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  Home > Genomes > Mus musculus 69_38 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Mus musculus 69_38

Assignment details

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Mus musculus 69_38 has 360 significant domains in 324 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000000284   2.21e-20   5-80   RING finger domain, C3HC4  
ENSMUSP00000000449   0.00000000000109   229-298   RING finger domain, C3HC4  
ENSMUSP00000001258   0.000000000000924   704-762   RING finger domain, C3HC4  
ENSMUSP00000002292   0.000000025   331-386   RING finger domain, C3HC4  
ENSMUSP00000002502   0.000000000000259   744-803   RING finger domain, C3HC4  
ENSMUSP00000003677   2.52e-19   317-371   RING finger domain, C3HC4  
ENSMUSP00000004120   0.00000000137   289-371   RING finger domain, C3HC4  
ENSMUSP00000004949   1.51e-18   64-136   RING finger domain, C3HC4  
ENSMUSP00000005072   1.64e-19   390-491   RING finger domain, C3HC4  
ENSMUSP00000005705   0.0000000418   65-128   RING finger domain, C3HC4  
ENSMUSP00000008626   1.33e-19   4-90   RING finger domain, C3HC4  
ENSMUSP00000013338   2.42e-18   288-344   RING finger domain, C3HC4  
  0.00000000000000642   135-220   RING finger domain, C3HC4  
  0.00000000226   207-276   IBR domain  
ENSMUSP00000014022   1.77e-18   103-162   RING finger domain, C3HC4  
ENSMUSP00000014614   1.98e-16   27-96   RING finger domain, C3HC4  
ENSMUSP00000015622   1.69e-16   23-80   RING finger domain, C3HC4  
ENSMUSP00000016383   8.84e-17   457-526   RING finger domain, C3HC4  
  0.0000000000624   150-200   RING finger domain, C3HC4  
ENSMUSP00000016664   0.000000000000156   35-96   RING finger domain, C3HC4  
ENSMUSP00000017290   5.41e-36   1-101   RING finger domain, C3HC4  
ENSMUSP00000017530   0.00000000000000928   9-76   RING finger domain, C3HC4  
ENSMUSP00000017839   0.00000000000000126   16-93   RING finger domain, C3HC4  
ENSMUSP00000018795   0.000000653   16-64   ZZ domain  
ENSMUSP00000018877   0.000000000109   303-355   RING finger domain, C3HC4  
ENSMUSP00000019333   1.87e-19   518-581   RING finger domain, C3HC4  
ENSMUSP00000019443   0.00000000000006   775-843   IBR domain  
  0.0000000274   692-757   RING finger domain, C3HC4  
  0.0000118   855-927   RING finger domain, C3HC4  
ENSMUSP00000020408   0.00000113   435-483   RING finger domain, C3HC4  
ENSMUSP00000020827   6.19e-17   331-388   RING finger domain, C3HC4  
ENSMUSP00000020971   2.12e-16   16-100   RING finger domain, C3HC4  
  0.000000000000265   174-220   RING finger domain, C3HC4  
  0.0000000147   92-159   IBR domain  
ENSMUSP00000021523   0.0000000000167   2-62   RING finger domain, C3HC4  
ENSMUSP00000021761   3.3e-18   6-80   RING finger domain, C3HC4  
ENSMUSP00000022225   0.000000000167   28-80   RING finger domain, C3HC4  
ENSMUSP00000022623   1.06e-19   29-100   RING finger domain, C3HC4  
ENSMUSP00000022708   0.0000000000000214   13-55   RING finger domain, C3HC4  
  0.000706   195-229   IBR domain  
ENSMUSP00000022716   0.00000000000894   17-64   RING finger domain, C3HC4  
ENSMUSP00000022890   5.89e-16   128-208   RING finger domain, C3HC4  
  0.000000000000578   295-350   RING finger domain, C3HC4  
  0.00000000000159   199-268   IBR domain  
ENSMUSP00000023036   3.81e-40   20-105   RING finger domain, C3HC4  
ENSMUSP00000023159   0.000000000000652   278-328   RING finger domain, C3HC4  
ENSMUSP00000023165   0.00000000000294   1701-1748   ZZ domain  
ENSMUSP00000023365   0.0000000000000021   29-95   RING finger domain, C3HC4  
ENSMUSP00000023455   0.0000000000000318   38-104   U-box  
ENSMUSP00000024078   0.0000000000000165   8-73   Variant RING domain  
ENSMUSP00000024779   2.83e-27   2-95   Zf-UBP  
ENSMUSP00000024889   2.65e-18   627-680   RING finger domain, C3HC4  
ENSMUSP00000025183   1.63e-17   33-105   RING finger domain, C3HC4  
ENSMUSP00000025642   0.0000000000000132   3-55   U-box  
ENSMUSP00000025723   2.87e-20   271-335   RING finger domain, C3HC4  
ENSMUSP00000025739   0.00000000000048   723-778   RING finger domain, C3HC4  
ENSMUSP00000026008   9.42e-19   7-79   RING finger domain, C3HC4  
ENSMUSP00000026032   0.0000000000000108   136-186   RING finger domain, C3HC4  
ENSMUSP00000026128   1.99e-31   1-83   RING finger domain, C3HC4  
ENSMUSP00000026264   2.2e-21   334-392   RING finger domain, C3HC4  
  1.01e-16   180-263   RING finger domain, C3HC4  
  0.00000000222   255-322   IBR domain  
ENSMUSP00000026494   2.1e-20   294-342   RING finger domain, C3HC4  
ENSMUSP00000026710   1.77e-20   23-134   Zf-UBP  
ENSMUSP00000027357   0.000000000181   133-205   RING finger domain, C3HC4  
ENSMUSP00000027393   1.72e-44   20-115   RING finger domain, C3HC4  
ENSMUSP00000028132   0.00000205   671-720   RING finger domain, C3HC4  
ENSMUSP00000028368   1.27e-24   389-473   U-box  
ENSMUSP00000028964   0.0000000000311   430-484   RING finger domain, C3HC4  
  0.0000000000336   351-416   IBR domain  
  0.000000000137   279-322   RING finger domain, C3HC4  
ENSMUSP00000029139   0.00000000000033   17-111   RING finger domain, C3HC4  
ENSMUSP00000029740   1.02e-23   209-275   RING finger domain, C3HC4  
ENSMUSP00000030133   0.0000000505   341-407   RING finger domain, C3HC4  
ENSMUSP00000030284   1.74e-19   98-144   RING finger domain, C3HC4  
ENSMUSP00000030439   0.00000000233   503-556   RING finger domain, C3HC4  
ENSMUSP00000030992   1.54e-18   135-187   RING finger domain, C3HC4  
ENSMUSP00000031097   0.0000000388   8-55   ZZ domain  
ENSMUSP00000031345   0.0000000000435   143-190   RING finger domain, C3HC4  
ENSMUSP00000031414   1.77e-26   279-380   Zf-UBP  
  0.0000000000656   262-307   RING finger domain, C3HC4  
ENSMUSP00000031434   0.00000013   324-370   RING finger domain, C3HC4  
ENSMUSP00000031607   3.53e-20   398-502   RING finger domain, C3HC4  
ENSMUSP00000031859   0.00000288   46-78   RING finger domain, C3HC4  
ENSMUSP00000031985   0.000000000000221   273-341   RING finger domain, C3HC4  
ENSMUSP00000033088   0.000000000042   930-991   RING finger domain, C3HC4  
ENSMUSP00000033264   3.53e-22   4-74   RING finger domain, C3HC4  
ENSMUSP00000033501   1.77e-20   1045-1140   Zf-UBP  
ENSMUSP00000034060   0.000000000000106   10-69   RING finger domain, C3HC4  
ENSMUSP00000034644   0.000000000196   821-861   RING finger domain, C3HC4  
ENSMUSP00000034739   5.96e-18   936-984   RING finger domain, C3HC4  
ENSMUSP00000035026   0.000000412   143-219   RING finger domain, C3HC4  
ENSMUSP00000036053   0.0000000000278   25-74   RING finger domain, C3HC4  
ENSMUSP00000037055   0.00000000000012   7-52   RING finger domain, C3HC4  
  0.0000544   180-212   IBR domain  
ENSMUSP00000037178   0.000000000412   8-58   RING finger domain, C3HC4  
ENSMUSP00000037224   0.000000000033   37-82   RING finger domain, C3HC4  
ENSMUSP00000037860   0.00000000000000222   12-81   RING finger domain, C3HC4  
ENSMUSP00000037978   0.00000000381   25-64,112-147   RING finger domain, C3HC4  
  0.0459   149-199   ZZ domain  
ENSMUSP00000038477   8.84e-20   392-458   RING finger domain, C3HC4  
ENSMUSP00000038765   0.00000000000000116   2-88   RING finger domain, C3HC4  
  0.0009   109-161   ZZ domain  
ENSMUSP00000038775   0.00000000964   1715-1766   RING finger domain, C3HC4  
ENSMUSP00000039486   3.31e-23   211-278   RING finger domain, C3HC4  
ENSMUSP00000039519   0.000000048   5-76   RING finger domain, C3HC4  
ENSMUSP00000039604   0.000000432   301-347   RING finger domain, C3HC4  
ENSMUSP00000039955   2.91e-36   325-401   RING finger domain, C3HC4  
ENSMUSP00000040001   0.0000000000000508   6-56   RING finger domain, C3HC4  
ENSMUSP00000040229   1.7e-19   386-489   RING finger domain, C3HC4  
ENSMUSP00000040299   1.12e-18   7-79   RING finger domain, C3HC4  
ENSMUSP00000040431   1.94e-24   221-300   U-box  
ENSMUSP00000040456   0.0000000000000636   12-84   RING finger domain, C3HC4  
ENSMUSP00000040478   2.5e-20   60-139   RING finger domain, C3HC4  
ENSMUSP00000040601   0.00000000404   2-47   RING finger domain, C3HC4  
ENSMUSP00000040946   2.21e-20   330-417   RING finger domain, C3HC4  
  3.26e-16   512-561   RING finger domain, C3HC4  
  0.00000162   404-486   RING finger domain, C3HC4  
ENSMUSP00000041070   1.73e-24   686-762   Variant RING domain  
ENSMUSP00000041263   0.0000000000000188   22-124   Zf-UBP  
ENSMUSP00000041299   1.77e-37   175-283   Zf-UBP  
ENSMUSP00000041581   0.00000000000000279   105-160   Variant RING domain  
ENSMUSP00000041778   0.000000000000625   224-273   RING finger domain, C3HC4  
ENSMUSP00000041790   0.000000000000135   14-64   RING finger domain, C3HC4  
ENSMUSP00000041902   8.39e-43   354-432   RING finger domain, C3HC4  
ENSMUSP00000042569   0.00000000002   258-302   RING finger domain, C3HC4  
ENSMUSP00000042803   0.000000000000053   157-212   Variant RING domain  
ENSMUSP00000042816   0.000000000000326   62-116   RING finger domain, C3HC4  
ENSMUSP00000043215   0.00000272   34-96   RING finger domain, C3HC4  
ENSMUSP00000043780   0.0000000000000121   281-335   RING finger domain, C3HC4  
ENSMUSP00000043974   3.53e-20   360-426   RING finger domain, C3HC4  
ENSMUSP00000044123   0.0000022   34-96   RING finger domain, C3HC4  
ENSMUSP00000044241   3.53e-17   271-319   RING finger domain, C3HC4  
ENSMUSP00000044898   0.000000000000825   40-88   RING finger domain, C3HC4  
ENSMUSP00000044913   5.77e-18   211-289   ZZ domain  
  6.82e-16   331-392   RING finger domain, C3HC4  
  0.0000000486   138-205   RING finger domain, C3HC4  
ENSMUSP00000045009   7.29e-18   2-83   RING finger domain, C3HC4  
ENSMUSP00000046467   1.35e-17   528-593   RING finger domain, C3HC4  
ENSMUSP00000046843   0.00000000000000377   95-149   RING finger domain, C3HC4  
ENSMUSP00000047372   2.04e-16   207-264   RING finger domain, C3HC4  
ENSMUSP00000047403   0.0000141   381-430   RING finger domain, C3HC4  
ENSMUSP00000047627   3.98e-17   34-106   RING finger domain, C3HC4  
ENSMUSP00000048324   4.83e-18   36-147   Zf-UBP  
ENSMUSP00000049057   0.000000000000278   7-75   RING finger domain, C3HC4  
ENSMUSP00000049331   2.15e-20   222-289   RING finger domain, C3HC4  
ENSMUSP00000050084   1.52e-23   4-83   RING finger domain, C3HC4  
ENSMUSP00000050103   0.000000000000872   7-71   RING finger domain, C3HC4  
ENSMUSP00000050267   7.3e-21   3-83   RING finger domain, C3HC4  
ENSMUSP00000050388   7.78e-21   259-319   RING finger domain, C3HC4  
ENSMUSP00000051481   0.0000000212   489-540   RING finger domain, C3HC4  
ENSMUSP00000052258   3.33e-21   316-381   RING finger domain, C3HC4  
ENSMUSP00000052563   0.000000000153   708-762   RING finger domain, C3HC4  
  0.000000002   638-699   IBR domain  
  0.0000177   555-633   RING finger domain, C3HC4  
ENSMUSP00000052856   4.62e-34   28-110   RING finger domain, C3HC4  
ENSMUSP00000054125   0.00000512   561-615   RING finger domain, C3HC4  
ENSMUSP00000054428   2.94e-21   63-137   ZZ domain  
  0.0000000442   944-1004   RING finger domain, C3HC4  
  0.00227   815-859   RING finger domain, C3HC4  
  0.0184   862-907   RING finger domain, C3HC4  
ENSMUSP00000054990   0.0000000404   23-78   RING finger domain, C3HC4  
ENSMUSP00000055058   2.91e-17   6-88   RING finger domain, C3HC4  
ENSMUSP00000055437   0.00000000000299   189-241   RING finger domain, C3HC4  
ENSMUSP00000056464   0.000000000053   74-136   RING finger domain, C3HC4  
ENSMUSP00000057275   0.00000163   517-568   RING finger domain, C3HC4  
ENSMUSP00000057928   7.07e-20   8-85   RING finger domain, C3HC4  
ENSMUSP00000058109   0.000000000000589   16-65   RING finger domain, C3HC4  
ENSMUSP00000058361   0.00000000761   46-117   RING finger domain, C3HC4  
ENSMUSP00000058630   2.21e-18   61-125   RING finger domain, C3HC4  
ENSMUSP00000058730   0.000000000000603   10-79   RING finger domain, C3HC4  
ENSMUSP00000059415   0.00000000167   237-290   RING finger domain, C3HC4  
ENSMUSP00000059715   2.28e-18   205-258   RING finger domain, C3HC4  
ENSMUSP00000060100   1.16e-23   4-83   RING finger domain, C3HC4  
ENSMUSP00000060103   7.66e-21   3-80   RING finger domain, C3HC4  
ENSMUSP00000060167   9.06e-22   8-91   Zf-UBP  
ENSMUSP00000061234   8.25e-24   498-571   Variant RING domain  
ENSMUSP00000062005   0.000000000181   14-71   RING finger domain, C3HC4  
ENSMUSP00000062753   2.59e-24   482-557   Variant RING domain  
ENSMUSP00000063198   0.000000000000153   634-696   Variant RING domain  
ENSMUSP00000063266   0.000012   107-155   RING finger domain, C3HC4  
ENSMUSP00000064410   7.06e-18   3-63   ZZ domain  
ENSMUSP00000064515   4.94e-22   103-197   Zf-UBP  
ENSMUSP00000064624   0.0000000000000381   431-480   RING finger domain, C3HC4  
ENSMUSP00000065008   1.18e-22   4-82   RING finger domain, C3HC4  
ENSMUSP00000065020   5.5e-26   3-85   RING finger domain, C3HC4  
ENSMUSP00000065225   0.0000000000000165   59-113   Variant RING domain  
ENSMUSP00000066324   0.0000000000000252   618-668   RING finger domain, C3HC4  
ENSMUSP00000066403   4.16e-16   539-601   RING finger domain, C3HC4  
  0.000000000306   188-233   RING finger domain, C3HC4  
ENSMUSP00000066662   1.55e-18   8-80   RING finger domain, C3HC4  
ENSMUSP00000066789   0.0000000000033   1662-1708   ZZ domain  
ENSMUSP00000067364   0.00000000000000138   10-71   RING finger domain, C3HC4  
ENSMUSP00000067496   0.00000286   73-139   RING finger domain, C3HC4  
ENSMUSP00000067559   6.36e-20   592-660   RING finger domain, C3HC4  
ENSMUSP00000067736   0.00000000000000468   2232-2285   RING finger domain, C3HC4  
  0.000000000477   2073-2158   RING finger domain, C3HC4  
  0.000636   2145-2213   IBR domain  
ENSMUSP00000068961   0.0000000000000294   549-613   Variant RING domain  
ENSMUSP00000070060   0.00000000578   360-419   RING finger domain, C3HC4  
ENSMUSP00000070548   0.000000146   273-315   RING finger domain, C3HC4  
ENSMUSP00000070662   1.86e-20   545-592   RING finger domain, C3HC4  
ENSMUSP00000071017   0.00000000000000579   27-110   RING finger domain, C3HC4  
  0.00000000000132   187-226   RING finger domain, C3HC4  
  0.0000000203   103-168   IBR domain  
ENSMUSP00000071467   0.000000000000104   209-264   ZZ domain  
ENSMUSP00000071519   1.19e-20   242-329   RING finger domain, C3HC4  
ENSMUSP00000071896   0.0000000000000872   8-70   RING finger domain, C3HC4  
ENSMUSP00000072155   1.65e-32   186-293   Zf-UBP  
ENSMUSP00000072212   4.59e-20   216-302   RING finger domain, C3HC4  
  0.000000000000157   392-448   RING finger domain, C3HC4  
  0.000000000000821   291-357   RING finger domain, C3HC4  
ENSMUSP00000072302   0.000000000000023   328-382   Variant RING domain  
ENSMUSP00000072626   0.00000000000000116   11-72   RING finger domain, C3HC4  
ENSMUSP00000072729   0.0000283   770-839   RING finger domain, C3HC4  
ENSMUSP00000073709   0.00000000000000265   12-84   RING finger domain, C3HC4  
ENSMUSP00000074481   0.0000184   156-232   RING finger domain, C3HC4  
ENSMUSP00000074594   5.3e-20   8-83   RING finger domain, C3HC4  
ENSMUSP00000074639   6.6e-22   9-89   RING finger domain, C3HC4  
ENSMUSP00000075376   0.00000000000000112   10-81   RING finger domain, C3HC4  
ENSMUSP00000075476   6.83e-18   35-108   RING finger domain, C3HC4  
ENSMUSP00000075540   0.000000000489   21-67   RING finger domain, C3HC4  
ENSMUSP00000076093   1.53e-20   3042-3129   ZZ domain  
ENSMUSP00000076160   4.32e-18   130-200   RING finger domain, C3HC4  
ENSMUSP00000076189   1.94e-27   3-89   RING finger domain, C3HC4  
ENSMUSP00000076333   7.95e-18   70-128   RING finger domain, C3HC4  
ENSMUSP00000077197   0.00000000000000219   24-74   RING finger domain, C3HC4  
ENSMUSP00000077513   0.0000000000236   10-73   RING finger domain, C3HC4  
ENSMUSP00000077535   3.09e-20   9-80   RING finger domain, C3HC4  
ENSMUSP00000077584   4.71e-27   265-349   RING finger domain, C3HC4  
ENSMUSP00000077610   1.2e-20   270-330   RING finger domain, C3HC4  
ENSMUSP00000078024   7.06e-16   71-127   Variant RING domain  
ENSMUSP00000078389   0.00000000000203   12-66   RING finger domain, C3HC4  
ENSMUSP00000078641   0.000000000000232   156-243   U-box  
ENSMUSP00000078795   0.00000000000979   183-233   RING finger domain, C3HC4  
ENSMUSP00000078984   1.3e-17   757-822   RING finger domain, C3HC4  
ENSMUSP00000079631   0.0000389   58-98   RING finger domain, C3HC4  
ENSMUSP00000079832   8.95e-19   7-81   RING finger domain, C3HC4  
ENSMUSP00000080601   3.03e-16   566-629   RING finger domain, C3HC4  
ENSMUSP00000080650   0.0000000000006   377-435   RING finger domain, C3HC4  
  0.0000000265   311-375   IBR domain  
  0.0000201   234-305   RING finger domain, C3HC4  
ENSMUSP00000080813   1.3e-21   7-83   RING finger domain, C3HC4  
ENSMUSP00000082168   0.0000000013   522-571   RING finger domain, C3HC4  
ENSMUSP00000082270   0.00000424   36-87   RING finger domain, C3HC4  
ENSMUSP00000082710   0.0000000000109   38-112   RING finger domain, C3HC4  
ENSMUSP00000082816   0.000000112   57-99   RING finger domain, C3HC4  
ENSMUSP00000084400   0.0000000000000442   12-79   RING finger domain, C3HC4  
ENSMUSP00000085812   0.00000000000707   127-187   RING finger domain, C3HC4  
ENSMUSP00000086453   0.00000000000000884   217-287   RING finger domain, C3HC4  
ENSMUSP00000087694   0.0000000000000015   2-60   Variant RING domain  
ENSMUSP00000087787   1.41e-18   207-279   ZZ domain  
ENSMUSP00000088868   0.000000000000418   19-77   RING finger domain, C3HC4  
ENSMUSP00000089463   0.00000000299   599-647   RING finger domain, C3HC4  
ENSMUSP00000091442   9.09e-18   64-140   RING finger domain, C3HC4  
ENSMUSP00000091898   0.0000000000066   341-407   RING finger domain, C3HC4  
ENSMUSP00000092799   0.000000000022   180-223   RING finger domain, C3HC4  
ENSMUSP00000092932   5.5e-23   5-77   RING finger domain, C3HC4  
ENSMUSP00000092975   1.12e-25   2-94   Zf-UBP  
ENSMUSP00000093427   6e-16   149-256   Zf-UBP  
ENSMUSP00000094787   1.12e-29   4-85   RING finger domain, C3HC4  
ENSMUSP00000096213   3.06e-20   1-115   Zf-UBP  
ENSMUSP00000097258   1.38e-32   27-109   RING finger domain, C3HC4  
ENSMUSP00000097776   0.00000000000182   276-326   RING finger domain, C3HC4  
ENSMUSP00000099161   1.41e-19   219-300   ZZ domain  
ENSMUSP00000099437   0.000000000000374   14-68   RING finger domain, C3HC4  
ENSMUSP00000099465   1.01e-20   66-146   ZZ domain  
  0.00000106   861-916   RING finger domain, C3HC4  
  0.00171   795-837   RING finger domain, C3HC4  
ENSMUSP00000099469   0.00000000000000729   270-315   RING finger domain, C3HC4  
ENSMUSP00000099501   1.85e-23   1091-1168   U-box  
ENSMUSP00000099507   0.000000365   345-391   RING finger domain, C3HC4  
ENSMUSP00000099835   1.18e-16   112-173   ZZ domain  
ENSMUSP00000099837   2.99e-20   254-316   RING finger domain, C3HC4  
ENSMUSP00000099976   0.0000000000000053   67-120   Variant RING domain  
ENSMUSP00000100592   2.07e-19   261-315   RING finger domain, C3HC4  
ENSMUSP00000100869   2.16e-21   3-90   RING finger domain, C3HC4  
ENSMUSP00000101501   0.000000000000212   14-109   RING finger domain, C3HC4  
ENSMUSP00000101706   6.36e-16   817-880   ZZ domain  
ENSMUSP00000102048   5.2e-18   9-71   RING finger domain, C3HC4  
ENSMUSP00000102049   8.95e-17   6-78   RING finger domain, C3HC4  
ENSMUSP00000102293   1.73e-16   149-195   RING finger domain, C3HC4  
ENSMUSP00000102350   0.00000757   27-88   RING finger domain, C3HC4  
ENSMUSP00000102401   0.00000000000000552   16-92   RING finger domain, C3HC4  
ENSMUSP00000102441   4.52e-25   4-84   RING finger domain, C3HC4  
ENSMUSP00000102444   8.17e-27   3-86   RING finger domain, C3HC4  
ENSMUSP00000102460   2.5e-17   8-89   RING finger domain, C3HC4  
ENSMUSP00000102473   0.0000000424   137-212   RING finger domain, C3HC4  
ENSMUSP00000103319   0.00000000000000353   44-118   RING finger domain, C3HC4  
ENSMUSP00000103432   2.43e-18   3-90   RING finger domain, C3HC4  
ENSMUSP00000103460   0.000000000689   27-78   U-box  
  0.0000256   221-274   U-box  
ENSMUSP00000104437   9.42e-22   9-81   RING finger domain, C3HC4  
ENSMUSP00000104836   1.63e-19   20-105   RING finger domain, C3HC4  
ENSMUSP00000104890   0.000000102   429-492   RING finger domain, C3HC4  
ENSMUSP00000105493   4.71e-21   289-341   RING finger domain, C3HC4  
ENSMUSP00000106151   0.000000000707   2-51   RING finger domain, C3HC4  
ENSMUSP00000107073   0.000000000839   349-407   RING finger domain, C3HC4  
ENSMUSP00000107438   0.0000000571   517-567   RING finger domain, C3HC4  
ENSMUSP00000107447   0.00000766   54-99   RING finger domain, C3HC4  
ENSMUSP00000108138   0.000000000000106   292-348   RING finger domain, C3HC4  
ENSMUSP00000108556   0.000000000401   8-58   RING finger domain, C3HC4  
ENSMUSP00000108617   0.00000000000000166   2-88   RING finger domain, C3HC4  
  0.00406   106-160   ZZ domain  
ENSMUSP00000108650   3.89e-20   270-324   RING finger domain, C3HC4  
ENSMUSP00000108807   0.00000000000000884   16-86   RING finger domain, C3HC4  
ENSMUSP00000108852   8.59e-18   608-694   ZZ domain  
ENSMUSP00000109336   2.7e-22   18-91   RING finger domain, C3HC4  
ENSMUSP00000109420   6.85e-18   529-577   RING finger domain, C3HC4  
ENSMUSP00000109624   3.06e-21   3279-3367   ZZ domain  
ENSMUSP00000109872   0.0000000239   28-81   RING finger domain, C3HC4  
ENSMUSP00000109995   0.00000000023   140-200   RING finger domain, C3HC4  
ENSMUSP00000110093   0.000000477   335-394   U-box  
ENSMUSP00000110115   9.72e-43   349-426   RING finger domain, C3HC4  
ENSMUSP00000110161   3.98e-17   1135-1191   RING finger domain, C3HC4  
ENSMUSP00000110284   0.000000000000801   18-111   RING finger domain, C3HC4  
ENSMUSP00000110300   0.000000000000795   14-69   RING finger domain, C3HC4  
ENSMUSP00000110645   2.08e-18   4-75   RING finger domain, C3HC4  
ENSMUSP00000111011   1.71e-20   255-306   RING finger domain, C3HC4  
ENSMUSP00000111498   7.18e-21   219-297   ZZ domain  
ENSMUSP00000111780   0.0000000000000462   85-144   RING finger domain, C3HC4  
ENSMUSP00000112801   0.0000000000000042   1923-1973   RING finger domain, C3HC4  
ENSMUSP00000112903   0.00000000000000133   379-437   RING finger domain, C3HC4  
ENSMUSP00000113035   0.0000000000000229   29-92   RING finger domain, C3HC4  
ENSMUSP00000113195   0.000000000000495   105-155   RING finger domain, C3HC4  
ENSMUSP00000113265   1.77e-24   7-91   Zf-UBP  
ENSMUSP00000113346   6.36e-28   996-1080   U-box  
ENSMUSP00000114139   0.00000971   1253-1293   RING finger domain, C3HC4  
ENSMUSP00000114776   1.81e-16   156-216   RING finger domain, C3HC4  
ENSMUSP00000115057   1.85e-20   213-278   RING finger domain, C3HC4  
ENSMUSP00000115187   0.000000000000103   84-123   RING finger domain, C3HC4  
ENSMUSP00000115410   0.0000000272   661-713   RING finger domain, C3HC4  
ENSMUSP00000115669   0.0000124   25-56   RING finger domain, C3HC4  
ENSMUSP00000118594   0.0000000795   333-387   RING finger domain, C3HC4  
ENSMUSP00000118729   0.0000000000000777   162-218   Variant RING domain  
ENSMUSP00000119579   0.0000000000000283   15-77   RING finger domain, C3HC4  
ENSMUSP00000120668   0.0000000000884   903-963   RING finger domain, C3HC4  
ENSMUSP00000120764   7.66e-21   3-80   RING finger domain, C3HC4  
ENSMUSP00000120938   0.000000000000163   51-109   RING finger domain, C3HC4  
ENSMUSP00000121004   6.41e-17   112-192   RING finger domain, C3HC4  
  0.000000000000707   279-333   RING finger domain, C3HC4  
  0.00000000000406   184-252   IBR domain  
ENSMUSP00000121628   0.000000000000104   209-264   ZZ domain  
ENSMUSP00000123646   8.84e-19   4-77   RING finger domain, C3HC4  
ENSMUSP00000123754   0.000000206   622-666   RING finger domain, C3HC4  
ENSMUSP00000123933   0.00000000024   1252-1304   RING finger domain, C3HC4  
ENSMUSP00000124443   0.0000000259   4494-4569   RING finger domain, C3HC4  
ENSMUSP00000124537   0.0000000000000104   111-177   RING finger domain, C3HC4  
  0.0000000000061   294-364   RING finger domain, C3HC4  
ENSMUSP00000124566   2.5e-17   392-450   RING finger domain, C3HC4  
ENSMUSP00000124641   0.0000883   34-109   RING finger domain, C3HC4  
ENSMUSP00000125457   0.0000000883   1422-1475   RING finger domain, C3HC4  
ENSMUSP00000126484   0.00000000000027   15-64   RING finger domain, C3HC4  
ENSMUSP00000126594   0.000000000000183   10-78   RING finger domain, C3HC4  
ENSMUSP00000126976   0.0000000424   360-419   RING finger domain, C3HC4  
ENSMUSP00000127527   0.000000000000331   10-62   RING finger domain, C3HC4  
ENSMUSP00000127997   0.0000648   112-150   RING finger domain, C3HC4  
ENSMUSP00000129255   0.000000000000115   10-63   RING finger domain, C3HC4  
ENSMUSP00000130027   0.00000000000665   3947-3990   RING finger domain, C3HC4  
ENSMUSP00000130515   0.000000000129   1817-1877   ZZ domain  
  0.000000000695   1775-1826   ZZ domain  
ENSMUSP00000130614   0.000000000000017   39-107   RING finger domain, C3HC4  
ENSMUSP00000133953   0.000000000101   11-55   RING finger domain, C3HC4  
ENSMUSP00000134222   0.0000000106   467-514   RING finger domain, C3HC4  
ENSMUSP00000134739   0.000000138   98-176   RING finger domain, C3HC4  
ENSMUSP00000136248   2.5e-17   8-89   RING finger domain, C3HC4  
ENSMUSP00000137435   0.000000000000221   3-55   U-box  
ENSMUSP00000137446   0.000000000000042   17-79   RING finger domain, C3HC4  
 
Weak hits:
ENSMUSP00000005064   0.00589   317-381   RING finger domain, C3HC4  
ENSMUSP00000007961   0.000918   744-814   RING finger domain, C3HC4  
ENSMUSP00000012612   0.00291   595-661   RING finger domain, C3HC4  
ENSMUSP00000015271   0.00159   668-722   RING finger domain, C3HC4  
ENSMUSP00000019907   0.0006   340-394   RING finger domain, C3HC4  
ENSMUSP00000022459   0.00795   157-210   RING finger domain, C3HC4  
ENSMUSP00000028728   0.0102   1157-1215   RING finger domain, C3HC4  
ENSMUSP00000036915   0.000112   846-882   RING finger domain, C3HC4  
ENSMUSP00000038367   0.0024   26-72   RING finger domain, C3HC4  
ENSMUSP00000065502   0.0101   670-714   RING finger domain, C3HC4  
ENSMUSP00000065716   0.00494   660-692   RING finger domain, C3HC4  
ENSMUSP00000070411   0.00268   436-482   RING finger domain, C3HC4  
ENSMUSP00000072894   0.00172   283-341   RING finger domain, C3HC4  
ENSMUSP00000090979   0.0146   298-340   RING finger domain, C3HC4  
ENSMUSP00000093469   0.000883   26-78   RING finger domain, C3HC4  
ENSMUSP00000093622   0.00589   24-55   RING finger domain, C3HC4  
ENSMUSP00000099633   0.0612   13-59   Zf-UBP  
ENSMUSP00000109299   0.00494   12-41   RING finger domain, C3HC4  
ENSMUSP00000110424   0.0512   344-409   RING finger domain, C3HC4  
ENSMUSP00000113193   0.0412   332-372   RING finger domain, C3HC4  
ENSMUSP00000122027   0.000167   1320-1375   RING finger domain, C3HC4  
ENSMUSP00000124994   0.0565   62-102   RING finger domain, C3HC4  
ENSMUSP00000128154   0.0271   42-80   Variant RING domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.