Select to display Genome Domains Proteins No ALL 10651 10651 No Homo sapiens 76_38 Human 25 25 No Pan troglodytes 76_2.1.4 Chimpanzee 2 2 No Gorilla gorilla 76_3.1 Western gorilla 9 9 No Pongo abelii 76_2 Sumatran orangutan 4 4 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2 No Papio anubis 76 Olive baboon 1 1 No Macaca mulatta 76_1 Rhesus monkey 6 6 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 15 15 No Otolemur garnettii 76_3 Small-eared galago 2 2 No Microcebus murinus 76_1 Gray mouse lemur 1 1 No Rattus norvegicus 76_5.0 Norway rat 5 5 No Mus musculus 76_38 House mouse 11 11 No Dipodomys ordii 76_1 Ord's kangaroo rat 1 1 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 3 3 No Heterocephalus glaber v1.7-2 Naked mole-rat 2 2 No Cavia porcellus 76_3 Domestic guinea pig 2 2 No Oryctolagus cuniculus 76_2 Rabbit 1 1 No Tupaia belangeri 76 Northern tree shrew 1 1 No Sus scrofa 76_10.2 Pig 3 3 No Bos taurus 76_3.1 Cattle 2 2 No Ovis aries 76_3.1 Sheep 5 5 No Tursiops truncatus 76_1 Bottlenose dolphin 2 2 No Mustela putorius furo 76_1.0 Domestic ferret 3 3 No Ailuropoda melanoleuca 76_1 Giant panda 2 2 No Canis familiaris 76_3.1 Dog 4 4 No Felis catus 76_6.2 Domestic cat 2 2 No Equus caballus 76_2 Horse 2 2 No Myotis lucifugus 76_2.0 Little brown bat 2 2 No Pteropus vampyrus 76_1 Large flying fox 2 2 No Sorex araneus 76_1 European shrew 1 1 No Erinaceus europaeus 76 Western European hedgehog 1 1 No Procavia capensis 76_1 Cape rock hyrax 2 2 No Loxodonta africana 76_3 African savanna elephant 2 2 No Echinops telfairi 76 Small Madagascar hedgehog 1 1 No Dasypus novemcinctus 76_2 Nine-banded armadillo 5 5 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1 No Macropus eugenii 76_1.0 Tammar wallaby 1 1 No Sarcophilus harrisii 76_7.0 Tasmanian devil 3 3 No Monodelphis domestica 76_5 Gray short-tailed opossum 3 3 No Ornithorhynchus anatinus 76_5 Platypus 2 2 No Saccoglossus kowalevskii v3.0 4 4 No Petromyzon marinus 76_7.0 Sea lamprey 1 1 No Meleagris gallopavo 76_2 Turkey 3 3 No Gallus gallus 76_4 Chicken 2 2 No Anas platyrhynchos 76_1.0 Mallard 2 2 No Taeniopygia guttata 76_3.2.4 Zebra finch 2 2 No Ficedula albicollis 76_1.0 Collared flycatcher 2 2 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3 No Anolis carolinensis 76_2.0 Green anole 4 4 No Xenopus laevis African clawed frog 14 14 No Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4 No Latimeria chalumnae 76_1 Coelacanth 3 3 No Lepisosteus oculatus 76 Spotted gar 1 1 No Gadus morhua 76_1 Atlantic cod 2 2 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 4 4 No Takifugu rubripes 76_4 Torafugu 12 12 No Gasterosteus aculeatus 76_1 Three-spined stickleback 4 4 No Oryzias latipes 76_1 Japanese medaka 7 7 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4 No Poecilia formosa 76 Amazon molly 3 3 No Oreochromis niloticus 76_1.0 Nile tilapia 6 6 No Astyanax mexicanus 76 Mexican tetra 1 1 No Danio rerio 76_9 Zebrafish 10 10 No Oikopleura dioica 6 6 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2 No Ciona intestinalis 76 Vase tunicate 1 1 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 2 2 No Adineta vaga 9 9 No Octopus bimaculoides 280 2 2 No Crassostrea gigas 22 Pacific oyster 3 3 No Lottia gigantea Owl limpet 2 2 No Helobdella robusta 2 2 No Capitella sp. I 3 3 No Danaus plexippus OGS1.0 Monarch butterfly 2 2 No Heliconius melpomene Postman butterfly 2 2 No Bombyx mori Domestic silkworm 2 2 No Nasonia vitripennis Jewel wasp 2 2 No Apis mellifera 38.2d (Not maintained) Honey bee 3 3 No Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2 No Linepithema humile v1.1 Argentine ant 3 3 No Pogonomyrmex barbatus v1.2 Red harvester ant 2 2 No Solenopsis invicta v.2.2.3 Red fire ant 3 3 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1 No Atta cephalotes v1.1 1 1 No Camponotus floridanus v3.3 Florida carpenter ant 2 2 No Lucilia cuprina Australian sheep blowfly 2 2 No Drosophila grimshawi 1.3 2 2 No Drosophila willistoni 1.3 2 2 No Drosophila pseudoobscura 2.13 4 4 No Drosophila persimilis 1.3 3 3 No Drosophila suzukii 2 2 No Drosophila yakuba 1.3 2 2 No Drosophila simulans 1.3 2 2 No Drosophila sechellia 1.3 2 2 No Drosophila melanogaster 76_5 Fruit fly 3 3 No Drosophila erecta 1.3 2 2 No Drosophila ananassae 1.3 2 2 No Drosophila virilis 1.2 1 1 No Drosophila mojavensis 1.3 1 1 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3 No Culex pipiens quinquefasciatus Southern house mosquito 2 2 No Anopheles darlingi 22 American malaria mosquito 2 2 No Anopheles gambiae 49_3j African malaria mosquito 3 3 No Tribolium castaneum 3.0 Red flour beetle 2 2 No Pediculus humanus corporis Human body louse 2 2 No Acyrthosiphon pisum Pea aphid 1 1 No Rhodnius prolixus 22 2 2 No Daphnia pulex Common water flea 1 1 No Strigamia maritima 22 2 2 No Sarcoptes scabiei 2 2 No Tetranychus urticae Two-spotted spider mite 2 2 No Ixodes scapularis Black-legged tick 2 2 No Pristionchus pacificus 2 2 No Meloidogyne incognita Southern root-knot nematode 2 2 No Meloidogyne hapla 1 1 No Onchocerca volvulus 22 3 3 No Brugia malayi WS250 Agent of lymphatic filariasis 3 3 No Caenorhabditis japonica 2 2 No Caenorhabditis brenneri 2 2 No Caenorhabditis remanei 2 2 No Caenorhabditis elegans 76_235 Roundworm 5 5 No Caenorhabditis briggsae 2 2 2 No Trichinella spiralis 22 1 1 No Hymenolepis microstoma 2 2 No Echinococcus multilocularis 2 2 No Echinococcus granulosus 2 2 No Taenia solium Pork tapeworm 2 2 No Schistosoma mansoni 2 2 No Mnemiopsis leidyi Sea walnut 2 2 No Thelohanellus kitauei 1 1 No Acropora digitifera v1.0 2 2 No Nematostella vectensis 1.0 Starlet sea anemone 2 2 No Hydra vulgaris 3 3 No Amphimedon queenslandica 2 2 No Trichoplax adhaerens 2 2 No Capsaspora owczarzaki ATCC 30864 2 2 No Mortierella verticillata NRRL 6337 2 2 No Phycomyces blakesleeanus 4 4 No Rhizopus oryzae RA 99-880 4 4 No Mucor circinelloides 2 2 No Rhizomucor miehei CAU432 2 2 No Malassezia globosa CBS 7966 2 2 No Sporisorium reilianum 22 1 1 No Ustilago maydis 1 1 No Mixia osmundae IAM 14324 v1.0 1 1 No Cronartium quercuum f. sp. fusiforme G11 v1.0 1 1 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 1 1 No Melampsora laricis-populina 1 1 No Rhodotorula graminis WP1 v1.0 1 1 No Sporobolomyces roseus IAM 13481 1 1 No Microbotryum violaceum 22 1 1 No Wallemia sebi v1.0 1 1 No Sphaerobolus stellatus v1.0 1 1 No Piloderma croceum F 1598 v1.0 1 1 No Serpula lacrymans var. lacrymans S7.9 1 1 No Coniophora puteana 1 1 No Hydnomerulius pinastri v2.0 2 2 No Paxillus rubicundulus Ve08.2h10 v1.0 1 1 No Pisolithus microcarpus 441 v1.0 1 1 No Pisolithus tinctorius Marx 270 v1.0 1 1 No Scleroderma citrinum Foug A v1.0 1 1 No Coprinopsis cinerea okayama7 130 v3 1 1 No Pleurotus ostreatus Oyster mushroom 1 1 No Amanita thiersii Skay4041 v1.0 1 1 No Amanita muscaria Koide v1.0 Fly agaric 1 1 No Galerina marginata v1.0 1 1 No Hebeloma cylindrosporum h7 v2.0 1 1 No Laccaria bicolor S238N-H82 1 1 No Agaricus bisporus var. bisporus 1 1 No Schizophyllum commune 1 1 No Stereum hirsutum FP-91666 SS1 v1.0 1 1 No Heterobasidion annosum 1 1 No Gloeophyllum trabeum v1.0 1 1 No Punctularia strigosozonata v1.0 1 1 No Sebacina vermifera MAFF 305830 v1.0 2 2 No Fomitiporia mediterranea v1.0 1 1 No Tulasnella calospora AL13/4D v1.0 1 1 No Postia placenta 2 2 No Wolfiporia cocos MD-104 SS10 v1.0 1 1 No Fomitopsis pinicola v1.0 1 1 No Fomitopsis pinicola FP-58527 SS1 v3.0 1 1 No Phanerochaete chrysosporium RP-78 2.1 1 1 No Dichomitus squalens 1 1 No Trametes versicolor v1.0 1 1 No Tremella mesenterica Witches' butter 1 1 No Daldinia eschscholzii EC12 v1.0 1 1 No Apiospora montagnei NRRL 25634 v1.0 2 2 No Magnaporthe poae ATCC 64411 22 1 1 No Magnaporthe grisea 70-15 1 1 No Podospora anserina 1 1 No Sporotrichum thermophile ATCC 42464 1 1 No Thielavia terrestris NRRL 8126 1 1 No Chaetomium globosum CBS 148.51 1 1 No Neurospora tetrasperma 1 1 No Neurospora discreta FGSC 8579 1 1 No Neurospora crassa OR74A 1 1 No Cryphonectria parasitica Chestnut blight fungus 1 1 No Verticillium albo-atrum VaMs.102 1 1 No Verticillium dahliae VdLs.17 1 1 No Acremonium alcalophilum v 1.0 1 1 No Glomerella graminicola 22 1 1 No Fusarium graminearum 1 1 No Nectria haematococca mpVI 2 2 No Fusarium oxysporum f. sp. lycopersici 4286 1 1 No Fusarium verticillioides 7600 1 1 No Trichoderma asperellum CBS 433.97 v1.0 1 1 No Trichoderma atroviride 1 1 No Trichoderma citrinoviride v1.0 1 1 No Trichoderma reesei 1.2 1 1 No Trichoderma virens Gv29-8 2 2 No Trichoderma longibrachiatum ATCC 18648 v1.0 1 1 No Trichoderma harzianum CBS 226.95 v1.0 2 2 No Amorphotheca resinae v1.0 Creosote fungus 1 1 No Sclerotinia sclerotiorum 1 1 No Blumeria graminis 22 1 1 No Didymella exigua CBS 183.55 v1.0 1 1 No Leptosphaeria maculans 22 1 1 No Setosphaeria turcica v1.0 1 1 No Cochliobolus miyabeanus ATCC 44560 v1.0 1 1 No Cochliobolus victoriae FI3 v1.0 1 1 No Cochliobolus carbonum 26-R-13 v1.0 1 1 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1 No Alternaria brassicicola 2 2 No Cochliobolus lunatus m118 v2.0 1 1 No Pyrenophora teres f. teres 22 1 1 No Pyrenophora tritici-repentis 1 1 No Stagonospora nodorum 1 1 No Mycosphaerella graminicola IPO323 1 1 No Zasmidium cellare ATCC 36951 v1.0 1 1 No Dothistroma septosporum 1 1 No Septoria musiva v1.0 1 1 No Mycosphaerella fijiensis CIRAD86 1 1 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 1 1 No Paracoccidioides brasiliensis Pb18 1 1 No Coccidioides posadasii RMSCC 3488 1 1 No Coccidioides immitis RS 1 1 No Ajellomyces dermatitidis SLH14081 1 1 No Histoplasma capsulatum class NAmI strain WU24 1 1 No Microsporum canis CBS 113480 1 1 No Trichophyton equinum CBS 127.97 1 1 No Trichophyton verrucosum HKI 0517 1 1 No Arthroderma benhamiae CBS 112371 1 1 No Trichophyton tonsurans CBS 112818 1 1 No Trichophyton rubrum CBS 118892 1 1 No Uncinocarpus reesii 1704 1 1 No Aspergillus zonatus v1.0 1 1 No Penicillium chrysogenum Wisconsin 54-1255 1 1 No Penicillium chrysogenum v1.0 1 1 No Aspergillus acidus v1.0 1 1 No Aspergillus fumigatus Af293 1 1 No Aspergillus brasiliensis v1.0 1 1 No Aspergillus nidulans FGSC A4 1 1 No Aspergillus sydowii v1.0 1 1 No Aspergillus versicolor v1.0 1 1 No Aspergillus glaucus 1 1 No Aspergillus carbonarius ITEM 5010 1 1 No Neosartorya fischeri NRRL 181 1 1 No Aspergillus terreus NIH2624 1 1 No Aspergillus tubingensis v1.0 1 1 No Aspergillus wentii v1.0 1 1 No Aspergillus oryzae RIB40 1 1 No Aspergillus niger 22 1 1 No Aspergillus clavatus NRRL 1 1 1 No Penicillium marneffei ATCC 18224 1 1 No Tuber melanosporum Mel28 22 1 1 No Tuber melanosporum Vittad Perigord truffle 1 1 No Hansenula polymorpha v2.0 1 1 No Dekkera bruxellensis CBS 2499 v2.0 1 1 No Pichia membranifaciens v1.0 1 1 No Candida tanzawaensis NRRL Y-17324 v1.0 1 1 No Candida dubliniensis CD36 1 1 No Candida albicans SC5314 1 1 No Lodderomyces elongisporus NRRL YB-4239 1 1 No Babjeviella inositovora NRRL Y-12698 v1.0 1 1 No Pichia stipitis CBS 6054 1 1 No Hyphopichia burtonii NRRL Y-1933 v1.0 1 1 No Debaromyces hansenii 1 1 No Wickerhamomyces anomalus 1 1 No Pichia pastoris GS115 1 1 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 1 1 No Yarrowia lipolytica CLIB122 1 1 No Candida lusitaniae ATCC 42720 1 1 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 1 1 No Vanderwaltozyma polyspora DSM 70294 2 2 No Candida glabrata CBS138 1 1 No Kluyveromyces thermotolerans CBS 6340 1 1 No Lachancea kluyveri 1 1 No Kluyveromyces waltii 1 1 No Ashbya gossypii ATCC 10895 1 1 No Zygosaccharomyces rouxii 1 1 No Saccharomyces mikatae MIT 1 1 No Saccharomyces paradoxus MIT 1 1 No Saccharomyces cerevisiae 76 Baker's yeast 1 1 No Saccharomyces bayanus MIT 1 1 No Kluyveromyces lactis 1 1 No Schizosaccharomyces cryophilus OY26 22 1 1 No Schizosaccharomyces octosporus yFS286 1 1 No Schizosaccharomyces japonicus yFS275 1 1 No Schizosaccharomyces pombe Fission yeast 1 1 No Dictyostelium discoideum 3 3 No Dictyostelium purpureum 2 2 No Entamoeba dispar 1.2 2 2 No Entamoeba invadens 1.2 1 1 No Entamoeba histolytica 1 2 2 No Selaginella moellendorffii 2 2 No Pinus taeda Loblolly pine 7 6 No Picea abies Norway spruce 2 2 No Eucalyptus grandis v201 Rose gum 7 7 No Theobroma cacao B97-61/B2 v1 Cacao 2 2 No Gossypium raimondii v221 16 16 No Citrus clementina v165 8 7 No Citrus sinensis v154 Sweet orange 9 8 No Thellungiella halophila v173 3 3 No Brassica rapa Chiifu-401 1.2 Field mustard 11 9 No Capsella rubella v183 4 4 No Arabidopsis lyrata Lyrate rockcress 6 5 No Arabidopsis thaliana 10 Thale cress 5 5 No Carica papaya Papaya 2 2 No Medicago truncatula Barrel medic 7 7 No Phaseolus vulgaris v186 French bean 4 4 No Glycine max v109 Soybean 13 13 No Cucumis sativus v122 Cucumber 6 6 No Fragaria vesca Wild strawberry 2 2 No Malus domestica v196 Apple 16 16 No Prunus persica v139 Peach 4 4 No Linum usitatissimum v200 Flax 5 5 No Manihot esculenta v147 Cassava 7 7 No Populus trichocarpa v156 Black cottonwood 6 6 No Vitis vinifera Wine grape 2 2 No Mimulus guttatus v140 Spotted monkey flower 7 7 No Solanum lycopersicum v.2.3 Tomato 3 3 No Solanum tuberosum Potato 4 4 No Actinidia chinensis Hongyang 4 4 No Aquilegia coerulea v195 4 4 No Triticum urartu 22 4 4 No Triticum aestivum 22 Bread wheat 12 12 No Aegilops tauschii 22 2 2 No Brachypodium distachyon Stiff brome 10 10 No Oryza barthii 22 African wild rice 3 3 No Oryza meridionalis 22 5 5 No Oryza glumaepatula 22 3 3 No Oryza glaberrima African rice 2 2 No Oryza punctata 22 6 6 No Oryza nivara 22 4 4 No Oryza brachyantha 22 Malo sina 3 3 No Oryza sativa ssp. japonica 5.0 Japanese rice 5 5 No Oryza sativa v193 Rice 3 3 No Phyllostachys heterocycla var. pubescens Kikko-chiku 3 3 No Panicum virgatum v202 Switchgrass 6 6 No Setaria italica v164 Foxtail millet 2 2 No Zea mays subsp. mays Maize 9 9 No Zea mays v181 Maize 9 9 No Sorghum bicolor Sorghum 3 3 No Musa balbisiana Balbis banana 3 3 No Musa acuminata 22 Wild Malaysian banana 3 3 No Amborella trichopoda 22 3 3 No Physcomitrella patens 3 3 No Coccomyxa subellipsoidea sp. C-169 v2 1 1 No Asterochloris sp. Cgr/DA1pho v1.0 1 1 No Chlorella vulgaris 1 1 No Cyanidioschyzon merolae strain 10D 22 1 1 No Cyanidioschyzon merolae 1 1 No Thecamonas trahens ATCC 50062 1 1 No Giardia lamblia 2.3 1 1 No Cyanophora paradoxa 2 2 No Leishmania mexicana 2.4 3 3 No Leishmania major strain Friedlin 3 3 No Leishmania infantum JPCM5 2.4 3 3 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 4 4 No Trypanosoma vivax 2 2 No Trypanosoma cruzi strain CL Brener 1 1 No Trypanosoma congolense 2.4 1 1 No Trypanosoma brucei gambiense v4.1 2 2 No Trypanosoma brucei TREU927 v4.1 3 3 No Ectocarpus siliculosus 3 3 No Aureococcus anophagefferens 3 3 No Albugo laibachii 22 2 2 No Pythium vexans DAOM BR484 22 2 2 No Phytophthora ramorum 1.1 Sudden oak death agent 2 2 No Phytophthora sojae 1.1 2 2 No Phytophthora infestans T30-4 2 2 No Phytophthora capsici 2 2 No Hyaloperonospora arabidopsidis 22 3 3 No Phaeodactylum tricornutum CCAP 1055/1 3 3 No Paramecium tetraurelia 2 2 No Tetrahymena thermophila SB210 1 2 2 No Ichthyophthirius multifiliis strain G5 1 1 No Cryptosporidium hominis 1 1 No Cryptosporidium muris 1 1 No Cryptosporidium parvum Iowa II 1 1 No Neospora caninum 2 2 No Toxoplasma gondii VEG 2 2 No Toxoplasma gondii ME49 2 2 No Toxoplasma gondii GT1 2 2 No Babesia bovis T2Bo 2 2 No Theileria parva 1 1 No Theileria annulata 1 1 No Plasmodium falciparum 3D7 2 2 No Plasmodium vivax SaI-1 7.0 2 2 No Plasmodium knowlesi strain H 2 2 No Plasmodium yoelii ssp. yoelii 1 1 1 No Plasmodium chabaudi 2 2 No Plasmodium berghei ANKA 2 2 No Naegleria gruberi 1 1 No Trichomonas vaginalis 1 1 No Guillardia theta CCMP2712 v1.0 1 1 No Nanoarchaeum equitans Kin4-M 1 1 No Candidatus Caldiarchaeum subterraneum 1 1 No Cenarchaeum symbiosum A 1 1 No Candidatus Nitrosopumilus sp. AR2 1 1 No Nitrosopumilus maritimus SCM1 1 1 No Candidatus Korarchaeum cryptofilum OPF8 1 1 No Acidilobus saccharovorans 345-15 1 1 No Fervidicoccus fontis Kam940 1 1 No Pyrolobus fumarii 1A 1 1 No Hyperthermus butylicus DSM 5456 1 1 No Thermogladius cellulolyticus 1633 1 1 No Ignisphaera aggregans DSM 17230 1 1 No Aeropyrum pernix K1 1 1 No Ignicoccus hospitalis KIN4/I 1 1 No Thermosphaera aggregans DSM 11486 1 1 No Staphylothermus hellenicus DSM 12710 1 1 No Staphylothermus marinus F1 1 1 No Desulfurococcus fermentans DSM 16532 1 1 No Desulfurococcus kamchatkensis 1221n 1 1 No Desulfurococcus mucosus DSM 2162 1 1 No Metallosphaera cuprina Ar-4 1 1 No Metallosphaera sedula DSM 5348 1 1 No Acidianus hospitalis W1 1 1 No Sulfolobus tokodaii str. 7 1 1 No Sulfolobus islandicus Y.N.15.51 1 1 No Sulfolobus solfataricus P2 1 1 No Sulfolobus acidocaldarius DSM 639 1 1 No Thermofilum sp. 1910b 1 1 No Thermofilum pendens Hrk 5 1 1 No Vulcanisaeta moutnovskia 768-28 1 1 No Vulcanisaeta distributa DSM 14429 1 1 No Caldivirga maquilingensis IC-167 1 1 No Pyrobaculum sp. 1860 1 1 No Pyrobaculum calidifontis JCM 11548 1 1 No Pyrobaculum arsenaticum DSM 13514 1 1 No Pyrobaculum oguniense TE7 1 1 No Thermoproteus neutrophilus V24Sta 1 1 No Pyrobaculum aerophilum str. IM2 1 1 No Pyrobaculum islandicum DSM 4184 1 1 No Thermoproteus uzoniensis 768-20 1 1 No Thermoproteus tenax Kra 1 1 1 No halophilic archaeon DL31 1 1 No Methanocella arvoryzae MRE50 1 1 No Methanocella conradii HZ254 1 1 No Methanocella paludicola SANAE 1 1 No Methanosaeta harundinacea 6Ac 1 1 No Methanosaeta thermophila PT 1 1 No Methanosaeta concilii GP6 1 1 No Methanosalsum zhilinae DSM 4017 1 1 No Methanohalobium evestigatum Z-7303 1 1 No Methanococcoides burtonii DSM 6242 1 1 No Methanosarcina acetivorans C2A 1 1 No Methanosarcina mazei Go1 1 1 No Methanosarcina barkeri str. Fusaro 1 1 No Methanohalophilus mahii DSM 5219 1 1 No Methanosphaerula palustris E1-9c 1 1 No Methanoregula boonei 6A8 1 1 No Methanospirillum hungatei JF-1 1 1 No Methanocorpusculum labreanum Z 1 1 No Methanoplanus petrolearius DSM 11571 1 1 No Methanoculleus bourgensis MS2 1 1 No Methanoculleus marisnigri JR1 1 1 No Methanopyrus kandleri AV19 1 1 No Ferroglobus placidus DSM 10642 1 1 No Archaeoglobus profundus DSM 5631 1 1 No Archaeoglobus veneficus SNP6 1 1 No Archaeoglobus fulgidus DSM 4304 1 1 No Thermococcus sp. 4557 1 1 No Thermococcus onnurineus NA1 1 1 No Thermococcus kodakarensis KOD1 1 1 No Thermococcus gammatolerans EJ3 1 1 No Thermococcus sibiricus MM 739 1 1 No Thermococcus barophilus MP 1 1 No Pyrococcus sp. ST04 1 1 No Pyrococcus yayanosii CH1 1 1 No Pyrococcus horikoshii OT3 1 1 No Pyrococcus abyssi GE5 1 1 No Pyrococcus furiosus COM1 1 1 No Thermoplasmatales archaeon BRNA1 1 1 No Thermoplasma volcanium GSS1 1 1 No Thermoplasma acidophilum DSM 1728 1 1 No Picrophilus torridus DSM 9790 1 1 No Salinarchaeum sp. Harcht-Bsk1 1 1 No Halopiger xanaduensis SH-6 1 1 No Haloterrigena turkmenica DSM 5511 1 1 No Natrinema sp. J7-2 1 1 No Natrialba magadii ATCC 43099 1 1 No Halorubrum lacusprofundi ATCC 49239 1 1 No Haloquadratum walsbyi DSM 16790 1 1 No Halogeometricum borinquense DSM 11551 1 1 No Haloferax mediterranei ATCC 33500 1 1 No Haloferax volcanii DS2 1 1 No Halomicrobium mukohataei DSM 12286 1 1 No Halorhabdus utahensis DSM 12940 1 1 No Natronomonas pharaonis DSM 2160 1 1 No Haloarcula hispanica ATCC 33960 1 1 No Haloarcula marismortui ATCC 43049 1 1 No Halalkalicoccus jeotgali B3 1 1 No Halobacterium salinarum R1 1 1 No Halobacterium sp. NRC-1 1 1 No Methanotorris igneus Kol 5 1 1 No Methanocaldococcus sp. FS406-22 1 1 No Methanocaldococcus fervens AG86 1 1 No Methanocaldococcus vulcanius M7 1 1 No methanocaldococcus infernus ME 1 1 No Methanocaldococcus jannaschii DSM 2661 1 1 No Methanothermococcus okinawensis IH1 1 1 No Methanococcus aeolicus Nankai-3 1 1 No Methanococcus maripaludis C5 1 1 No Methanococcus voltae A3 1 1 No Methanococcus vannielii SB 1 1 No Methanothermus fervidus DSM 2088 1 1 No Methanothermobacter marburgensis str. Marburg 1 1 No Methanothermobacter thermautotrophicus str. Delta H 1 1 No Methanosphaera stadtmanae DSM 3091 1 1 No Methanobrevibacter sp. AbM4 1 1 No Methanobrevibacter ruminantium M1 1 1 No Methanobrevibacter smithii ATCC 35061 1 1 No Complete genome sequence of Methanobacterium sp. Mb1 1 1 No Aciduliprofundum sp. MAR08-339 1 1 No Aciduliprofundum boonei T469 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 6 6 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4 No Ascaris suum Victoria/Ghent Pig roundworm 2 2 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2 No Cryptococcus neoformans var. grubii H99 1 1 No Cryptococcus neoformans B-3501A 1 1 No Cryptococcus neoformans JEC21 1 1 No Paracoccidioides brasiliensis Pb01 1 1 No Paracoccidioides brasiliensis Pb03 1 1 No Coccidioides posadasii str. Silveira 1 1 No Coccidioides immitis RMSCC 3703 1 1 No Coccidioides immitis RMSCC 2394 1 1 No Coccidioides immitis H538.4 1 1 No Ajellomyces dermatitidis ER-3 1 1 No Histoplasma capsulatum H143 1 1 No Histoplasma capsulatum H88 1 1 No Histoplasma capsulatum G186AR 1 1 No Aspergillus fumigatus A1163 1 1 No Candida albicans WO-1 1 1 No Saccharomyces cerevisiae UC5 1 1 No Saccharomyces cerevisiae PW5 1 1 No Saccharomyces cerevisiae FL100 1 1 No Saccharomyces cerevisiae CLIB324 1 1 No Saccharomyces cerevisiae CBS7960 1 1 No Saccharomyces cerevisiae YJM269 1 1 No Saccharomyces cerevisiae T7 1 1 No Saccharomyces cerevisiae FostersB 1 1 No Saccharomyces cerevisiae FostersO 1 1 No Saccharomyces cerevisiae VL3 1 1 No Saccharomyces cerevisiae Vin13 1 1 No Saccharomyces cerevisiae LalvinQA23 1 1 No Saccharomyces cerevisiae AWRI796 1 1 No Saccharomyces cerevisiae Sigma1278b 1 1 No Saccharomyces cerevisiae W303 1 1 No Saccharomyces cerevisiae JAY291 1 1 No Saccharomyces cerevisiae AWRI1631 1 1 No Saccharomyces cerevisiae M22 1 1 No Saccharomyces cerevisiae CLIB215 1 1 No Saccharomyces cerevisiae YJM789 1 1 No Saccharomyces cerevisiae YJM789 1 1 No Saccharomyces cerevisiae RM11-1a 1 1 No Saccharomyces cerevisiae RM11-1a 1 1 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1 No Schizosaccharomyces pombe 972h- 1 1 No Batrachochytrium dendrobatidis JEL423 1 1 No Batrachochytrium dendrobatidis JAM81 1 1 No Theobroma cacao Matina 1-6 v0.9 Cacao 2 2 No Hordeum vulgare 22 Domesticated barley 3 3 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 3 No Trypanosoma brucei Lister 427 v4.1 3 3 No Neospora caninum Nc-Liverpool 6.2 2 2 No Plasmodium falciparum HB3 2 2 No Plasmodium falciparum Dd2 2 2 No Candidatus Nitrososphaera gargensis Ga9.2 1 1 No Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 1 1 No Caldisphaera lagunensis DSM 15908 1 1 No Aeropyrum camini SY1 = JCM 12091 1 1 No Sulfolobus islandicus LAL14/1 1 1 No Sulfolobus islandicus REY15A 1 1 No Sulfolobus islandicus HVE10/4 1 1 No Sulfolobus islandicus Y.G.57.14 1 1 No Sulfolobus islandicus L.S.2.15 1 1 No Sulfolobus islandicus M.16.27 1 1 No Sulfolobus islandicus M.14.25 1 1 No Sulfolobus islandicus M.16.4 1 1 No Sulfolobus islandicus L.D.8.5 1 1 No Sulfolobus solfataricus 98/2 1 1 No Sulfolobus acidocaldarius SUSAZ 1 1 No Sulfolobus acidocaldarius Ron12/I 1 1 No Sulfolobus acidocaldarius N8 1 1 No Methanomethylovorans hollandica DSM 15978 1 1 No Methanolobus psychrophilus R15 1 1 No Methanosarcina mazei Tuc01 1 1 No Methanoregula formicica Methanoregula formicicum SMSP 1 1 No Archaeoglobus sulfaticallidus PM70-1 1 1 No Thermococcus sp. AM4 1 1 No Thermococcus sp. CL1 1 1 No Thermococcus litoralis DSM 5473 1 1 No Pyrococcus sp. NA2 1 1 No Pyrococcus furiosus DSM 3638 1 1 No Candidatus Methanomethylophilus alvus Mx1201 1 1 No Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1 1 No Ferroplasma acidarmanus fer1 1 1 No Halovivax ruber XH-70 1 1 No Natrinema pellirubrum DSM 15624 1 1 No Natronococcus occultus SP4 1 1 No Natronobacterium gregoryi SP2 1 1 No Haloquadratum walsbyi C23 1 1 No Halorhabdus tiamatea SARL4B 1 1 No Natronomonas moolapensis 8.8.11 1 1 No Haloarcula hispanica N601 1 1 No Methanococcus maripaludis X1 1 1 No Methanococcus maripaludis C6 1 1 No Methanococcus maripaludis C7 1 1 No Methanococcus maripaludis S2 1 1 No Methanobacterium sp. SWAN-1 1 1 No Homo sapiens 75_37 (old version GRC) Human 18 18 No Homo sapiens Human 10 10 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2 No Heliconius numata 10 10 No Loa loa v3.3 (Request) Eye worm 2 2 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2 No Picea sitchensis Sitka spruce 1 1 No Lotus japonicus 2 2 No Malus x domestica (Duplicate) Apple 16 16 No Ricinus communis Castor bean 2 2 No Nicotiana benthamiana 0.4.4 (Early draft) 12 11 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 3 3 No Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3 No Phoenix dactylifera Date palm 3 3 No Homo sapiens 69_37 Human 2 2 No Pan troglodytes 69_2.1.4 Chimpanzee 2 2 No Gorilla gorilla 69_3.1 Western gorilla 9 9 No Pongo abelii 69_2 Sumatran orangutan 4 4 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2 No Macaca mulatta 69_1 Rhesus monkey 3 3 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 10 10 No Otolemur garnettii 69_3 Small-eared galago 2 2 No Microcebus murinus 69_1 Gray mouse lemur 1 1 No Rattus norvegicus 69_3.4 Norway rat 4 4 No Mus musculus 69_38 House mouse 2 2 No Dipodomys ordii 69_1 Ord's kangaroo rat 1 1 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 3 3 No Cavia porcellus 69_3 Domestic guinea pig 2 2 No Oryctolagus cuniculus 69_2 Rabbit 1 1 No Tupaia belangeri 69 Northern tree shrew 1 1 No Sus scrofa 69_10.2 Pig 2 2 No Bos taurus 69_3.1 Cattle 2 2 No Tursiops truncatus 69_1 Bottlenose dolphin 2 2 No Mustela putorius furo 69_1.0 Domestic ferret 3 3 No Ailuropoda melanoleuca 69_1 Giant panda 2 2 No Canis familiaris 69_3.1 Dog 4 4 No Felis catus 69 Domestic cat 2 2 No Equus caballus 69_2 Horse 2 2 No Myotis lucifugus 69_2.0 Little brown bat 2 2 No Pteropus vampyrus 69_1 Large flying fox 2 2 No Sorex araneus 69_1 European shrew 1 1 No Erinaceus europaeus 69 Western European hedgehog 1 1 No Procavia capensis 69_1 Cape rock hyrax 2 2 No Loxodonta africana 69_3 African savanna elephant 2 2 No Echinops telfairi 69 Small Madagascar hedgehog 1 1 No Dasypus novemcinctus 69_2 Nine-banded armadillo 3 3 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1 No Macropus eugenii 69_1.0 Tammar wallaby 1 1 No Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3 No Monodelphis domestica 69_5 Gray short-tailed opossum 2 2 No Ornithorhynchus anatinus 69_5 Platypus 2 2 No Petromyzon marinus 69_7.0 Sea lamprey 1 1 No Meleagris gallopavo 69_2 Turkey 2 2 No Gallus gallus 69_2 Chicken 2 2 No Taeniopygia guttata 69_3.2.4 Zebra finch 2 2 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2 No Anolis carolinensis 69_2.0 Green anole 2 2 No Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2 No Latimeria chalumnae 69_1 Coelacanth 2 2 No Gadus morhua 69_1 Atlantic cod 2 2 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4 No Takifugu rubripes 69_4 Torafugu 4 4 No Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4 No Oryzias latipes 69_1 Japanese medaka 4 4 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4 No Oreochromis niloticus 69_1.0 Nile tilapia 4 4 No Danio rerio 69_9 Zebrafish 3 3 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2 No Ciona intestinalis 69 Vase tunicate 1 1 No Drosophila melanogaster 69_5 Fruit fly 2 2 No Caenorhabditis elegans 69_215 Roundworm 1 1 No Saccharomyces cerevisiae 69_4 Baker's yeast 1 1 No Arabidopsis thaliana 10 Thale cress 4 4 No 1_050719N (meta-genome) 1 1 No 2_050719S (meta-genome) 4 4 No 3_050719R (meta-genome) 2 2 No 5_050719P (meta-genome) 1 1 No 6_Upper_euphotic (meta-genome) 2 2 No 7_Oxygen_minimum_layer (meta-genome) 1 1 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 1 1 No Bath Hot Springs, filamentous community (meta-genome) 1 1 No Bath Hot Springs, planktonic community (meta-genome) 3 3 No Core Eukaryotic Genes 458 (CEGMA) 6 6 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 1 1 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 1 1 No Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 14 14 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome) 9 9 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 10 10 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome) 10 10 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome) 6 6 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 8 8 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome) 7 7 No Human Gut Community Subject 7 (meta-genome) 2 2 No Human Gut Community Subject 8 (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 1 1 Yes NCBI 2017_08 genome 3447 3425 No Protozoadb 2010_08 (Protozoadb) 58 58 No simHC - Simulated High Complexity Metagenome (meta-genome) 1 1 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 1 1 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 2 2 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 1 1 No STRING v9.0.5 (STRING) 297 296 No Uniprot 2018_03 genome 4358 4345 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 7 7 No Global Ocean Sampling Expedition (GOS) 63 63 No PDB chains (SCOP 1.75 ) (PDB) 5 5 No Protein Data Bank (all PDB sequenc) 13 13 No SCOP2 SCOPe CATH ECOD (all domain sequ) 34 34 No TargetDB 13 13
