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  Home > Genomes > Mus musculus 76_38 > Spermadhesin, CUB domain domains


Spermadhesin, CUB domain superfamily domain assignments
in
Mus musculus 76_38

Assignment details

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Mus musculus 76_38 has 266 significant domains in 89 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000000646   1.15e-22   413-524   Spermadhesin, CUB domain  
  2.88e-20   590-700   Spermadhesin, CUB domain  
  0.000000000106   236-354   Spermadhesin, CUB domain  
ENSMUSP00000007423   7.72e-25   811-919   Spermadhesin, CUB domain  
ENSMUSP00000015498   6.15e-37   32-142   Spermadhesin, CUB domain  
  1.27e-33   153-266   Spermadhesin, CUB domain  
ENSMUSP00000016907   4.19e-24   832-940   Spermadhesin, CUB domain  
ENSMUSP00000017086   0.000000000000196   335-451   Spermadhesin, CUB domain  
  0.000000017   219-335   Spermadhesin, CUB domain  
ENSMUSP00000020662   1.28e-24   214-320   Spermadhesin, CUB domain  
ENSMUSP00000022693   8.77e-38   751-862   Spermadhesin, CUB domain  
  1.26e-36   447-549   Spermadhesin, CUB domain  
  2.62e-36   596-706   Spermadhesin, CUB domain  
  7.85e-36   331-440   Spermadhesin, CUB domain  
  1.31e-30   887-980   Spermadhesin, CUB domain  
ENSMUSP00000022782   2.49e-17   193-304   Spermadhesin, CUB domain  
  0.000000000811   35-135   Spermadhesin, CUB domain  
ENSMUSP00000022916   1.83e-31   54-157   Spermadhesin, CUB domain  
  3.4e-26   259-370   Spermadhesin, CUB domain  
ENSMUSP00000023566   4.32e-28   575-678   Spermadhesin, CUB domain  
  1.22e-16   276-380   Spermadhesin, CUB domain  
ENSMUSP00000025986   3.14e-37   465-570   Spermadhesin, CUB domain  
  3.14e-37   617-727   Spermadhesin, CUB domain  
  1.44e-35   778-884   Spermadhesin, CUB domain  
  2.62e-35   352-461   Spermadhesin, CUB domain  
  2.22e-28   908-1001   Spermadhesin, CUB domain  
ENSMUSP00000026917   6.28e-33   146-263   Spermadhesin, CUB domain  
  1.23e-32   26-141   Spermadhesin, CUB domain  
ENSMUSP00000027112   1.31e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000028612   1.7e-33   123-239   Spermadhesin, CUB domain  
ENSMUSP00000028781   1.96e-22   127-249   Spermadhesin, CUB domain  
ENSMUSP00000029652   1.1e-21   55-162   Spermadhesin, CUB domain  
ENSMUSP00000031731   3.79e-35   158-271   Spermadhesin, CUB domain  
  4.06e-35   36-146   Spermadhesin, CUB domain  
ENSMUSP00000034478   4.32e-28   339-446   Spermadhesin, CUB domain  
  5.76e-21   214-332   Spermadhesin, CUB domain  
ENSMUSP00000034654   3.4e-36   306-420   Spermadhesin, CUB domain  
  1.01e-31   150-259   Spermadhesin, CUB domain  
ENSMUSP00000037168   9.03e-33   159-265   Spermadhesin, CUB domain  
  1.44e-17   53-145   Spermadhesin, CUB domain  
ENSMUSP00000038366   3.53e-22   808-916   Spermadhesin, CUB domain  
ENSMUSP00000039915   2.22e-30   75-184   Spermadhesin, CUB domain  
ENSMUSP00000042057   0.000034   232-274   Spermadhesin, CUB domain  
  0.0929   554-592   Spermadhesin, CUB domain  
ENSMUSP00000042578   0.000000000194   53-174   Spermadhesin, CUB domain  
  0.0432   181-288   Spermadhesin, CUB domain  
ENSMUSP00000042883   5.1e-24   49-166   Spermadhesin, CUB domain  
ENSMUSP00000043055   6.93e-31   40-147   Spermadhesin, CUB domain  
ENSMUSP00000044835   3.53e-24   721-829   Spermadhesin, CUB domain  
ENSMUSP00000046369   7.46e-20   217-323   Spermadhesin, CUB domain  
ENSMUSP00000049729   1.01e-30   26-136   Spermadhesin, CUB domain  
  3.79e-28   184-295   Spermadhesin, CUB domain  
ENSMUSP00000052034   4.32e-28   560-663   Spermadhesin, CUB domain  
  1.19e-16   261-365   Spermadhesin, CUB domain  
ENSMUSP00000056240   7.07e-25   54-164   Spermadhesin, CUB domain  
ENSMUSP00000057002   4.06e-35   183-296   Spermadhesin, CUB domain  
  4.45e-35   36-146   Spermadhesin, CUB domain  
ENSMUSP00000057340   4.32e-32   50-154   Spermadhesin, CUB domain  
  1.16e-18   169-293   Spermadhesin, CUB domain  
ENSMUSP00000061401   1.44e-38   30-141   Spermadhesin, CUB domain  
  1.02e-34   145-253   Spermadhesin, CUB domain  
  1.03e-32   256-370   Spermadhesin, CUB domain  
ENSMUSP00000061529   4.06e-31   555-667   Spermadhesin, CUB domain  
  1.83e-23   270-377   Spermadhesin, CUB domain  
  0.0000000000144   794-839   Spermadhesin, CUB domain  
ENSMUSP00000063707   2.36e-29   22-140   Spermadhesin, CUB domain  
  6.28e-28   191-303   Spermadhesin, CUB domain  
ENSMUSP00000066999   5.76e-30   25-137   Spermadhesin, CUB domain  
  6.15e-25   180-293   Spermadhesin, CUB domain  
ENSMUSP00000068203   1.06e-24   31-140   Spermadhesin, CUB domain  
ENSMUSP00000069231   2.09e-38   134-247   Spermadhesin, CUB domain  
ENSMUSP00000069379   1.44e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000070560   1.57e-37   773-885   Spermadhesin, CUB domain  
  1.7e-36   467-571   Spermadhesin, CUB domain  
  1.83e-35   618-728   Spermadhesin, CUB domain  
  1.96e-35   349-460   Spermadhesin, CUB domain  
  4.58e-27   909-1002   Spermadhesin, CUB domain  
ENSMUSP00000074642   1.31e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000074847   1.57e-24   568-678   Spermadhesin, CUB domain  
  1.03e-17   386-507   Spermadhesin, CUB domain  
  0.0000000000000379   221-328   Spermadhesin, CUB domain  
ENSMUSP00000075434   3.01e-24   802-911   Spermadhesin, CUB domain  
ENSMUSP00000076514   1.1e-20   89-211   Spermadhesin, CUB domain  
ENSMUSP00000078454   1.57e-24   568-678   Spermadhesin, CUB domain  
  1.05e-17   386-507   Spermadhesin, CUB domain  
  0.0000000000000379   221-328   Spermadhesin, CUB domain  
ENSMUSP00000080751   5.23e-34   751-866   Spermadhesin, CUB domain  
  6.41e-33   1968-2088   Spermadhesin, CUB domain  
  1.31e-32   1451-1557   Spermadhesin, CUB domain  
  4.19e-32   588-692   Spermadhesin, CUB domain  
  6.54e-32   1795-1915   Spermadhesin, CUB domain  
  2.36e-31   208-310   Spermadhesin, CUB domain  
  3.66e-31   31-139   Spermadhesin, CUB domain  
  4.84e-30   1270-1391   Spermadhesin, CUB domain  
  1.44e-28   2139-2258   Spermadhesin, CUB domain  
  2.22e-28   411-521   Spermadhesin, CUB domain  
  6.54e-28   2326-2429   Spermadhesin, CUB domain  
  6.93e-26   930-1038   Spermadhesin, CUB domain  
  6.15e-25   1103-1212   Spermadhesin, CUB domain  
  3.53e-22   1618-1733   Spermadhesin, CUB domain  
ENSMUSP00000081556   4.06e-35   1494-1601   Spermadhesin, CUB domain  
  1.44e-32   999-1108   Spermadhesin, CUB domain  
  1.7e-32   1125-1234   Spermadhesin, CUB domain  
  2.49e-32   883-992   Spermadhesin, CUB domain  
  3.14e-31   1241-1350   Spermadhesin, CUB domain  
ENSMUSP00000087327   2.09e-33   29-143   Spermadhesin, CUB domain  
  6.93e-33   189-301   Spermadhesin, CUB domain  
ENSMUSP00000089009   7.85e-36   589-701   Spermadhesin, CUB domain  
  8.37e-36   1390-1506   Spermadhesin, CUB domain  
  3.66e-35   931-1042   Spermadhesin, CUB domain  
  6.28e-35   2688-2799   Spermadhesin, CUB domain  
  1.57e-34   1625-1733   Spermadhesin, CUB domain  
  1.83e-34   3154-3279   Spermadhesin, CUB domain  
  5.5e-34   1053-1159   Spermadhesin, CUB domain  
  4.45e-33   1164-1275   Spermadhesin, CUB domain  
  2.09e-32   3401-3506   Spermadhesin, CUB domain  
  8.37e-32   2228-2335   Spermadhesin, CUB domain  
  2.88e-31   1738-1848   Spermadhesin, CUB domain  
  3.79e-31   2335-2446   Spermadhesin, CUB domain  
  5.5e-31   3036-3148   Spermadhesin, CUB domain  
  9.94e-31   1278-1387   Spermadhesin, CUB domain  
  2.49e-30   2452-2564   Spermadhesin, CUB domain  
  6.02e-30   1509-1617   Spermadhesin, CUB domain  
  1.44e-28   1987-2090   Spermadhesin, CUB domain  
  3.4e-28   2091-2212   Spermadhesin, CUB domain  
  2.22e-27   1857-1964   Spermadhesin, CUB domain  
  3.01e-27   3510-3622   Spermadhesin, CUB domain  
  3.14e-27   824-927   Spermadhesin, CUB domain  
  7.98e-27   474-585   Spermadhesin, CUB domain  
  7.2e-25   2920-3033   Spermadhesin, CUB domain  
  2.49e-23   708-815   Spermadhesin, CUB domain  
  4.32e-23   2570-2686   Spermadhesin, CUB domain  
  3.14e-21   2804-2917   Spermadhesin, CUB domain  
  1.96e-19   3286-3394   Spermadhesin, CUB domain  
ENSMUSP00000091532   1.16e-22   413-524   Spermadhesin, CUB domain  
  2.88e-20   594-700   Spermadhesin, CUB domain  
  0.000000000109   236-354   Spermadhesin, CUB domain  
ENSMUSP00000098235   1.7e-34   1587-1695   Spermadhesin, CUB domain  
  7.85e-34   888-1003   Spermadhesin, CUB domain  
  5.63e-33   241-343   Spermadhesin, CUB domain  
  3.4e-32   1938-2047   Spermadhesin, CUB domain  
  3.53e-32   725-829   Spermadhesin, CUB domain  
  1.13e-31   2110-2218   Spermadhesin, CUB domain  
  2.36e-31   2276-2395   Spermadhesin, CUB domain  
  2.22e-29   65-171   Spermadhesin, CUB domain  
  3.4e-28   1407-1523   Spermadhesin, CUB domain  
  9.68e-27   548-658   Spermadhesin, CUB domain  
  4.06e-26   2464-2568   Spermadhesin, CUB domain  
  1.09e-25   1067-1176   Spermadhesin, CUB domain  
  8.64e-25   1240-1349   Spermadhesin, CUB domain  
  9.29e-25   1755-1870   Spermadhesin, CUB domain  
ENSMUSP00000099886   1.31e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000099955   0.000000379   1299-1411   Spermadhesin, CUB domain  
  0.0000262   1194-1291   Spermadhesin, CUB domain  
ENSMUSP00000101116   0.00000102   26-69   Spermadhesin, CUB domain  
ENSMUSP00000101326   6.28e-32   26-136   Spermadhesin, CUB domain  
ENSMUSP00000101939   1.96e-19   467-577   Spermadhesin, CUB domain  
  7.85e-16   108-231   Spermadhesin, CUB domain  
  0.00000000000000144   283-399   Spermadhesin, CUB domain  
ENSMUSP00000101940   2.09e-19   527-637   Spermadhesin, CUB domain  
  8.64e-16   168-291   Spermadhesin, CUB domain  
  0.00000000000000157   343-459   Spermadhesin, CUB domain  
ENSMUSP00000101942   2.09e-19   527-637   Spermadhesin, CUB domain  
  8.5e-16   168-291   Spermadhesin, CUB domain  
  0.00000000000000157   343-459   Spermadhesin, CUB domain  
ENSMUSP00000102339   0.0000523   679-727   Spermadhesin, CUB domain  
ENSMUSP00000102340   7.46e-25   782-890   Spermadhesin, CUB domain  
ENSMUSP00000102366   4.58e-28   435-542   Spermadhesin, CUB domain  
  2.09e-21   316-420   Spermadhesin, CUB domain  
ENSMUSP00000105308   1.7e-33   79-194   Spermadhesin, CUB domain  
  3.01e-18   201-325   Spermadhesin, CUB domain  
ENSMUSP00000105934   1.7e-31   35-138   Spermadhesin, CUB domain  
  3.27e-26   240-351   Spermadhesin, CUB domain  
ENSMUSP00000109792   1.31e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000109794   1.44e-33   148-266   Spermadhesin, CUB domain  
  2.09e-33   36-142   Spermadhesin, CUB domain  
ENSMUSP00000110209   0.0000000000000131   232-351   Spermadhesin, CUB domain  
  0.0000000000366   351-461   Spermadhesin, CUB domain  
ENSMUSP00000113406   3.93e-28   43-156   Spermadhesin, CUB domain  
  0.00000000000034   251-365   Spermadhesin, CUB domain  
ENSMUSP00000114026   4.06e-28   64-177   Spermadhesin, CUB domain  
  0.000000000000353   272-386   Spermadhesin, CUB domain  
ENSMUSP00000115654   7.59e-36   18-128   Spermadhesin, CUB domain  
  1.31e-20   140-210   Spermadhesin, CUB domain  
ENSMUSP00000115660   5.89e-23   29-138   Spermadhesin, CUB domain  
  0.000000000000127   218-276   Spermadhesin, CUB domain  
ENSMUSP00000117490   2.75e-22   671-779   Spermadhesin, CUB domain  
ENSMUSP00000120749   0.00000000000000131   1-64   Spermadhesin, CUB domain  
  0.000000000000123   76-124   Spermadhesin, CUB domain  
ENSMUSP00000121575   3.66e-23   28-109   Spermadhesin, CUB domain  
  0.000000000000236   121-169   Spermadhesin, CUB domain  
ENSMUSP00000122192   3.93e-24   36-142   Spermadhesin, CUB domain  
  0.00942   1298-1401   Spermadhesin, CUB domain  
ENSMUSP00000124195   1.24e-34   747-855   Spermadhesin, CUB domain  
  5.63e-34   48-163   Spermadhesin, CUB domain  
  2.49e-32   1028-1137   Spermadhesin, CUB domain  
  8.11e-32   1200-1308   Spermadhesin, CUB domain  
  1.7e-31   1366-1485   Spermadhesin, CUB domain  
  2.49e-28   567-683   Spermadhesin, CUB domain  
  3.01e-26   1554-1658   Spermadhesin, CUB domain  
  7.85e-26   227-336   Spermadhesin, CUB domain  
  6.28e-25   400-509   Spermadhesin, CUB domain  
  0.0000000981   921-960   Spermadhesin, CUB domain  
ENSMUSP00000124456   3.4e-36   306-420   Spermadhesin, CUB domain  
  9.94e-32   150-259   Spermadhesin, CUB domain  
ENSMUSP00000124753   1.57e-34   1483-1591   Spermadhesin, CUB domain  
  7.46e-34   784-899   Spermadhesin, CUB domain  
  3.27e-33   241-343   Spermadhesin, CUB domain  
  3.27e-32   621-725   Spermadhesin, CUB domain  
  3.27e-32   1834-1943   Spermadhesin, CUB domain  
  1.06e-31   2006-2114   Spermadhesin, CUB domain  
  2.22e-31   2172-2291   Spermadhesin, CUB domain  
  2.22e-29   65-171   Spermadhesin, CUB domain  
  3.27e-28   1303-1419   Spermadhesin, CUB domain  
  9.29e-27   444-554   Spermadhesin, CUB domain  
  3.93e-26   2360-2464   Spermadhesin, CUB domain  
  1.02e-25   963-1072   Spermadhesin, CUB domain  
  8.24e-25   1136-1245   Spermadhesin, CUB domain  
  8.77e-25   1651-1766   Spermadhesin, CUB domain  
ENSMUSP00000124775   1.7e-34   1587-1695   Spermadhesin, CUB domain  
  7.85e-34   888-1003   Spermadhesin, CUB domain  
  5.63e-33   241-343   Spermadhesin, CUB domain  
  3.4e-32   1938-2047   Spermadhesin, CUB domain  
  3.53e-32   725-829   Spermadhesin, CUB domain  
  1.13e-31   2110-2218   Spermadhesin, CUB domain  
  2.36e-31   2276-2395   Spermadhesin, CUB domain  
  2.22e-29   65-171   Spermadhesin, CUB domain  
  3.4e-28   1407-1523   Spermadhesin, CUB domain  
  9.68e-27   548-658   Spermadhesin, CUB domain  
  4.06e-26   2464-2568   Spermadhesin, CUB domain  
  1.09e-25   1067-1176   Spermadhesin, CUB domain  
  8.64e-25   1240-1349   Spermadhesin, CUB domain  
  9.29e-25   1755-1870   Spermadhesin, CUB domain  
ENSMUSP00000125053   5.1e-32   150-259   Spermadhesin, CUB domain  
ENSMUSP00000125439   2.62e-31   25-135   Spermadhesin, CUB domain  
ENSMUSP00000125531   3.53e-30   25-137   Spermadhesin, CUB domain  
  1.16e-25   180-293   Spermadhesin, CUB domain  
ENSMUSP00000125712   3.53e-30   25-137   Spermadhesin, CUB domain  
  1.16e-25   180-293   Spermadhesin, CUB domain  
ENSMUSP00000125973   3.01e-37   600-710   Spermadhesin, CUB domain  
  3.14e-37   448-553   Spermadhesin, CUB domain  
  1.44e-35   761-867   Spermadhesin, CUB domain  
  2.62e-35   335-444   Spermadhesin, CUB domain  
  2.22e-28   891-984   Spermadhesin, CUB domain  
ENSMUSP00000128388   7.2e-25   60-170   Spermadhesin, CUB domain  
ENSMUSP00000130131   4.06e-24   802-910   Spermadhesin, CUB domain  
ENSMUSP00000132041   3.27e-23   247-358   Spermadhesin, CUB domain  
  0.0000000000314   70-188   Spermadhesin, CUB domain  
ENSMUSP00000138958   4.32e-35   1422-1530   Spermadhesin, CUB domain  
  4.58e-33   724-838   Spermadhesin, CUB domain  
  8.5e-32   1768-1887   Spermadhesin, CUB domain  
  2.49e-31   560-664   Spermadhesin, CUB domain  
  3.14e-31   1952-2054   Spermadhesin, CUB domain  
  8.64e-30   180-282   Spermadhesin, CUB domain  
  1.96e-28   383-493   Spermadhesin, CUB domain  
  2.88e-28   3-111   Spermadhesin, CUB domain  
  2.22e-27   1242-1363   Spermadhesin, CUB domain  
  2.36e-26   896-1017   Spermadhesin, CUB domain  
  1.09e-25   2297-2401   Spermadhesin, CUB domain  
  2.75e-25   2111-2225   Spermadhesin, CUB domain  
  2.88e-25   1075-1184   Spermadhesin, CUB domain  
  2.22e-24   1590-1705   Spermadhesin, CUB domain  
ENSMUSP00000139376   2.49e-29   22-140   Spermadhesin, CUB domain  
  6.28e-28   191-303   Spermadhesin, CUB domain  
 
Weak hits:
ENSMUSP00000035612   0.00374   43-123   Spermadhesin, CUB domain  
ENSMUSP00000068790   0.00055   1110-1192   Spermadhesin, CUB domain  
ENSMUSP00000075579   0.0202   3619-3709   Spermadhesin, CUB domain  
ENSMUSP00000116231   0.00374   43-123   Spermadhesin, CUB domain  
ENSMUSP00000119804   0.00374   43-123   Spermadhesin, CUB domain  
ENSMUSP00000130515   0.00055   1110-1192   Spermadhesin, CUB domain  
  0.0589   2669-2758   Spermadhesin, CUB domain  
ENSMUSP00000131573   0.0202   3619-3709   Spermadhesin, CUB domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   194765 194765
No Yes Homo sapiens 76_38 Human 549 207
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 156 52
No Yes Gorilla gorilla 76_3.1 Western gorilla 240 78
No Yes Pongo abelii 76_2 Sumatran orangutan 156 55
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 174 54
No Yes Papio anubis 76 Olive baboon 142 57
No Yes Macaca mulatta 76_1 Rhesus monkey 300 105
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 314 109
No Yes Otolemur garnettii 76_3 Small-eared galago 156 52
No Yes Microcebus murinus 76_1 Gray mouse lemur 125 46
No Yes Rattus norvegicus 76_5.0 Norway rat 156 61
No Yes Mus musculus 76_38 House mouse 266 89
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 133 42
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 129 54
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 157 51
No Yes Cavia porcellus 76_3 Domestic guinea pig 145 52
No Yes Oryctolagus cuniculus 76_2 Rabbit 158 53
No Yes Ochotona princeps 76 American pika 133 47
No Yes Tupaia belangeri 76 Northern tree shrew 133 47
No Yes Sus scrofa 76_10.2 Pig 157 76
No Yes Bos taurus 76_3.1 Cattle 164 61
No Yes Ovis aries 76_3.1 Sheep 205 64
No Yes Vicugna pacos 76_1 Alpaca 114 39
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 149 49
No Yes Mustela putorius furo 76_1.0 Domestic ferret 167 54
No Yes Ailuropoda melanoleuca 76_1 Giant panda 178 56
No Yes Canis familiaris 76_3.1 Dog 219 77
No Yes Felis catus 76_6.2 Domestic cat 157 53
No Yes Equus caballus 76_2 Horse 304 67
No Yes Myotis lucifugus 76_2.0 Little brown bat 132 45
No Yes Pteropus vampyrus 76_1 Large flying fox 155 53
No Yes Sorex araneus 76_1 European shrew 103 34
No Yes Erinaceus europaeus 76 Western European hedgehog 135 44
No Yes Procavia capensis 76_1 Cape rock hyrax 130 44
No Yes Loxodonta africana 76_3 African savanna elephant 182 62
No Yes Echinops telfairi 76 Small Madagascar hedgehog 130 42
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 189 68
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 101 37
No Yes Macropus eugenii 76_1.0 Tammar wallaby 131 45
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 137 60
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 152 54
No Yes Ornithorhynchus anatinus 76_5 Platypus 140 63
No Yes Saccoglossus kowalevskii v3.0   623 240
No Yes Petromyzon marinus 76_7.0 Sea lamprey 80 30
No Yes Meleagris gallopavo 76_2 Turkey 143 61
No Yes Gallus gallus 76_4 Chicken 147 49
No Yes Anas platyrhynchos 76_1.0 Mallard 150 53
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 135 51
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 147 48
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 171 60
No Yes Anolis carolinensis 76_2.0 Green anole 135 44
No Yes Xenopus laevis African clawed frog 238 98
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 219 83
No Yes Latimeria chalumnae 76_1 Coelacanth 166 71
No Yes Lepisosteus oculatus 76 Spotted gar 215 73
No Yes Gadus morhua 76_1 Atlantic cod 166 59
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 256 95
No Yes Takifugu rubripes 76_4 Torafugu 616 235
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 195 66
No Yes Oryzias latipes 76_1 Japanese medaka 164 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 179 56
No Yes Poecilia formosa 76 Amazon molly 174 60
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 243 93
No Yes Astyanax mexicanus 76 Mexican tetra 184 71
No Yes Danio rerio 76_9 Zebrafish 276 104
No Yes Oikopleura dioica   168 103
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 203 66
No Yes Ciona intestinalis 76 Vase tunicate 132 71
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 606 293
No Yes Adineta vaga   32 27
No Yes Octopus bimaculoides 280   108 50
No Yes Crassostrea gigas 22 Pacific oyster 226 128
No Yes Lottia gigantea Owl limpet 146 79
No Yes Helobdella robusta   83 43
No Yes Capitella sp. I   188 119
No Yes Danaus plexippus OGS1.0 Monarch butterfly 80 33
No Yes Heliconius melpomene Postman butterfly 31 20
No Yes Bombyx mori Domestic silkworm 46 26
No Yes Nasonia vitripennis Jewel wasp 57 22
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 213 44
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 64 22
No Yes Linepithema humile v1.1 Argentine ant 74 29
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 57 32
No Yes Solenopsis invicta v.2.2.3 Red fire ant 61 28
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 68 25
No Yes Atta cephalotes v1.1   67 31
No Yes Camponotus floridanus v3.3 Florida carpenter ant 69 25
No Yes Lucilia cuprina Australian sheep blowfly 95 28
No Yes Drosophila grimshawi 1.3   102 32
No Yes Drosophila willistoni 1.3   93 32
No Yes Drosophila pseudoobscura 2.13   96 32
No Yes Drosophila persimilis 1.3   89 31
No Yes Drosophila suzukii   129 33
No Yes Drosophila yakuba 1.3   96 31
No Yes Drosophila simulans 1.3   63 29
No Yes Drosophila sechellia 1.3   81 30
No Yes Drosophila melanogaster 76_5 Fruit fly 150 48
No Yes Drosophila erecta 1.3   95 32
No Yes Drosophila ananassae 1.3   94 32
No Yes Drosophila virilis 1.2   93 31
No Yes Drosophila mojavensis 1.3   95 33
No Yes Megaselia scalaris 22   25 17
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 109 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 75 31
No Yes Anopheles darlingi 22 American malaria mosquito 60 19
No Yes Anopheles gambiae 49_3j African malaria mosquito 65 25
No Yes Tribolium castaneum 3.0 Red flour beetle 76 29
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 24
No Yes Acyrthosiphon pisum Pea aphid 92 16
No Yes Rhodnius prolixus 22   93 39
No Yes Daphnia pulex Common water flea 170 98
No Yes Strigamia maritima 22   104 39
No Yes Sarcoptes scabiei   63 27
No Yes Tetranychus urticae Two-spotted spider mite 109 48
No Yes Ixodes scapularis (Preliminary) Black-legged tick 94 44
No Yes Pristionchus pacificus   144 115
No Yes Meloidogyne incognita Southern root-knot nematode 56 27
No Yes Meloidogyne hapla   28 14
No Yes Onchocerca volvulus 22   62 23
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 74 26
No Yes Caenorhabditis japonica   79 39
No Yes Caenorhabditis brenneri   149 99
No Yes Caenorhabditis remanei   131 84
No Yes Caenorhabditis elegans 76_235 Roundworm 143 86
No Yes Caenorhabditis briggsae 2   108 61
No Yes Trichinella spiralis 22   94 30
No Yes Hymenolepis microstoma   13 4
No Yes Echinococcus multilocularis   14 5
No Yes Echinococcus granulosus   14 5
No Yes Taenia solium Pork tapeworm 9 7
No Yes Schistosoma mansoni   18 10
No Yes Mnemiopsis leidyi Sea walnut 18 10
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   253 159
No Yes Nematostella vectensis 1.0 Starlet sea anemone 130 76
No Yes Hydra vulgaris   70 28
No Yes Amphimedon queenslandica   10 8
No Yes Trichoplax adhaerens   63 24
No Yes Proterospongia sp. ATCC 50818   6 4
No Yes Monosiga brevicollis   4 2
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   7 6
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   2 2
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Actinidia chinensis Hongyang   2 1
No Yes Amborella trichopoda 22   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella vulgaris   2 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Thecamonas trahens ATCC 50062   39 25
No Yes Bigelowiella natans CCMP2755 22   5 3
No Yes Cyanophora paradoxa   80 32
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Pythium iwayamai DAOM BR242034 22   3 3
No Yes Pythium aphanidermatum DAOM BR444 22   2 2
No Yes Pythium vexans DAOM BR484 22   3 2
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Symbiodinium minutum clade B1 v1.2   15 13
No Yes Trichomonas vaginalis   3 3
No Yes Guillardia theta CCMP2712 v1.0   20 18
No Yes Emiliania huxleyi CCMP1516   34 31
No Yes [Ruminococcus] obeum   1 1
No Yes Saprospira grandis str. Lewin   3 2
No Yes Flexibacter litoralis DSM 6794   3 1
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Fluviicola taffensis DSM 16823   4 4
No Yes Lacinutrix sp. 5H-3-7-4   2 2
No Yes Croceibacter atlanticus HTCC2559   4 2
No Yes Aequorivita sublithincola DSM 14238   2 2
No Yes Zobellia galactanivorans   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   3 3
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   4 2
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   4 3
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 244 107
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 120 38
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 73 29
No Yes Ascaris suum Victoria/Ghent Pig roundworm 61 24
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 136 80
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Nonlabens dokdonensis DSW-6   4 4
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   5 4
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 594 229
No Yes Homo sapiens (NCBI version) Human 274 99
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 162 54
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 59 22
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 55 35
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 40 15
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Homo sapiens 69_37 Human 167 55
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 156 52
No Yes Gorilla gorilla 69_3.1 Western gorilla 160 55
No Yes Pongo abelii 69_2 Sumatran orangutan 152 53
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 153 50
No Yes Macaca mulatta 69_1 Rhesus monkey 168 58
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 156 53
No Yes Otolemur garnettii 69_3 Small-eared galago 156 52
No Yes Microcebus murinus 69_1 Gray mouse lemur 125 46
No Yes Rattus norvegicus 69_3.4 Norway rat 132 51
No Yes Mus musculus 69_38 House mouse 154 53
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 133 42
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 115 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 141 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 127 51
No Yes Ochotona princeps 69 American pika 133 47
No Yes Tupaia belangeri 69 Northern tree shrew 133 47
No Yes Sus scrofa 69_10.2 Pig 126 57
No Yes Bos taurus 69_3.1 Cattle 153 55
No Yes Vicugna pacos 69_1 Alpaca 114 39
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 149 49
No Yes Mustela putorius furo 69_1.0 Domestic ferret 153 52
No Yes Ailuropoda melanoleuca 69_1 Giant panda 138 49
No Yes Canis familiaris 69_3.1 Dog 156 53
No Yes Felis catus 69 Domestic cat 112 42
No Yes Equus caballus 69_2 Horse 151 48
No Yes Myotis lucifugus 69_2.0 Little brown bat 131 44
No Yes Pteropus vampyrus 69_1 Large flying fox 155 53
No Yes Sorex araneus 69_1 European shrew 103 34
No Yes Erinaceus europaeus 69 Western European hedgehog 135 44
No Yes Procavia capensis 69_1 Cape rock hyrax 130 44
No Yes Loxodonta africana 69_3 African savanna elephant 140 47
No Yes Echinops telfairi 69 Small Madagascar hedgehog 130 42
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 115 47
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 101 37
No Yes Macropus eugenii 69_1.0 Tammar wallaby 131 45
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 121 49
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 151 53
No Yes Ornithorhynchus anatinus 69_5 Platypus 136 61
No Yes Petromyzon marinus 69_7.0 Sea lamprey 79 29
No Yes Meleagris gallopavo 69_2 Turkey 118 50
No Yes Gallus gallus 69_2 Chicken 137 45
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 131 48
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 146 50
No Yes Anolis carolinensis 69_2.0 Green anole 131 44
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 191 68
No Yes Latimeria chalumnae 69_1 Coelacanth 144 62
No Yes Gadus morhua 69_1 Atlantic cod 165 58
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 176 70
No Yes Takifugu rubripes 69_4 Torafugu 154 61
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 175 57
No Yes Oryzias latipes 69_1 Japanese medaka 137 46
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 179 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 194 63
No Yes Danio rerio 69_9 Zebrafish 164 69
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 91 36
No Yes Ciona intestinalis 69 Vase tunicate 131 70
No Yes Drosophila melanogaster 69_5 Fruit fly 98 29
No Yes Caenorhabditis elegans 69_215 Roundworm 121 70
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   6 6
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   8 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   81204 31567
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   4 4
No Yes Protozoadb 2010_08 (Protozoadb)   9 9
No Yes Sludge/US, Phrap Assembly (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   6977 2935
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   58517 26023
No Yes Global Ocean Sampling Expedition (GOS)   118 110
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   8 7
No Yes Protein Data Bank (all PDB sequenc)   106 66
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   174 174
No Yes TargetDB (Targets)   125 63
No Yes UniProt viral sequences (Viral)   3 3

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.