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Plexin repeat superfamily domain assignments
in
Tetraodon nigroviridis 76_8

Assignment details

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Tetraodon nigroviridis 76_8 has 77 significant domains in 73 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTNIP00000000590   0.000000122   512-553   Plexin repeat  
ENSTNIP00000000675   0.00000000262   449-488   Plexin repeat  
ENSTNIP00000000963   0.000000000000249   52-103   Plexin repeat  
  0.0000994   351-386   Plexin repeat  
ENSTNIP00000001303   0.000000000102   517-568   Plexin repeat  
ENSTNIP00000001754   0.0000000000000136   24-81   Plexin repeat  
ENSTNIP00000001977   0.0000000000981   474-522   Plexin repeat  
ENSTNIP00000002265   0.0000000000128   469-513   Plexin repeat  
ENSTNIP00000002920   0.0000513   516-554   Plexin repeat  
ENSTNIP00000003045   0.000000000034   479-530   Plexin repeat  
ENSTNIP00000003173   0.0000000000000131   18-75   Plexin repeat  
ENSTNIP00000003359   0.000000000113   449-491   Plexin repeat  
ENSTNIP00000003728   0.0000000192   516-561   Plexin repeat  
ENSTNIP00000003980   0.0000000209   515-560   Plexin repeat  
ENSTNIP00000004009   0.0000000000000131   14-71   Plexin repeat  
ENSTNIP00000004467   0.0000000000698   479-530   Plexin repeat  
ENSTNIP00000005769   0.0000000000767   517-568   Plexin repeat  
ENSTNIP00000006346   0.00000733   1-32   Plexin repeat  
ENSTNIP00000006537   0.0000000000000262   10-60   Plexin repeat  
ENSTNIP00000006766   0.0000000000131   505-554   Plexin repeat  
  0.0000628   803-839   Plexin repeat  
ENSTNIP00000006767   0.0000000000131   498-547   Plexin repeat  
  0.0000628   796-832   Plexin repeat  
ENSTNIP00000006905   0.0000000174   483-523   Plexin repeat  
ENSTNIP00000007283   0.00000000000558   200-252   Plexin repeat  
ENSTNIP00000007472   0.000000000000471   99-151   Plexin repeat  
ENSTNIP00000007545   0.00000000227   451-502   Plexin repeat  
ENSTNIP00000007602   0.000000000000746   57-109   Plexin repeat  
  0.0105   209-242   Plexin repeat  
ENSTNIP00000007745   0.00000000000628   31-82   Plexin repeat  
ENSTNIP00000007746   0.0000000000523   518-569   Plexin repeat  
ENSTNIP00000008003   0.0000000000244   477-526   Plexin repeat  
ENSTNIP00000008069   0.0000262   516-560   Plexin repeat  
ENSTNIP00000008341   0.0000401   211-245   Plexin repeat  
ENSTNIP00000008570   0.0000209   276-322   Plexin repeat  
ENSTNIP00000008912   0.000000113   512-554   Plexin repeat  
ENSTNIP00000008925   0.00000000379   499-528   Plexin repeat  
ENSTNIP00000009146   0.000000000000458   102-154   Plexin repeat  
  0.0034   257-298   Plexin repeat  
ENSTNIP00000009492   0.00000000000518   26-80   Plexin repeat  
ENSTNIP00000009702   0.0000000785   66-105   Plexin repeat  
ENSTNIP00000009728   0.000000000000241   23-81   Plexin repeat  
ENSTNIP00000010138   0.0000000000212   510-554   Plexin repeat  
ENSTNIP00000010140   0.0000000000488   479-530   Plexin repeat  
ENSTNIP00000010322   0.000000000000406   499-552   Plexin repeat  
ENSTNIP00000010401   0.000000000000249   52-103   Plexin repeat  
  0.0000994   354-389   Plexin repeat  
ENSTNIP00000010795   0.000000000011   35-93   Plexin repeat  
ENSTNIP00000010993   0.00000000000549   450-501   Plexin repeat  
ENSTNIP00000011250   0.0000000262   366-399   Plexin repeat  
ENSTNIP00000011508   0.000000000144   458-503   Plexin repeat  
ENSTNIP00000011569   0.000000000068   26-84   Plexin repeat  
ENSTNIP00000012348   0.000000000000785   22-78   Plexin repeat  
ENSTNIP00000012396   0.0000000209   516-561   Plexin repeat  
ENSTNIP00000013604   0.000000134   522-554   Plexin repeat  
ENSTNIP00000013957   0.0000000000366   479-530   Plexin repeat  
ENSTNIP00000014313   0.0000000000196   505-555   Plexin repeat  
ENSTNIP00000014344   0.0000000000968   517-568   Plexin repeat  
ENSTNIP00000014490   0.00000000000023   31-88   Plexin repeat  
ENSTNIP00000014525   0.000000000000241   19-77   Plexin repeat  
ENSTNIP00000014673   0.0000000000000157   20-77   Plexin repeat  
ENSTNIP00000016162   0.00000000000123   496-544   Plexin repeat  
ENSTNIP00000017446   0.000000000227   461-499   Plexin repeat  
ENSTNIP00000017783   0.0000000000131   507-551   Plexin repeat  
ENSTNIP00000017785   0.0000000000732   508-559   Plexin repeat  
ENSTNIP00000018397   0.000000000000719   448-498   Plexin repeat  
ENSTNIP00000018398   0.00000000000123   506-557   Plexin repeat  
ENSTNIP00000018402   0.00000000419   516-564   Plexin repeat  
ENSTNIP00000018775   0.00000000000558   451-501   Plexin repeat  
ENSTNIP00000019061   0.0000000000432   455-503   Plexin repeat  
  0.017   753-786   Plexin repeat  
ENSTNIP00000019147   0.0000000000123   519-566   Plexin repeat  
ENSTNIP00000019148   0.0000000000131   523-570   Plexin repeat  
ENSTNIP00000019805   0.0000000148   514-561   Plexin repeat  
ENSTNIP00000019881   0.00000000000523   465-512   Plexin repeat  
ENSTNIP00000021085   0.00000000101   536-589   Plexin repeat  
  0.0419   850-882   Plexin repeat  
ENSTNIP00000022396   0.000000000000959   350-404   Plexin repeat  
ENSTNIP00000022397   0.0000000000279   516-567   Plexin repeat  
ENSTNIP00000022398   0.000000000127   525-576   Plexin repeat  
ENSTNIP00000022440   0.0000000000785   468-516   Plexin repeat  
 
Weak hits:
ENSTNIP00000003039   0.000173   4-36   Plexin repeat  
ENSTNIP00000003269   0.000118   212-257   Plexin repeat  
ENSTNIP00000003610   0.000167   4-36   Plexin repeat  
ENSTNIP00000005586   0.00146   244-283   Plexin repeat  
ENSTNIP00000006699   0.0209   523-560   Plexin repeat  
ENSTNIP00000011807   0.0889   141-171   Plexin repeat  
ENSTNIP00000013401   0.0955   400-433   Plexin repeat  
ENSTNIP00000013467   0.00167   903-937   Plexin repeat  
  0.0392   624-651   Plexin repeat  
ENSTNIP00000016728   0.0432   354-391   Plexin repeat  
ENSTNIP00000020350   0.00994   38-65   Plexin repeat  

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Select to display   Genome       Domains   Proteins
No Yes ALL   45094 45094
No Yes Homo sapiens 76_38 Human 143 139
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 76_3.1 Western gorilla 58 54
No Yes Pongo abelii 76_2 Sumatran orangutan 43 40
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 42 40
No Yes Papio anubis 76 Olive baboon 47 45
No Yes Macaca mulatta 76_1 Rhesus monkey 66 63
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 90 87
No Yes Otolemur garnettii 76_3 Small-eared galago 39 37
No Yes Microcebus murinus 76_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 76_5.0 Norway rat 44 42
No Yes Mus musculus 76_38 House mouse 96 93
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 44 41
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 40 36
No Yes Cavia porcellus 76_3 Domestic guinea pig 42 40
No Yes Oryctolagus cuniculus 76_2 Rabbit 42 39
No Yes Ochotona princeps 76 American pika 29 27
No Yes Tupaia belangeri 76 Northern tree shrew 22 22
No Yes Sus scrofa 76_10.2 Pig 41 40
No Yes Bos taurus 76_3.1 Cattle 39 37
No Yes Ovis aries 76_3.1 Sheep 42 41
No Yes Vicugna pacos 76_1 Alpaca 14 14
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 76_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 76_1 Giant panda 49 46
No Yes Canis familiaris 76_3.1 Dog 51 47
No Yes Felis catus 76_6.2 Domestic cat 40 38
No Yes Equus caballus 76_2 Horse 54 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 76_1 Large flying fox 39 38
No Yes Sorex araneus 76_1 European shrew 23 23
No Yes Erinaceus europaeus 76 Western European hedgehog 22 21
No Yes Procavia capensis 76_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 76_3 African savanna elephant 60 53
No Yes Echinops telfairi 76 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 45 42
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 76_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 49 47
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 38 37
No Yes Ornithorhynchus anatinus 76_5 Platypus 30 30
No Yes Saccoglossus kowalevskii v3.0   12 12
No Yes Petromyzon marinus 76_7.0 Sea lamprey 17 17
No Yes Meleagris gallopavo 76_2 Turkey 36 34
No Yes Gallus gallus 76_4 Chicken 39 36
No Yes Anas platyrhynchos 76_1.0 Mallard 30 28
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 33 31
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 36 34
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 46 43
No Yes Anolis carolinensis 76_2.0 Green anole 40 37
No Yes Xenopus laevis African clawed frog 52 48
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 45 41
No Yes Latimeria chalumnae 76_1 Coelacanth 41 40
No Yes Lepisosteus oculatus 76 Spotted gar 59 56
No Yes Gadus morhua 76_1 Atlantic cod 56 53
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 77 73
No Yes Takifugu rubripes 76_4 Torafugu 308 286
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 75 70
No Yes Oryzias latipes 76_1 Japanese medaka 82 73
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 64 60
No Yes Poecilia formosa 76 Amazon molly 69 65
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 94 87
No Yes Astyanax mexicanus 76 Mexican tetra 60 56
No Yes Danio rerio 76_9 Zebrafish 103 100
No Yes Oikopleura dioica   6 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 34 32
No Yes Adineta vaga   6 6
No Yes Octopus bimaculoides 280   13 12
No Yes Crassostrea gigas 22 Pacific oyster 16 15
No Yes Lottia gigantea Owl limpet 12 10
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   8 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 9 9
No Yes Heliconius melpomene Postman butterfly 8 7
No Yes Bombyx mori Domestic silkworm 6 5
No Yes Nasonia vitripennis Jewel wasp 10 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 21 21
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 9
No Yes Linepithema humile v1.1 Argentine ant 9 9
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 9 8
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 8 7
No Yes Atta cephalotes v1.1   8 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 7
No Yes Lucilia cuprina Australian sheep blowfly 7 6
No Yes Drosophila grimshawi 1.3   10 9
No Yes Drosophila willistoni 1.3   9 8
No Yes Drosophila pseudoobscura 2.13   10 8
No Yes Drosophila persimilis 1.3   10 8
No Yes Drosophila suzukii   9 8
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   9 8
No Yes Drosophila melanogaster 76_5 Fruit fly 27 25
No Yes Drosophila erecta 1.3   8 8
No Yes Drosophila ananassae 1.3   8 7
No Yes Drosophila virilis 1.2   8 8
No Yes Drosophila mojavensis 1.3   9 8
No Yes Megaselia scalaris 22   5 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 10 9
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 8
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 8
No Yes Tribolium castaneum 3.0 Red flour beetle 8 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 8 8
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   6 5
No Yes Daphnia pulex Common water flea 9 8
No Yes Strigamia maritima 22   9 8
No Yes Sarcoptes scabiei   7 6
No Yes Tetranychus urticae Two-spotted spider mite 7 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 6
No Yes Pristionchus pacificus   4 3
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   6 6
No Yes Caenorhabditis brenneri   9 8
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 11 11
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   9 9
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 9 9
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 9 8
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   20 20
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Cyanophora paradoxa   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 53 48
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 21 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 9 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Homo sapiens 75_37 (old version GRC) Human 164 159
No Yes Homo sapiens (NCBI version) Human 67 64
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 42 40
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 7 7
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 7 7
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 5
No Yes Homo sapiens 69_37 Human 43 40
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 69_3.1 Western gorilla 40 38
No Yes Pongo abelii 69_2 Sumatran orangutan 41 38
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 39 37
No Yes Macaca mulatta 69_1 Rhesus monkey 40 37
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 43 42
No Yes Otolemur garnettii 69_3 Small-eared galago 39 37
No Yes Microcebus murinus 69_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 69_3.4 Norway rat 41 39
No Yes Mus musculus 69_38 House mouse 42 40
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 42 39
No Yes Cavia porcellus 69_3 Domestic guinea pig 41 39
No Yes Oryctolagus cuniculus 69_2 Rabbit 38 36
No Yes Ochotona princeps 69 American pika 29 27
No Yes Tupaia belangeri 69 Northern tree shrew 22 22
No Yes Sus scrofa 69_10.2 Pig 28 27
No Yes Bos taurus 69_3.1 Cattle 38 36
No Yes Vicugna pacos 69_1 Alpaca 14 14
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 69_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 69_1 Giant panda 40 38
No Yes Canis familiaris 69_3.1 Dog 42 39
No Yes Felis catus 69 Domestic cat 29 28
No Yes Equus caballus 69_2 Horse 40 37
No Yes Myotis lucifugus 69_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 69_1 Large flying fox 39 38
No Yes Sorex araneus 69_1 European shrew 23 23
No Yes Erinaceus europaeus 69 Western European hedgehog 22 21
No Yes Procavia capensis 69_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 69_3 African savanna elephant 40 37
No Yes Echinops telfairi 69 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 19
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 69_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 37 35
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 37 36
No Yes Ornithorhynchus anatinus 69_5 Platypus 28 28
No Yes Petromyzon marinus 69_7.0 Sea lamprey 16 16
No Yes Meleagris gallopavo 69_2 Turkey 33 31
No Yes Gallus gallus 69_2 Chicken 33 31
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 33 31
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 33 31
No Yes Anolis carolinensis 69_2.0 Green anole 39 37
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 37 34
No Yes Latimeria chalumnae 69_1 Coelacanth 34 33
No Yes Gadus morhua 69_1 Atlantic cod 52 49
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 56 54
No Yes Takifugu rubripes 69_4 Torafugu 63 59
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 61 56
No Yes Oryzias latipes 69_1 Japanese medaka 62 56
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 64 60
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 67 62
No Yes Danio rerio 69_9 Zebrafish 65 63
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 9 8
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes NCBI 2017_08 genome   22733 21607
No Yes STRING v9.0.5 (STRING)   1251 1175
No Yes Uniprot 2018_03 genome   11027 10407
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   192 179
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   197 197
No Yes TargetDB (Targets)   64 62
No Yes UniProt viral sequences (Viral)   8 8

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