SUPERFAMILY 1.75 HMM library and genome assignments server

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EGF/Laminin superfamily domain assignments
in
Daphnia pulex

Assignment details

(show help)


Daphnia pulex has 256 significant domains in 74 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Dappu1|101895|fgenesh1_pg.C_scaffold_19000089   0.0000000912   793-854   EGF-type module  
  0.000000205   400-473   EGF-type module  
  0.000000252   197-241   EGF-type module  
jgi|Dappu1|104541|fgenesh1_pg.C_scaffold_31000004   0.00000000207   166-206   EGF-type module  
  0.00000000251   121-165   EGF-type module  
  0.00000000803   88-125   EGF-type module  
  0.0000572   221-258   EGF-type module  
jgi|Dappu1|116992|fgenesh1_pg.C_scaffold_211000008   0.0000324   259-290   EGF-type module  
  0.0000436   228-258   EGF-type module  
  0.000524   162-194   EGF-type module  
  0.000935   196-225   EGF-type module  
  0.00277   302-331   EGF-type module  
jgi|Dappu1|12896|gw1.1364.3.1   0.000000000482   208-246   EGF-type module  
  0.00000000241   43-89   EGF-type module  
  0.00000000375   247-281   EGF-type module  
  0.000000375   5-42   EGF-type module  
jgi|Dappu1|129960|fgenesh1_pm.C_scaffold_108000002   0.0000000000447   425-468   EGF-type module  
  0.00000017   397-433   EGF-type module  
jgi|Dappu1|16853|gw1.102.68.1   0.000000000686   1-34   EGF-type module  
  0.00000033   37-70   EGF-type module  
jgi|Dappu1|17753|gw1.81.43.1   0.000000000479   2-37   EGF-type module  
  0.000000166   39-73   EGF-type module  
jgi|Dappu1|186952|estExt_fgenesh1_pm.C_10100   0.000000022   185-226   EGF-type module  
  0.0168   453-477   EGF-type module  
jgi|Dappu1|194252|estExt_Genewise1Plus.C_110391   0.0000000943   1126-1161   EGF-type module  
  0.000000363   1249-1298   Laminin-type module  
  0.000000921   2276-2327   Laminin-type module  
  0.000419   2195-2243   EGF-type module  
  0.00257   2382-2421   Laminin-type module  
  0.00854   130-155   EGF-type module  
jgi|Dappu1|196539|estExt_Genewise1Plus.C_230303   0.0000000272   570-610   Integrin beta EGF-like domains  
  0.000273   621-659   Integrin beta EGF-like domains  
  0.0265   535-558   Integrin beta EGF-like domains  
jgi|Dappu1|204203|estExt_Genewise1Plus.C_1980013   0.0000000000238   457-502   EGF-type module  
  0.000000000239   616-659   EGF-type module  
jgi|Dappu1|21404|gw1.11.206.1   0.0000000543   320-370   EGF-like domain of nidogen-1  
  0.000000227   357-403   EGF-type module  
  0.0000254   550-580   EGF-type module  
jgi|Dappu1|220428|estExt_fgenesh1_pg.C_20230   0.0000000339   264-303   EGF-type module  
jgi|Dappu1|221966|estExt_fgenesh1_pg.C_70185   0.000000000061   180-222   EGF-type module  
  0.0000000718   498-542   EGF-type module  
  0.0000128   307-364   EGF-type module  
  0.0000181   462-502   EGF-type module  
  0.000444   349-408   EGF-type module  
  0.0201   400-442   EGF-type module  
jgi|Dappu1|232498|SNAP_00000556   0.0000000103   1552-1601   Laminin-type module  
  0.000698   1861-1900   Laminin-type module  
  0.000753   951-981   Laminin-type module  
  0.00156   1276-1316   Laminin-type module  
  0.0176   1516-1554   Laminin-type module  
  0.0363   1621-1661   Laminin-type module  
jgi|Dappu1|233379|SNAP_00001437   0.000000016   5417-5456   EGF-type module  
  0.0335   5054-5087   EGF-type module  
jgi|Dappu1|237406|SNAP_00005464   0.000000312   233-273   EGF-type module  
  0.000008   544-586   EGF-type module  
  0.0000352   854-908   EGF-type module  
jgi|Dappu1|239483|SNAP_00007541   0.0000914   68-109   EGF-type module  
jgi|Dappu1|247827|SNAP_00015885   0.000000000621   2290-2327   EGF-type module  
  0.00000000357   2404-2446   EGF-type module  
  0.000000164   1196-1234   EGF-type module  
  0.000000474   2368-2411   EGF-type module  
  0.0000051   3607-3648   EGF-type module  
  0.0000106   2255-2289   EGF-type module  
  0.0000879   991-1039   EGF-type module  
  0.000866   2332-2368   EGF-type module  
jgi|Dappu1|247963|SNAP_00016021   0.00000629   57-103   EGF-type module  
  0.00000839   195-228   EGF-type module  
jgi|Dappu1|247979|SNAP_00016037   0.0000304   310-345   EGF-type module  
jgi|Dappu1|263601|SNAP_00031659   0.00000000419   750-796   EGF-type module  
  0.00000206   719-759   EGF-type module  
  0.00203   345-386   EGF-type module  
jgi|Dappu1|267546|SNAP_00035604   0.00000000596   19-56   EGF-type module  
  0.00000000904   52-97   EGF-type module  
  0.0000366   141-178   EGF-type module  
  0.00602   97-125   EGF-type module  
jgi|Dappu1|267643|SNAP_00035701   0.0000000000547   659-706   EGF-type module  
  0.0000000474   631-672   EGF-type module  
  0.0184   267-321   EGF-type module  
jgi|Dappu1|269232|SNAP_00037290   0.0000000000547   651-698   EGF-type module  
  0.0000000474   623-664   EGF-type module  
  0.00399   267-306   EGF-type module  
jgi|Dappu1|271340|SNAP_00039398   0.0000000198   59-103   EGF-type module  
jgi|Dappu1|300527|PASA_GEN_10000060   0.00000000326   2718-2757   EGF-type module  
  0.0000356   2680-2736   EGF-type module  
jgi|Dappu1|300823|PASA_GEN_1100127   0.000000000012   819-867   Laminin-type module  
  0.00000000153   333-398   Laminin-type module  
  0.00000000474   771-812   Laminin-type module  
  0.0000000067   1080-1126   Laminin-type module  
  0.00000000725   925-976   Laminin-type module  
  0.000000023   270-335   Laminin-type module  
  0.0000000446   974-1023   Laminin-type module  
  0.000000053   507-545   Laminin-type module  
  0.000000151   865-906   Laminin-type module  
  0.000000363   456-499   Laminin-type module  
  0.000000446   1026-1077   Laminin-type module  
  0.00000446   396-453   Laminin-type module  
  0.00000502   1129-1177   Laminin-type module  
jgi|Dappu1|301952|PASA_GEN_1500181   0.00000000000224   591-633   EGF-type module  
  0.0000000000307   477-520   EGF-type module  
  0.0000000000411   668-711   EGF-type module  
  0.00000000036   409-451   EGF-type module  
  0.000000000625   1711-1748   EGF-type module  
  0.000000000656   1836-1880   EGF-type module  
  0.000000000965   337-373   EGF-type module  
  0.00000000108   292-331   EGF-type module  
  0.000000121   368-408   EGF-type module  
  0.000000196   1803-1840   EGF-type module  
  0.00000022   1751-1801   EGF-type module  
  0.00000136   1362-1413   EGF-type module  
  0.0000119   126-173   EGF-type module  
  0.00013   446-481   EGF-type module  
  0.000135   748-774   EGF-type module  
  0.000146   1872-1903   EGF-type module  
  0.00434   1081-1120   EGF-type module  
  0.00879   1915-1963   EGF-type module  
jgi|Dappu1|303147|PASA_GEN_0200257   0.0000000251   208-257   EGF-type module  
  0.000000294   403-457   EGF-type module  
  0.0000021   451-490   EGF-type module  
  0.0171   1-27   EGF-type module  
jgi|Dappu1|303924|PASA_GEN_2400145   0.000000516   337-374   EGF-type module  
jgi|Dappu1|303927|PASA_GEN_2400149   0.0000000838   337-372   EGF-type module  
jgi|Dappu1|304927|PASA_GEN_3100030   0.00000000023   1044-1088   EGF-type module  
  0.000000000707   962-1003   EGF-type module  
  0.000000159   885-925   EGF-type module  
  0.000000174   1011-1048   EGF-type module  
  0.000000297   926-969   EGF-type module  
  0.0000165   1351-1392   EGF-type module  
jgi|Dappu1|305193|PASA_GEN_35000001   0.000000000379   297-344   EGF-type module  
  0.00000013   266-306   EGF-type module  
jgi|Dappu1|306243|PASA_GEN_4700050   0.000000726   711-756   EGF-type module  
  0.00000437   355-392   EGF-type module  
jgi|Dappu1|306454|PASA_GEN_0500120   0.000000000000742   136-182   EGF-type module  
  0.000121   94-129   EGF-type module  
jgi|Dappu1|306822|PASA_GEN_5300101   0.00000059   874-915   EGF-type module  
  0.00000112   778-824   EGF-type module  
  0.00000869   730-779   EGF-type module  
jgi|Dappu1|307561|PASA_GEN_6500041   0.000000000859   2877-2921   EGF-type module  
  0.000000148   1414-1470   EGF-type module  
  0.00000346   4123-4165   EGF-type module  
  0.00000621   4383-4419   EGF-type module  
  0.0000101   4289-4321   EGF-type module  
  0.0000128   1727-1778   EGF-like domain of nidogen-1  
  0.0000142   1101-1137   EGF-type module  
  0.0000211   2041-2089   EGF-type module  
  0.000033   2843-2876   EGF-type module  
  0.00004   4165-4197   EGF-type module  
  0.000129   3204-3258   EGF-type module  
  0.000867   3688-3718   EGF-type module  
  0.00188   1059-1101   EGF-type module  
  0.0122   4088-4120   EGF-type module  
jgi|Dappu1|308094|PASA_GEN_7400041   0.000000219   364-410   Laminin-type module  
  0.00000156   408-446   Laminin-type module  
jgi|Dappu1|308138|PASA_GEN_7500047   0.00000000549   196-239   EGF-type module  
  0.00000399   513-554   EGF-type module  
  0.0000227   826-866   EGF-type module  
  0.000803   1572-1601   EGF-type module  
  0.00652   168-203   EGF-type module  
jgi|Dappu1|309115|PASA_GEN_0900185   0.000000711   898-946   Laminin-type module  
  0.0176   209-236   Integrin beta EGF-like domains  
jgi|Dappu1|309290|PASA_GEN_9500013   0.000000123   408-446   Integrin beta EGF-like domains  
  0.000614   452-491   Integrin beta EGF-like domains  
jgi|Dappu1|310287|NCBI_GNO_0200224   0.0000000000251   597-641   EGF-type module  
  0.0000000733   899-954   EGF-type module  
  0.00105   1218-1271   EGF-type module  
  0.00215   294-335   EGF-type module  
jgi|Dappu1|310489|NCBI_GNO_0200428   0.0000349   329-372   EGF-type module  
  0.00119   229-268   EGF-type module  
jgi|Dappu1|310490|NCBI_GNO_0200429   0.0000562   281-324   EGF-type module  
  0.000885   717-759   EGF-type module  
  0.0179   186-218   EGF-type module  
jgi|Dappu1|311854|NCBI_GNO_0500022   0.000000000155   1416-1457   EGF-type module  
  0.00000921   2037-2075   Laminin-type module  
  0.0000147   1906-1942   EGF-type module  
  0.000313   1944-1988   EGF-type module  
jgi|Dappu1|313427|NCBI_GNO_0900053   0.00000344   24-64   EGF-type module  
jgi|Dappu1|313559|NCBI_GNO_0900185   0.00000000159   541-593   Laminin-type module  
  0.0000000781   1165-1214   Laminin-type module  
  0.000000212   786-835   Laminin-type module  
  0.000000222   591-643   Laminin-type module  
  0.000000837   483-534   Laminin-type module  
  0.00000837   833-877   Laminin-type module  
  0.0000153   643-684   Laminin-type module  
  0.0000314   690-739   Laminin-type module  
  0.000201   1267-1314   Laminin-type module  
  0.000204   164-194   Laminin-type module  
  0.00137   1221-1269   Laminin-type module  
  0.00335   738-783   Laminin-type module  
jgi|Dappu1|313913|NCBI_GNO_1000151   0.00000215   347-380   EGF-type module  
jgi|Dappu1|314322|NCBI_GNO_1100029   0.0000187   631-667   Merozoite surface protein 1 (MSP-1)  
jgi|Dappu1|315775|NCBI_GNO_1500123   0.000000000059   1532-1579   EGF-type module  
  0.000000000138   1495-1549   EGF-type module  
  0.000000000146   2178-2234   EGF-type module  
  0.000000000246   2290-2339   EGF-type module  
  0.00000000733   916-970   EGF-type module  
  0.0000000628   1333-1382   EGF-type module  
  0.0000000715   2137-2171   EGF-type module  
  0.000000408   1372-1418   EGF-type module  
  0.0000011   959-999   EGF-type module  
  0.0000285   811-845   EGF-type module  
  0.00023   53-85   EGF-type module  
  0.00361   20-51   EGF-type module  
jgi|Dappu1|317030|NCBI_GNO_1900027   0.000000000162   556-604   Laminin-type module  
  0.000000000614   1868-1920   Laminin-type module  
  0.00000000067   1476-1526   Laminin-type module  
  0.00000000271   1385-1433   Laminin-type module  
  0.00000000586   1918-1972   Laminin-type module  
  0.0000000126   464-512   Laminin-type module  
  0.0000000188   290-351   Laminin-type module  
  0.0000000195   1810-1862   Laminin-type module  
  0.0000000809   510-558   Laminin-type module  
  0.000000237   1524-1572   Laminin-type module  
  0.00000215   1437-1473   Laminin-type module  
  0.00000254   419-466   Laminin-type module  
  0.00000307   647-694   Laminin-type module  
  0.00000307   747-797   Laminin-type module  
  0.00000335   800-838   Laminin-type module  
  0.00000558   602-649   Laminin-type module  
  0.00000753   349-405   Laminin-type module  
  0.0000123   2018-2067   Laminin-type module  
  0.0000335   692-744   Laminin-type module  
  0.0000446   1971-2015   Laminin-type module  
  0.000279   2065-2110   Laminin-type module  
  0.0012   1775-1812   Laminin-type module  
jgi|Dappu1|317504|NCBI_GNO_2100073   0.000000000134   122-172   EGF-type module  
jgi|Dappu1|318862|NCBI_GNO_2600165   0.00000000117   578-616   EGF-type module  
  0.000000438   539-582   EGF-type module  
  0.000000931   349-387   EGF-type module  
  0.00038   312-349   EGF-type module  
jgi|Dappu1|319716|NCBI_GNO_3100013   0.0000000000733   190-234   EGF-type module  
  0.000000000171   108-149   EGF-type module  
  0.0000000402   31-71   EGF-type module  
  0.0000000805   150-188   EGF-type module  
  0.0000000958   73-116   EGF-type module  
  0.00000046   497-539   EGF-type module  
jgi|Dappu1|321251|NCBI_GNO_4000006   0.000012   85-122   EGF-type module  
  0.0000308   155-187   EGF-type module  
  0.0000457   123-154   EGF-type module  
jgi|Dappu1|321711|NCBI_GNO_4200089   0.000000000167   732-783   Laminin-type module  
  0.00000000053   944-994   Laminin-type module  
  0.00000000363   835-881   Laminin-type module  
  0.00000000368   285-348   EGF-type module  
  0.00000000419   448-497   Laminin-type module  
  0.000000209   401-450   Laminin-type module  
  0.000000314   890-941   Laminin-type module  
  0.000000314   992-1037   Laminin-type module  
  0.00000558   346-403   Laminin-type module  
  0.00000787   788-837   Laminin-type module  
  0.000607   695-734   EGF-type module  
jgi|Dappu1|327801|NCBI_GNO_9500037   0.000000186   1293-1337   EGF-type module  
  0.000008   986-1027   EGF-type module  
  0.00439   1599-1627   EGF-type module  
jgi|Dappu1|329129|NCBI_GNO_11500021   0.000000156   3924-3965   EGF-type module  
  0.00000887   3970-4007   EGF-type module  
  0.000661   3867-3931   EGF-type module  
jgi|Dappu1|330735|NCBI_GNO_14700002   0.0000479   1197-1233   EGF-type module  
  0.0158   358-397   EGF-type module  
jgi|Dappu1|332869|NCBI_GNO_21000021   0.000000004   1939-1985   EGF-type module  
  0.00000000544   191-238   EGF-type module  
  0.00000000821   1772-1824   EGF-type module  
  0.0000000996   396-431   EGF-type module  
  0.000000226   1004-1051   EGF-type module  
  0.00000185   2303-2352   EGF-type module  
  0.00000684   3063-3098   EGF-type module  
  0.0000199   446-492   EGF-type module  
  0.0000201   484-524   EGF-type module  
  0.0000239   711-755   EGF-type module  
  0.0000544   2-45   EGF-type module  
  0.00849   1437-1491   EGF-type module  
  0.00925   2964-2995   EGF-type module  
  0.0107   970-1015   EGF-type module  
  0.0243   1401-1454   EGF-type module  
  0.0336   1192-1232   EGF-type module  
  0.0378   781-820   EGF-type module  
  0.0399   1124-1156   EGF-type module  
  0.0431   1907-1954   EGF-type module  
  0.0839   2458-2493   EGF-type module  
  0.086   3157-3188   EGF-type module  
jgi|Dappu1|340225|NCBI_GNO_405500001   0.000018   39-76   EGF-type module  
jgi|Dappu1|34358|gw1.50.73.1   0.000000000123   66-115   EGF-type module  
  0.00000171   10-49   EGF-type module  
jgi|Dappu1|36077|gw1.4.981.1   0.000000974   3-36   EGF-type module  
  0.00000639   33-67   EGF-type module  
  0.00000963   67-98   EGF-type module  
  0.000677   100-128   EGF-type module  
jgi|Dappu1|37607|gw1.2421.4.1   0.00000379   2-33   EGF-type module  
  0.0000436   66-95   EGF-type module  
  0.0000628   34-65   EGF-type module  
jgi|Dappu1|39669|e_gw1.1.594.1   0.0000000000031   233-277   EGF-type module  
  0.0000000565   313-350   EGF-type module  
  0.000000385   202-239   EGF-type module  
  0.00000742   274-318   EGF-type module  
  0.000255   354-391   EGF-type module  
jgi|Dappu1|40490|e_gw1.2.36.1   0.0000809   482-517   Integrin beta EGF-like domains  
  0.00558   421-465   Integrin beta EGF-like domains  
jgi|Dappu1|42533|e_gw1.4.708.1   0.000000000315   133-170   EGF-type module  
  0.000159   92-142   EGF-type module  
jgi|Dappu1|43397|e_gw1.6.377.1   0.0000000118   3882-3939   EGF-type module  
  0.0000000153   3027-3065   EGF-type module  
  0.0000000453   3051-3099   EGF-type module  
  0.000000558   1269-1310   EGF-type module  
  0.00000724   1231-1275   EGF-type module  
  0.00000739   3371-3415   EGF-type module  
  0.0000904   4287-4322   EGF-type module  
  0.00247   843-888   EGF-type module  
  0.067   4240-4269   EGF-type module  
jgi|Dappu1|44521|e_gw1.7.344.1   0.000000000000945   87-127   EGF-type module  
  0.000000013   165-202   EGF-type module  
  0.000192   125-160   EGF-type module  
jgi|Dappu1|49862|e_gw1.20.118.1   0.00000000000746   617-659   EGF-type module  
  0.0000000000219   474-516   EGF-type module  
  0.000000000067   363-405   EGF-type module  
  0.00000000237   739-777   EGF-type module  
  0.00000000419   439-483   EGF-type module  
  0.000000042   271-316   EGF-type module  
  0.000000237   399-438   EGF-type module  
  0.000000566   515-558   EGF-type module  
  0.00000141   313-367   EGF-type module  
jgi|Dappu1|56315|e_gw1.55.40.1   0.000000000753   347-402   Laminin-type module  
  0.000000000837   291-349   Laminin-type module  
  0.000000167   410-450   Laminin-type module  
jgi|Dappu1|61886|e_gw1.108.26.1   0.000000000393   396-434   EGF-type module  
  0.0000000286   435-464   EGF-type module  
  0.0000000328   43-89   EGF-type module  
  0.0000000447   358-400   EGF-type module  
  0.000000584   5-42   EGF-type module  
jgi|Dappu1|63051|e_gw1.131.16.1   0.000000000237   407-449   EGF-type module  
  0.00000000385   372-415   EGF-type module  
  0.000000837   293-339   EGF-type module  
  0.00000164   335-369   EGF-type module  
 
Weak hits:
jgi|Dappu1|194717|estExt_Genewise1Plus.C_130353   0.00706   315-352   EGF-type module  
  0.0191   156-189   EGF-type module  
jgi|Dappu1|246514|SNAP_00014572   0.0753   97-130   EGF-type module  
jgi|Dappu1|248514|SNAP_00016572   0.000381   33-61   EGF-type module  
jgi|Dappu1|248813|SNAP_00016871   0.000251   348-377   EGF-type module  
jgi|Dappu1|301922|PASA_GEN_1500135   0.0838   551-586   EGF-type module  
jgi|Dappu1|303244|PASA_GEN_0200383   0.0293   171-197   Integrin beta EGF-like domains  
  0.0603   199-240   EGF-type module  
jgi|Dappu1|311054|NCBI_GNO_0300407   0.000221   340-380   EGF-type module  
jgi|Dappu1|313153|NCBI_GNO_0800102   0.0628   534-556   EGF-type module  
jgi|Dappu1|315400|NCBI_GNO_1400106   0.0126   3212-3236   Integrin beta EGF-like domains  
  0.0136   2471-2497   Integrin beta EGF-like domains  
  0.0293   639-672   EGF-type module  
  0.0628   988-1012   Integrin beta EGF-like domains  
jgi|Dappu1|323318|NCBI_GNO_5300046   0.00806   175-207   EGF-type module  
  0.00939   117-140   EGF-type module  
  0.0203   240-271   EGF-type module  
jgi|Dappu1|330316|NCBI_GNO_13800025   0.0134   364-391   Cripto EGF-like domain-like  
jgi|Dappu1|40362|e_gw1.2.317.1   0.000119   239-263   EGF-type module  
  0.000398   208-232   Integrin beta EGF-like domains  
  0.000537   308-334   Integrin beta EGF-like domains  
  0.00168   340-364   Integrin beta EGF-like domains  
  0.00454   368-402   EGF-type module  
  0.00838   143-167   Integrin beta EGF-like domains  
  0.0126   172-198   EGF-type module  
jgi|Dappu1|42869|e_gw1.5.2.1   0.00318   248-273   Integrin beta EGF-like domains  
  0.00394   68-92   Integrin beta EGF-like domains  
  0.0151   216-240   EGF-type module  
  0.0167   97-124   Integrin beta EGF-like domains  
  0.0435   146-171   Integrin beta EGF-like domains  
jgi|Dappu1|45366|e_gw1.9.14.1   0.00963   663-702   Integrin beta EGF-like domains  
jgi|Dappu1|47122|e_gw1.13.181.1   0.0419   278-328   Laminin-type module  
jgi|Dappu1|50861|e_gw1.24.335.1   0.0217   29-60   EGF-type module  
jgi|Dappu1|65192|e_gw1.210.8.1   0.000104   24-57   EGF-type module  
jgi|Dappu1|65219|e_gw1.210.12.1   0.00858   1-30   EGF-type module  
  0.0168   101-131   EGF-type module  
  0.0293   271-303   EGF-type module  

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View all assignments containing a EGF/Laminin domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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