruce 68 66
No Yes Eucalyptus grandis v201 Rose gum 123 117
No Yes Theobroma cacao B97-61/B2 v1 Cacao 73 70
No Yes Gossypium raimondii v221   236 232
No Yes Citrus clementina v165   145 140
No Yes Citrus sinensis v154 Sweet orange 168 163
No Yes Thellungiella halophila v173   119 117
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 136 132
No Yes Capsella rubella v183   117 115
No Yes Arabidopsis lyrata Lyrate rockcress 97 95
No Yes Arabidopsis thaliana 10 Thale cress 136 128
No Yes Carica papaya Papaya 66 64
No Yes Medicago truncatula Barrel medic 191 183
No Yes Phaseolus vulgaris v186 French bean 116 111
No Yes Glycine max v109 Soybean 180 174
No Yes Cucumis sativus v122 Cucumber 81 78
No Yes Fragaria vesca Wild strawberry 91 88
No Yes Malus domestica v196 Apple 174 169
No Yes Prunus persica v139 Peach 84 82
No Yes Linum usitatissimum v200 Flax 126 122
No Yes Manihot esculenta v147 Cassava 103 102
No Yes Populus trichocarpa v156 Black cottonwood 131 127
No Yes Vitis vinifera Wine grape 66 65
No Yes Mimulus guttatus v140 Spotted monkey flower 85 83
No Yes Solanum lycopersicum v.2.3 Tomato 92 90
No Yes Solanum tuberosum Potato 159 155
No Yes Actinidia chinensis Hongyang   96 94
No Yes Aquilegia coerulea v195   162 149
No Yes Triticum urartu 22   196 174
No Yes Triticum aestivum 22 Bread wheat 353 342
No Yes Aegilops tauschii 22   369 351
No Yes Brachypodium distachyon Stiff brome 139 136
No Yes Oryza barthii 22 African wild rice 239 173
No Yes Oryza meridionalis 22   208 150
No Yes Oryza glumaepatula 22   236 188
No Yes Oryza glaberrima African rice 159 158
No Yes Oryza punctata 22   191 157
No Yes Oryza nivara 22   246 188
No Yes Oryza brachyantha 22 Malo sina 112 108
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 235 229
No Yes Oryza sativa v193 Rice 235 229
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 115 109
No Yes Panicum virgatum v202 Switchgrass 413 404
No Yes Setaria italica v164 Foxtail millet 194 191
No Yes Zea mays subsp. mays Maize 161 158
No Yes Zea mays v181 Maize 178 175
No Yes Sorghum bicolor Sorghum 187 179
No Yes Musa balbisiana Balbis banana 120 117
No Yes Musa acuminata 22 Wild Malaysian banana 115 112
No Yes Amborella trichopoda 22   57 54
No Yes Physcomitrella patens   77 74
No Yes Coccomyxa subellipsoidea sp. C-169 v2   17 16
No Yes Asterochloris sp. Cgr/DA1pho v1.0   12 12
No Yes Chlorella variabilis sp. NC64A   9 9
No Yes Chlorella vulgaris   19 17
No Yes Volvox carteri f. nagariensis   30 30
No Yes Volvox carteri v199   24 24
No Yes Chlamydomonas reinhardtii 4.0   46 46
No Yes Ostreococcus sp. RCC809   3 3
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   5 5
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   6 6
No Yes Micromonas pusilla CCMP1545 v3.0   8 8
No Yes Cyanidioschyzon merolae strain 10D 22   5 4
No Yes Cyanidioschyzon merolae   5 4
No Yes Porphyridium purpureum 02_2012   10 10
No Yes Thecamonas trahens ATCC 50062   28 26
No Yes Bigelowiella natans CCMP2755 22   26 26
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   38 38
No Yes Leishmania mexicana 2.4   11 10
No Yes Leishmania major strain Friedlin   11 10
No Yes Leishmania infantum JPCM5 2.4   11 10
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   12 11
No Yes Trypanosoma vivax   14 13
No Yes Trypanosoma cruzi strain CL Brener   13 12
No Yes Trypanosoma congolense 2.4   18 17
No Yes Trypanosoma brucei gambiense v4.1   15 14
No Yes Trypanosoma brucei TREU927 v4.1   14 13
No Yes Ectocarpus siliculosus   30 28
No Yes Aureococcus anophagefferens   14 14
No Yes Albugo laibachii 22   31 29
No Yes Pythium iwayamai DAOM BR242034 22   18 17
No Yes Pythium arrhenomanes ATCC 12531 22   16 15
No Yes Pythium ultimum v1.7-2   20 18
No Yes Pythium aphanidermatum DAOM BR444 22   16 16
No Yes Pythium irregulare DAOM BR486 22   21 19
No Yes Pythium vexans DAOM BR484 22   21 19
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 21 20
No Yes Phytophthora sojae 1.1   19 18
No Yes Phytophthora infestans T30-4   22 20
No Yes Phytophthora capsici   19 18
No Yes Hyaloperonospora arabidopsidis 22   14 13
No Yes Phaeodactylum tricornutumCCAP 1055/1   16 15
No Yes Fragilariopsis cylindrus   78 78
No Yes Thalassiosira pseudonana CCMP1335   23 23
No Yes Perkinsus marinus ATCC 50983   29 29
No Yes Paramecium tetraurelia   27 27
No Yes Tetrahymena thermophila SB210 1   13 12
No Yes Ichthyophthirius multifiliis strain G5   4 4
No Yes Cryptosporidium hominis   5 5
No Yes Cryptosporidium muris   7 7
No Yes Cryptosporidium parvum Iowa II   5 5
No Yes Neospora caninum   13 13
No Yes Toxoplasma gondii VEG   14 13
No Yes Toxoplasma gondii ME49   15 14
No Yes Toxoplasma gondii GT1   15 14
No Yes Babesia bovis T2Bo   8 8
No Yes Theileria parva   4 4
No Yes Theileria annulata   4 4
No Yes Plasmodium falciparum 3D7   3 3
No Yes Plasmodium vivax SaI-1 7.0   4 4
No Yes Plasmodium knowlesi strain H   4 4
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   4 4
No Yes Plasmodium berghei ANKA   4 4
No Yes Symbiodinium minutum clade B1 v1.2   149 124
No Yes Naegleria gruberi   173 152
No Yes Trichomonas vaginalis   48 48
No Yes Guillardia theta CCMP2712 v1.0   31 29
No Yes Emiliania huxleyi CCMP1516   227 210
No Yes Candidatus Protochlamydia amoebophila UWE25   42 42
No Yes Parachlamydia acanthamoebae UV-7   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 295 285
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 257 250
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 130 126
No Yes Ascaris suum Victoria/Ghent Pig roundworm 65 62
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 222 216
No Yes Cryptococcus neoformans var. grubii H99   11 10
No Yes Cryptococcus neoformans B-3501A   9 8
No Yes Cryptococcus neoformans JEC21   5 5
No Yes Paracoccidioides brasiliensis Pb01   15 14
No Yes Paracoccidioides brasiliensis Pb03   16 15
No Yes Coccidioides posadasii str. Silveira   18 17
No Yes Coccidioides immitis RMSCC 3703   18 18
No Yes Coccidioides immitis RMSCC 2394   18 16
No Yes Coccidioides immitis H538.4   14 13
No Yes Ajellomyces dermatitidis ER-3   18 16
No Yes Histoplasma capsulatum H143   18 16
No Yes Histoplasma capsulatum H88   20 18
No Yes Histoplasma capsulatum G186AR   21 19
No Yes Aspergillus fumigatus A1163   18 17
No Yes Candida albicans WO-1   9 7
No Yes Saccharomyces cerevisiae UC5   9 6
No Yes Saccharomyces cerevisiae PW5   8 6
No Yes Saccharomyces cerevisiae FL100   6 4
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   7 4
No Yes Saccharomyces cerevisiae CBS7960   8 5
No Yes Saccharomyces cerevisiae YJM269   7 4
No Yes Saccharomyces cerevisiae T7   9 6
No Yes Saccharomyces cerevisiae FostersB   6 5
No Yes Saccharomyces cerevisiae FostersO   7 5
No Yes Saccharomyces cerevisiae VL3   8 6
No Yes Saccharomyces cerevisiae Vin13   8 6
No Yes Saccharomyces cerevisiae LalvinQA23   7 5
No Yes Saccharomyces cerevisiae AWRI796   4 4
No Yes Saccharomyces cerevisiae Sigma1278b   9 6
No Yes Saccharomyces cerevisiae W303   9 6
No Yes Saccharomyces cerevisiae JAY291   9 6
No Yes Saccharomyces cerevisiae AWRI1631   7 5
No Yes Saccharomyces cerevisiae YPS163   5 3
No Yes Saccharomyces cerevisiae M22   5 3
No Yes Saccharomyces cerevisiae T73   6 4
No Yes Saccharomyces cerevisiae CLIB215   8 6
No Yes Saccharomyces cerevisiae Y10   5 4
No Yes Saccharomyces cerevisiae YJM789   9 6
No Yes Saccharomyces cerevisiae YJM789   9 6
No Yes Saccharomyces cerevisiae RM11-1a   9 6
No Yes Saccharomyces cerevisiae RM11-1a   9 6
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 9 6
No Yes Schizosaccharomyces pombe 972h-   8 6
No Yes Batrachochytrium dendrobatidis JEL423   11 10
No Yes Batrachochytrium dendrobatidis JAM81   13 12
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 72 69
No Yes Hordeum vulgare 22 Domesticated barley 204 187
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 235 227
No Yes Trypanosoma brucei Lister 427 v4.1   13 12
No Yes Neospora caninum Nc-Liverpool 6.2   13 13
No Yes Plasmodium falciparum HB3   2 2
No Yes Plasmodium falciparum Dd2   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 632 610
No Yes Homo sapiens (NCBI version) Human 288 273
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 232 222
No Yes Heliconius numata (Incomplete)   20 20
No Yes Loa loa v3.3 (Request) Eye worm 65 62
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 50 48
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 53 50
No Yes Moniliophthora perniciosa FA553 (Genome survey)   6 6
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 9 9
No Yes Lotus japonicus (Early assembly)   84 81
No Yes Malus x domestica (Duplicate) Apple 174 169
No Yes Ricinus communis (Early assembly) Castor bean 71 68
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   175 165
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 91 89
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 92 90
No Yes Phoenix dactylifera (Early draft) Date palm 53 51
No Yes Homo sapiens 69_37 Human 208 198
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 185 176
No Yes Gorilla gorilla 69_3.1 Western gorilla 189 181
No Yes Pongo abelii 69_2 Sumatran orangutan 189 179
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 171 161
No Yes Macaca mulatta 69_1 Rhesus monkey 186 176
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 187 178
No Yes Otolemur garnettii 69_3 Small-eared galago 198 188
No Yes Microcebus murinus 69_1 Gray mouse lemur 131 125
No Yes Rattus norvegicus 69_3.4 Norway rat 195 186
No Yes Mus musculus 69_38 House mouse 245 234
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 144 137
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 181 174
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 190
No Yes Oryctolagus cuniculus 69_2 Rabbit 181 171
No Yes Ochotona princeps 69 American pika 143 134
No Yes Tupaia belangeri 69 Northern tree shrew 108 102
No Yes Sus scrofa 69_10.2 Pig 185 176
No Yes Bos taurus 69_3.1 Cattle 195 183
No Yes Vicugna pacos 69_1 Alpaca 93 88
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 166 157
No Yes Mustela putorius furo 69_1.0 Domestic ferret 189 180
No Yes Ailuropoda melanoleuca 69_1 Giant panda 181 172
No Yes Canis familiaris 69_3.1 Dog 185 176
No Yes Felis catus 69 Domestic cat 113 107
No Yes Equus caballus 69_2 Horse 173 163
No Yes Myotis lucifugus 69_2.0 Little brown bat 199 190
No Yes Pteropus vampyrus 69_1 Large flying fox 162 154
No Yes Sorex araneus 69_1 European shrew 104 99
No Yes Erinaceus europaeus 69 Western European hedgehog 118 113
No Yes Procavia capensis 69_1 Cape rock hyrax 137 132
No Yes Loxodonta africana 69_3 African savanna elephant 182 172
No Yes Echinops telfairi 69 Small Madagascar hedgehog 135 128
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 116 109
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 95 91
No Yes Macropus eugenii 69_1.0 Tammar wallaby 140 132
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 167 160
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 195 184
No Yes Ornithorhynchus anatinus 69_5 Platypus 141 136
No Yes Petromyzon marinus 69_7.0 Sea lamprey 81 77
No Yes Meleagris gallopavo 69_2 Turkey 151 143
No Yes Gallus gallus 69_2 Chicken 166 157
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 158 152
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 165
No Yes Anolis carolinensis 69_2.0 Green anole 175 166
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 176 169
No Yes Latimeria chalumnae 69_1 Coelacanth 202 193
No Yes Gadus morhua 69_1 Atlantic cod 197 190
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 205 197
No Yes Takifugu rubripes 69_4 Torafugu 216 208
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 207 200
No Yes Oryzias latipes 69_1 Japanese medaka 191 184
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 228 220
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 235 227
No Yes Danio rerio 69_9 Zebrafish 241 229
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 65 63
No Yes Ciona intestinalis 69 Vase tunicate 103 100
No Yes Drosophila melanogaster 69_5 Fruit fly 89 85
No Yes Caenorhabditis elegans 69_215 Roundworm 182 177
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 9 6
No Yes Arabidopsis thaliana 10 Thale cress 105 101
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   136594 129679
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes Protozoadb 2010_08 (Protozoadb)   329 320
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10662 10094
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   105779 100007
No Yes Global Ocean Sampling Expedition (GOS)   136 134
No Yes NCBI viral sequences (Viral)   178 173
No Yes PDB chains (SCOP 1.75) (PDB)   24 24
No Yes Protein Data Bank (all PDB sequenc)   555 549
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1076 1076
No Yes TargetDB (Targets)   391 374
No Yes UniProt viral sequences (Viral)   170 169

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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