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  Home > Genomes > Taeniopygia guttata 69_3.2.4 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Taeniopygia guttata 69_3.2.4

Assignment details

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Taeniopygia guttata 69_3.2.4 has 250 significant domains in 47 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTGUP00000001074   4.32e-18   84-156   Complement control module/SCR domain  
  0.00000000000000162   145-214   Complement control module/SCR domain  
  0.00000000000000181   468-539   Complement control module/SCR domain  
  0.00000000000000653   529-594   Complement control module/SCR domain  
  0.000000000000181   277-345   Complement control module/SCR domain  
  0.000000000000375   213-278   Complement control module/SCR domain  
  0.000000000000834   410-474   Complement control module/SCR domain  
  0.00000000153   337-406   Complement control module/SCR domain  
  0.00000000639   40-94   Complement control module/SCR domain  
  0.00000000877   585-648   Complement control module/SCR domain  
ENSTGUP00000001309   0.0000000000000403   141-210   Complement control module/SCR domain  
  0.000000000000181   200-260   Complement control module/SCR domain  
ENSTGUP00000001337   8.63e-20   2724-2793   Complement control module/SCR domain  
  3.1e-19   1983-2052   Complement control module/SCR domain  
  3.61e-19   2666-2735   Complement control module/SCR domain  
  6.21e-19   2334-2403   Complement control module/SCR domain  
  1.2e-18   1626-1694   Complement control module/SCR domain  
  2.92e-18   3074-3143   Complement control module/SCR domain  
  7.37e-18   2219-2287   Complement control module/SCR domain  
  7.37e-18   2550-2619   Complement control module/SCR domain  
  7.69e-18   2608-2672   Complement control module/SCR domain  
  2.36e-17   1742-1809   Complement control module/SCR domain  
  7.02e-17   2782-2846   Complement control module/SCR domain  
  9.98e-17   3133-3199   Complement control module/SCR domain  
  1.01e-16   1800-1868   Complement control module/SCR domain  
  4.03e-16   1526-1583   Complement control module/SCR domain  
  6.07e-16   3251-3310   Complement control module/SCR domain  
  6.39e-16   2276-2345   Complement control module/SCR domain  
  9.31e-16   1685-1747   Complement control module/SCR domain  
  0.0000000000000027   2102-2169   Complement control module/SCR domain  
  0.00000000000000499   2392-2460   Complement control module/SCR domain  
  0.0000000000000123   2957-3021   Complement control module/SCR domain  
  0.0000000000000403   2041-2112   Complement control module/SCR domain  
  0.0000000000000612   2505-2561   Complement control module/SCR domain  
  0.000000000000208   1474-1537   Complement control module/SCR domain  
  0.000000000000375   199-270   Complement control module/SCR domain  
  0.000000000000584   3192-3259   Complement control module/SCR domain  
  0.000000000000737   260-327   Complement control module/SCR domain  
  0.00000000000101   2161-2229   Complement control module/SCR domain  
  0.00000000000297   2842-2902   Complement control module/SCR domain  
  0.00000000000612   1857-1925   Complement control module/SCR domain  
  0.00000000000862   2897-2958   Complement control module/SCR domain  
  0.0000000000153   3015-3079   Complement control module/SCR domain  
  0.000000000514   1922-1989   Complement control module/SCR domain  
  0.0000306   319-376   Complement control module/SCR domain  
  0.00144   551-613   Complement control module/SCR domain  
ENSTGUP00000001597   4.45e-18   462-534   Complement control module/SCR domain  
  1.35e-17   269-341   Complement control module/SCR domain  
  7.09e-17   898-970   Complement control module/SCR domain  
  2.02e-16   209-279   Complement control module/SCR domain  
  0.00000000000000181   81-144   Complement control module/SCR domain  
  0.00000000000000208   330-392   Complement control module/SCR domain  
  0.00000000000000367   772-838   Complement control module/SCR domain  
  0.00000000000000813   585-646   Complement control module/SCR domain  
  0.0000000000000114   649-714   Complement control module/SCR domain  
  0.0000000000000153   524-586   Complement control module/SCR domain  
  0.000000000000195   1029-1086   Complement control module/SCR domain  
  0.000000000000208   959-1026   Complement control module/SCR domain  
  0.000000000000223   21-92   Complement control module/SCR domain  
  0.000000000000275   147-206   Complement control module/SCR domain  
  0.000000000000944   834-908   Complement control module/SCR domain  
  0.00000000000445   727-777   Complement control module/SCR domain  
  0.0000000000655   417-472   Complement control module/SCR domain  
  0.0688   2-26   Complement control module/SCR domain  
ENSTGUP00000001598   0.000000000000134   82-157   Complement control module/SCR domain  
  0.00000000000123   19-87   Complement control module/SCR domain  
ENSTGUP00000001799   7.42e-19   940-1008   Complement control module/SCR domain  
  7.78e-19   1180-1247   Complement control module/SCR domain  
  4.17e-18   1296-1367   Complement control module/SCR domain  
  5.7e-18   997-1065   Complement control module/SCR domain  
  1.35e-17   1356-1425   Complement control module/SCR domain  
  3.2e-16   1237-1307   Complement control module/SCR domain  
  0.00000000000000132   1056-1123   Complement control module/SCR domain  
  0.00000000000000195   882-944   Complement control module/SCR domain  
  0.00000000000000764   347-415   Complement control module/SCR domain  
  0.0000000000000124   1112-1173   Complement control module/SCR domain  
  0.0000000000000131   174-236   Complement control module/SCR domain  
  0.0000000000000347   755-822   Complement control module/SCR domain  
  0.000000000000111   692-759   Complement control module/SCR domain  
  0.00000000000025   1476-1546   Complement control module/SCR domain  
  0.0000000000005   1408-1470   Complement control module/SCR domain  
  0.00000000000264   1537-1595   Complement control module/SCR domain  
  0.00000000000834   826-888   Complement control module/SCR domain  
  0.0000000000256   517-584   Complement control module/SCR domain  
  0.00000000278   1-67   Complement control module/SCR domain  
ENSTGUP00000001816   0.000000000417   104-164   Complement control module/SCR domain  
ENSTGUP00000002069   0.000000000195   120-182   Complement control module/SCR domain  
  0.0000000124   22-81   Complement control module/SCR domain  
ENSTGUP00000002273   0.00000000000756   554-617   Complement control module/SCR domain  
  0.000000334   609-666   Complement control module/SCR domain  
ENSTGUP00000002291   0.000000000124   644-709   Complement control module/SCR domain  
  0.000000459   699-755   Complement control module/SCR domain  
ENSTGUP00000002369   0.0000000000000129   245-304   Complement control module/SCR domain  
  0.0000000000000208   98-159   Complement control module/SCR domain  
  0.0000000278   61-113   Complement control module/SCR domain  
ENSTGUP00000002725   0.000000000000025   131-203   Complement control module/SCR domain  
  0.000000000243   193-253   Complement control module/SCR domain  
  0.00000000324   7-68   Complement control module/SCR domain  
  0.00000000865   68-129   Complement control module/SCR domain  
ENSTGUP00000003385   0.000000000278   1373-1435   Complement control module/SCR domain  
  0.00000000129   1303-1378   Complement control module/SCR domain  
  0.0000000125   1249-1308   Complement control module/SCR domain  
  0.00000172   1171-1245   Complement control module/SCR domain  
ENSTGUP00000003723   0.0000000000459   31-93   Complement control module/SCR domain  
ENSTGUP00000004354   2.88e-18   1158-1220   Complement control module/SCR domain  
  0.0000000000000125   64-135   Complement control module/SCR domain  
  0.0000000000000181   118-188   Complement control module/SCR domain  
  0.000000000000111   979-1042   Complement control module/SCR domain  
  0.000000000000157   1100-1159   Complement control module/SCR domain  
  0.000000000000944   914-977   Complement control module/SCR domain  
  0.00000000000189   1032-1094   Complement control module/SCR domain  
  0.0000000000038   613-669   Complement control module/SCR domain  
  0.0000000000148   792-846   Complement control module/SCR domain  
  0.000000000162   546-607   Complement control module/SCR domain  
  0.000000000249   186-245   Complement control module/SCR domain  
  0.000000000341   243-308   Complement control module/SCR domain  
  0.00000000059   492-554   Complement control module/SCR domain  
  0.00000000796   433-497   Complement control module/SCR domain  
  0.000000459   7-68   Complement control module/SCR domain  
  0.00000223   673-728   Complement control module/SCR domain  
  0.0000089   859-930   Complement control module/SCR domain  
  0.0000123   370-426   Complement control module/SCR domain  
  0.0000275   307-371   Complement control module/SCR domain  
ENSTGUP00000004362   9.85e-17   559-624   Complement control module/SCR domain  
  0.00000000000000121   430-496   Complement control module/SCR domain  
  0.00000000000157   183-246   Complement control module/SCR domain  
  0.0000000000126   502-562   Complement control module/SCR domain  
  0.000000000375   371-427   Complement control module/SCR domain  
  0.0000000131   68-125   Complement control module/SCR domain  
  0.0000000236   130-199   Complement control module/SCR domain  
  0.00000127   3-70   Complement control module/SCR domain  
  0.0000115   249-304   Complement control module/SCR domain  
ENSTGUP00000004372   4.45e-21   61-129   Complement control module/SCR domain  
  2.88e-18   241-304   Complement control module/SCR domain  
  0.0000000000000526   183-245   Complement control module/SCR domain  
  0.000000000000249   1-71   Complement control module/SCR domain  
  0.000000000000931   118-192   Complement control module/SCR domain  
ENSTGUP00000005910   0.00000000000000113   55-123   Complement control module/SCR domain  
ENSTGUP00000006467   0.000000000264   667-736   Complement control module/SCR domain  
ENSTGUP00000006936   0.0000000000000334   92-153   Complement control module/SCR domain  
  0.000000000000347   240-299   Complement control module/SCR domain  
  0.0000000297   38-102   Complement control module/SCR domain  
ENSTGUP00000007104   0.0000000000264   3341-3399   Complement control module/SCR domain  
ENSTGUP00000007682   0.0000000000000111   56-123   Complement control module/SCR domain  
ENSTGUP00000007898   0.0000000000000107   494-559   Complement control module/SCR domain  
  0.000000000000292   553-615   Complement control module/SCR domain  
  0.00000000000076   621-680   Complement control module/SCR domain  
  0.00000000000792   141-202   Complement control module/SCR domain  
  0.000000000324   316-380   Complement control module/SCR domain  
ENSTGUP00000008222   1.03e-16   694-751   Complement control module/SCR domain  
ENSTGUP00000008580   0.00000000000118   1988-2048   Complement control module/SCR domain  
ENSTGUP00000009753   0.0000000000000292   298-367   Complement control module/SCR domain  
ENSTGUP00000010429   0.000000000000167   280-350   Complement control module/SCR domain  
ENSTGUP00000011784   0.000000000389   40-102   Complement control module/SCR domain  
ENSTGUP00000012652   3.51e-21   2067-2138   Complement control module/SCR domain  
  9.85e-19   1712-1780   Complement control module/SCR domain  
  2.5e-18   2008-2078   Complement control module/SCR domain  
  2.56e-18   1769-1837   Complement control module/SCR domain  
  5e-18   1951-2019   Complement control module/SCR domain  
  9.98e-18   1828-1894   Complement control module/SCR domain  
  2.7e-16   2127-2196   Complement control module/SCR domain  
  7.09e-16   2186-2242   Complement control module/SCR domain  
  0.00000000000000128   1526-1593   Complement control module/SCR domain  
  0.00000000000000139   1119-1188   Complement control module/SCR domain  
  0.00000000000000375   1653-1716   Complement control module/SCR domain  
  0.00000000000000594   947-1008   Complement control module/SCR domain  
  0.00000000000000695   2247-2315   Complement control module/SCR domain  
  0.00000000000000723   1883-1944   Complement control module/SCR domain  
  0.0000000000000445   423-487   Complement control module/SCR domain  
  0.0000000000000661   596-661   Complement control module/SCR domain  
  0.0000000000000945   1464-1537   Complement control module/SCR domain  
  0.000000000000167   773-839   Complement control module/SCR domain  
  0.000000000000809   78-142   Complement control module/SCR domain  
  0.00000000000082   249-311   Complement control module/SCR domain  
  0.00000000000117   1598-1660   Complement control module/SCR domain  
  0.00000000000167   2306-2364   Complement control module/SCR domain  
  0.000000000132   1290-1353   Complement control module/SCR domain  
ENSTGUP00000012657   3.2e-16   317-389   Complement control module/SCR domain  
  0.00000000000000756   842-902   Complement control module/SCR domain  
  0.0000000000000347   496-555   Complement control module/SCR domain  
  0.000000000000553   113-174   Complement control module/SCR domain  
  0.000000000000688   667-733   Complement control module/SCR domain  
ENSTGUP00000013278   0.0000000000000134   5-66   Complement control module/SCR domain  
ENSTGUP00000013292   7.83e-20   2343-2411   Complement control module/SCR domain  
  1.95e-18   2583-2651   Complement control module/SCR domain  
  3.64e-18   2400-2469   Complement control module/SCR domain  
  2.7e-17   2700-2766   Complement control module/SCR domain  
  3.78e-16   2760-2829   Complement control module/SCR domain  
  0.00000000000000104   12-84   Complement control module/SCR domain  
  0.00000000000000167   2458-2528   Complement control module/SCR domain  
  0.00000000000000222   2818-2875   Complement control module/SCR domain  
  0.00000000000000278   2157-2226   Complement control module/SCR domain  
  0.00000000000000542   2636-2698   Complement control module/SCR domain  
  0.00000000000000834   2521-2577   Complement control module/SCR domain  
  0.0000000000000138   191-255   Complement control module/SCR domain  
  0.0000000000000222   361-429   Complement control module/SCR domain  
  0.0000000000000222   879-948   Complement control module/SCR domain  
  0.0000000000000264   1054-1118   Complement control module/SCR domain  
  0.0000000000000473   2283-2347   Complement control module/SCR domain  
  0.0000000000000486   536-596   Complement control module/SCR domain  
  0.000000000000104   2880-2947   Complement control module/SCR domain  
  0.000000000000105   1750-1819   Complement control module/SCR domain  
  0.000000000000111   1228-1292   Complement control module/SCR domain  
  0.000000000000162   1578-1642   Complement control module/SCR domain  
  0.000000000000283   1404-1467   Complement control module/SCR domain  
  0.000000000000283   2095-2168   Complement control module/SCR domain  
  0.00000000000729   709-771   Complement control module/SCR domain  
  0.0000000000124   1921-1985   Complement control module/SCR domain  
  0.000000000101   2219-2295   Complement control module/SCR domain  
  0.00000000025   2939-2997   Complement control module/SCR domain  
ENSTGUP00000013346   0.0000000000334   740-798   Complement control module/SCR domain  
ENSTGUP00000013655   0.000000000000709   366-441   Complement control module/SCR domain  
  0.00000000000181   299-369   Complement control module/SCR domain  
ENSTGUP00000013660   0.00000000000167   358-432   Complement control module/SCR domain  
  0.0000000000556   297-361   Complement control module/SCR domain  
ENSTGUP00000014125   0.00000000000000834   61-122   Complement control module/SCR domain  
  0.00000987   9-76   Complement control module/SCR domain  
ENSTGUP00000014298   0.0000000000000138   1-75   Complement control module/SCR domain  
  0.000187   65-96   Complement control module/SCR domain  
ENSTGUP00000014352   0.0000000771   3-60   Complement control module/SCR domain  
ENSTGUP00000014397   0.000000000000556   130-190   Complement control module/SCR domain  
ENSTGUP00000014801   6.39e-19   65-137   Complement control module/SCR domain  
  0.00000000000389   20-75   Complement control module/SCR domain  
ENSTGUP00000016097   1.53e-21   62-130   Complement control module/SCR domain  
  0.000000000000418   2-67   Complement control module/SCR domain  
  0.00000000000153   119-179   Complement control module/SCR domain  
ENSTGUP00000016237   0.0000000000000148   241-305   Complement control module/SCR domain  
  0.000000000000681   300-362   Complement control module/SCR domain  
  0.000000000027   63-128   Complement control module/SCR domain  
  0.000000000136   368-427   Complement control module/SCR domain  
ENSTGUP00000016549   1.07e-16   396-453   Complement control module/SCR domain  
ENSTGUP00000017085   0.00000000000000106   3-69   Complement control module/SCR domain  
  0.00000000000000292   58-123   Complement control module/SCR domain  
  0.00000000000000417   183-248   Complement control module/SCR domain  
  0.0000000000000222   128-192   Complement control module/SCR domain  
ENSTGUP00000017333   1.28e-16   404-470   Complement control module/SCR domain  
  6.53e-16   466-532   Complement control module/SCR domain  
  8.9e-16   287-353   Complement control module/SCR domain  
  0.00000000000000167   347-420   Complement control module/SCR domain  
  0.00000000000000181   217-283   Complement control module/SCR domain  
  0.0000000000000115   529-593   Complement control module/SCR domain  
  0.0000000000000459   603-676   Complement control module/SCR domain  
  0.0000000000000556   661-724   Complement control module/SCR domain  
  0.00000000000167   171-234   Complement control module/SCR domain  
ENSTGUP00000017591   1.67e-16   281-354   Complement control module/SCR domain  
  0.00000000000000118   405-478   Complement control module/SCR domain  
  0.0000000000000025   337-404   Complement control module/SCR domain  
  0.00000000000000264   159-225   Complement control module/SCR domain  
  0.00000000000000653   221-287   Complement control module/SCR domain  
  0.00000000000000806   461-527   Complement control module/SCR domain  
ENSTGUP00000017694   0.000000000236   862-936   Complement control module/SCR domain  
  0.0000139   927-985   Complement control module/SCR domain  
  0.0000195   819-867   Complement control module/SCR domain  
  0.00487   734-805   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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