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  Home > Genomes > Lepisosteus oculatus 76 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Lepisosteus oculatus 76

Assignment details

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Lepisosteus oculatus 76 has 469 significant domains in 417 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSLOCP00000000046   0.00000000000095   10-79   RING finger domain, C3HC4  
ENSLOCP00000000047   0.000000000000928   10-79   RING finger domain, C3HC4  
ENSLOCP00000000049   0.000000000000817   10-79   RING finger domain, C3HC4  
ENSLOCP00000000111   0.0000000000000303   704-760   RING finger domain, C3HC4  
ENSLOCP00000000308   0.000000000261   6-75   RING finger domain, C3HC4  
ENSLOCP00000000310   2.21e-23   5-78   RING finger domain, C3HC4  
ENSLOCP00000000498   0.0000000000000068   231-302   RING finger domain, C3HC4  
ENSLOCP00000000523   0.000000777   53-118   RING finger domain, C3HC4  
ENSLOCP00000000547   0.000000000000179   101-147   RING finger domain, C3HC4  
ENSLOCP00000000688   0.00000000000000883   37-95   RING finger domain, C3HC4  
ENSLOCP00000000725   2.08e-17   9-81   RING finger domain, C3HC4  
ENSLOCP00000000760   0.00000000000000149   33-98   RING finger domain, C3HC4  
ENSLOCP00000000821   2.03e-20   8-82   RING finger domain, C3HC4  
ENSLOCP00000000890   0.000000000424   29-80   RING finger domain, C3HC4  
ENSLOCP00000000941   0.00000000221   26-75   RING finger domain, C3HC4  
ENSLOCP00000001019   0.00000101   293-338   RING finger domain, C3HC4  
ENSLOCP00000001043   1.04e-18   7-81   RING finger domain, C3HC4  
ENSLOCP00000001240   0.00000000000000404   117-198   RING finger domain, C3HC4  
  0.000000000000389   284-339   RING finger domain, C3HC4  
  0.0000000000484   190-258   IBR domain  
ENSLOCP00000001262   3.76e-20   57-129   RING finger domain, C3HC4  
ENSLOCP00000001320   8.25e-19   4-78   RING finger domain, C3HC4  
ENSLOCP00000001425   0.000000381   55-107   RING finger domain, C3HC4  
ENSLOCP00000001450   1.04e-24   271-353   RING finger domain, C3HC4  
ENSLOCP00000001502   1.61e-19   10-79   RING finger domain, C3HC4  
ENSLOCP00000001503   5.61e-17   9-81   RING finger domain, C3HC4  
ENSLOCP00000001521   6.83e-34   177-285   Zf-UBP  
  0.0542   31-87   Zf-UBP  
ENSLOCP00000001522   0.000000000000303   7-75   RING finger domain, C3HC4  
ENSLOCP00000001546   0.000000000000278   7-75   RING finger domain, C3HC4  
ENSLOCP00000001562   2.39e-17   2-74   RING finger domain, C3HC4  
ENSLOCP00000001579   8.43e-18   3-76   RING finger domain, C3HC4  
ENSLOCP00000001605   8.43e-18   8-81   RING finger domain, C3HC4  
ENSLOCP00000001624   0.00000000151   27-74   RING finger domain, C3HC4  
ENSLOCP00000001672   3.76e-21   145-209   RING finger domain, C3HC4  
ENSLOCP00000001698   0.0000000000000133   231-284   RING finger domain, C3HC4  
ENSLOCP00000001934   4.37e-20   519-582   RING finger domain, C3HC4  
ENSLOCP00000002061   2.52e-20   222-290   RING finger domain, C3HC4  
ENSLOCP00000002082   0.00000000324   300-351   RING finger domain, C3HC4  
ENSLOCP00000002095   4.24e-18   70-145   RING finger domain, C3HC4  
ENSLOCP00000002132   0.0000000383   947-1007   RING finger domain, C3HC4  
  0.0000269   65-133   ZZ domain  
  0.00459   819-861   RING finger domain, C3HC4  
  0.0169   865-910   RING finger domain, C3HC4  
ENSLOCP00000002154   0.0000000324   816-876   RING finger domain, C3HC4  
  0.00453   688-730   RING finger domain, C3HC4  
  0.0141   734-779   RING finger domain, C3HC4  
ENSLOCP00000002195   0.0000000000353   172-215   RING finger domain, C3HC4  
ENSLOCP00000002203   0.000000736   59-125   RING finger domain, C3HC4  
ENSLOCP00000002207   0.00000000000000884   39-107   RING finger domain, C3HC4  
ENSLOCP00000002304   0.0000000000000033   5-110   Zf-UBP  
ENSLOCP00000002312   0.00000000000000318   4-109   Zf-UBP  
ENSLOCP00000002320   0.0000000000477   38-94   U-box  
ENSLOCP00000002332   0.00000000000000294   10-115   Zf-UBP  
ENSLOCP00000002386   0.000000864   284-346   RING finger domain, C3HC4  
ENSLOCP00000002393   0.0000000000000106   4-58   RING finger domain, C3HC4  
ENSLOCP00000002411   5.81e-16   10-82   RING finger domain, C3HC4  
ENSLOCP00000002423   5.81e-16   7-79   RING finger domain, C3HC4  
ENSLOCP00000002613   6.1e-18   397-501   RING finger domain, C3HC4  
ENSLOCP00000002621   0.000000000000025   33-81   RING finger domain, C3HC4  
ENSLOCP00000002696   1.18e-17   23-90   RING finger domain, C3HC4  
ENSLOCP00000002716   7.07e-18   14-81   RING finger domain, C3HC4  
ENSLOCP00000002721   3.53e-18   123-194   RING finger domain, C3HC4  
ENSLOCP00000002731   0.000000000000259   4-65   RING finger domain, C3HC4  
ENSLOCP00000002739   3.31e-18   51-122   RING finger domain, C3HC4  
ENSLOCP00000002750   3.74e-20   10-79   RING finger domain, C3HC4  
ENSLOCP00000002770   2.43e-21   13-82   RING finger domain, C3HC4  
ENSLOCP00000002774   5.55e-16   47-113   RING finger domain, C3HC4  
ENSLOCP00000002802   2.65e-19   10-79   RING finger domain, C3HC4  
ENSLOCP00000002855   0.000000000000013   18-82   RING finger domain, C3HC4  
ENSLOCP00000002878   0.00000000000000278   11-67   RING finger domain, C3HC4  
ENSLOCP00000002884   4.32e-19   72-138   RING finger domain, C3HC4  
ENSLOCP00000002983   0.000000135   578-625   RING finger domain, C3HC4  
ENSLOCP00000003129   0.00000000000318   1853-1914   ZZ domain  
  0.000000000483   1811-1862   ZZ domain  
ENSLOCP00000003173   0.0000000000000108   297-349   RING finger domain, C3HC4  
ENSLOCP00000003190   0.00000000000306   1716-1763   ZZ domain  
ENSLOCP00000003209   0.00000000000294   1701-1748   ZZ domain  
ENSLOCP00000003253   0.00000000167   553-606   RING finger domain, C3HC4  
ENSLOCP00000003267   0.00000000156   518-571   RING finger domain, C3HC4  
ENSLOCP00000003407   0.000000000565   8-58   RING finger domain, C3HC4  
ENSLOCP00000003431   1.13e-19   10-80   RING finger domain, C3HC4  
ENSLOCP00000003452   9.72e-20   12-82   RING finger domain, C3HC4  
ENSLOCP00000003460   0.0000000000113   209-274   RING finger domain, C3HC4  
ENSLOCP00000003560   5.42e-19   160-212   RING finger domain, C3HC4  
ENSLOCP00000003664   1.3e-17   8-79   RING finger domain, C3HC4  
ENSLOCP00000003704   1.25e-20   268-318   RING finger domain, C3HC4  
ENSLOCP00000003784   0.0000000000000278   10-79   RING finger domain, C3HC4  
ENSLOCP00000003838   4.8e-18   77-136   RING finger domain, C3HC4  
ENSLOCP00000003888   0.0000000000106   241-306   RING finger domain, C3HC4  
ENSLOCP00000003900   0.0000000000104   237-302   RING finger domain, C3HC4  
ENSLOCP00000003940   0.0000000000212   168-211   RING finger domain, C3HC4  
ENSLOCP00000003995   6.85e-43   340-418   RING finger domain, C3HC4  
ENSLOCP00000004069   0.000000418   386-440   RING finger domain, C3HC4  
ENSLOCP00000004183   0.0000000000000395   375-434   RING finger domain, C3HC4  
ENSLOCP00000004213   1.19e-18   18-87   RING finger domain, C3HC4  
ENSLOCP00000004265   0.000000147   215-260   RING finger domain, C3HC4  
  0.0000129   124-186   RING finger domain, C3HC4  
ENSLOCP00000004288   0.000000131   195-240   RING finger domain, C3HC4  
  0.0000115   104-166   RING finger domain, C3HC4  
ENSLOCP00000004301   0.00000000000000596   2-88   RING finger domain, C3HC4  
ENSLOCP00000004348   0.0000000000000188   790-852   ZZ domain  
ENSLOCP00000004350   2.5e-20   10-80   RING finger domain, C3HC4  
ENSLOCP00000004382   3.06e-22   9-93   Zf-UBP  
ENSLOCP00000004401   3.3e-22   41-125   Zf-UBP  
ENSLOCP00000004498   4.42e-16   430-495   RING finger domain, C3HC4  
ENSLOCP00000004527   1.04e-17   364-416   RING finger domain, C3HC4  
ENSLOCP00000004534   1.02e-16   167-215   RING finger domain, C3HC4  
ENSLOCP00000004544   1.02e-17   356-408   RING finger domain, C3HC4  
ENSLOCP00000004674   0.00000000000000148   100-155   Variant RING domain  
ENSLOCP00000004771   1.85e-28   985-1071   U-box  
ENSLOCP00000004788   1.85e-28   985-1071   U-box  
ENSLOCP00000004806   5.3e-23   8-91   Zf-UBP  
ENSLOCP00000005046   0.000000000000229   42-97   RING finger domain, C3HC4  
ENSLOCP00000005106   0.0000000022   73-156   RING finger domain, C3HC4  
ENSLOCP00000005344   4.04e-33   30-119   RING finger domain, C3HC4  
ENSLOCP00000005346   5.89e-16   59-114   Variant RING domain  
ENSLOCP00000005440   1e-20   3-90   RING finger domain, C3HC4  
ENSLOCP00000005508   0.00000000000275   16-64   RING finger domain, C3HC4  
ENSLOCP00000005591   0.000000000247   694-748   RING finger domain, C3HC4  
  0.00000053   626-685   IBR domain  
  0.0000971   541-623   RING finger domain, C3HC4  
ENSLOCP00000005607   0.00000000023   664-718   RING finger domain, C3HC4  
  0.000000503   596-655   IBR domain  
  0.0000883   511-593   RING finger domain, C3HC4  
ENSLOCP00000005614   0.0000000000000012   26-75   RING finger domain, C3HC4  
ENSLOCP00000005675   0.000000000000162   15-106   RING finger domain, C3HC4  
ENSLOCP00000005699   0.000000000000202   15-106   RING finger domain, C3HC4  
ENSLOCP00000005743   0.000000000000454   16-109   RING finger domain, C3HC4  
ENSLOCP00000005763   0.000000000000454   16-109   RING finger domain, C3HC4  
ENSLOCP00000005774   1.12e-17   29-87   RING finger domain, C3HC4  
ENSLOCP00000005829   2.08e-16   34-99   RING finger domain, C3HC4  
ENSLOCP00000005854   1.48e-16   34-100   RING finger domain, C3HC4  
ENSLOCP00000005890   0.000000000167   23-68   RING finger domain, C3HC4  
ENSLOCP00000005944   0.000000000000141   23-113   RING finger domain, C3HC4  
ENSLOCP00000005996   0.00000000000000184   1861-1913   RING finger domain, C3HC4  
ENSLOCP00000006119   0.000000383   325-371   RING finger domain, C3HC4  
ENSLOCP00000006211   5.96e-24   192-259   RING finger domain, C3HC4  
ENSLOCP00000006245   9.12e-43   349-426   RING finger domain, C3HC4  
ENSLOCP00000006326   0.00000000000000565   30-113   RING finger domain, C3HC4  
ENSLOCP00000006341   0.00000000000000606   30-113   RING finger domain, C3HC4  
ENSLOCP00000006469   0.000000000000589   3-61   RING finger domain, C3HC4  
ENSLOCP00000006619   1.01e-20   241-329   RING finger domain, C3HC4  
ENSLOCP00000006639   9.9e-21   240-328   RING finger domain, C3HC4  
ENSLOCP00000006805   0.00000000000000619   272-317   RING finger domain, C3HC4  
ENSLOCP00000006888   0.000000000848   821-862   RING finger domain, C3HC4  
ENSLOCP00000006903   0.0000000000303   125-195   RING finger domain, C3HC4  
ENSLOCP00000006963   0.000000412   84-162   RING finger domain, C3HC4  
ENSLOCP00000007089   0.00000000000000915   9-82   RING finger domain, C3HC4  
ENSLOCP00000007111   0.000002   16-64   ZZ domain  
ENSLOCP00000007185   0.00000000795   364-419   RING finger domain, C3HC4  
ENSLOCP00000007244   0.0000000606   299-343   RING finger domain, C3HC4  
ENSLOCP00000007253   1.77e-24   430-501   U-box  
ENSLOCP00000007314   0.00000000000000683   589-654   Variant RING domain  
ENSLOCP00000007357   0.0000000106   4493-4568   RING finger domain, C3HC4  
ENSLOCP00000007375   0.0000000102   4318-4393   RING finger domain, C3HC4  
ENSLOCP00000007435   1.04e-20   219-297   ZZ domain  
ENSLOCP00000007450   1.04e-20   225-303   ZZ domain  
ENSLOCP00000007625   2.55e-23   113-190   ZZ domain  
  0.00000152   943-997   RING finger domain, C3HC4  
  0.00707   876-918   RING finger domain, C3HC4  
ENSLOCP00000007747   0.00000144   37-82   RING finger domain, C3HC4  
ENSLOCP00000007776   0.000000000000448   18-67   RING finger domain, C3HC4  
ENSLOCP00000007794   0.000000000000518   16-65   RING finger domain, C3HC4  
  0.0261   87-147   Zf-UBP  
ENSLOCP00000007815   0.00000000053   2-42   RING finger domain, C3HC4  
ENSLOCP00000007923   1.15e-20   7-79   RING finger domain, C3HC4  
ENSLOCP00000007942   5.08e-21   7-79   RING finger domain, C3HC4  
ENSLOCP00000008007   3.53e-22   8-80   RING finger domain, C3HC4  
ENSLOCP00000008042   0.000000000469   417-467   RING finger domain, C3HC4  
  0.00000000552   269-313   RING finger domain, C3HC4  
ENSLOCP00000008152   4.86e-23   1097-1180   U-box  
ENSLOCP00000008170   5.83e-23   1273-1356   U-box  
ENSLOCP00000008216   2.52e-16   157-220   RING finger domain, C3HC4  
ENSLOCP00000008302   1.41e-16   11-80   RING finger domain, C3HC4  
ENSLOCP00000008406   2.65e-21   318-384   RING finger domain, C3HC4  
ENSLOCP00000008411   3.03e-18   123-175   RING finger domain, C3HC4  
ENSLOCP00000008420   2.43e-21   318-384   RING finger domain, C3HC4  
ENSLOCP00000008610   0.0000000000000188   12-76   Variant RING domain  
ENSLOCP00000008628   1.9e-19   359-463   RING finger domain, C3HC4  
ENSLOCP00000008712   8.62e-19   10-79   RING finger domain, C3HC4  
ENSLOCP00000008729   8.84e-19   10-79   RING finger domain, C3HC4  
ENSLOCP00000008835   5.81e-16   17-104   RING finger domain, C3HC4  
  0.00212   131-178   ZZ domain  
ENSLOCP00000008910   1.55e-17   185-247   RING finger domain, C3HC4  
ENSLOCP00000008924   0.0000000000000121   39-95   RING finger domain, C3HC4  
ENSLOCP00000009093   1.31e-18   297-360   RING finger domain, C3HC4  
ENSLOCP00000009141   0.00000278   83-145   RING finger domain, C3HC4  
ENSLOCP00000009143   0.0000471   38-90   RING finger domain, C3HC4  
ENSLOCP00000009257   0.000000000000924   275-325   RING finger domain, C3HC4  
ENSLOCP00000009276   0.00000000000000255   761-816   RING finger domain, C3HC4  
ENSLOCP00000009292   0.00000000000000619   746-802   RING finger domain, C3HC4  
ENSLOCP00000009371   0.00000913   520-570   RING finger domain, C3HC4  
ENSLOCP00000009499   8.12e-35   174-285   Zf-UBP  
ENSLOCP00000009583   0.0000000000000151   218-289   RING finger domain, C3HC4  
ENSLOCP00000009585   0.0000433   444-497   RING finger domain, C3HC4  
ENSLOCP00000009586   0.00000000000353   417-468   RING finger domain, C3HC4  
ENSLOCP00000009604   0.0000000000424   267-313   RING finger domain, C3HC4  
ENSLOCP00000009637   0.00000000000000695   309-364   Variant RING domain  
ENSLOCP00000009793   5.01e-34   28-110   RING finger domain, C3HC4  
ENSLOCP00000009922   5.46e-20   397-500   RING finger domain, C3HC4  
ENSLOCP00000010020   4.12e-20   2688-2759   ZZ domain  
ENSLOCP00000010096   0.0000162   385-435   RING finger domain, C3HC4  
ENSLOCP00000010109   1.39e-21   82-151   RING finger domain, C3HC4  
ENSLOCP00000010275   0.0000000000000124   215-286   RING finger domain, C3HC4  
ENSLOCP00000010288   0.0000000000000243   219-285   RING finger domain, C3HC4  
ENSLOCP00000010337   0.00000000000000388   66-120   Variant RING domain  
ENSLOCP00000010342   0.00000000000000994   25-94   RING finger domain, C3HC4  
ENSLOCP00000010504   0.0000000000000839   26-73   RING finger domain, C3HC4  
ENSLOCP00000010571   1.41e-17   211-289   ZZ domain  
  0.00000000000000278   322-384   RING finger domain, C3HC4  
  0.00000000474   137-204   RING finger domain, C3HC4  
ENSLOCP00000010652   5.41e-19   15-87   RING finger domain, C3HC4  
ENSLOCP00000010665   5.52e-19   1-69   RING finger domain, C3HC4  
ENSLOCP00000010674   2.95e-19   7-79   RING finger domain, C3HC4  
ENSLOCP00000010688   3.09e-18   5-76   RING finger domain, C3HC4  
ENSLOCP00000010775   0.000000172   435-488   RING finger domain, C3HC4  
ENSLOCP00000010805   2.29e-22   3-89   RING finger domain, C3HC4  
ENSLOCP00000010858   0.0000000000883   549-615   IBR domain  
  0.000000000609   631-693   RING finger domain, C3HC4  
  0.00000000707   474-552   RING finger domain, C3HC4  
ENSLOCP00000010869   0.0000000000883   546-612   IBR domain  
  0.000000000406   628-690   RING finger domain, C3HC4  
  0.00000000742   471-549   RING finger domain, C3HC4  
ENSLOCP00000010875   0.00000000000574   51-102   RING finger domain, C3HC4  
ENSLOCP00000010886   0.00000000000754   17-70   RING finger domain, C3HC4  
ENSLOCP00000010895   0.00000000000377   17-70   RING finger domain, C3HC4  
ENSLOCP00000010936   0.000000000000175   2-61   RING finger domain, C3HC4  
ENSLOCP00000010942   0.00000000193   16-55,110-144   RING finger domain, C3HC4  
  0.0339   145-197   ZZ domain  
ENSLOCP00000010958   9.72e-17   1-69   RING finger domain, C3HC4  
  0.00000000000000181   313-385   RING finger domain, C3HC4  
ENSLOCP00000010969   8.94e-16   6-78   RING finger domain, C3HC4  
ENSLOCP00000010971   0.0000000117   1727-1778   RING finger domain, C3HC4  
ENSLOCP00000010972   3.33e-18   525-596   RING finger domain, C3HC4  
ENSLOCP00000010980   0.0000000113   1719-1770   RING finger domain, C3HC4  
ENSLOCP00000011000   8.39e-21   11-83   RING finger domain, C3HC4  
ENSLOCP00000011007   1.41e-19   23-134   Zf-UBP  
ENSLOCP00000011008   6.62e-25   172-251   U-box  
ENSLOCP00000011062   3.53e-21   260-321   RING finger domain, C3HC4  
ENSLOCP00000011072   4.08e-19   260-322   RING finger domain, C3HC4  
ENSLOCP00000011300   1.04e-17   2-82   RING finger domain, C3HC4  
ENSLOCP00000011338   7.07e-20   520-583   RING finger domain, C3HC4  
ENSLOCP00000011433   0.0000000000000777   25-107   RING finger domain, C3HC4  
  0.00000000003   185-225   RING finger domain, C3HC4  
  0.000000023   100-164   IBR domain  
ENSLOCP00000011449   7.65e-16   276-332   Variant RING domain  
ENSLOCP00000011457   7.65e-16   276-332   Variant RING domain  
ENSLOCP00000011465   4.41e-16   77-133   Variant RING domain  
ENSLOCP00000011477   8.24e-16   297-353   Variant RING domain  
ENSLOCP00000011493   1.28e-19   101-147   RING finger domain, C3HC4  
ENSLOCP00000011506   1.39e-19   98-144   RING finger domain, C3HC4  
ENSLOCP00000011738   0.0000424   1243-1277   RING finger domain, C3HC4  
ENSLOCP00000011741   0.000000000000095   10-77   RING finger domain, C3HC4  
ENSLOCP00000011750   0.0000424   1231-1265   RING finger domain, C3HC4  
ENSLOCP00000011795   0.0000000000000023   161-216   Variant RING domain  
ENSLOCP00000011850   2.8e-16   158-239   RING finger domain, C3HC4  
  0.00000000000061   326-381   RING finger domain, C3HC4  
  0.00000000000136   230-298   IBR domain  
ENSLOCP00000011985   0.00000000000000175   14-62   RING finger domain, C3HC4  
ENSLOCP00000011995   1.24e-21   9-83   RING finger domain, C3HC4  
ENSLOCP00000012007   1.26e-21   9-83   RING finger domain, C3HC4  
ENSLOCP00000012008   3.77e-18   290-338   RING finger domain, C3HC4  
  0.000000000022   2-66   RING finger domain, C3HC4  
ENSLOCP00000012015   0.0000000000652   53-124   RING finger domain, C3HC4  
ENSLOCP00000012113   3.76e-20   9-80   RING finger domain, C3HC4  
ENSLOCP00000012127   0.00000000000000331   11-81   RING finger domain, C3HC4  
ENSLOCP00000012134   1.56e-17   13-84   RING finger domain, C3HC4  
ENSLOCP00000012270   0.00000000706   146-216   RING finger domain, C3HC4  
ENSLOCP00000012277   0.00000000839   171-241   RING finger domain, C3HC4  
ENSLOCP00000012298   0.00000000000303   766-836   RING finger domain, C3HC4  
ENSLOCP00000012347   2.5e-16   9-69   RING finger domain, C3HC4  
ENSLOCP00000012372   0.0000000018   2-62   RING finger domain, C3HC4  
ENSLOCP00000012457   0.00000033   28-73   ZZ domain  
ENSLOCP00000012540   2.94e-21   3306-3394   ZZ domain  
ENSLOCP00000012554   2.94e-21   3296-3384   ZZ domain  
ENSLOCP00000012626   0.00000000000000769   9-64   RING finger domain, C3HC4  
ENSLOCP00000012800   2.17e-18   608-675   RING finger domain, C3HC4  
ENSLOCP00000012853   0.0000000138   114-179   RING finger domain, C3HC4  
ENSLOCP00000012960   1.49e-18   202-288   RING finger domain, C3HC4  
  3.35e-16   377-435   RING finger domain, C3HC4  
  0.00000000000706   277-339   IBR domain  
ENSLOCP00000012971   0.000000000197   35-87   RING finger domain, C3HC4  
ENSLOCP00000013000   0.0000618   137-163   RING finger domain, C3HC4  
ENSLOCP00000013018   6.63e-16   18-89   RING finger domain, C3HC4  
ENSLOCP00000013022   0.000000000162   148-199   RING finger domain, C3HC4  
ENSLOCP00000013026   7.51e-16   18-88   RING finger domain, C3HC4  
ENSLOCP00000013032   1.66e-20   328-412   RING finger domain, C3HC4  
  2.5e-16   512-561   RING finger domain, C3HC4  
  0.000011   404-486   RING finger domain, C3HC4  
ENSLOCP00000013040   1.61e-20   328-412   RING finger domain, C3HC4  
  2.5e-16   512-561   RING finger domain, C3HC4  
  0.0000106   404-486   RING finger domain, C3HC4  
ENSLOCP00000013167   3.98e-20   8-79   RING finger domain, C3HC4  
ENSLOCP00000013196   0.0000000565   27-67   RING finger domain, C3HC4  
ENSLOCP00000013219   0.00000000000000789   204-282   ZZ domain  
ENSLOCP00000013228   0.0000000501   375-430   RING finger domain, C3HC4  
ENSLOCP00000013232   0.00000000000000777   204-282   ZZ domain  
ENSLOCP00000013237   0.00000000000000636   612-663   RING finger domain, C3HC4  
ENSLOCP00000013293   0.0000000000000287   6-56   RING finger domain, C3HC4  
ENSLOCP00000013416   0.00000353   3-53   RING finger domain, C3HC4  
ENSLOCP00000013427   0.00000000765   446-509   RING finger domain, C3HC4  
ENSLOCP00000013470   0.000000418   343-402   U-box  
ENSLOCP00000013636   0.0000000033   32-100   RING finger domain, C3HC4  
ENSLOCP00000013646   0.00000000283   32-100   RING finger domain, C3HC4  
ENSLOCP00000013736   0.000000272   8-57   RING finger domain, C3HC4  
ENSLOCP00000013737   1.26e-20   287-342   RING finger domain, C3HC4  
ENSLOCP00000013778   0.0000000439   317-384   RING finger domain, C3HC4  
ENSLOCP00000013784   0.0000000000145   277-327   RING finger domain, C3HC4  
ENSLOCP00000013787   0.0000000298   98-165   RING finger domain, C3HC4  
ENSLOCP00000013901   1.65e-16   4-63   ZZ domain  
ENSLOCP00000014007   2.08e-32   4-103   RING finger domain, C3HC4  
ENSLOCP00000014082   9.06e-20   121-182   ZZ domain  
ENSLOCP00000014100   0.00000777   1257-1314   RING finger domain, C3HC4  
ENSLOCP00000014112   2.25e-19   262-324   RING finger domain, C3HC4  
ENSLOCP00000014115   0.00000883   1232-1288   RING finger domain, C3HC4  
ENSLOCP00000014165   0.00000000854   7-66   RING finger domain, C3HC4  
ENSLOCP00000014203   0.00000000000471   1637-1683   ZZ domain  
ENSLOCP00000014219   1.24e-16   6-81   RING finger domain, C3HC4  
ENSLOCP00000014225   1.11e-16   6-81   RING finger domain, C3HC4  
ENSLOCP00000014287   9.42e-18   13-79   RING finger domain, C3HC4  
ENSLOCP00000014495   0.000000000000205   97-147   RING finger domain, C3HC4  
ENSLOCP00000014501   0.0000000000128   249-292   RING finger domain, C3HC4  
ENSLOCP00000014514   0.000000000013   249-292   RING finger domain, C3HC4  
ENSLOCP00000014518   0.000000000000894   16-71   RING finger domain, C3HC4  
ENSLOCP00000014550   8.73e-19   91-139   RING finger domain, C3HC4  
ENSLOCP00000014609   1.44e-20   371-437   RING finger domain, C3HC4  
ENSLOCP00000014711   0.00000000118   2-41,130-165   RING finger domain, C3HC4  
ENSLOCP00000014717   0.00000000913   516-564   RING finger domain, C3HC4  
ENSLOCP00000014726   0.00000000883   500-548   RING finger domain, C3HC4  
ENSLOCP00000014750   5.52e-20   8-79   RING finger domain, C3HC4  
ENSLOCP00000014756   3.53e-19   5-72   RING finger domain, C3HC4  
ENSLOCP00000014805   0.00000000565   465-515   RING finger domain, C3HC4  
ENSLOCP00000014916   0.000000323   282-324   RING finger domain, C3HC4  
ENSLOCP00000014938   0.0000000972   332-389   RING finger domain, C3HC4  
ENSLOCP00000014963   9.59e-16   6-77   RING finger domain, C3HC4  
ENSLOCP00000014973   0.0000000247   219-271   ZZ domain  
ENSLOCP00000014978   0.0000000000000025   10-57   RING finger domain, C3HC4  
ENSLOCP00000014986   0.000000000000229   18-74   RING finger domain, C3HC4  
ENSLOCP00000015013   0.0000000000000104   314-382   IBR domain  
  0.000000226   226-282   RING finger domain, C3HC4  
  0.00000547   394-446   RING finger domain, C3HC4  
ENSLOCP00000015020   0.00000000000000636   308-376   IBR domain  
  0.000000165   220-276   RING finger domain, C3HC4  
  0.00000512   390-443   RING finger domain, C3HC4  
ENSLOCP00000015165   0.0000959   857-889   RING finger domain, C3HC4  
ENSLOCP00000015363   0.0000000000000238   129-183   RING finger domain, C3HC4  
  0.0000000000908   290-370   RING finger domain, C3HC4  
ENSLOCP00000015370   0.000000000166   151-200   RING finger domain, C3HC4  
ENSLOCP00000015374   0.000000000144   131-181   RING finger domain, C3HC4  
ENSLOCP00000015405   0.000000000000457   4133-4179   RING finger domain, C3HC4  
ENSLOCP00000015418   0.000000000000437   4001-4047   RING finger domain, C3HC4  
ENSLOCP00000015564   0.0000000000000388   105-158   Variant RING domain  
ENSLOCP00000015568   8.59e-28   2-95   Zf-UBP  
ENSLOCP00000015584   4.24e-18   9-81   RING finger domain, C3HC4  
ENSLOCP00000015589   0.00000000000934   10-78   RING finger domain, C3HC4  
ENSLOCP00000015594   0.00000000000909   10-78   RING finger domain, C3HC4  
ENSLOCP00000015609   6.31e-18   7-79   RING finger domain, C3HC4  
ENSLOCP00000015768   5.05e-20   323-389   RING finger domain, C3HC4  
ENSLOCP00000015827   0.00000000066   494-541   RING finger domain, C3HC4  
ENSLOCP00000015853   0.0000000848   538-587   RING finger domain, C3HC4  
ENSLOCP00000015873   0.0000000000000424   52-105   Variant RING domain  
ENSLOCP00000016002   0.00000000000331   4080-4127   RING finger domain, C3HC4  
ENSLOCP00000016012   0.00000000000243   2915-2962   RING finger domain, C3HC4  
ENSLOCP00000016164   0.00000000000242   9-65   RING finger domain, C3HC4  
ENSLOCP00000016216   0.0000000191   4-74   RING finger domain, C3HC4  
ENSLOCP00000016366   0.0000000212   155-195   RING finger domain, C3HC4  
  0.0106   63-119   RING finger domain, C3HC4  
  0.0977   2-42   RING finger domain, C3HC4  
ENSLOCP00000016486   0.00000000245   1244-1296   RING finger domain, C3HC4  
ENSLOCP00000016614   0.00000000265   250-301   RING finger domain, C3HC4  
ENSLOCP00000016692   0.00000000000000434   7-62   Variant RING domain  
ENSLOCP00000016810   8.33e-20   218-284   RING finger domain, C3HC4  
ENSLOCP00000016818   4.29e-20   574-622   RING finger domain, C3HC4  
ENSLOCP00000016827   2.43e-19   932-980   RING finger domain, C3HC4  
ENSLOCP00000016875   0.000000000000291   14-68   RING finger domain, C3HC4  
ENSLOCP00000016970   0.0000000000000424   9-86   RING finger domain, C3HC4  
ENSLOCP00000017055   6.86e-19   9-84   RING finger domain, C3HC4  
ENSLOCP00000017168   0.000000000000328   2-90   RING finger domain, C3HC4  
  0.000953   113-165   ZZ domain  
ENSLOCP00000017221   0.0000000000259   227-294   RING finger domain, C3HC4  
ENSLOCP00000017251   0.00000000000000198   406-453   RING finger domain, C3HC4  
  0.0000000000303   71-138   RING finger domain, C3HC4  
ENSLOCP00000017322   0.0000000000000233   2-84   RING finger domain, C3HC4  
ENSLOCP00000017417   0.00000000000000613   29-93   RING finger domain, C3HC4  
ENSLOCP00000017430   0.0000000000000408   10-65   RING finger domain, C3HC4  
ENSLOCP00000017432   0.0000000000000408   10-65   RING finger domain, C3HC4  
ENSLOCP00000017699   7.51e-19   6-79   RING finger domain, C3HC4  
ENSLOCP00000017730   2.19e-18   292-348   RING finger domain, C3HC4  
  0.00000000000000234   140-224   RING finger domain, C3HC4  
  0.00000141   211-280   IBR domain  
ENSLOCP00000017972   1.66e-19   12-83   RING finger domain, C3HC4  
ENSLOCP00000018195   4.8e-20   257-312   RING finger domain, C3HC4  
ENSLOCP00000018225   4.78e-17   435-482   RING finger domain, C3HC4  
  0.0000000000017   106-174   RING finger domain, C3HC4  
ENSLOCP00000018317   1.05e-19   1-117   Zf-UBP  
ENSLOCP00000018389   0.0000000000108   10-73   RING finger domain, C3HC4  
ENSLOCP00000018391   0.0000000000101   10-73   RING finger domain, C3HC4  
ENSLOCP00000018396   0.00000147   49-110   RING finger domain, C3HC4  
ENSLOCP00000018432   1.7e-21   306-364   RING finger domain, C3HC4  
  1.63e-16   152-235   RING finger domain, C3HC4  
  0.0000000006   227-294   IBR domain  
ENSLOCP00000018524   0.0000000000029   8-71   Variant RING domain  
ENSLOCP00000018630   4.99e-19   86-134   RING finger domain, C3HC4  
ENSLOCP00000018724   2.59e-22   37-131   Zf-UBP  
ENSLOCP00000018737   0.0000000000000179   38-110   RING finger domain, C3HC4  
ENSLOCP00000018842   1.29e-17   506-593   ZZ domain  
ENSLOCP00000018868   0.000000000000141   123-176   RING finger domain, C3HC4  
ENSLOCP00000018901   2.43e-21   58-130   RING finger domain, C3HC4  
ENSLOCP00000019081   0.00000235   315-368   IBR domain  
ENSLOCP00000019082   0.00000113   253-308   IBR domain  
ENSLOCP00000019151   1.88e-18   7-83   RING finger domain, C3HC4  
ENSLOCP00000019153   1.94e-19   12-94   RING finger domain, C3HC4  
ENSLOCP00000019175   0.0000000000183   39-109   RING finger domain, C3HC4  
ENSLOCP00000019384   6.24e-27   3-96   Zf-UBP  
ENSLOCP00000019409   0.00000000188   2-38   RING finger domain, C3HC4  
ENSLOCP00000019455   0.0000581   108-155   RING finger domain, C3HC4  
ENSLOCP00000019537   0.000000000000259   17-111   RING finger domain, C3HC4  
ENSLOCP00000019585   1.7e-23   434-507   Variant RING domain  
ENSLOCP00000019791   5.52e-18   9-79   RING finger domain, C3HC4  
ENSLOCP00000019873   2.3e-18   2-75   RING finger domain, C3HC4  
ENSLOCP00000019875   2.26e-18   2-75   RING finger domain, C3HC4  
ENSLOCP00000019877   0.00000000000236   230-298   RING finger domain, C3HC4  
ENSLOCP00000019883   0.000000495   304-368   RING finger domain, C3HC4  
ENSLOCP00000019905   0.00000000484   1429-1481   RING finger domain, C3HC4  
ENSLOCP00000019907   0.00000000479   1417-1469   RING finger domain, C3HC4  
ENSLOCP00000019927   4.83e-21   3239-3326   ZZ domain  
ENSLOCP00000019931   4.71e-21   3158-3245   ZZ domain  
ENSLOCP00000020142   2.47e-20   228-309   ZZ domain  
ENSLOCP00000020254   4.16e-18   381-439   RING finger domain, C3HC4  
ENSLOCP00000020278   0.00000000208   18-56   RING finger domain, C3HC4  
ENSLOCP00000020344   7.07e-21   12-85   RING finger domain, C3HC4  
ENSLOCP00000020388   0.000000000000101   415-459   RING finger domain, C3HC4  
  0.000565   327-377   IBR domain  
ENSLOCP00000020397   0.00000000118   36-76   RING finger domain, C3HC4  
ENSLOCP00000020692   0.000000000000191   90-170   RING finger domain, C3HC4  
  0.00000000000353   161-230   IBR domain  
  0.000000000283   259-312   RING finger domain, C3HC4  
ENSLOCP00000020693   0.000000000000198   111-191   RING finger domain, C3HC4  
  0.00000000000393   182-251   IBR domain  
  0.00000000029   280-333   RING finger domain, C3HC4  
ENSLOCP00000020696   0.00000000000000297   2157-2213   RING finger domain, C3HC4  
  0.000000000518   1997-2085   RING finger domain, C3HC4  
ENSLOCP00000020698   0.00000000000000724   2185-2241   RING finger domain, C3HC4  
ENSLOCP00000020700   0.00000000000000283   2155-2211   RING finger domain, C3HC4  
  0.000000000471   1995-2083   RING finger domain, C3HC4  
ENSLOCP00000020778   3.77e-16   24-108   RING finger domain, C3HC4  
  0.000000000000406   185-227   RING finger domain, C3HC4  
  0.000000023   100-165   IBR domain  
ENSLOCP00000021032   0.00000000636   43-111   RING finger domain, C3HC4  
ENSLOCP00000021033   0.00000000636   43-111   RING finger domain, C3HC4  
ENSLOCP00000021117   0.00000000000000589   37-147   Zf-UBP  
ENSLOCP00000021164   3.98e-22   8-82   RING finger domain, C3HC4  
ENSLOCP00000021166   3.76e-22   8-82   RING finger domain, C3HC4  
ENSLOCP00000021168   8.62e-21   8-80   RING finger domain, C3HC4  
ENSLOCP00000021169   8.84e-18   10-81   RING finger domain, C3HC4  
ENSLOCP00000021170   6.63e-18   11-82   RING finger domain, C3HC4  
ENSLOCP00000021172   1.15e-20   10-83   RING finger domain, C3HC4  
ENSLOCP00000021176   2.43e-21   10-82   RING finger domain, C3HC4  
ENSLOCP00000021179   6.63e-22   20-96   RING finger domain, C3HC4  
ENSLOCP00000021198   9.72e-23   9-83   RING finger domain, C3HC4  
ENSLOCP00000021212   1.39e-19   10-82   RING finger domain, C3HC4  
ENSLOCP00000021225   0.000000000309   27-79   U-box  
  0.00000565   216-269   U-box  
ENSLOCP00000021354   0.00000000000115   417-475   RING finger domain, C3HC4  
  0.000000000406   353-414   IBR domain  
  0.0000000162   277-351   RING finger domain, C3HC4  
ENSLOCP00000021403   0.00000000000000106   11-80   RING finger domain, C3HC4  
ENSLOCP00000021416   4.48e-17   10-94   RING finger domain, C3HC4  
ENSLOCP00000021435   0.0000000000273   4-59   RING finger domain, C3HC4  
ENSLOCP00000021436   0.00000000000408   8-75   RING finger domain, C3HC4  
ENSLOCP00000021437   0.0000000015   113-167   RING finger domain, C3HC4  
ENSLOCP00000021449   0.000000000000454   13-72   RING finger domain, C3HC4  
ENSLOCP00000021493   0.0000000000000103   23-94   RING finger domain, C3HC4  
ENSLOCP00000021690   0.00000000000707   13-74   RING finger domain, C3HC4  
ENSLOCP00000022031   0.00000000000000471   32-85   RING finger domain, C3HC4  
ENSLOCP00000022041   1.37e-16   5-79   RING finger domain, C3HC4  
ENSLOCP00000022198   0.00000000000139   16-71   RING finger domain, C3HC4  
ENSLOCP00000022217   5.05e-17   9-84   RING finger domain, C3HC4  
ENSLOCP00000022263   0.000000000000353   7-70   RING finger domain, C3HC4  
ENSLOCP00000022436   0.00000000073   20-87   RING finger domain, C3HC4  
ENSLOCP00000022467   0.000000000000353   20-91   RING finger domain, C3HC4  
 
Weak hits:
ENSLOCP00000000401   0.0618   131-172   RING finger domain, C3HC4  
ENSLOCP00000001668   0.000494   14-56   Zf-UBP  
ENSLOCP00000002672   0.0459   32-68   RING finger domain, C3HC4  
ENSLOCP00000004337   0.000547   760-815   RING finger domain, C3HC4  
ENSLOCP00000004352   0.000495   697-752   RING finger domain, C3HC4  
ENSLOCP00000004773   0.00015   184-234   RING finger domain, C3HC4  
ENSLOCP00000005887   0.000706   755-826   RING finger domain, C3HC4  
ENSLOCP00000005906   0.000589   713-784   RING finger domain, C3HC4  
ENSLOCP00000007201   0.00459   319-370   RING finger domain, C3HC4  
ENSLOCP00000007269   0.000589   13-63   RING finger domain, C3HC4  
ENSLOCP00000008030   0.0212   342-409   RING finger domain, C3HC4  
ENSLOCP00000008323   0.000636   1915-1976   ZZ domain  
ENSLOCP00000008343   0.0006   1847-1908   ZZ domain  
ENSLOCP00000011676   0.00307   758-788   ZZ domain  
ENSLOCP00000011884   0.00247   587-639   RING finger domain, C3HC4  
ENSLOCP00000011893   0.00194   484-536   RING finger domain, C3HC4  
ENSLOCP00000013269   0.00272   641-672   ZZ domain  
ENSLOCP00000013275   0.00268   631-662   ZZ domain  
ENSLOCP00000013769   0.00318   302-346   RING finger domain, C3HC4  
ENSLOCP00000013941   0.000965   772-826   RING finger domain, C3HC4  
ENSLOCP00000014764   0.00265   156-226   RING finger domain, C3HC4  
ENSLOCP00000014768   0.00265   148-218   RING finger domain, C3HC4  
ENSLOCP00000015956   0.0141   1143-1199   RING finger domain, C3HC4  
ENSLOCP00000015963   0.0145   1131-1187   RING finger domain, C3HC4  
ENSLOCP00000016073   0.0442   1152-1188   RING finger domain, C3HC4  
ENSLOCP00000018203   0.0441   304-360   RING finger domain, C3HC4  
ENSLOCP00000018808   0.00291   590-656   RING finger domain, C3HC4  
ENSLOCP00000019734   0.0795   203-253   U-box  
ENSLOCP00000019778   0.0177   301-342   RING finger domain, C3HC4  
ENSLOCP00000019950   0.000165   435-481   RING finger domain, C3HC4  
ENSLOCP00000020158   0.00959   54-93   RING finger domain, C3HC4  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.