Select to display Genome Domains Proteins No ALL 194765 194765 No Homo sapiens 76_38 Human 549 207 No Pan troglodytes 76_2.1.4 Chimpanzee 156 52 No Gorilla gorilla 76_3.1 Western gorilla 240 78 No Pongo abelii 76_2 Sumatran orangutan 156 55 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 174 54 No Papio anubis 76 Olive baboon 142 57 No Macaca mulatta 76_1 Rhesus monkey 300 105 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 314 109 No Otolemur garnettii 76_3 Small-eared galago 156 52 No Microcebus murinus 76_1 Gray mouse lemur 125 46 No Rattus norvegicus 76_5.0 Norway rat 156 61 No Mus musculus 76_38 House mouse 266 89 No Dipodomys ordii 76_1 Ord's kangaroo rat 133 42 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 129 54 No Heterocephalus glaber v1.7-2 Naked mole-rat 157 51 No Cavia porcellus 76_3 Domestic guinea pig 145 52 No Oryctolagus cuniculus 76_2 Rabbit 158 53 No Ochotona princeps 76 American pika 133 47 No Tupaia belangeri 76 Northern tree shrew 133 47 No Sus scrofa 76_10.2 Pig 157 76 No Bos taurus 76_3.1 Cattle 164 61 No Ovis aries 76_3.1 Sheep 205 64 No Vicugna pacos 76_1 Alpaca 114 39 No Tursiops truncatus 76_1 Bottlenose dolphin 149 49 No Mustela putorius furo 76_1.0 Domestic ferret 167 54 No Ailuropoda melanoleuca 76_1 Giant panda 178 56 No Canis familiaris 76_3.1 Dog 219 77 No Felis catus 76_6.2 Domestic cat 157 53 No Equus caballus 76_2 Horse 304 67 No Myotis lucifugus 76_2.0 Little brown bat 132 45 No Pteropus vampyrus 76_1 Large flying fox 155 53 No Sorex araneus 76_1 European shrew 103 34 No Erinaceus europaeus 76 Western European hedgehog 135 44 No Procavia capensis 76_1 Cape rock hyrax 130 44 No Loxodonta africana 76_3 African savanna elephant 182 62 No Echinops telfairi 76 Small Madagascar hedgehog 130 42 No Dasypus novemcinctus 76_2 Nine-banded armadillo 189 68 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 101 37 No Macropus eugenii 76_1.0 Tammar wallaby 131 45 No Sarcophilus harrisii 76_7.0 Tasmanian devil 137 60 No Monodelphis domestica 76_5 Gray short-tailed opossum 152 54 No Ornithorhynchus anatinus 76_5 Platypus 140 63 No Saccoglossus kowalevskii v3.0 623 240 No Petromyzon marinus 76_7.0 Sea lamprey 80 30 No Meleagris gallopavo 76_2 Turkey 143 61 No Gallus gallus 76_4 Chicken 147 49 No Anas platyrhynchos 76_1.0 Mallard 150 53 No Taeniopygia guttata 76_3.2.4 Zebra finch 135 51 No Ficedula albicollis 76_1.0 Collared flycatcher 147 48 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 171 60 No Anolis carolinensis 76_2.0 Green anole 135 44 No Xenopus laevis African clawed frog 238 98 No Xenopus tropicalis 76_4.2 Tropical clawed frog 219 83 No Latimeria chalumnae 76_1 Coelacanth 166 71 No Lepisosteus oculatus 76 Spotted gar 215 73 No Gadus morhua 76_1 Atlantic cod 166 59 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 256 95 No Takifugu rubripes 76_4 Torafugu 616 235 No Gasterosteus aculeatus 76_1 Three-spined stickleback 195 66 No Oryzias latipes 76_1 Japanese medaka 164 61 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 179 56 No Poecilia formosa 76 Amazon molly 174 60 No Oreochromis niloticus 76_1.0 Nile tilapia 243 93 No Astyanax mexicanus 76 Mexican tetra 184 71 No Danio rerio 76_9 Zebrafish 276 104 No Oikopleura dioica 168 103 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 203 66 No Ciona intestinalis 76 Vase tunicate 132 71 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 606 293 No Adineta vaga 32 27 No Octopus bimaculoides 280 108 50 No Crassostrea gigas 22 Pacific oyster 226 128 Yes Lottia gigantea Owl limpet 146 79 No Helobdella robusta 83 43 No Capitella sp. I 188 119 No Danaus plexippus OGS1.0 Monarch butterfly 80 33 No Heliconius melpomene Postman butterfly 31 20 No Bombyx mori Domestic silkworm 46 26 No Nasonia vitripennis Jewel wasp 57 22 No Apis mellifera 38.2d (Not maintained) Honey bee 213 44 No Harpegnathos saltator v3.3 Jerdon's jumping ant 64 22 No Linepithema humile v1.1 Argentine ant 74 29 No Pogonomyrmex barbatus v1.2 Red harvester ant 57 32 No Solenopsis invicta v.2.2.3 Red fire ant 61 28 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 68 25 No Atta cephalotes v1.1 67 31 No Camponotus floridanus v3.3 Florida carpenter ant 69 25 No Lucilia cuprina Australian sheep blowfly 95 28 No Drosophila grimshawi 1.3 102 32 No Drosophila willistoni 1.3 93 32 No Drosophila pseudoobscura 2.13 96 32 No Drosophila persimilis 1.3 89 31 No Drosophila suzukii 129 33 No Drosophila yakuba 1.3 96 31 No Drosophila simulans 1.3 63 29 No Drosophila sechellia 1.3 81 30 No Drosophila melanogaster 76_5 Fruit fly 150 48 No Drosophila erecta 1.3 95 32 No Drosophila ananassae 1.3 94 32 No Drosophila virilis 1.2 93 31 No Drosophila mojavensis 1.3 95 33 No Megaselia scalaris 22 25 17 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 109 35 No Culex pipiens quinquefasciatus Southern house mosquito 75 31 No Anopheles darlingi 22 American malaria mosquito 60 19 No Anopheles gambiae 49_3j African malaria mosquito 65 25 No Tribolium castaneum 3.0 Red flour beetle 76 29 No Pediculus humanus corporis Human body louse 54 24 No Acyrthosiphon pisum Pea aphid 92 16 No Rhodnius prolixus 22 93 39 No Daphnia pulex Common water flea 170 98 No Strigamia maritima 22 104 39 No Sarcoptes scabiei 63 27 No Tetranychus urticae Two-spotted spider mite 109 48 No Ixodes scapularis Black-legged tick 94 44 No Pristionchus pacificus 144 115 No Meloidogyne incognita Southern root-knot nematode 56 27 No Meloidogyne hapla 28 14 No Onchocerca volvulus 22 62 23 No Brugia malayi WS250 Agent of lymphatic filariasis 74 26 No Caenorhabditis japonica 79 39 No Caenorhabditis brenneri 149 99 No Caenorhabditis remanei 131 84 No Caenorhabditis elegans 76_235 Roundworm 143 86 No Caenorhabditis briggsae 2 108 61 No Trichinella spiralis 22 94 30 No Hymenolepis microstoma 13 4 No Echinococcus multilocularis 14 5 No Echinococcus granulosus 14 5 No Taenia solium Pork tapeworm 9 7 No Schistosoma mansoni 18 10 No Mnemiopsis leidyi Sea walnut 18 10 No Thelohanellus kitauei 2 2 No Acropora digitifera v1.0 253 159 No Nematostella vectensis 1.0 Starlet sea anemone 130 76 No Hydra vulgaris 70 28 No Amphimedon queenslandica 10 8 No Trichoplax adhaerens 63 24 No Proterospongia sp. ATCC 50818 6 4 No Monosiga brevicollis 4 2 No Sphaeroforma arctica JP610 1 1 No Capsaspora owczarzaki ATCC 30864 7 6 No Mortierella verticillata NRRL 6337 2 2 No Rhizomucor miehei CAU432 1 1 No Catenaria anguillulae PL171 v1.0 1 1 No Allomyces macrogynus ATCC 38327 2 2 No Spizellomyces punctatus DAOM BR117 2 2 No Dictyostelium discoideum 1 1 No Dictyostelium purpureum 1 1 No Manihot esculenta v147 Cassava 1 1 No Actinidia chinensis Hongyang 2 1 No Amborella trichopoda 22 1 1 No Coccomyxa subellipsoidea sp. C-169 v2 2 1 No Asterochloris sp. Cgr/DA1pho v1.0 1 1 No Chlorella vulgaris 2 1 No Volvox carteri f. nagariensis 1 1 No Volvox carteri v199 1 1 No Chlamydomonas reinhardtii 4.0 1 1 No Bathycoccus prasinos 1 1 No Thecamonas trahens ATCC 50062 39 25 No Bigelowiella natans CCMP2755 22 5 3 No Cyanophora paradoxa 80 32 No Trypanosoma vivax 1 1 No Trypanosoma cruzi strain CL Brener 1 1 No Trypanosoma brucei gambiense v4.1 1 1 No Trypanosoma brucei TREU927 v4.1 1 1 No Ectocarpus siliculosus 1 1 No Aureococcus anophagefferens 1 1 No Pythium iwayamai DAOM BR242034 22 3 3 No Pythium aphanidermatum DAOM BR444 22 2 2 No Pythium vexans DAOM BR484 22 3 2 No Phytophthora sojae 1.1 1 1 No Phytophthora infestans T30-4 1 1 No Symbiodinium minutum clade B1 v1.2 15 13 No Trichomonas vaginalis 3 3 No Guillardia theta CCMP2712 v1.0 20 18 No Emiliania huxleyi CCMP1516 34 31 No [Ruminococcus] obeum 1 1 No Saprospira grandis str. Lewin 3 2 No Flexibacter litoralis DSM 6794 3 1 No Marivirga tractuosa DSM 4126 1 1 No Prevotella ruminicola 23 1 1 No Fluviicola taffensis DSM 16823 4 4 No Lacinutrix sp. 5H-3-7-4 2 2 No Croceibacter atlanticus HTCC2559 4 2 No Aequorivita sublithincola DSM 14238 2 2 No Zobellia galactanivorans 1 1 No Cellulophaga algicola DSM 14237 1 1 No Cellulophaga lytica DSM 7489 1 1 No Flavobacteriaceae bacterium 3519-10 1 1 No Weeksella virosa DSM 16922 1 1 No Flavobacterium indicum GPTSA100-9 3 3 No Flavobacterium psychrophilum JIP02/86 1 1 No Flavobacterium branchiophilum FL-15 4 2 No Flavobacterium columnare ATCC 49512 1 1 No Bacteriovorax marinus SJ 1 1 No Bdellovibrio bacteriovorus HD100 4 3 No Sulfurovum sp. NBC37-1 1 1 No Pseudoalteromonas atlantica T6c 1 1 No Glaciecola sp. 4H-3-7+YE-5 1 1 No Aciduliprofundum sp. MAR08-339 1 1 No Aciduliprofundum boonei T469 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 244 107 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 120 38 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 73 29 No Ascaris suum Victoria/Ghent Pig roundworm 61 24 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 136 80 No Batrachochytrium dendrobatidis JAM81 1 1 No Trypanosoma brucei Lister 427 v4.1 1 1 No Nonlabens dokdonensis DSW-6 4 4 No Psychroflexus torquis ATCC 700755 1 1 No Bdellovibrio exovorus JSS 1 1 No Bdellovibrio bacteriovorus str. Tiberius 5 4 No Desulfobacula toluolica Tol2 1 1 No Homo sapiens 75_37 (old version GRC) Human 594 229 No Homo sapiens Human 274 99 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 162 54 No Heliconius numata 1 1 No Loa loa v3.3 (Request) Eye worm 59 22 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 55 35 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 40 15 No Lotus japonicus 1 1 No Homo sapiens 69_37 Human 167 55 No Pan troglodytes 69_2.1.4 Chimpanzee 156 52 No Gorilla gorilla 69_3.1 Western gorilla 160 55 No Pongo abelii 69_2 Sumatran orangutan 152 53 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 153 50 No Macaca mulatta 69_1 Rhesus monkey 168 58 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 156 53 No Otolemur garnettii 69_3 Small-eared galago 156 52 No Microcebus murinus 69_1 Gray mouse lemur 125 46 No Rattus norvegicus 69_3.4 Norway rat 132 51 No Mus musculus 69_38 House mouse 154 53 No Dipodomys ordii 69_1 Ord's kangaroo rat 133 42 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 115 47 No Cavia porcellus 69_3 Domestic guinea pig 141 49 No Oryctolagus cuniculus 69_2 Rabbit 127 51 No Ochotona princeps 69 American pika 133 47 No Tupaia belangeri 69 Northern tree shrew 133 47 No Sus scrofa 69_10.2 Pig 126 57 No Bos taurus 69_3.1 Cattle 153 55 No Vicugna pacos 69_1 Alpaca 114 39 No Tursiops truncatus 69_1 Bottlenose dolphin 149 49 No Mustela putorius furo 69_1.0 Domestic ferret 153 52 No Ailuropoda melanoleuca 69_1 Giant panda 138 49 No Canis familiaris 69_3.1 Dog 156 53 No Felis catus 69 Domestic cat 112 42 No Equus caballus 69_2 Horse 151 48 No Myotis lucifugus 69_2.0 Little brown bat 131 44 No Pteropus vampyrus 69_1 Large flying fox 155 53 No Sorex araneus 69_1 European shrew 103 34 No Erinaceus europaeus 69 Western European hedgehog 135 44 No Procavia capensis 69_1 Cape rock hyrax 130 44 No Loxodonta africana 69_3 African savanna elephant 140 47 No Echinops telfairi 69 Small Madagascar hedgehog 130 42 No Dasypus novemcinctus 69_2 Nine-banded armadillo 115 47 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 101 37 No Macropus eugenii 69_1.0 Tammar wallaby 131 45 No Sarcophilus harrisii 69_7.0 Tasmanian devil 121 49 No Monodelphis domestica 69_5 Gray short-tailed opossum 151 53 No Ornithorhynchus anatinus 69_5 Platypus 136 61 No Petromyzon marinus 69_7.0 Sea lamprey 79 29 No Meleagris gallopavo 69_2 Turkey 118 50 No Gallus gallus 69_2 Chicken 137 45 No Taeniopygia guttata 69_3.2.4 Zebra finch 131 48 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 146 50 No Anolis carolinensis 69_2.0 Green anole 131 44 No Xenopus tropicalis 69_4.2 Tropical clawed frog 191 68 No Latimeria chalumnae 69_1 Coelacanth 144 62 No Gadus morhua 69_1 Atlantic cod 165 58 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 176 70 No Takifugu rubripes 69_4 Torafugu 154 61 No Gasterosteus aculeatus 69_1 Three-spined stickleback 175 57 No Oryzias latipes 69_1 Japanese medaka 137 46 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 179 56 No Oreochromis niloticus 69_1.0 Nile tilapia 194 63 No Danio rerio 69_9 Zebrafish 164 69 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 91 36 No Ciona intestinalis 69 Vase tunicate 131 70 No Drosophila melanogaster 69_5 Fruit fly 98 29 No Caenorhabditis elegans 69_215 Roundworm 121 70 No 3_050719R (meta-genome) 1 1 No 4_050719Q (meta-genome) 2 2 No 5_050719P (meta-genome) 6 6 No 6_Upper_euphotic (meta-genome) 1 1 No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 1 1 No Bath Hot Springs, planktonic community (meta-genome) 2 1 No Combined (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 3 3 No Dump top (Dump top) (meta-genome) 2 2 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 8 6 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 2 2 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 3 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 1 1 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 1 1 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 2 2 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 4 4 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 1 1 No NCBI 2017_08 genome 81204 31567 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 4 4 No Protozoadb 2010_08 (Protozoadb) 9 9 No Sludge/US, Phrap Assembly (meta-genome) 5 5 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 1 1 No STRING v9.0.5 (STRING) 6977 2935 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 2 2 No Uniprot 2018_03 genome 58517 26023 No Global Ocean Sampling Expedition (GOS) 118 110 No NCBI viral sequences (Viral) 2 2 No PDB chains (SCOP 1.75 ) (PDB) 8 7 No Protein Data Bank (all PDB sequenc) 106 66 No SCOP2 SCOPe CATH ECOD (all domain sequ) 174 174 No TargetDB 125 63 No UniProt 3 3
