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RING/U-box superfamily domain assignments
in
Ochotona princeps 76

Assignment details

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Ochotona princeps 76 has 258 significant domains in 237 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000000058   0.00000000000025   12-62   RING finger domain, C3HC4  
ENSOPRP00000000099   0.00000000000000353   1132-1188   RING finger domain, C3HC4  
ENSOPRP00000000112   1.23e-18   537-600   RING finger domain, C3HC4  
ENSOPRP00000000178   0.0000000202   4383-4458   RING finger domain, C3HC4  
ENSOPRP00000000293   0.000000000000155   110-168   RING finger domain, C3HC4  
  0.00000000353   44-108   IBR domain  
ENSOPRP00000000351   0.00000000707   42-96   RING finger domain, C3HC4  
ENSOPRP00000000430   0.000000000000848   3-74   RING finger domain, C3HC4  
ENSOPRP00000000466   3.31e-20   14-85   RING finger domain, C3HC4  
ENSOPRP00000000526   0.000000000000734   276-326   RING finger domain, C3HC4  
ENSOPRP00000000675   0.00000000000000464   18-92   RING finger domain, C3HC4  
ENSOPRP00000000733   0.0000942   846-882   RING finger domain, C3HC4  
ENSOPRP00000000848   0.000000000306   33-81   RING finger domain, C3HC4  
ENSOPRP00000000938   3.8e-24   1217-1295   U-box  
ENSOPRP00000000943   0.0000000000000166   4-61   RING finger domain, C3HC4  
ENSOPRP00000000967   0.00000000000002   30-114   Zf-UBP  
ENSOPRP00000000972   0.00000813   13-44   RING finger domain, C3HC4  
ENSOPRP00000000999   3.06e-24   24-108   Zf-UBP  
ENSOPRP00000001239   2.16e-21   3-90   RING finger domain, C3HC4  
ENSOPRP00000001264   8.95e-17   6-78   RING finger domain, C3HC4  
ENSOPRP00000001280   3.98e-21   3-73   RING finger domain, C3HC4  
ENSOPRP00000001292   0.000000000000131   14-109   RING finger domain, C3HC4  
ENSOPRP00000001331   0.000000436   312-371   U-box  
ENSOPRP00000001730   0.000000000000312   14-68   RING finger domain, C3HC4  
ENSOPRP00000001743   1.19e-17   616-668   RING finger domain, C3HC4  
ENSOPRP00000001767   0.0000000000000311   60-113   Variant RING domain  
ENSOPRP00000001792   0.00000000324   26-64,112-147   RING finger domain, C3HC4  
  0.0297   149-199   ZZ domain  
ENSOPRP00000001811   5.52e-21   70-123   RING finger domain, C3HC4  
ENSOPRP00000001873   0.0000000188   114-157   Zf-UBP  
ENSOPRP00000001979   0.000000000736   2-51   RING finger domain, C3HC4  
ENSOPRP00000001996   7.83e-16   92-137   RING finger domain, C3HC4  
ENSOPRP00000002019   4.24e-16   618-668   RING finger domain, C3HC4  
ENSOPRP00000002032   7.44e-18   34-92   RING finger domain, C3HC4  
ENSOPRP00000002045   0.0000000245   327-382   RING finger domain, C3HC4  
ENSOPRP00000002342   0.00000000000283   88-142   RING finger domain, C3HC4  
  0.00023   10-61   IBR domain  
ENSOPRP00000002355   7.77e-25   389-472   U-box  
ENSOPRP00000002382   0.00000000000000318   2175-2227   RING finger domain, C3HC4  
ENSOPRP00000002520   0.00000000964   1740-1791   RING finger domain, C3HC4  
ENSOPRP00000002568   4.2e-19   7-78   RING finger domain, C3HC4  
ENSOPRP00000002680   5.42e-28   4-99   Zf-UBP  
ENSOPRP00000002774   0.000000000000589   42-95   RING finger domain, C3HC4  
ENSOPRP00000002807   0.0000000000000683   8-70   RING finger domain, C3HC4  
ENSOPRP00000002916   0.00000000000000151   2-88   RING finger domain, C3HC4  
  0.00212   106-161   ZZ domain  
ENSOPRP00000002992   9.06e-21   7-84   RING finger domain, C3HC4  
ENSOPRP00000003004   6.83e-23   4-73   RING finger domain, C3HC4  
ENSOPRP00000003015   3.53e-20   14-85   RING finger domain, C3HC4  
ENSOPRP00000003138   0.0000000656   22-76   RING finger domain, C3HC4  
ENSOPRP00000003160   0.00000000000133   473-532   RING finger domain, C3HC4  
  0.0000000000259   151-200   RING finger domain, C3HC4  
ENSOPRP00000003203   0.000000000000843   227-296   RING finger domain, C3HC4  
ENSOPRP00000003270   1.5e-19   8-77   RING finger domain, C3HC4  
ENSOPRP00000003453   0.000000000000795   14-69   RING finger domain, C3HC4  
ENSOPRP00000003508   0.000000759   16-64   ZZ domain  
ENSOPRP00000003558   2.59e-37   175-283   Zf-UBP  
ENSOPRP00000003847   0.00000000000212   419-474   RING finger domain, C3HC4  
ENSOPRP00000003929   4.42e-23   209-276   RING finger domain, C3HC4  
ENSOPRP00000003964   0.000000000000495   225-274   RING finger domain, C3HC4  
ENSOPRP00000003970   2.65e-18   126-178   RING finger domain, C3HC4  
ENSOPRP00000004017   0.0000000401   24-72   RING finger domain, C3HC4  
ENSOPRP00000004040   0.00000000000106   389-441   RING finger domain, C3HC4  
ENSOPRP00000004348   0.000000000000102   22-73   RING finger domain, C3HC4  
ENSOPRP00000004388   0.00000565   378-427   RING finger domain, C3HC4  
ENSOPRP00000004544   9.77e-27   2-93   Zf-UBP  
ENSOPRP00000004615   0.00000168   54-99   RING finger domain, C3HC4  
ENSOPRP00000004618   0.0000000238   156-202   U-box  
ENSOPRP00000004650   8.44e-19   4-77   RING finger domain, C3HC4  
ENSOPRP00000004685   0.0000000000406   432-486   RING finger domain, C3HC4  
  0.0000000000636   352-418   IBR domain  
ENSOPRP00000004958   0.0000115   1245-1285   RING finger domain, C3HC4  
ENSOPRP00000005006   0.0000131   107-155   RING finger domain, C3HC4  
ENSOPRP00000005034   0.000000253   142-218   RING finger domain, C3HC4  
ENSOPRP00000005096   4.12e-25   717-813   Zf-UBP  
ENSOPRP00000005144   2.03e-20   267-321   RING finger domain, C3HC4  
ENSOPRP00000005182   0.00000000000388   408-452   RING finger domain, C3HC4  
  0.000117   321-372   IBR domain  
ENSOPRP00000005322   0.0000000163   37-75   RING finger domain, C3HC4  
ENSOPRP00000005391   0.000000000000596   6-71   RING finger domain, C3HC4  
ENSOPRP00000005487   0.00000278   317-379   RING finger domain, C3HC4  
ENSOPRP00000005507   4.73e-17   2-63   ZZ domain  
  0.000442   737-780   RING finger domain, C3HC4  
  0.0161   803-836   RING finger domain, C3HC4  
ENSOPRP00000005536   0.00000000141   134-206   RING finger domain, C3HC4  
ENSOPRP00000005682   9.72e-19   8-81   RING finger domain, C3HC4  
ENSOPRP00000005702   0.00000000662   306-369   RING finger domain, C3HC4  
ENSOPRP00000005768   8.01e-23   8-79   RING finger domain, C3HC4  
ENSOPRP00000005790   0.00000000000141   9-66   RING finger domain, C3HC4  
ENSOPRP00000005791   1.55e-20   201-259   RING finger domain, C3HC4  
ENSOPRP00000005794   2.03e-20   7-84   RING finger domain, C3HC4  
ENSOPRP00000005799   1.66e-22   6-80   RING finger domain, C3HC4  
ENSOPRP00000005810   0.000000000303   7-63   RING finger domain, C3HC4  
ENSOPRP00000005862   7.71e-20   284-387   RING finger domain, C3HC4  
ENSOPRP00000005956   0.00000161   26-59,94-101   RING finger domain, C3HC4  
ENSOPRP00000005968   1.6e-16   938-981   RING finger domain, C3HC4  
ENSOPRP00000006004   1.31e-22   18-91   RING finger domain, C3HC4  
ENSOPRP00000006018   1.2e-16   155-216   RING finger domain, C3HC4  
ENSOPRP00000006081   0.00000000000000198   42-97   Variant RING domain  
ENSOPRP00000006082   1.88e-23   8-91   Zf-UBP  
ENSOPRP00000006132   3.98e-17   12-83   RING finger domain, C3HC4  
ENSOPRP00000006161   3.81e-40   20-105   RING finger domain, C3HC4  
ENSOPRP00000006264   9.42e-21   219-297   ZZ domain  
ENSOPRP00000006420   1.62e-19   97-143   RING finger domain, C3HC4  
ENSOPRP00000006520   0.000000000000262   23-81   RING finger domain, C3HC4  
ENSOPRP00000006653   8.35e-19   392-492   RING finger domain, C3HC4  
ENSOPRP00000006737   0.000000858   301-346   RING finger domain, C3HC4  
ENSOPRP00000006781   0.00000000000000306   27-110   RING finger domain, C3HC4  
  0.00000000000153   189-228   RING finger domain, C3HC4  
  0.0000000971   103-168   IBR domain  
ENSOPRP00000007071   0.000000000167   28-80   RING finger domain, C3HC4  
ENSOPRP00000007223   0.0000000383   190-244   RING finger domain, C3HC4  
ENSOPRP00000007275   0.00000000000000214   16-91   RING finger domain, C3HC4  
ENSOPRP00000007317   0.000000000503   625-685   IBR domain  
  0.00000441   542-622   RING finger domain, C3HC4  
ENSOPRP00000007378   1.28e-19   529-597   RING finger domain, C3HC4  
ENSOPRP00000007492   0.0000000000000541   149-195   RING finger domain, C3HC4  
ENSOPRP00000007735   0.0000000000000021   269-314   RING finger domain, C3HC4  
ENSOPRP00000007738   4.62e-34   28-110   RING finger domain, C3HC4  
ENSOPRP00000007909   0.0000000000274   2-48   U-box  
ENSOPRP00000007961   0.0000000000000131   10-71   RING finger domain, C3HC4  
ENSOPRP00000007994   0.0000000000000934   199-266   RING finger domain, C3HC4  
ENSOPRP00000008173   0.0000000000000033   111-177   RING finger domain, C3HC4  
ENSOPRP00000008246   6.24e-16   1-57   ZZ domain  
ENSOPRP00000008251   7.73e-19   6-76   RING finger domain, C3HC4  
ENSOPRP00000008293   0.0000000000404   35-107   RING finger domain, C3HC4  
ENSOPRP00000008295   0.0000000000353   330-390   RING finger domain, C3HC4  
  0.0000847   249-289   ZZ domain  
  0.0314   165-210   RING finger domain, C3HC4  
ENSOPRP00000008308   1.59e-45   21-115   RING finger domain, C3HC4  
ENSOPRP00000008426   4.42e-18   61-125   RING finger domain, C3HC4  
ENSOPRP00000008465   0.000000000104   56-113   RING finger domain, C3HC4  
ENSOPRP00000008539   0.00000000000306   169-217   RING finger domain, C3HC4  
ENSOPRP00000008726   0.0000212   598-652   RING finger domain, C3HC4  
ENSOPRP00000008743   0.0000000000117   798-856   RING finger domain, C3HC4  
ENSOPRP00000008750   0.0000000000233   72-121   RING finger domain, C3HC4  
ENSOPRP00000008773   0.0000087   479-521   RING finger domain, C3HC4  
ENSOPRP00000008783   5.59e-16   126-206   RING finger domain, C3HC4  
  0.000000000000578   293-348   RING finger domain, C3HC4  
  0.00000000000177   197-266   IBR domain  
ENSOPRP00000008803   9.27e-16   231-287   Variant RING domain  
ENSOPRP00000008842   0.00000000000000398   93-147   RING finger domain, C3HC4  
ENSOPRP00000008864   0.00000406   440-488   RING finger domain, C3HC4  
ENSOPRP00000008952   5.18e-19   545-631   ZZ domain  
ENSOPRP00000008982   0.00000000656   270-336   RING finger domain, C3HC4  
ENSOPRP00000009025   0.00000000636   298-331   RING finger domain, C3HC4  
ENSOPRP00000009032   0.000053   8-55   RING finger domain, C3HC4  
ENSOPRP00000009037   2.87e-20   271-335   RING finger domain, C3HC4  
ENSOPRP00000009075   2.36e-19   111-167   RING finger domain, C3HC4  
ENSOPRP00000009177   1.35e-20   19-105   RING finger domain, C3HC4  
ENSOPRP00000009203   0.000000000000143   33-94   RING finger domain, C3HC4  
ENSOPRP00000009304   0.0000000000000159   2057-2103   RING finger domain, C3HC4  
ENSOPRP00000009454   0.000000000000486   273-341   RING finger domain, C3HC4  
ENSOPRP00000009481   5.47e-25   100-179   U-box  
ENSOPRP00000009563   3.09e-19   433-514   RING finger domain, C3HC4  
  6.18e-16   613-662   RING finger domain, C3HC4  
  0.00011   513-587   RING finger domain, C3HC4  
ENSOPRP00000009612   1.89e-18   27-97   RING finger domain, C3HC4  
ENSOPRP00000009636   0.00000000000757   722-777   RING finger domain, C3HC4  
ENSOPRP00000009685   0.00000015   267-315   RING finger domain, C3HC4  
ENSOPRP00000009694   3.09e-17   31-103   RING finger domain, C3HC4  
ENSOPRP00000009786   0.0000000000619   16-87   RING finger domain, C3HC4  
ENSOPRP00000009848   2.5e-20   12-78   RING finger domain, C3HC4  
ENSOPRP00000009867   0.0000000247   1213-1266   RING finger domain, C3HC4  
ENSOPRP00000009944   1.06e-18   7-81   RING finger domain, C3HC4  
ENSOPRP00000009961   8.65e-18   1-101   RING finger domain, C3HC4  
ENSOPRP00000009989   6.8e-17   236-289   RING finger domain, C3HC4  
ENSOPRP00000010002   0.00000419   35-87   RING finger domain, C3HC4  
ENSOPRP00000010083   0.0000000106   21-67   RING finger domain, C3HC4  
  0.00272   95-132   RING finger domain, C3HC4  
ENSOPRP00000010118   0.00000000429   2-46   RING finger domain, C3HC4  
ENSOPRP00000010184   1.31e-17   108-163   RING finger domain, C3HC4  
ENSOPRP00000010383   0.000000000000166   221-292   RING finger domain, C3HC4  
ENSOPRP00000010410   0.0000707   278-300   RING finger domain, C3HC4  
ENSOPRP00000010411   0.0000000000000172   4-60   Variant RING domain  
ENSOPRP00000010424   0.00000000000152   261-311   RING finger domain, C3HC4  
ENSOPRP00000010471   3.76e-18   30-96   RING finger domain, C3HC4  
ENSOPRP00000010483   0.00000000004   1779-1839   ZZ domain  
  0.000000000671   1737-1788   ZZ domain  
ENSOPRP00000010486   0.00000000000000116   11-72   RING finger domain, C3HC4  
ENSOPRP00000010616   8.48e-29   148-239   Zf-UBP  
ENSOPRP00000010665   0.0000000000166   2-62   RING finger domain, C3HC4  
ENSOPRP00000010728   0.000000618   310-355   RING finger domain, C3HC4  
ENSOPRP00000010828   0.000000000118   303-355   RING finger domain, C3HC4  
ENSOPRP00000010884   6.71e-20   397-501   RING finger domain, C3HC4  
ENSOPRP00000011145   0.00000000000000104   29-95   RING finger domain, C3HC4  
ENSOPRP00000011228   0.000000000000033   548-612   Variant RING domain  
ENSOPRP00000011251   9.42e-19   7-79   RING finger domain, C3HC4  
ENSOPRP00000011293   0.0000000000408   138-185   RING finger domain, C3HC4  
ENSOPRP00000011346   0.00000000113   27-74   RING finger domain, C3HC4  
ENSOPRP00000011396   0.0000000000242   193-236   RING finger domain, C3HC4  
ENSOPRP00000011413   3.41e-21   2574-2655   ZZ domain  
ENSOPRP00000011825   0.0000000335   36-124   Zf-UBP  
ENSOPRP00000011862   0.000000348   1246-1292   RING finger domain, C3HC4  
ENSOPRP00000011898   5.06e-16   808-871   ZZ domain  
ENSOPRP00000011928   0.000000000000494   648-711   Variant RING domain  
ENSOPRP00000011941   0.000000000442   7-57   RING finger domain, C3HC4  
ENSOPRP00000012003   2.47e-18   289-345   RING finger domain, C3HC4  
  0.0000000000000124   135-222   RING finger domain, C3HC4  
  0.00000000155   208-277   IBR domain  
ENSOPRP00000012287   1.06e-20   5-77   RING finger domain, C3HC4  
ENSOPRP00000012449   0.000000000296   348-406   RING finger domain, C3HC4  
ENSOPRP00000012479   1.96e-17   5-77   RING finger domain, C3HC4  
ENSOPRP00000012568   0.0000206   499-540   RING finger domain, C3HC4  
ENSOPRP00000012636   1.57e-16   550-614   RING finger domain, C3HC4  
ENSOPRP00000012643   0.0000000000000157   17-87   RING finger domain, C3HC4  
ENSOPRP00000012673   1.24e-24   264-339   Variant RING domain  
ENSOPRP00000012778   4.2e-21   150-202   RING finger domain, C3HC4  
ENSOPRP00000012829   4.24e-18   10-86   RING finger domain, C3HC4  
ENSOPRP00000012901   6.13e-23   7-84   RING finger domain, C3HC4  
ENSOPRP00000013023   0.0000000000000144   216-286   RING finger domain, C3HC4  
ENSOPRP00000013028   2.54e-20   260-326   RING finger domain, C3HC4  
ENSOPRP00000013048   0.0000000000000053   67-120   Variant RING domain  
ENSOPRP00000013216   1.2e-22   6-79   RING finger domain, C3HC4  
ENSOPRP00000013292   0.0000000000291   10-65   RING finger domain, C3HC4  
ENSOPRP00000013302   0.00000000025   411-446   RING finger domain, C3HC4  
ENSOPRP00000013306   0.000000000539   27-78   U-box  
  0.00000618   224-278   U-box  
ENSOPRP00000013349   3.25e-23   280-387   Zf-UBP  
ENSOPRP00000013454   0.0000000000000198   8-73   Variant RING domain  
ENSOPRP00000013524   0.000000000000235   140-194   ZZ domain  
ENSOPRP00000013698   0.0000000000000928   6-56   RING finger domain, C3HC4  
ENSOPRP00000013733   0.000000000024   128-188   RING finger domain, C3HC4  
ENSOPRP00000013886   0.000000127   317-363   RING finger domain, C3HC4  
ENSOPRP00000014198   1.06e-16   112-172   ZZ domain  
ENSOPRP00000014207   0.0000657   749-817   RING finger domain, C3HC4  
ENSOPRP00000014239   0.00000000011   906-966   RING finger domain, C3HC4  
ENSOPRP00000014317   0.00000000505   240-291   RING finger domain, C3HC4  
ENSOPRP00000014513   1.18e-20   9-89   RING finger domain, C3HC4  
ENSOPRP00000014845   6.48e-17   16-100   RING finger domain, C3HC4  
  0.0000000000000242   175-218   RING finger domain, C3HC4  
  0.000000883   92-156   IBR domain  
ENSOPRP00000014869   9.94e-21   219-306   RING finger domain, C3HC4  
ENSOPRP00000014894   0.000000000000353   1930-1981   RING finger domain, C3HC4  
ENSOPRP00000014960   0.000000000194   15-85   RING finger domain, C3HC4  
ENSOPRP00000014971   7.51e-43   291-369   RING finger domain, C3HC4  
ENSOPRP00000015017   1.99e-19   6-76   RING finger domain, C3HC4  
ENSOPRP00000015142   0.000000000000124   779-847   IBR domain  
  0.0000000318   696-761   RING finger domain, C3HC4  
  0.00000768   859-931   RING finger domain, C3HC4  
ENSOPRP00000015155   0.000000000000157   12-64   RING finger domain, C3HC4  
ENSOPRP00000015285   1.59e-26   983-1061   U-box  
ENSOPRP00000015365   1.15e-25   4-88   RING finger domain, C3HC4  
ENSOPRP00000015442   1.02e-42   349-426   RING finger domain, C3HC4  
ENSOPRP00000015534   9.08e-20   215-302   RING finger domain, C3HC4  
  0.0000000000000918   390-447   RING finger domain, C3HC4  
  0.000000000000141   290-356   RING finger domain, C3HC4  
ENSOPRP00000015715   2.12e-19   2-113   Zf-UBP  
ENSOPRP00000015753   1.91e-16   179-241   RING finger domain, C3HC4  
ENSOPRP00000015768   0.000053   952-991   RING finger domain, C3HC4  
ENSOPRP00000015789   0.00000000000000619   278-334   RING finger domain, C3HC4  
ENSOPRP00000015810   0.0000000000000516   24-95   RING finger domain, C3HC4  
ENSOPRP00000015886   1.47e-18   6-78   RING finger domain, C3HC4  
ENSOPRP00000015964   4.78e-19   12-83   RING finger domain, C3HC4  
ENSOPRP00000015966   6.63e-18   12-83   RING finger domain, C3HC4  
ENSOPRP00000015987   1.22e-19   12-83   RING finger domain, C3HC4  
ENSOPRP00000015993   1.1e-19   6-78   RING finger domain, C3HC4  
ENSOPRP00000016066   1.2e-18   235-329   U-box  
  0.00000606   470-524   RING finger domain, C3HC4  
ENSOPRP00000016069   3.34e-19   6-77   RING finger domain, C3HC4  
ENSOPRP00000016130   1.71e-19   12-83   RING finger domain, C3HC4  
ENSOPRP00000016158   1.39e-18   12-84   RING finger domain, C3HC4  
ENSOPRP00000016174   1e-19   12-83   RING finger domain, C3HC4  
ENSOPRP00000016198   1.24e-18   12-84   RING finger domain, C3HC4  
ENSOPRP00000016231   5.2e-20   12-83   RING finger domain, C3HC4  
ENSOPRP00000016235   0.0000000353   500-550   RING finger domain, C3HC4  
ENSOPRP00000016283   3.14e-19   6-77   RING finger domain, C3HC4  
 
Weak hits:
ENSOPRP00000000727   0.000177   155-192   RING finger domain, C3HC4  
ENSOPRP00000000746   0.000222   9-64   RING finger domain, C3HC4  
ENSOPRP00000001989   0.00175   661-693   RING finger domain, C3HC4  
ENSOPRP00000002512   0.000114   11-66   RING finger domain, C3HC4  
ENSOPRP00000002699   0.000138   402-443   RING finger domain, C3HC4  
ENSOPRP00000002739   0.00424   1172-1222   RING finger domain, C3HC4  
ENSOPRP00000003471   0.00335   360-414   IBR domain  
ENSOPRP00000004119   0.00115   734-804   RING finger domain, C3HC4  
ENSOPRP00000004561   0.0777   7-42   Variant RING domain  
ENSOPRP00000004990   0.00942   272-317   RING finger domain, C3HC4  
ENSOPRP00000005727   0.0494   336-401   RING finger domain, C3HC4  
ENSOPRP00000005776   0.0247   1634-1658   ZZ domain  
ENSOPRP00000006740   0.00477   1156-1213   RING finger domain, C3HC4  
ENSOPRP00000008248   0.0436   349-391   RING finger domain, C3HC4  
ENSOPRP00000008283   0.0113   156-210   RING finger domain, C3HC4  
ENSOPRP00000008504   0.00146   541-608   RING finger domain, C3HC4  
ENSOPRP00000008894   0.000291   180-207   RING finger domain, C3HC4  
ENSOPRP00000009282   0.0579   396-434   RING finger domain, C3HC4  
ENSOPRP00000009361   0.033   11-45   Zf-UBP  
ENSOPRP00000009377   0.0124   52-92   RING finger domain, C3HC4  
ENSOPRP00000009742   0.000514   523-565   RING finger domain, C3HC4  
ENSOPRP00000009820   0.0127   12-44   RING finger domain, C3HC4  
ENSOPRP00000011216   0.000131   1649-1687   ZZ domain  
ENSOPRP00000011829   0.00989   264-328   RING finger domain, C3HC4  
ENSOPRP00000012639   0.00589   24-55   RING finger domain, C3HC4  
ENSOPRP00000012653   0.00521   411-457   RING finger domain, C3HC4  
ENSOPRP00000013351   0.0247   1573-1616   RING finger domain, C3HC4  
ENSOPRP00000013572   0.00932   612-637   RING finger domain, C3HC4  
ENSOPRP00000014063   0.00624   232-256   RING finger domain, C3HC4  
ENSOPRP00000014686   0.0918   102-142   RING finger domain, C3HC4  
ENSOPRP00000014952   0.000141   657-699   RING finger domain, C3HC4  
ENSOPRP00000015305   0.00243   5-34   RING finger domain, C3HC4  
ENSOPRP00000015853   0.000154   2-45   RING finger domain, C3HC4  
ENSOPRP00000015972   0.053   81-103   U-box  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

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