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DEATH domain superfamily domain assignments
in
Callithrix jacchus 69_3.2.1

Assignment details

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Callithrix jacchus 69_3.2.1 has 86 significant domains in 77 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000000289   4.37e-20   248-329   DEATH domain, DD  
ENSCJAP00000000369   6.12e-17   436-519   Caspase recruitment domain, CARD  
ENSCJAP00000000854   8.48e-17   344-430   Caspase recruitment domain, CARD  
ENSCJAP00000000910   1.74e-20   26-121   Caspase recruitment domain, CARD  
ENSCJAP00000001167   5.3e-25   344-443   DEATH domain, DD  
ENSCJAP00000002255   0.000001   376-460   DEATH domain, DD  
ENSCJAP00000004293   2.17e-22   1-92   Caspase recruitment domain, CARD  
ENSCJAP00000005134   3.36e-19   821-899   DEATH domain, DD  
ENSCJAP00000005358   1.3e-23   1-90   Caspase recruitment domain, CARD  
  5.65e-19   110-191   DEATH domain, DD  
ENSCJAP00000005823   5.65e-19   111-197   Caspase recruitment domain, CARD  
  1.41e-18   4-91   Pyrin domain, PYD  
ENSCJAP00000006242   0.0000000000000016   3-106   Caspase recruitment domain, CARD  
ENSCJAP00000006501   9.42e-22   25-126   DEATH domain, DD  
ENSCJAP00000006722   3.24e-25   3535-3643   DEATH domain, DD  
ENSCJAP00000006902   2.4e-22   453-551   Caspase recruitment domain, CARD  
ENSCJAP00000007352   2.8e-19   404-490   DEATH domain, DD  
ENSCJAP00000007705   3.7e-22   1399-1484   DEATH domain, DD  
ENSCJAP00000008198   2e-23   90-194   DEATH effector domain, DED  
  0.0000000102   5-74   DEATH effector domain, DED  
ENSCJAP00000008232   1.41e-24   15-120   DEATH effector domain, DED  
  0.0000000000000424   108-185   DEATH effector domain, DED  
ENSCJAP00000009601   0.00000129   415-496   DEATH domain, DD  
ENSCJAP00000009617   0.00000109   415-497   DEATH domain, DD  
ENSCJAP00000009737   0.000000000000141   25-101   DEATH effector domain, DED  
ENSCJAP00000010224   4.71e-20   161-245   Pyrin domain, PYD  
ENSCJAP00000010265   4.71e-18   1207-1297   DEATH domain, DD  
ENSCJAP00000010424   9.03e-37   213-327   DEATH domain, DD  
ENSCJAP00000010665   0.000000000000124   207-287   DEATH domain, DD  
  0.0000000135   293-371   DEATH domain, DD  
ENSCJAP00000010669   0.000000000000124   207-287   DEATH domain, DD  
  0.0000000135   293-371   DEATH domain, DD  
ENSCJAP00000010971   1.58e-36   1-125   DEATH effector domain, DED  
ENSCJAP00000010998   0.0000000659   116-198   Caspase recruitment domain, CARD  
ENSCJAP00000011655   2.35e-17   5-85   Pyrin domain, PYD  
ENSCJAP00000013051   6.28e-24   840-924   DEATH domain, DD  
ENSCJAP00000013053   5.18e-21   13-103   Caspase recruitment domain, CARD  
ENSCJAP00000013058   4.47e-22   831-913   DEATH domain, DD  
ENSCJAP00000013540   7.65e-20   808-888   DEATH domain, DD  
ENSCJAP00000013737   1.08e-17   4-95   Caspase recruitment domain, CARD  
ENSCJAP00000014390   4.83e-24   2-88   Pyrin domain, PYD  
ENSCJAP00000015167   4.12e-31   4-93   Pyrin domain, PYD  
ENSCJAP00000015813   1.27e-17   17-93   Caspase recruitment domain, CARD  
ENSCJAP00000017611   1.84e-22   32-122   Caspase recruitment domain, CARD  
ENSCJAP00000017984   0.0000000000259   5-86   Caspase recruitment domain, CARD  
ENSCJAP00000018098   7.53e-20   2-85   Caspase recruitment domain, CARD  
ENSCJAP00000018605   0.0000312   255-343   DEATH domain, DD  
ENSCJAP00000018774   5e-26   20-135   DEATH domain, DD  
ENSCJAP00000019962   2.94e-19   8-105   Caspase recruitment domain, CARD  
ENSCJAP00000020774   8.12e-22   1-92   Pyrin domain, PYD  
  1.18e-16   1383-1469   Caspase recruitment domain, CARD  
ENSCJAP00000021788   2.91e-21   625-724   DEATH domain, DD  
ENSCJAP00000021872   0.000000000000106   408-495   DEATH domain, DD  
  0.011   594-650   Caspase recruitment domain, CARD  
ENSCJAP00000021914   6.83e-17   7-90   Pyrin domain, PYD  
ENSCJAP00000023428   0.00000000000224   24-104   DEATH effector domain, DED  
ENSCJAP00000024656   7.65e-38   1-114   DEATH domain, DD  
ENSCJAP00000026766   8.64e-28   4-106   DEATH domain, DD  
ENSCJAP00000026784   1.05e-24   4-106   DEATH domain, DD  
ENSCJAP00000028399   7.06e-16   809-890   DEATH domain, DD  
ENSCJAP00000030199   6.77e-27   3-95   DEATH domain, DD  
ENSCJAP00000030316   9.42e-16   5-94   Caspase recruitment domain, CARD  
ENSCJAP00000030353   0.0000000000000184   221-305   DEATH domain, DD  
ENSCJAP00000031497   1.58e-18   352-447   DEATH domain, DD  
ENSCJAP00000031595   2.12e-27   4-93   Pyrin domain, PYD  
ENSCJAP00000031741   2.12e-24   2-91   Pyrin domain, PYD  
ENSCJAP00000032602   5.77e-22   6-93   Pyrin domain, PYD  
ENSCJAP00000032632   1.12e-24   575-666   DEATH domain, DD  
ENSCJAP00000032660   3.53e-17   33-119   Pyrin domain, PYD  
ENSCJAP00000033111   0.00000000000863   723-803   DEATH domain, DD  
ENSCJAP00000034026   1.77e-22   12-93   Pyrin domain, PYD  
ENSCJAP00000034795   4.24e-21   18-116   Caspase recruitment domain, CARD  
ENSCJAP00000037420   3.3e-20   362-460   DEATH domain, DD  
ENSCJAP00000038021   2.49e-23   559-651   DEATH domain, DD  
ENSCJAP00000039017   0.000000000000306   677-770   DEATH domain, DD  
ENSCJAP00000040674   1.46e-25   2-87   Caspase recruitment domain, CARD  
ENSCJAP00000041730   4.12e-21   4-87   Pyrin domain, PYD  
ENSCJAP00000042127   1.82e-20   162-248   DEATH domain, DD  
ENSCJAP00000043555   1.41e-25   4030-4140   DEATH domain, DD  
ENSCJAP00000046367   5.89e-33   52-164   DEATH effector domain, DED  
  7.85e-19   149-230   DEATH effector domain, DED  
ENSCJAP00000047152   1.81e-24   4-95   Caspase recruitment domain, CARD  
ENSCJAP00000048508   2.83e-20   7-89   Pyrin domain, PYD  
ENSCJAP00000049739   0.00000000000000132   24-101   Caspase recruitment domain, CARD  
  0.000000000000104   121-204   Caspase recruitment domain, CARD  
ENSCJAP00000050398   4.45e-33   1-133   DEATH domain, DD  
  0.00282   110-180   DEATH domain, DD  
ENSCJAP00000050751   1.35e-21   334-419   DEATH domain, DD  
 
Weak hits:
ENSCJAP00000002009   0.00639   738-808   DEATH domain, DD  
ENSCJAP00000004862   0.0439   827-901   Caspase recruitment domain, CARD  
ENSCJAP00000006269   0.00283   7-48   Caspase recruitment domain, CARD  
ENSCJAP00000011681   0.00847   7-74   Pyrin domain, PYD  
ENSCJAP00000014472   0.0918   1-91   Caspase recruitment domain, CARD  
ENSCJAP00000024292   0.00206   40-94   Caspase recruitment domain, CARD  
ENSCJAP00000025775   0.00706   765-855   DEATH domain, DD  
ENSCJAP00000045837   0.00113   7-83   Pyrin domain, PYD  

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Select to display   Genome       Domains   Proteins
No Yes ALL   102164 102164
No Yes Homo sapiens 76_38 Human 495 454
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 95 87
No Yes Gorilla gorilla 76_3.1 Western gorilla 118 111
No Yes Pongo abelii 76_2 Sumatran orangutan 85 77
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 92 83
No Yes Papio anubis 76 Olive baboon 99 91
No Yes Macaca mulatta 76_1 Rhesus monkey 190 169
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 213 193
No Yes Otolemur garnettii 76_3 Small-eared galago 87 79
No Yes Microcebus murinus 76_1 Gray mouse lemur 66 60
No Yes Rattus norvegicus 76_5.0 Norway rat 98 93
No Yes Mus musculus 76_38 House mouse 231 216
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 66 63
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 89 79
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 65 60
No Yes Cavia porcellus 76_3 Domestic guinea pig 67 60
No Yes Oryctolagus cuniculus 76_2 Rabbit 70 65
No Yes Ochotona princeps 76 American pika 65 60
No Yes Tupaia belangeri 76 Northern tree shrew 51 49
No Yes Sus scrofa 76_10.2 Pig 101 95
No Yes Bos taurus 76_3.1 Cattle 84 78
No Yes Ovis aries 76_3.1 Sheep 88 79
No Yes Vicugna pacos 76_1 Alpaca 42 38
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 70 63
No Yes Mustela putorius furo 76_1.0 Domestic ferret 78 70
No Yes Ailuropoda melanoleuca 76_1 Giant panda 85 76
No Yes Canis familiaris 76_3.1 Dog 111 100
No Yes Felis catus 76_6.2 Domestic cat 80 73
No Yes Equus caballus 76_2 Horse 94 86
No Yes Myotis lucifugus 76_2.0 Little brown bat 89 80
No Yes Pteropus vampyrus 76_1 Large flying fox 69 65
No Yes Sorex araneus 76_1 European shrew 46 40
No Yes Erinaceus europaeus 76 Western European hedgehog 50 44
No Yes Procavia capensis 76_1 Cape rock hyrax 58 53
No Yes Loxodonta africana 76_3 African savanna elephant 101 92
No Yes Echinops telfairi 76 Small Madagascar hedgehog 50 48
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 98 91
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 37 35
No Yes Macropus eugenii 76_1.0 Tammar wallaby 60 55
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 91 84
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 81 73
No Yes Ornithorhynchus anatinus 76_5 Platypus 61 54
No Yes Saccoglossus kowalevskii v3.0   290 248
No Yes Petromyzon marinus 76_7.0 Sea lamprey 26 24
No Yes Meleagris gallopavo 76_2 Turkey 81 73
No Yes Gallus gallus 76_4 Chicken 69 63
No Yes Anas platyrhynchos 76_1.0 Mallard 63 56
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 56 51
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 62 55
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 90 80
No Yes Anolis carolinensis 76_2.0 Green anole 57 54
No Yes Xenopus laevis African clawed frog 139 117
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 77 67
No Yes Latimeria chalumnae 76_1 Coelacanth 90 79
No Yes Lepisosteus oculatus 76 Spotted gar 110 97
No Yes Gadus morhua 76_1 Atlantic cod 78 72
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 72 68
No Yes Takifugu rubripes 76_4 Torafugu 249 222
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 125 113
No Yes Oryzias latipes 76_1 Japanese medaka 65 63
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 83 76
No Yes Poecilia formosa 76 Amazon molly 92 83
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 120 110
No Yes Astyanax mexicanus 76 Mexican tetra 89 83
No Yes Danio rerio 76_9 Zebrafish 191 177
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 25 24
No Yes Ciona intestinalis 76 Vase tunicate 25 22
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 258 233
No Yes Adineta vaga   54 54
No Yes Octopus bimaculoides 280   213 208
No Yes Crassostrea gigas 22 Pacific oyster 113 99
No Yes Lottia gigantea Owl limpet 74 66
No Yes Helobdella robusta   38 36
No Yes Capitella sp. I   234 217
No Yes Danaus plexippus OGS1.0 Monarch butterfly 15 14
No Yes Heliconius melpomene Postman butterfly 12 12
No Yes Bombyx mori Domestic silkworm 11 11
No Yes Nasonia vitripennis Jewel wasp 9 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 16 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 14 13
No Yes Linepithema humile v1.1 Argentine ant 16 16
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 15 15
No Yes Solenopsis invicta v.2.2.3 Red fire ant 15 14
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 15 15
No Yes Atta cephalotes v1.1   14 14
No Yes Camponotus floridanus v3.3 Florida carpenter ant 15 15
No Yes Lucilia cuprina Australian sheep blowfly 9 9
No Yes Drosophila grimshawi 1.3   10 9
No Yes Drosophila willistoni 1.3   9 9
No Yes Drosophila pseudoobscura 2.13   11 10
No Yes Drosophila persimilis 1.3   10 9
No Yes Drosophila suzukii   10 10
No Yes Drosophila yakuba 1.3   11 10
No Yes Drosophila simulans 1.3   8 7
No Yes Drosophila sechellia 1.3   11 10
No Yes Drosophila melanogaster 76_5 Fruit fly 26 26
No Yes Drosophila erecta 1.3   10 10
No Yes Drosophila ananassae 1.3   11 10
No Yes Drosophila virilis 1.2   9 9
No Yes Drosophila mojavensis 1.3   9 8
No Yes Megaselia scalaris 22   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 12 12
No Yes Culex pipiens quinquefasciatus Southern house mosquito 14 14
No Yes Anopheles darlingi 22 American malaria mosquito 9 8
No Yes Anopheles gambiae 49_3j African malaria mosquito 11 11
No Yes Tribolium castaneum 3.0 Red flour beetle 15 14
No Yes Pediculus humanus corporis (Early assembly) Human body louse 13 13
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   11 11
No Yes Daphnia pulex Common water flea 13 12
No Yes Strigamia maritima 22   17 16
No Yes Sarcoptes scabiei   6 6
No Yes Tetranychus urticae Two-spotted spider mite 9 9
No Yes Ixodes scapularis (Preliminary) Black-legged tick 10 10
No Yes Pristionchus pacificus   8 8
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   11 11
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 22 22
No Yes Caenorhabditis japonica   8 8
No Yes Caenorhabditis brenneri   18 18
No Yes Caenorhabditis remanei   12 12
No Yes Caenorhabditis elegans 76_235 Roundworm 21 21
No Yes Caenorhabditis briggsae 2   9 9
No Yes Trichinella spiralis 22   7 7
No Yes Hymenolepis microstoma   5 5
No Yes Echinococcus multilocularis   6 6
No Yes Echinococcus granulosus   7 7
No Yes Taenia solium Pork tapeworm 7 7
No Yes Schistosoma mansoni   6 6
No Yes Mnemiopsis leidyi Sea walnut 11 10
No Yes Acropora digitifera v1.0   250 211
No Yes Nematostella vectensis 1.0 Starlet sea anemone 58 47
No Yes Hydra vulgaris   65 54
No Yes Amphimedon queenslandica   336 313
No Yes Trichoplax adhaerens   127 108
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 126 111
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 27 27
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 14 14
No Yes Ascaris suum Victoria/Ghent Pig roundworm 8 8
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 15 15
No Yes Homo sapiens 75_37 (old version GRC) Human 625 583
No Yes Homo sapiens (NCBI version) Human 194 169
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 93 87
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 10 10
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 10 10
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 10 10
No Yes Homo sapiens 69_37 Human 108 100
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 90 82
No Yes Gorilla gorilla 69_3.1 Western gorilla 86 80
No Yes Pongo abelii 69_2 Sumatran orangutan 83 75
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 83 74
No Yes Macaca mulatta 69_1 Rhesus monkey 84 78
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 86 77
No Yes Otolemur garnettii 69_3 Small-eared galago 84 76
No Yes Microcebus murinus 69_1 Gray mouse lemur 66 60
No Yes Rattus norvegicus 69_3.4 Norway rat 83 77
No Yes Mus musculus 69_38 House mouse 93 86
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 65 62
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 77 69
No Yes Cavia porcellus 69_3 Domestic guinea pig 66 59
No Yes Oryctolagus cuniculus 69_2 Rabbit 70 65
No Yes Ochotona princeps 69 American pika 65 60
No Yes Tupaia belangeri 69 Northern tree shrew 51 49
No Yes Sus scrofa 69_10.2 Pig 80 74
No Yes Bos taurus 69_3.1 Cattle 76 70
No Yes Vicugna pacos 69_1 Alpaca 41 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 69 62
No Yes Mustela putorius furo 69_1.0 Domestic ferret 78 70
No Yes Ailuropoda melanoleuca 69_1 Giant panda 80 71
No Yes Canis familiaris 69_3.1 Dog 83 74
No Yes Felis catus 69 Domestic cat 57 52
No Yes Equus caballus 69_2 Horse 77 70
No Yes Myotis lucifugus 69_2.0 Little brown bat 81 74
No Yes Pteropus vampyrus 69_1 Large flying fox 69 65
No Yes Sorex araneus 69_1 European shrew 46 40
No Yes Erinaceus europaeus 69 Western European hedgehog 50 44
No Yes Procavia capensis 69_1 Cape rock hyrax 58 53
No Yes Loxodonta africana 69_3 African savanna elephant 78 70
No Yes Echinops telfairi 69 Small Madagascar hedgehog 50 48
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 58 53
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 37 35
No Yes Macropus eugenii 69_1.0 Tammar wallaby 60 55
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 69 64
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 79 71
No Yes Ornithorhynchus anatinus 69_5 Platypus 56 49
No Yes Petromyzon marinus 69_7.0 Sea lamprey 22 20
No Yes Meleagris gallopavo 69_2 Turkey 63 56
No Yes Gallus gallus 69_2 Chicken 55 49
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 55 50
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 70 63
No Yes Anolis carolinensis 69_2.0 Green anole 50 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 66 58
No Yes Latimeria chalumnae 69_1 Coelacanth 73 65
No Yes Gadus morhua 69_1 Atlantic cod 66 62
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 56 52
No Yes Takifugu rubripes 69_4 Torafugu 66 60
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 94 85
No Yes Oryzias latipes 69_1 Japanese medaka 57 55
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 83 76
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 87 79
No Yes Danio rerio 69_9 Zebrafish 130 119
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 15 15
No Yes Ciona intestinalis 69 Vase tunicate 25 22
No Yes Drosophila melanogaster 69_5 Fruit fly 10 10
No Yes Caenorhabditis elegans 69_215 Roundworm 9 9
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   48705 43517
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3440 2843
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   24966 22625
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   21 19
No Yes PDB chains (SCOP 1.75) (PDB)   25 25
No Yes Protein Data Bank (all PDB sequenc)   460 435
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   583 583
No Yes TargetDB (Targets)   202 181
No Yes UniProt viral sequences (Viral)   45 42

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