SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Cavia porcellus 69_3 > Serine protease inhibitors domains


Serine protease inhibitors superfamily domain assignments
in
Cavia porcellus 69_3

Assignment details

(show help)


Cavia porcellus 69_3 has 57 significant domains in 16 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000002004   0.000000018   588-643   BSTI  
ENSCPOP00000002554   0.000000245   778-848   BSTI  
  0.000000932   885-949   ATI-like  
  0.0000278   2358-2421   BSTI  
  0.0000785   426-476   BSTI  
  0.00425   1410-1463   ATI-like  
ENSCPOP00000004385   0.0000000229   1457-1522   ATI-like  
ENSCPOP00000010833   0.000000000157   594-652   BSTI  
  0.000000000589   975-1034   BSTI  
  0.00000000114   1364-1423   ATI-like  
ENSCPOP00000013050   0.000000000834   1647-1707   ATI-like  
  0.00000000376   2035-2100   ATI-like  
  0.000000491   1266-1310   BSTI  
  0.0000018   886-938   ATI-like  
ENSCPOP00000013464   0.000000000406   265-322   BSTI  
  0.00000000353   726-793   ATI-like  
  0.0000000127   624-687   ATI-like  
ENSCPOP00000013681   0.00000000101   1273-1336   ATI-like  
  0.00000000706   3089-3146   BSTI  
  0.0000000249   466-528   BSTI  
  0.0000000576   4819-4877   BSTI  
  0.000000314   1815-1874   ATI-like  
  0.00000034   828-882   ATI-like  
  0.000000589   4054-4113   BSTI  
  0.000000654   4926-4990   ATI-like  
  0.00000157   4679-4728   BSTI  
  0.00000213   2630-2679   ATI-like  
  0.00000425   3311-3362   BSTI  
  0.00000432   4422-4478   ATI-like  
  0.0000768   925-979   ATI-like  
  0.000288   3687-3744   BSTI  
  0.000507   3519-3578   ATI-like  
  0.00425   2883-2948   BSTI  
ENSCPOP00000014866   0.0000000343   671-728   BSTI  
  0.000000818   1690-1750   BSTI  
  0.0000491   312-372   ATI-like  
  0.00015   1268-1321   BSTI  
  0.000899   769-833   ATI-like  
ENSCPOP00000015349   0.00000000000484   274-332   BSTI  
  0.000000000615   641-702   BSTI  
  0.000000497   747-805   ATI-like  
  0.0000687   1115-1170   BSTI  
ENSCPOP00000016609   0.00000000000209   288-345   BSTI  
  0.00000000353   654-714   BSTI  
  0.000000628   752-816   ATI-like  
  0.0017   1125-1181   BSTI  
ENSCPOP00000017141   0.00000000997   430-486   ATI-like  
ENSCPOP00000017333   0.00000000000157   647-709   ATI-like  
  0.000000000294   294-348   BSTI  
  0.0000000638   772-828   ATI-like  
  0.000000392   2197-2254   BSTI  
  0.0000229   1142-1195   ATI-like  
ENSCPOP00000018163   0.000000015   435-490   BSTI  
ENSCPOP00000019350   0.0000000000118   331-389   BSTI  
  0.0000000000968   696-758   BSTI  
  0.00000000471   796-858   ATI-like  
  0.000343   1170-1223   BSTI  
ENSCPOP00000020577   0.0000000000458   1243-1303   ATI-like  
  0.0000000000899   438-498   ATI-like  
  0.000000000124   1625-1685   ATI-like  
  0.000000000523   45-105   BSTI  
  0.000000000867   857-915   ATI-like  
ENSCPOP00000020877   0.00000000327   718-782   ATI-like  
  0.00000000327   261-319   ATI-like  
  0.0000000899   617-680   ATI-like  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]

Add assignments from groups of genomes

View all assignments containing a Serine protease inhibitors domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]

Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   52301 52301
No Yes Homo sapiens 76_38 Human 96 29
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 32 7
No Yes Gorilla gorilla 76_3.1 Western gorilla 62 18
No Yes Pongo abelii 76_2 Sumatran orangutan 41 14
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 8
No Yes Papio anubis 76 Olive baboon 52 13
No Yes Macaca mulatta 76_1 Rhesus monkey 59 21
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 111 35
No Yes Otolemur garnettii 76_3 Small-eared galago 41 12
No Yes Microcebus murinus 76_1 Gray mouse lemur 19 10
No Yes Rattus norvegicus 76_5.0 Norway rat 61 16
No Yes Mus musculus 76_38 House mouse 172 34
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 10
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 75 13
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 37 14
No Yes Cavia porcellus 76_3 Domestic guinea pig 57 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 51 14
No Yes Ochotona princeps 76 American pika 26 12
No Yes Tupaia belangeri 76 Northern tree shrew 16 6
No Yes Sus scrofa 76_10.2 Pig 45 17
No Yes Bos taurus 76_3.1 Cattle 57 16
No Yes Ovis aries 76_3.1 Sheep 35 14
No Yes Vicugna pacos 76_1 Alpaca 6 4
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 35 13
No Yes Mustela putorius furo 76_1.0 Domestic ferret 58 15
No Yes Ailuropoda melanoleuca 76_1 Giant panda 62 16
No Yes Canis familiaris 76_3.1 Dog 72 17
No Yes Felis catus 76_6.2 Domestic cat 61 16
No Yes Equus caballus 76_2 Horse 81 17
No Yes Myotis lucifugus 76_2.0 Little brown bat 35 13
No Yes Pteropus vampyrus 76_1 Large flying fox 33 13
No Yes Sorex araneus 76_1 European shrew 9 4
No Yes Erinaceus europaeus 76 Western European hedgehog 11 5
No Yes Procavia capensis 76_1 Cape rock hyrax 24 10
No Yes Loxodonta africana 76_3 African savanna elephant 50 19
No Yes Echinops telfairi 76 Small Madagascar hedgehog 9 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 54 15
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 8 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 22 10
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 62 20
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 53 14
No Yes Ornithorhynchus anatinus 76_5 Platypus 41 26
No Yes Saccoglossus kowalevskii v3.0   135 62
No Yes Petromyzon marinus 76_7.0 Sea lamprey 65 16
No Yes Meleagris gallopavo 76_2 Turkey 59 22
No Yes Gallus gallus 76_4 Chicken 62 15
No Yes Anas platyrhynchos 76_1.0 Mallard 47 17
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 55 22
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 48 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 95 26
No Yes Anolis carolinensis 76_2.0 Green anole 99 23
No Yes Xenopus laevis African clawed frog 50 24
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 172 69
No Yes Latimeria chalumnae 76_1 Coelacanth 84 23
No Yes Lepisosteus oculatus 76 Spotted gar 118 30
No Yes Gadus morhua 76_1 Atlantic cod 64 18
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 47 20
No Yes Takifugu rubripes 76_4 Torafugu 116 42
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 103 38
No Yes Oryzias latipes 76_1 Japanese medaka 68 22
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 53 14
No Yes Poecilia formosa 76 Amazon molly 69 21
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 99 27
No Yes Astyanax mexicanus 76 Mexican tetra 56 15
No Yes Danio rerio 76_9 Zebrafish 117 41
No Yes Oikopleura dioica   53 24
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 65 30
No Yes Ciona intestinalis 76 Vase tunicate 39 19
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 68 29
No Yes Adineta vaga   45 23
No Yes Octopus bimaculoides 280   59 36
No Yes Crassostrea gigas 22 Pacific oyster 25 12
No Yes Lottia gigantea Owl limpet 7 7
No Yes Helobdella robusta   5 3
No Yes Capitella sp. I   39 27
No Yes Danaus plexippus OGS1.0 Monarch butterfly 38 16
No Yes Heliconius melpomene Postman butterfly 27 14
No Yes Bombyx mori Domestic silkworm 48 23
No Yes Nasonia vitripennis Jewel wasp 11 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 13 9
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 8 4
No Yes Linepithema humile v1.1 Argentine ant 8 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 8 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 3
No Yes Atta cephalotes v1.1   6 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 2
No Yes Lucilia cuprina Australian sheep blowfly 14 7
No Yes Drosophila grimshawi 1.3   6 3
No Yes Drosophila willistoni 1.3   10 4
No Yes Drosophila pseudoobscura 2.13   17 10
No Yes Drosophila persimilis 1.3   11 6
No Yes Drosophila suzukii   10 6
No Yes Drosophila yakuba 1.3   9 6
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   8 5
No Yes Drosophila melanogaster 76_5 Fruit fly 15 9
No Yes Drosophila erecta 1.3   8 5
No Yes Drosophila ananassae 1.3   7 4
No Yes Drosophila virilis 1.2   6 3
No Yes Drosophila mojavensis 1.3   7 4
No Yes Megaselia scalaris 22   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 27 23
No Yes Culex pipiens quinquefasciatus Southern house mosquito 26 17
No Yes Anopheles darlingi 22 American malaria mosquito 11 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 31 27
No Yes Tribolium castaneum 3.0 Red flour beetle 9 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 1
No Yes Acyrthosiphon pisum Pea aphid 5 1
No Yes Rhodnius prolixus 22   5 1
No Yes Daphnia pulex Common water flea 5 2
No Yes Strigamia maritima 22   6 2
No Yes Sarcoptes scabiei   43 19
No Yes Tetranychus urticae Two-spotted spider mite 20 11
No Yes Ixodes scapularis (Preliminary) Black-legged tick 52 39
No Yes Pristionchus pacificus   53 29
No Yes Meloidogyne incognita Southern root-knot nematode 10 8
No Yes Meloidogyne hapla   13 10
No Yes Onchocerca volvulus 22   13 8
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 10 5
No Yes Caenorhabditis japonica   26 14
No Yes Caenorhabditis brenneri   64 36
No Yes Caenorhabditis remanei   41 22
No Yes Caenorhabditis elegans 76_235 Roundworm 94 37
No Yes Caenorhabditis briggsae 2   52 28
No Yes Trichinella spiralis 22   12 7
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 32 18
No Yes Acropora digitifera v1.0   4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 4
No Yes Hydra vulgaris   14 7
No Yes Amphimedon queenslandica   17 10
No Yes Trichoplax adhaerens   3 1
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 162 56
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 9 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 32 29
No Yes Ascaris suum Victoria/Ghent Pig roundworm 35 16
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 72 29
No Yes Homo sapiens 75_37 (old version GRC) Human 101 31
No Yes Homo sapiens (NCBI version) Human 79 19
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 87 15
No Yes Heliconius numata (Incomplete)   16 15
No Yes Loa loa v3.3 (Request) Eye worm 8 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 10 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 6 3
No Yes Homo sapiens 69_37 Human 48 12
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 32 7
No Yes Gorilla gorilla 69_3.1 Western gorilla 45 12
No Yes Pongo abelii 69_2 Sumatran orangutan 41 14
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 22 8
No Yes Macaca mulatta 69_1 Rhesus monkey 43 15
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 44 12
No Yes Otolemur garnettii 69_3 Small-eared galago 41 12
No Yes Microcebus murinus 69_1 Gray mouse lemur 19 10
No Yes Rattus norvegicus 69_3.4 Norway rat 53 12
No Yes Mus musculus 69_38 House mouse 90 16
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 10
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 43 10
No Yes Cavia porcellus 69_3 Domestic guinea pig 57 16
No Yes Oryctolagus cuniculus 69_2 Rabbit 43 12
No Yes Ochotona princeps 69 American pika 26 12
No Yes Tupaia belangeri 69 Northern tree shrew 16 6
No Yes Sus scrofa 69_10.2 Pig 31 10
No Yes Bos taurus 69_3.1 Cattle 50 12
No Yes Vicugna pacos 69_1 Alpaca 6 4
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 35 13
No Yes Mustela putorius furo 69_1.0 Domestic ferret 57 14
No Yes Ailuropoda melanoleuca 69_1 Giant panda 61 15
No Yes Canis familiaris 69_3.1 Dog 51 13
No Yes Felis catus 69 Domestic cat 31 14
No Yes Equus caballus 69_2 Horse 51 13
No Yes Myotis lucifugus 69_2.0 Little brown bat 33 11
No Yes Pteropus vampyrus 69_1 Large flying fox 33 13
No Yes Sorex araneus 69_1 European shrew 9 4
No Yes Erinaceus europaeus 69 Western European hedgehog 11 5
No Yes Procavia capensis 69_1 Cape rock hyrax 24 10
No Yes Loxodonta africana 69_3 African savanna elephant 40 15
No Yes Echinops telfairi 69 Small Madagascar hedgehog 9 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 6
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 8 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 22 10
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 51 15
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 52 13
No Yes Ornithorhynchus anatinus 69_5 Platypus 39 24
No Yes Petromyzon marinus 69_7.0 Sea lamprey 49 14
No Yes Meleagris gallopavo 69_2 Turkey 49 17
No Yes Gallus gallus 69_2 Chicken 49 13
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 40 16
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 76 21
No Yes Anolis carolinensis 69_2.0 Green anole 95 21
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 155 57
No Yes Latimeria chalumnae 69_1 Coelacanth 66 18
No Yes Gadus morhua 69_1 Atlantic cod 56 15
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 41 16
No Yes Takifugu rubripes 69_4 Torafugu 47 15
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 75 23
No Yes Oryzias latipes 69_1 Japanese medaka 50 15
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 53 14
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 78 20
No Yes Danio rerio 69_9 Zebrafish 70 21
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 41 19
No Yes Ciona intestinalis 69 Vase tunicate 39 19
No Yes Drosophila melanogaster 69_5 Fruit fly 10 7
No Yes Caenorhabditis elegans 69_215 Roundworm 39 21
No Yes NCBI 2017_08 genome   20744 6687
No Yes STRING v9.0.5 (STRING)   2138 876
No Yes Uniprot 2018_03 genome   16723 7229
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   15 15
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   34 34
No Yes TargetDB (Targets)   38 20
No Yes UniProt viral sequences (Viral)   8 8

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.