SUPERFAMILY 1.75 HMM library and genome assignments server

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FnI-like domain superfamily domain assignments
in
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Assignment details

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Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) has 153 significant domains in 60 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|111305834|gb|AAI21468|   0.0000000000816   285-351   VWC domain  
  0.0000000105   700-772   VWC domain  
  0.00000952   352-409   VWC domain  
  0.0209   780-820   VWC domain  
gi|113205518|ref|NP_001037867|   0.0000000000000481   159-228   VWC domain  
  0.0000000199   286-361   VWC domain  
  0.00000157   101-167   VWC domain  
  0.00000732   64-108   VWC domain  
  0.000146   238-294   VWC domain  
gi|113931450|ref|NP_001039173|   0.0000000000837   104-162   VWC domain  
  0.000000115   40-101   VWC domain  
gi|124504228|gb|AAI28628|   0.00000000324   266-330   VWC domain  
  0.00000000356   686-758   VWC domain  
  0.000377   331-395   Fibronectin type I module  
gi|134023841|gb|AAI35585|   0.000000000000858   32-92   VWC domain  
gi|134024022|gb|AAI35156|   0.000000000481   1394-1452   VWC domain  
gi|134025775|gb|AAI35873|   0.0000000000000293   159-228   VWC domain  
  0.0000000178   286-361   VWC domain  
  0.00000146   101-167   VWC domain  
  0.0000068   64-108   VWC domain  
  0.0000157   238-294   VWC domain  
gi|134085437|ref|NP_001076815|   0.000000000481   1397-1455   VWC domain  
gi|148235875|ref|NP_001090754|   0.00000000324   266-330   VWC domain  
  0.00000000356   686-758   VWC domain  
  0.000377   331-395   Fibronectin type I module  
gi|157423105|gb|AAI53674|   0.000000000000387   32-92   VWC domain  
gi|159156011|gb|AAI54852|   0.0000000000837   104-162   VWC domain  
  0.000000115   40-101   VWC domain  
gi|170284560|gb|AAI61126|   0.00000000000277   150-218   VWC domain  
  0.00000000000329   6-73   VWC domain  
gi|172044151|gb|A4IGL7|   0.000000000481   1394-1452   VWC domain  
gi|183986599|ref|NP_001116889|   0.00000000000277   150-218   VWC domain  
  0.00000000000329   6-73   VWC domain  
gi|197245672|gb|AAI68603|   0.0000000000000617   691-752   VWC domain  
  0.000000199   770-840   VWC domain  
  0.000000575   41-118   VWC domain  
  0.00000167   857-921   VWC domain  
gi|197245782|gb|AAI68784|   0.00000000000067   32-92   VWC domain  
gi|215275684|gb|A2VCU8|   0.00000000324   266-330   VWC domain  
  0.00000000356   686-758   VWC domain  
  0.000377   331-395   Fibronectin type I module  
gi|217416468|ref|NP_001136129|   0.0000000000000617   691-752   VWC domain  
  0.000000199   770-840   VWC domain  
  0.000000575   41-118   VWC domain  
  0.00000167   857-921   VWC domain  
gi|218847780|ref|NP_001136379|   0.00000000000067   32-92   VWC domain  
gi|301603754|gb|XP_002931546|   0.00000000241   2-50   VWC domain  
gi|301603811|gb|XP_002931559|   0.00000000000105   323-383   VWC domain  
gi|301604031|gb|XP_002931676|   0.00000858   418-466   VWC domain  
  0.00115   885-931   VWC domain  
gi|301604482|gb|XP_002931908|   0.000000000000068   1639-1706   VWC domain  
  0.0000000000000743   721-786   VWC domain  
  0.000000000000335   1522-1587   VWC domain  
  0.000000000000732   377-439   VWC domain  
  0.000000000000931   494-553   VWC domain  
  0.00000000000104   959-1027   VWC domain  
  0.00000000000314   840-906   VWC domain  
  0.0000000000045   1581-1646   VWC domain  
  0.00000000000858   1226-1292   VWC domain  
  0.0000000000103   1697-1768   VWC domain  
  0.0000000000209   1403-1469   VWC domain  
  0.0000000000429   603-671   VWC domain  
  0.0000000000732   1470-1527   VWC domain  
  0.0000000000743   1169-1236   VWC domain  
  0.0000000000785   1833-1894   VWC domain  
  0.000000000115   662-728   VWC domain  
  0.000000000167   901-966   VWC domain  
  0.000000000188   779-846   VWC domain  
  0.000000000251   1758-1829   VWC domain  
  0.00000000115   445-494   VWC domain  
  0.000000596   1285-1347   VWC domain  
  0.000000617   1346-1402   VWC domain  
  0.00000262   336-373   VWC domain  
  0.00000963   1119-1175   VWC domain  
  0.0000167   546-596   VWC domain  
  0.0000262   1024-1079   Fibronectin type I module  
gi|301604798|gb|XP_002932063|   0.00000000091   103-173   VWC domain  
  0.00272   51-111   Fibronectin type I module  
  0.0199   172-217   VWC domain  
gi|301605569|gb|XP_002932342|   0.0000282   373-420   VWC domain  
  0.00023   2625-2705   VWC domain  
  0.000241   854-901   VWC domain  
  0.0199   732-773   VWC domain  
  0.068   2473-2548   Fibronectin type I module  
gi|301607125|gb|XP_002933163|   0.0000157   137-207   VWC domain  
  0.00816   80-144   VWC domain  
gi|301607752|gb|XP_002933463|   0.000000000408   206-275   VWC domain  
  0.000377   153-213   Fibronectin type I module  
  0.0345   278-323   Fibronectin type I module  
gi|301609449|gb|XP_002934286|   0.000000000000534   102-162   VWC domain  
gi|301611978|gb|XP_002935497|   0.0000000000282   560-628   VWC domain  
  0.000000000115   365-437   VWC domain  
  0.000000000418   435-501   VWC domain  
  0.00000000136   502-563   VWC domain  
  0.0000000481   652-705   VWC domain  
  0.00000167   315-371   VWC domain  
gi|301613152|gb|XP_002936079|   0.0000806   393-440   VWC domain  
gi|301613154|gb|XP_002936080|   0.00000638   373-414   Fibronectin type I module  
  0.0000188   3173-3253   VWC domain  
  0.000523   836-883   VWC domain  
gi|301613162|gb|XP_002936084|   0.00000994   3590-3638   VWC domain  
  0.0000942   2128-2202   VWC domain  
  0.000418   3211-3252   Fibronectin type I module  
  0.000638   2370-2432   VWC domain  
  0.00178   2569-2632   VWC domain  
  0.00262   2657-2718   VWC domain  
  0.00764   2213-2275   VWC domain  
  0.0188   475-516   VWC domain  
  0.0596   2296-2359   VWC domain  
gi|301613169|gb|XP_002936076|   0.00000983   3-77   VWC domain  
  0.0439   233-289   VWC domain  
  0.0743   161-223   VWC domain  
gi|301613865|gb|XP_002936419|   0.000000000000387   806-870   VWC domain  
  0.000000000000398   394-453   VWC domain  
  0.00000000000251   672-730   VWC domain  
  0.0000000000293   313-386   VWC domain  
  0.0000000000366   749-804   VWC domain  
  0.0000000157   599-658   VWC domain  
gi|301615031|gb|XP_002936979|   0.0000178   113-154   VWC domain  
gi|301615580|gb|XP_002937245|   0.000000000000188   322-380   VWC domain  
gi|301616512|gb|XP_002937702|   0.000000000000711   91-156   VWC domain  
  0.000000000000816   453-518   VWC domain  
  0.000000000555   41-99   VWC domain  
  0.00000000398   402-461   VWC domain  
  0.0000345   511-569   VWC domain  
  0.0000366   149-207   VWC domain  
gi|301616514|gb|XP_002937703|   0.0000000000827   429-485   VWC domain  
  0.000046   478-514   VWC domain  
gi|301619787|gb|XP_002939269|   0.0000269   146-179   Fibronectin type I module  
gi|301621756|gb|XP_002940211|   0.0000398   811-860   VWC domain  
  0.0262   352-393   Fibronectin type I module  
gi|301621766|gb|XP_002940216|   0.0000513   967-1015   VWC domain  
  0.0366   1324-1371   VWC domain  
gi|301624140|gb|XP_002941365|   0.0000115   494-541   VWC domain  
  0.000241   352-393   VWC domain  
  0.00146   933-980   VWC domain  
gi|301626584|gb|XP_002942470|   0.0000879   830-877   VWC domain  
  0.0858   732-773   Fibronectin type I module  
gi|301626898|gb|XP_002942623|   0.00000303   886-952   Fibronectin type I module  
  0.00000356   4880-4946   VWC domain  
  0.00000513   986-1036   VWC domain  
  0.000115   5766-5825   VWC domain  
  0.000209   4978-5039   VWC domain  
  0.000607   3430-3487   VWC domain  
  0.0167   535-576   Fibronectin type I module  
gi|334191726|gb|DAA34812|   0.0000272   339-386   VWC domain  
  0.00023   2598-2678   VWC domain  
  0.000241   820-867   VWC domain  
  0.0188   698-739   VWC domain  
gi|38648940|gb|AAH63191|   0.000000000000523   36-95   VWC domain  
gi|45361285|ref|NP_989220|   0.000000000000523   36-95   VWC domain  
gi|51699215|gb|CAH17904|   0.0000000000387   264-322   VWC domain  
gi|52139099|gb|AAH82718|   0.00000000000387   31-89   VWC domain  
gi|56556235|gb|AAH87808|   0.0000000753   90-161   VWC domain  
gi|57230943|gb|DAA05635|   0.000000000481   1397-1455   VWC domain  
gi|58332178|ref|NP_001011237|   0.0000000753   90-161   VWC domain  
gi|58332412|ref|NP_001011005|   0.00000000000387   31-89   VWC domain  
gi|59940686|gb|AAX12853|   0.0000000000000481   159-228   VWC domain  
  0.0000000199   286-361   VWC domain  
  0.00000157   101-167   VWC domain  
  0.00000732   64-108   VWC domain  
  0.000146   238-294   VWC domain  
gi|60552029|gb|AAH91010|   0.0000000000000223   30-75   Fibronectin type I module  
gi|63102077|gb|AAH95906|   0.00000000000000877   553-598   Fibronectin type I module  
  0.0000000000000759   2340-2383   Fibronectin type I module  
  0.000000000000123   468-507   Fibronectin type I module  
  0.000000000000157   91-136   Fibronectin type I module  
  0.000000000000262   2295-2338   Fibronectin type I module  
  0.000000000000406   228-272   Fibronectin type I module  
  0.000000000000563   511-555   Fibronectin type I module  
  0.00000000000144   181-226   Fibronectin type I module  
  0.00000000000301   47-88   Fibronectin type I module  
  0.00000000000406   139-179   Fibronectin type I module  
  0.0000000000353   2383-2424   Fibronectin type I module  
  0.000000000432   302-339   Fibronectin type I module  
gi|71895737|ref|NP_001025695|   0.00000000000000877   553-598   Fibronectin type I module  
  0.0000000000000759   2340-2383   Fibronectin type I module  
  0.000000000000123   468-507   Fibronectin type I module  
  0.000000000000157   91-136   Fibronectin type I module  
  0.000000000000262   2295-2338   Fibronectin type I module  
  0.000000000000406   228-272   Fibronectin type I module  
  0.000000000000563   511-555   Fibronectin type I module  
  0.00000000000144   181-226   Fibronectin type I module  
  0.00000000000301   47-88   Fibronectin type I module  
  0.00000000000406   139-179   Fibronectin type I module  
  0.0000000000353   2383-2424   Fibronectin type I module  
  0.000000000432   302-339   Fibronectin type I module  
gi|71896209|ref|NP_001025574|   0.0000000000000223   30-75   Fibronectin type I module  
gi|82202407|sp|Q6P4Z2|   0.000000000000523   36-95   VWC domain  
gi|89268230|gb|CAJ83310|   0.0000000000837   104-162   VWC domain  
  0.000000115   40-101   VWC domain  
 
Weak hits:
gi|113931544|ref|NP_001039221|   0.000157   223-264   VWC domain  
gi|157502189|ref|NP_001098984|   0.00649   98-164   Fibronectin type I module  
gi|301611074|gb|XP_002935069|   0.0046   261-315   Fibronectin type I module  
  0.00617   650-703   Fibronectin type I module  
gi|301613010|gb|XP_002936005|   0.00356   34-84   Fibronectin type I module  
gi|301613013|gb|XP_002936006|   0.00167   33-85   Fibronectin type I module  
gi|301613015|gb|XP_002936007|   0.0115   31-83   Fibronectin type I module  
gi|301613019|gb|XP_002936015|   0.0293   51-87   Fibronectin type I module  
gi|301613156|gb|XP_002936081|   0.00199   790-867   VWC domain  
  0.00251   862-937   VWC domain  
gi|301613160|gb|XP_002936083|   0.000272   2539-2624   VWC domain  
  0.00199   739-779   VWC domain  
  0.00209   3072-3132   VWC domain  
  0.00387   2635-2697   Fibronectin type I module  
  0.0167   3581-3642   VWC domain  
  0.0502   2926-2989   VWC domain  
  0.0523   3288-3351   VWC domain  
gi|301613164|gb|XP_002936085|   0.00167   1043-1128   VWC domain  
  0.0753   1138-1197   VWC domain  
gi|301613171|gb|XP_002936086|   0.000398   329-376   Fibronectin type I module  
  0.00188   802-842   VWC domain  
gi|301613173|gb|XP_002936087|   0.023   1040-1108   VWC domain  
  0.0408   1233-1291   VWC domain  
  0.0481   1145-1221   Fibronectin type I module  
gi|301613175|gb|XP_002936088|   0.009   494-558   Fibronectin type I module  
  0.0146   719-785   Fibronectin type I module  
  0.0199   415-482   VWC domain  
  0.0272   796-861   Fibronectin type I module  
  0.0314   948-1014   VWC domain  
  0.045   248-331   VWC domain  
  0.0691   644-710   VWC domain  
gi|301613177|gb|XP_002936089|   0.00262   419-466   Fibronectin type I module  
gi|301614105|gb|XP_002936537|   0.000387   3308-3394   VWC domain  
  0.00105   348-414   Fibronectin type I module  
gi|301617169|gb|XP_002938019|   0.000115   93-159   Fibronectin type I module  
gi|301618303|gb|XP_002938567|   0.000303   23-53   VWC domain  
  0.000575   379-422   Fibronectin type I module  
gi|301619189|gb|XP_002938983|   0.00209   585-628   VWC domain  
gi|301620396|gb|XP_002939562|   0.000146   104-169   VWC domain  
gi|301621748|gb|XP_002940207|   0.000199   818-865   VWC domain  
  0.00921   358-399   Fibronectin type I module  
  0.0785   720-761   Fibronectin type I module  
gi|301621750|gb|XP_002940208|   0.00251   1093-1173   VWC domain  
gi|301621752|gb|XP_002940209|   0.000544   130-210   VWC domain  
gi|301621754|gb|XP_002940210|   0.00126   692-740   Fibronectin type I module  
  0.00178   1024-1072   Fibronectin type I module  
  0.00398   2767-2847   VWC domain  
  0.0126   331-372   Fibronectin type I module  
  0.0199   2083-2121   VWC domain  
  0.0408   1582-1624   VWC domain  
  0.0418   1260-1303   VWC domain  
  0.0471   1628-1671   VWC domain  
  0.0471   1766-1803   VWC domain  
  0.0523   1168-1210   VWC domain  
  0.0638   1490-1533   VWC domain  
  0.0837   1214-1255   VWC domain  
  0.0847   1076-1120   VWC domain  
  0.0931   1948-1990   VWC domain  
  0.0973   1720-1762   VWC domain  
gi|301622519|gb|XP_002940579|   0.000126   984-1047   VWC domain  
  0.00586   2092-2148   Fibronectin type I module  
gi|301622521|gb|XP_002940580|   0.000303   1280-1336   Fibronectin type I module  
gi|301622523|gb|XP_002940581|   0.00251   1182-1237   Fibronectin type I module  
  0.0188   3992-4046   VWC domain  
gi|301624132|gb|XP_002941361|   0.000115   411-452   Fibronectin type I module  
  0.00105   837-877   VWC domain  
  0.0931   1244-1276   Fibronectin type I module  
gi|301624136|gb|XP_002941363|   0.000115   819-859   VWC domain  
  0.00115   352-393   VWC domain  
  0.1   714-755   Fibronectin type I module  
gi|301625744|gb|XP_002942062|   0.000314   791-831   VWC domain  
  0.0408   352-393   VWC domain  
gi|301626700|gb|XP_002942528|   0.000889   352-393   VWC domain  
  0.00513   594-641   Fibronectin type I module  
gi|301628369|gb|XP_002943328|   0.000105   703-750   VWC domain  
  0.0126   372-413   Fibronectin type I module  
  0.0889   605-646   Fibronectin type I module  
gi|301628398|gb|XP_002943339|   0.000711   528-608   VWC domain  
gi|60551248|gb|AAH91005|   0.0216   96-128   Fibronectin type I module  
gi|62632715|ref|NP_001015042|   0.0216   96-128   Fibronectin type I module  
gi|62857413|ref|NP_001016840|   0.000314   265-330   VWC domain  
gi|89272494|gb|CAJ82730|   0.000157   223-264   VWC domain  
gi|89273413|gb|CAJ82632|   0.000314   265-330   VWC domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   105027 105027
No Yes Homo sapiens 76_38 Human 383 107
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 68 29
No Yes Gorilla gorilla 76_3.1 Western gorilla 125 45
No Yes Pongo abelii 76_2 Sumatran orangutan 89 33
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 91 32
No Yes Papio anubis 76 Olive baboon 98 30
No Yes Macaca mulatta 76_1 Rhesus monkey 238 57
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 257 100
No Yes Otolemur garnettii 76_3 Small-eared galago 79 28
No Yes Microcebus murinus 76_1 Gray mouse lemur 66 27
No Yes Rattus norvegicus 76_5.0 Norway rat 125 42
No Yes Mus musculus 76_38 House mouse 258 68
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 67 29
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 87 32
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 73 31
No Yes Cavia porcellus 76_3 Domestic guinea pig 96 37
No Yes Oryctolagus cuniculus 76_2 Rabbit 106 38
No Yes Ochotona princeps 76 American pika 63 25
No Yes Tupaia belangeri 76 Northern tree shrew 42 23
No Yes Sus scrofa 76_10.2 Pig 144 43
No Yes Bos taurus 76_3.1 Cattle 154 37
No Yes Ovis aries 76_3.1 Sheep 113 39
No Yes Vicugna pacos 76_1 Alpaca 44 21
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 78 28
No Yes Mustela putorius furo 76_1.0 Domestic ferret 96 35
No Yes Ailuropoda melanoleuca 76_1 Giant panda 110 42
No Yes Canis familiaris 76_3.1 Dog 144 52
No Yes Felis catus 76_6.2 Domestic cat 101 37
No Yes Equus caballus 76_2 Horse 146 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 109 33
No Yes Pteropus vampyrus 76_1 Large flying fox 80 32
No Yes Sorex araneus 76_1 European shrew 36 20
No Yes Erinaceus europaeus 76 Western European hedgehog 39 18
No Yes Procavia capensis 76_1 Cape rock hyrax 60 31
No Yes Loxodonta africana 76_3 African savanna elephant 110 42
No Yes Echinops telfairi 76 Small Madagascar hedgehog 60 29
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 91 39
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 39 17
No Yes Macropus eugenii 76_1.0 Tammar wallaby 40 21
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 95 44
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 82 35
No Yes Ornithorhynchus anatinus 76_5 Platypus 85 41
No Yes Saccoglossus kowalevskii v3.0   266 96
No Yes Petromyzon marinus 76_7.0 Sea lamprey 47 24
No Yes Meleagris gallopavo 76_2 Turkey 65 39
No Yes Gallus gallus 76_4 Chicken 82 30
No Yes Anas platyrhynchos 76_1.0 Mallard 65 31
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 68 34
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 76 37
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 70 35
No Yes Anolis carolinensis 76_2.0 Green anole 96 36
No Yes Xenopus laevis African clawed frog 225 64
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 162 50
No Yes Latimeria chalumnae 76_1 Coelacanth 114 49
No Yes Lepisosteus oculatus 76 Spotted gar 174 58
No Yes Gadus morhua 76_1 Atlantic cod 84 39
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 190 59
No Yes Takifugu rubripes 76_4 Torafugu 363 145
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 104 55
No Yes Oryzias latipes 76_1 Japanese medaka 110 48
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 106 39
No Yes Poecilia formosa 76 Amazon molly 113 45
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 161 55
No Yes Astyanax mexicanus 76 Mexican tetra 105 46
No Yes Danio rerio 76_9 Zebrafish 195 80
No Yes Oikopleura dioica   11 8
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 117 45
No Yes Ciona intestinalis 76 Vase tunicate 60 24
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 124 36
No Yes Adineta vaga   24 5
No Yes Octopus bimaculoides 280   555 83
No Yes Crassostrea gigas 22 Pacific oyster 121 40
No Yes Lottia gigantea Owl limpet 84 33
No Yes Helobdella robusta   7 5
No Yes Capitella sp. I   29 15
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 9
No Yes Heliconius melpomene Postman butterfly 20 7
No Yes Bombyx mori Domestic silkworm 16 10
No Yes Nasonia vitripennis Jewel wasp 27 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 42 13
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 21 8
No Yes Linepithema humile v1.1 Argentine ant 21 8
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 19 9
No Yes Solenopsis invicta v.2.2.3 Red fire ant 19 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 24 8
No Yes Atta cephalotes v1.1   22 10
No Yes Camponotus floridanus v3.3 Florida carpenter ant 24 8
No Yes Lucilia cuprina Australian sheep blowfly 23 9
No Yes Drosophila grimshawi 1.3   26 13
No Yes Drosophila willistoni 1.3   27 13
No Yes Drosophila pseudoobscura 2.13   23 13
No Yes Drosophila persimilis 1.3   25 11
No Yes Drosophila suzukii   23 9
No Yes Drosophila yakuba 1.3   25 13
No Yes Drosophila simulans 1.3   20 11
No Yes Drosophila sechellia 1.3   25 13
No Yes Drosophila melanogaster 76_5 Fruit fly 51 24
No Yes Drosophila erecta 1.3   27 13
No Yes Drosophila ananassae 1.3   27 14
No Yes Drosophila virilis 1.2   26 12
No Yes Drosophila mojavensis 1.3   28 14
No Yes Megaselia scalaris 22   7 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 23 12
No Yes Culex pipiens quinquefasciatus Southern house mosquito 29 15
No Yes Anopheles darlingi 22 American malaria mosquito 17 12
No Yes Anopheles gambiae 49_3j African malaria mosquito 24 11
No Yes Tribolium castaneum 3.0 Red flour beetle 29 12
No Yes Pediculus humanus corporis (Early assembly) Human body louse 25 11
No Yes Acyrthosiphon pisum Pea aphid 18 6
No Yes Rhodnius prolixus 22   29 10
No Yes Daphnia pulex Common water flea 30 18
No Yes Strigamia maritima 22   34 17
No Yes Sarcoptes scabiei   13 5
No Yes Tetranychus urticae Two-spotted spider mite 31 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 25 9
No Yes Pristionchus pacificus   9 4
No Yes Meloidogyne incognita Southern root-knot nematode 5 3
No Yes Meloidogyne hapla   7 2
No Yes Onchocerca volvulus 22   7 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 2
No Yes Caenorhabditis japonica   7 2
No Yes Caenorhabditis brenneri   6 2
No Yes Caenorhabditis remanei   7 3
No Yes Caenorhabditis elegans 76_235 Roundworm 31 8
No Yes Caenorhabditis briggsae 2   6 2
No Yes Trichinella spiralis 22   10 5
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 39 21
No Yes Acropora digitifera v1.0   23 15
No Yes Nematostella vectensis 1.0 Starlet sea anemone 18 12
No Yes Hydra vulgaris   10 6
No Yes Amphimedon queenslandica   7 4
No Yes Trichoplax adhaerens   30 4
No Yes Sorangium cellulosum 'So ce 56'   2 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 153 60
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 28 19
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 25 12
No Yes Ascaris suum Victoria/Ghent Pig roundworm 10 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 24 6
No Yes Sorangium cellulosum So0157-2   4 1
No Yes Homo sapiens 75_37 (old version GRC) Human 363 114
No Yes Homo sapiens (NCBI version) Human 201 59
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 95 33
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 8 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 1
No Yes Homo sapiens 69_37 Human 84 35
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 68 29
No Yes Gorilla gorilla 69_3.1 Western gorilla 102 38
No Yes Pongo abelii 69_2 Sumatran orangutan 73 30
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 79 31
No Yes Macaca mulatta 69_1 Rhesus monkey 73 26
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 91 36
No Yes Otolemur garnettii 69_3 Small-eared galago 79 28
No Yes Microcebus murinus 69_1 Gray mouse lemur 66 27
No Yes Rattus norvegicus 69_3.4 Norway rat 90 34
No Yes Mus musculus 69_38 House mouse 94 33
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 67 29
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 81 30
No Yes Cavia porcellus 69_3 Domestic guinea pig 96 37
No Yes Oryctolagus cuniculus 69_2 Rabbit 91 34
No Yes Ochotona princeps 69 American pika 63 25
No Yes Tupaia belangeri 69 Northern tree shrew 42 23
No Yes Sus scrofa 69_10.2 Pig 84 29
No Yes Bos taurus 69_3.1 Cattle 92 32
No Yes Vicugna pacos 69_1 Alpaca 44 21
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 78 28
No Yes Mustela putorius furo 69_1.0 Domestic ferret 96 35
No Yes Ailuropoda melanoleuca 69_1 Giant panda 94 37
No Yes Canis familiaris 69_3.1 Dog 101 38
No Yes Felis catus 69 Domestic cat 48 24
No Yes Equus caballus 69_2 Horse 93 33
No Yes Myotis lucifugus 69_2.0 Little brown bat 71 28
No Yes Pteropus vampyrus 69_1 Large flying fox 80 32
No Yes Sorex araneus 69_1 European shrew 36 20
No Yes Erinaceus europaeus 69 Western European hedgehog 39 18
No Yes Procavia capensis 69_1 Cape rock hyrax 60 31
No Yes Loxodonta africana 69_3 African savanna elephant 87 31
No Yes Echinops telfairi 69 Small Madagascar hedgehog 60 29
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 47 26
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 39 17
No Yes Macropus eugenii 69_1.0 Tammar wallaby 40 21
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 85 36
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 80 33
No Yes Ornithorhynchus anatinus 69_5 Platypus 75 39
No Yes Petromyzon marinus 69_7.0 Sea lamprey 42 19
No Yes Meleagris gallopavo 69_2 Turkey 58 32
No Yes Gallus gallus 69_2 Chicken 62 30
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 66 32
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 65 32
No Yes Anolis carolinensis 69_2.0 Green anole 92 36
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 102 39
No Yes Latimeria chalumnae 69_1 Coelacanth 101 42
No Yes Gadus morhua 69_1 Atlantic cod 80 35
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 95 34
No Yes Takifugu rubripes 69_4 Torafugu 97 36
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 87 40
No Yes Oryzias latipes 69_1 Japanese medaka 91 35
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 106 39
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 105 41
No Yes Danio rerio 69_9 Zebrafish 120 51
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 52 18
No Yes Ciona intestinalis 69 Vase tunicate 49 21
No Yes Drosophila melanogaster 69_5 Fruit fly 26 12
No Yes Caenorhabditis elegans 69_215 Roundworm 7 2
No Yes NCBI 2017_08 genome   52215 16311
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 2
No Yes STRING v9.0.5 (STRING)   2925 1172
No Yes Uniprot 2018_03 genome   27002 10540
No Yes Global Ocean Sampling Expedition (GOS)   4 3
No Yes PDB chains (SCOP 1.75) (PDB)   13 9
No Yes Protein Data Bank (all PDB sequenc)   83 50
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   179 179
No Yes TargetDB (Targets)   39 21
No Yes UniProt viral sequences (Viral)   19 19

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