SUPERFAMILY 1.75 HMM library and genome assignments server

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EGF/Laminin superfamily domain assignments
in
Anopheles gambiae VectorBase AgamP3.6

Assignment details

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Anopheles gambiae VectorBase AgamP3.6 (VectorBase) has 218 significant domains in 56 proteins.

     

Sequence ID   Evalue   Region   Family  
AGAP000037-PA|hypothetical   0.000000000179   635-684   EGF-type module  
  0.0000000272   1257-1297   EGF-type module  
  0.00000432   959-994   EGF-type module  
  0.00000573   604-650   EGF-type module  
  0.000148   1563-1597   EGF-type module  
  0.000331   1867-1903   EGF-type module  
AGAP000225-PA|hypothetical   0.00000000000753   337-396   Laminin-type module  
  0.00000000201   394-449   Laminin-type module  
  0.000000153   457-497   Laminin-type module  
AGAP000228-PA|hypothetical   0.0000000000502   345-403   Laminin-type module  
  0.00000000179   401-456   Laminin-type module  
  0.000000134   464-504   Laminin-type module  
AGAP000331-PA|hypothetical   0.00000000329   3129-3167   EGF-type module  
  0.0000000275   3153-3201   EGF-type module  
  0.000134   4412-4450   EGF-type module  
  0.000164   3478-3533   EGF-type module  
  0.000678   2336-2390   EGF-type module  
  0.0174   2651-2711   EGF-type module  
AGAP000427-PA|hypothetical   0.00000000203   1398-1445   EGF-type module  
  0.0000000173   332-373   EGF-type module  
  0.000000794   1367-1411   EGF-type module  
  0.0000147   642-684   EGF-type module  
  0.000264   295-340   EGF-type module  
  0.0712   957-989   EGF-type module  
AGAP000443-PA|C-Type   0.000000305   1498-1542   EGF-type module  
  0.000447   1420-1461   EGF-type module  
  0.00251   1460-1496   EGF-type module  
AGAP000461-PA|hypothetical   0.0000569   595-621   EGF-type module  
  0.000193   666-690   Integrin beta EGF-like domains  
  0.00041   564-589   EGF-type module  
  0.00167   500-525   Integrin beta EGF-like domains  
  0.00385   696-721   Integrin beta EGF-like domains  
  0.00435   724-762   EGF-type module  
  0.0176   529-556   Integrin beta EGF-like domains  
AGAP000461-PB|hypothetical   0.0000578   595-621   EGF-type module  
  0.000201   666-690   Integrin beta EGF-like domains  
  0.000419   564-589   EGF-type module  
  0.00167   500-525   Integrin beta EGF-like domains  
  0.00214   696-721   Integrin beta EGF-like domains  
  0.00435   724-762   EGF-type module  
  0.0184   529-556   Integrin beta EGF-like domains  
AGAP000685-PA|hypothetical   0.000000035   1253-1298   EGF-type module  
  0.00000155   1294-1334   EGF-type module  
  0.000011   1220-1258   EGF-type module  
  0.00003   1178-1223   EGF-type module  
  0.000148   1400-1456   EGF-type module  
AGAP000815-PA|integrin   0.00000000272   589-629   Integrin beta EGF-like domains  
  0.000307   635-677   Integrin beta EGF-like domains  
  0.0363   555-577   Integrin beta EGF-like domains  
AGAP001015-PA|hypothetical   0.000000000000393   799-842   EGF-type module  
  0.0000000000146   572-614   EGF-type module  
  0.0000000000719   145-182   EGF-type module  
  0.000000000137   837-879   EGF-type module  
  0.000000000201   1187-1230   EGF-type module  
  0.000000000214   647-689   EGF-type module  
  0.000000000307   302-348   EGF-type module  
  0.000000000643   340-378   EGF-type module  
  0.00000000393   607-651   EGF-type module  
  0.00000000714   1032-1072   EGF-type module  
  0.0000000152   1069-1105   EGF-type module  
  0.0000000162   1346-1383   EGF-type module  
  0.0000000643   377-417   EGF-type module  
  0.000000179   71-106   EGF-type module  
  0.000000285   1107-1148   EGF-type module  
  0.000000419   107-149   EGF-type module  
  0.00000117   1423-1459   EGF-type module  
  0.00000268   24-68   EGF-type module  
  0.00000951   420-455   EGF-type module  
  0.000026   1385-1422   EGF-type module  
  0.0000328   1160-1195   EGF-type module  
  0.000115   184-213   EGF-type module  
AGAP001381-PA|hypothetical   0.0000000000977   942-990   Laminin-type module  
  0.00000000134   458-523   Laminin-type module  
  0.00000000446   1097-1144   Laminin-type module  
  0.00000000837   988-1040   Laminin-type module  
  0.0000000142   1048-1099   Laminin-type module  
  0.000000019   1149-1197   Laminin-type module  
  0.0000000226   1200-1242   Laminin-type module  
  0.000000103   632-670   Laminin-type module  
  0.000000145   395-447   Laminin-type module  
  0.000000614   894-935   Laminin-type module  
  0.00000112   545-583   Laminin-type module  
  0.00000162   581-624   Laminin-type module  
  0.0000307   1248-1295   Laminin-type module  
AGAP002186-PA|hypothetical   0.0000000000474   374-416   EGF-type module  
AGAP002268-PA|hypothetical   0.000000000306   2501-2543   EGF-type module  
  0.000614   2569-2620   EGF-type module  
AGAP002739-PA|hypothetical   0.000000000172   2044-2081   EGF-type module  
  0.000000000237   2354-2396   EGF-type module  
  0.00000000742   2466-2507   EGF-type module  
  0.0000000126   966-1002   EGF-type module  
  0.0000000385   2163-2211   EGF-type module  
  0.0000022   776-810   EGF-type module  
  0.00152   3354-3393   EGF-type module  
  0.00921   3314-3352   EGF-type module  
  0.0587   2394-2423   EGF-type module  
AGAP002793-PA|hypothetical   0.000000000109   1032-1077   EGF-type module  
  0.000000000767   951-992   EGF-type module  
  0.0000000192   916-959   EGF-type module  
  0.000000155   1000-1037   EGF-type module  
  0.000000213   874-915   EGF-type module  
  0.00000719   1317-1356   EGF-type module  
AGAP003027-PA|hypothetical   0.0000155   295-331   EGF-type module  
  0.00339   135-164   EGF-type module  
  0.00753   34-93   EGF-like domain of nidogen-1  
AGAP003506-PA|hypothetical   0.000000239   946-993   Laminin-type module  
  0.0173   75-106   EGF-type module  
AGAP003656-PA|hypothetical   0.000000138   1917-1959   Laminin-type module  
  0.000164   2212-2256   Laminin-type module  
  0.000193   1881-1919   Laminin-type module  
  0.00963   1586-1628   Laminin-type module  
  0.0114   1517-1544   Laminin-type module  
AGAP003656-PB|hypothetical   0.000000138   1888-1930   Laminin-type module  
  0.000164   2183-2227   Laminin-type module  
  0.000193   1852-1890   Laminin-type module  
  0.00148   1557-1599   Laminin-type module  
AGAP003656-PC|hypothetical   0.000000105   1917-1959   Laminin-type module  
  0.00163   2212-2256   Laminin-type module  
  0.00167   1881-1919   Laminin-type module  
  0.00711   1586-1628   Laminin-type module  
AGAP003702-PA|hypothetical   0.0000000000502   1181-1224   EGF-type module  
  0.0000000000911   1018-1063   EGF-type module  
AGAP003873-PA|hypothetical   0.0000000000142   362-404   EGF-type module  
  0.00000000026   400-438   EGF-type module  
  0.000000000322   1803-1840   EGF-type module  
  0.000000000822   681-723   EGF-type module  
  0.00000000159   1921-1965   EGF-type module  
  0.00000000508   203-241   EGF-type module  
  0.00000000753   900-945   EGF-type module  
  0.0000000231   287-322   EGF-type module  
  0.0000000307   1765-1807   EGF-type module  
  0.000000042   243-280   EGF-type module  
  0.0000000503   610-651   EGF-type module  
  0.0000000529   646-682   EGF-type module  
  0.000000635   1884-1925   EGF-type module  
  0.000000839   320-363   EGF-type module  
  0.00000155   1844-1886   EGF-type module  
  0.00000522   1960-1998   EGF-type module  
  0.00000536   1731-1770   EGF-type module  
  0.00000771   499-549   EGF-type module  
  0.0000419   2001-2042   EGF-type module  
  0.000268   941-979   EGF-type module  
  0.000451   549-580   EGF-type module  
  0.0109   884-906   EGF-type module  
  0.0135   837-857   EGF-type module  
AGAP004154-PA|hypothetical   0.000000000167   457-500   EGF-type module  
  0.000000000466   728-765   EGF-type module  
  0.00000000132   844-884   EGF-type module  
  0.00000000209   575-619   EGF-type module  
  0.0000000028   807-848   EGF-type module  
  0.0000000366   539-581   EGF-type module  
  0.000000097   615-652   EGF-type module  
  0.000000765   495-537   EGF-type module  
  0.00000466   303-341   EGF-type module  
  0.000035   769-805   EGF-type module  
  0.00011   438-461   EGF-type module  
  0.000317   698-732   EGF-type module  
AGAP004850-PA|putative   0.000000000145   1502-1541   EGF-type module  
  0.00285   2117-2156   Laminin-type module  
  0.0387   2023-2061   EGF-type module  
  0.0925   1991-2021   EGF-type module  
AGAP004936-PA|hypothetical   0.000000142   57-96   EGF-type module  
AGAP004993-PA|hypothetical   0.0000000000193   1462-1512   Laminin-type module  
  0.000000000335   542-590   Laminin-type module  
  0.000000000419   496-544   Laminin-type module  
  0.00000000117   1914-1967   Laminin-type module  
  0.0000000106   1371-1419   Laminin-type module  
  0.000000012   1863-1916   Laminin-type module  
  0.000000022   450-498   Laminin-type module  
  0.000000134   1806-1858   Laminin-type module  
  0.00000014   2014-2063   Laminin-type module  
  0.000000279   733-783   Laminin-type module  
  0.0000019   588-635   Laminin-type module  
  0.00000391   633-680   Laminin-type module  
  0.0000067   275-332   Laminin-type module  
  0.00000753   335-391   Laminin-type module  
  0.0000209   1510-1558   Laminin-type module  
  0.0000243   405-452   Laminin-type module  
  0.0000335   1765-1808   Laminin-type module  
  0.0000419   678-730   Laminin-type module  
  0.0000586   1423-1459   Laminin-type module  
  0.0000725   1967-2016   Laminin-type module  
  0.000126   786-825   Laminin-type module  
  0.00053   2061-2109   Laminin-type module  
AGAP005526-PA|hypothetical   0.0000000000109   135-177   EGF-type module  
  0.00000000534   433-476   EGF-type module  
  0.0000156   296-346   EGF-type module  
  0.0000466   395-429   EGF-type module  
AGAP005682-PA|hypothetical   0.000000000723   274-315   EGF-type module  
  0.00000594   244-280   EGF-type module  
AGAP005714-PA|hypothetical   0.0000000000384   742-794   EGF-type module  
  0.000000000127   796-835   EGF-type module  
  0.000000000324   429-479   EGF-type module  
  0.000069   388-439   EGF-type module  
  0.02   472-501   EGF-type module  
AGAP007023-PA|Protein   0.00000282   518-561   EGF-type module  
  0.00000457   481-515   EGF-type module  
  0.00061   400-433   EGF-type module  
  0.00686   370-400   EGF-type module  
  0.0335   437-479   EGF-type module  
AGAP007110-PA|hypothetical   0.000000000272   496-536   EGF-type module  
AGAP007629-PA|laminin   0.0000000000419   831-878   Laminin-type module  
  0.00000000167   444-499   Laminin-type module  
  0.00000000307   728-779   Laminin-type module  
  0.00000000977   940-981   Laminin-type module  
  0.0000000128   282-344   Laminin-type module  
  0.000000137   886-937   Laminin-type module  
  0.000000226   397-444   Laminin-type module  
  0.00000176   783-833   Laminin-type module  
  0.000131   342-387   Laminin-type module  
  0.000156   691-730   Laminin-type module  
  0.00165   988-1034   Laminin-type module  
AGAP007629-PB|laminin   0.0000000000419   831-878   Laminin-type module  
  0.00000000167   444-499   Laminin-type module  
  0.00000000307   728-779   Laminin-type module  
  0.00000000977   940-981   Laminin-type module  
  0.0000000128   282-344   Laminin-type module  
  0.000000137   886-937   Laminin-type module  
  0.000000226   397-444   Laminin-type module  
  0.00000176   783-833   Laminin-type module  
  0.000131   342-387   Laminin-type module  
  0.000156   691-730   Laminin-type module  
  0.00165   988-1034   Laminin-type module  
AGAP007849-PA|hypothetical   0.000000000698   187-235   Laminin-type module  
  0.0000000181   564-613   Laminin-type module  
  0.0000000335   43-89   Laminin-type module  
  0.000000142   92-140   Laminin-type module  
  0.0000363   665-706   Laminin-type module  
  0.0000527   620-667   Laminin-type module  
  0.00307   252-291   Laminin-type module  
  0.0046   140-184   Laminin-type module  
AGAP007850-PA|hypothetical   0.00000000331   702-753   Laminin-type module  
  0.0000000335   857-898   Laminin-type module  
  0.0000000698   904-946   Laminin-type module  
  0.0000000921   760-815   Laminin-type module  
  0.00000234   311-355   Laminin-type module  
  0.00000795   247-303   Laminin-type module  
  0.00000893   818-859   Laminin-type module  
  0.000193   412-448   Laminin-type module  
  0.00151   353-392   Laminin-type module  
  0.00446   658-700   EGF-type module  
AGAP007924-PA|hypothetical   0.00000144   4006-4042   EGF-type module  
  0.0000122   3965-4005   EGF-type module  
  0.0158   3945-3968   EGF-type module  
AGAP008185-PA|hypothetical   0.00000137   1217-1252   EGF-type module  
  0.00000226   1340-1388   Laminin-type module  
  0.00000307   2363-2412   Laminin-type module  
  0.0000753   2449-2489   Laminin-type module  
AGAP009711-PA|hypothetical   0.00000000444   1374-1414   EGF-type module  
AGAP009716-PA|hypothetical   0.00000000296   1500-1540   EGF-type module  
  0.0209   1450-1517   EGF-type module  
AGAP009717-PA|hypothetical   0.00000000208   1500-1540   EGF-type module  
AGAP009723-PA|hypothetical   0.00000000243   1489-1529   EGF-type module  
AGAP009796-PA|hypothetical   0.000000000925   23-62   EGF-type module  
  0.0136   2-18   EGF-type module  
AGAP010021-PA|hypothetical   0.00000000457   1251-1288   EGF-type module  
  0.0000000229   323-377   EGF-type module  
  0.000000251   536-580   EGF-type module  
  0.000000251   727-774   EGF-type module  
  0.000000839   938-973   EGF-type module  
  0.00000141   1406-1454   EGF-type module  
  0.0000114   627-666   EGF-type module  
  0.000126   504-541   EGF-type module  
  0.0041   906-944   EGF-type module  
  0.00578   692-739   EGF-type module  
  0.00781   1308-1338   EGF-type module  
  0.0215   586-634   EGF-type module  
  0.0387   1374-1417   EGF-type module  
AGAP010049-PA|hypothetical   0.000000000124   372-415   EGF-type module  
  0.000000000447   569-609   EGF-type module  
  0.000000944   525-565   EGF-type module  
  0.000168   335-372   EGF-type module  
AGAP010233-PA|hypothetical   0.00000148   560-596   Integrin beta EGF-like domains  
  0.0000173   609-636   Integrin beta EGF-like domains  
  0.000209   532-560   Integrin beta EGF-like domains  
  0.00698   479-506   Integrin beta EGF-like domains  
AGAP010265-PA|hypothetical   0.0000000439   330-387   EGF-type module  
  0.000000328   291-329   EGF-type module  
  0.0000168   379-427   EGF-type module  
AGAP010335-PA|hypothetical   0.000000419   445-499   EGF-type module  
  0.000839   417-449   EGF-type module  
AGAP010940-PA|hypothetical   0.0000000848   235-279   EGF-type module  
  0.00335   143-167   EGF-type module  
  0.0373   19-41   EGF-type module  
  0.0873   201-237   EGF-type module  
AGAP011322-PA|hypothetical   0.00000000779   165-210   EGF-type module  
  0.0000839   220-272   EGF-type module  
AGAP011526-PA|hypothetical   0.000019   1219-1263   EGF-type module  
  0.0186   1199-1223   EGF-type module  
AGAP011770-PA|hypothetical   0.00000000136   582-628   EGF-type module  
  0.000000359   891-939   EGF-type module  
  0.000758   1194-1235   EGF-type module  
  0.00112   274-315   EGF-type module  
AGAP012372-PA|hypothetical   0.0000000914   1540-1594   EGF-type module  
  0.000000664   177-216   EGF-type module  
  0.0000264   4454-4495   EGF-type module  
  0.0000487   4323-4359   EGF-type module  
  0.000128   4251-4289   EGF-type module  
  0.000248   1189-1228   EGF-type module  
  0.00027   3813-3851   EGF-type module  
  0.000295   4286-4324   EGF-type module  
  0.000307   1863-1908   EGF-type module  
  0.000483   1228-1264   EGF-type module  
  0.000922   4395-4431   EGF-type module  
  0.00117   2173-2220   EGF-type module  
  0.00545   4361-4394   EGF-type module  
  0.00583   511-554   EGF-type module  
  0.0318   2495-2553   EGF-type module  
AGAP012986-PA|hypothetical   0.00000000738   155-203   EGF-type module  
AGAP012986-PB|hypothetical   0.00000000738   155-203   EGF-type module  
AGAP013719-PA|hypothetical   0.0000000000318   90-133   EGF-type module  
  0.0000000000409   206-244   EGF-type module  
  0.000000000145   128-170   EGF-type module  
  0.0000000967   245-288   EGF-type module  
  0.00000019   294-327   EGF-type module  
  0.00000266   55-93   EGF-type module  
  0.0000819   169-210   EGF-type module  
  0.00244   1553-1589   EGF-type module  
  0.00282   906-959   EGF-type module  
 
Weak hits:
AGAP000117-PA|hypothetical   0.000183   208-241   EGF-type module  
  0.000206   273-304   EGF-type module  
  0.000466   304-335   EGF-type module  
  0.000838   241-270   EGF-type module  
  0.00264   340-371   EGF-type module  
AGAP000974-PA|hypothetical   0.0243   704-749   Integrin beta EGF-like domains  
AGAP002157-PA|hypothetical   0.00168   523-565   EGF-type module  
AGAP002157-PB|hypothetical   0.00235   345-391   EGF-type module  
AGAP002672-PA|hypothetical   0.000664   781-823   Merozoite surface protein 1 (MSP-1)  
AGAP005165-PA|hypothetical   0.000104   36-75   EGF-type module  
AGAP006513-PA|hypothetical   0.00204   755-795   EGF-type module  
AGAP007256-PA|hypothetical   0.0134   310-348   Laminin-type module  
  0.0176   564-611   Laminin-type module  
  0.018   260-305   Laminin-type module  
  0.0251   516-550   Laminin-type module  
AGAP007900-PA|hypothetical   0.00162   756-792   EGF-type module  
  0.00225   132-185   EGF-type module  
AGAP008132-PA|hypothetical   0.0768   233-255   Integrin beta EGF-like domains  
AGAP008193-PA|hypothetical   0.0104   807-850   EGF-type module  
  0.0547   767-803   EGF-like domain of nidogen-1  
AGAP008740-PA|hypothetical   0.00967   7-35   EGF-type module  
AGAP009181-PA|hypothetical   0.0136   18-42   Integrin beta EGF-like domains  
AGAP009726-PA|hypothetical   0.0571   885-908   EGF-type module  
AGAP010023-PA|hypothetical   0.00134   1618-1651   EGF-type module  
  0.00178   17-50   EGF-type module  
  0.00385   978-1012   EGF-type module  
  0.00649   1192-1226   EGF-type module  
  0.01   1299-1332   EGF-type module  
  0.0178   1087-1119   EGF-type module  
  0.0184   2046-2080   EGF-type module  
  0.0285   446-477   EGF-type module  
  0.0578   342-372   EGF-type module  
  0.0837   872-905   EGF-type module  
AGAP010024-PA|hypothetical   0.0226   424-458   EGF-type module  
  0.0527   105-138   EGF-type module  
AGAP010548-PA|hypothetical   0.000586   324-351   EGF-type module  
AGAP010896-PA|hypothetical   0.0536   953-989   EGF-type module  
AGAP011034-PA|hypothetical   0.000481   451-475   EGF-type module  
  0.00879   551-575   Integrin beta EGF-like domains  
  0.0123   420-443   EGF-type module  
  0.018   355-379   EGF-type module  
  0.0293   384-410   EGF-type module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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