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Plexin repeat superfamily domain assignments
in
Poecilia formosa 76

Assignment details

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Poecilia formosa 76 has 69 significant domains in 65 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPFOP00000000138   0.000000016   505-545   Plexin repeat  
ENSPFOP00000000891   0.00000000012   518-569   Plexin repeat  
ENSPFOP00000000990   0.000000000144   518-569   Plexin repeat  
ENSPFOP00000001052   0.00000000000549   496-547   Plexin repeat  
ENSPFOP00000001450   0.000000000392   33-86   Plexin repeat  
ENSPFOP00000001477   0.000000366   522-554   Plexin repeat  
ENSPFOP00000001613   0.00000000000593   493-540   Plexin repeat  
ENSPFOP00000001992   0.000000192   526-573   Plexin repeat  
ENSPFOP00000002530   0.00000000000131   501-552   Plexin repeat  
  0.0314   655-688   Plexin repeat  
  0.0767   1088-1124   Plexin repeat  
ENSPFOP00000002691   0.0000000000349   518-569   Plexin repeat  
ENSPFOP00000002720   0.00000000314   453-500   Plexin repeat  
ENSPFOP00000002836   0.00000000173   514-561   Plexin repeat  
ENSPFOP00000002912   0.000000000262   534-585   Plexin repeat  
ENSPFOP00000002968   0.0000000000108   457-508   Plexin repeat  
  0.0331   613-648   Plexin repeat  
ENSPFOP00000003024   0.000000000000942   528-579   Plexin repeat  
ENSPFOP00000003048   0.00000000916   472-505   Plexin repeat  
ENSPFOP00000003091   0.0000000000654   492-544   Plexin repeat  
ENSPFOP00000003259   0.0000000000296   406-457   Plexin repeat  
ENSPFOP00000003387   0.0000000000244   295-346   Plexin repeat  
ENSPFOP00000003490   0.0000000000654   482-534   Plexin repeat  
ENSPFOP00000003753   0.000000000061   551-602   Plexin repeat  
ENSPFOP00000004145   0.00000000000615   510-555   Plexin repeat  
ENSPFOP00000004201   0.000000000000272   73-131   Plexin repeat  
ENSPFOP00000004651   0.0000000000837   515-566   Plexin repeat  
ENSPFOP00000005820   0.000000000000576   531-581   Plexin repeat  
  0.0000471   830-862   Plexin repeat  
ENSPFOP00000005890   0.000000767   467-499   Plexin repeat  
ENSPFOP00000006229   0.000000000366   514-564   Plexin repeat  
ENSPFOP00000006472   0.000000000034   494-544   Plexin repeat  
ENSPFOP00000006830   0.000000000000275   500-552   Plexin repeat  
ENSPFOP00000007022   0.0000000000549   509-553   Plexin repeat  
ENSPFOP00000007136   0.0000000000119   496-531   Plexin repeat  
ENSPFOP00000007861   0.00000000000126   34-92   Plexin repeat  
ENSPFOP00000008426   0.0000000977   90-129   Plexin repeat  
ENSPFOP00000009620   0.000000000331   518-553   Plexin repeat  
ENSPFOP00000009873   0.0000000000000382   28-86   Plexin repeat  
ENSPFOP00000010382   0.00000000068   20-70   Plexin repeat  
ENSPFOP00000010469   0.00000000000732   472-521   Plexin repeat  
  0.0331   777-812   Plexin repeat  
ENSPFOP00000011354   0.00000324   525-567   Plexin repeat  
ENSPFOP00000012335   0.0000000192   516-564   Plexin repeat  
ENSPFOP00000012607   0.000000000000157   471-523   Plexin repeat  
  0.0133   626-663   Plexin repeat  
ENSPFOP00000012697   0.0000000000068   507-547   Plexin repeat  
ENSPFOP00000013494   0.00000000000209   528-579   Plexin repeat  
  0.00000327   824-858   Plexin repeat  
ENSPFOP00000014191   0.0000000000296   516-568   Plexin repeat  
ENSPFOP00000014452   0.00000000222   517-556   Plexin repeat  
ENSPFOP00000015443   0.000000174   443-477   Plexin repeat  
ENSPFOP00000015690   0.0000000000523   34-89   Plexin repeat  
ENSPFOP00000016269   0.00000000000131   523-573   Plexin repeat  
  0.00000353   819-853   Plexin repeat  
ENSPFOP00000016571   0.0000262   337-383   Plexin repeat  
ENSPFOP00000016575   0.00000000000549   508-553   Plexin repeat  
ENSPFOP00000016654   0.0000000014   483-515   Plexin repeat  
ENSPFOP00000016688   0.0000000000171   507-558   Plexin repeat  
ENSPFOP00000016691   0.000000000174   513-556   Plexin repeat  
ENSPFOP00000016913   0.000000000034   509-560   Plexin repeat  
ENSPFOP00000017069   0.0000401   299-344   Plexin repeat  
ENSPFOP00000017415   0.0000000000119   514-565   Plexin repeat  
ENSPFOP00000017604   0.0000000000146   31-89   Plexin repeat  
ENSPFOP00000017695   0.00000000000471   488-536   Plexin repeat  
ENSPFOP00000017820   0.00000000698   520-568   Plexin repeat  
ENSPFOP00000018025   0.00000000000353   496-546   Plexin repeat  
  0.0000327   795-831   Plexin repeat  
ENSPFOP00000018094   0.0000000000000303   49-106   Plexin repeat  
ENSPFOP00000018431   0.000000000222   462-501   Plexin repeat  
ENSPFOP00000018528   0.0000000000419   518-573   Plexin repeat  
ENSPFOP00000018593   0.0000000000314   518-569   Plexin repeat  
ENSPFOP00000018654   0.0000000000855   555-607   Plexin repeat  
ENSPFOP00000018672   0.0000000012   27-77   Plexin repeat  
 
Weak hits:
ENSPFOP00000000473   0.0575   488-518   Plexin repeat  
ENSPFOP00000001497   0.0855   255-285   Plexin repeat  
ENSPFOP00000002045   0.000314   268-302   Plexin repeat  
ENSPFOP00000003151   0.000458   178-223   Plexin repeat  
ENSPFOP00000008706   0.0222   237-275   Plexin repeat  
ENSPFOP00000016035   0.0246   33-61   Plexin repeat  
ENSPFOP00000019385   0.0246   138-180   Plexin repeat  

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Select to display   Genome       Domains   Proteins
No Yes ALL   45094 45094
No Yes Homo sapiens 76_38 Human 143 139
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 76_3.1 Western gorilla 58 54
No Yes Pongo abelii 76_2 Sumatran orangutan 43 40
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 42 40
No Yes Papio anubis 76 Olive baboon 47 45
No Yes Macaca mulatta 76_1 Rhesus monkey 66 63
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 90 87
No Yes Otolemur garnettii 76_3 Small-eared galago 39 37
No Yes Microcebus murinus 76_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 76_5.0 Norway rat 44 42
No Yes Mus musculus 76_38 House mouse 96 93
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 44 41
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 40 36
No Yes Cavia porcellus 76_3 Domestic guinea pig 42 40
No Yes Oryctolagus cuniculus 76_2 Rabbit 42 39
No Yes Ochotona princeps 76 American pika 29 27
No Yes Tupaia belangeri 76 Northern tree shrew 22 22
No Yes Sus scrofa 76_10.2 Pig 41 40
No Yes Bos taurus 76_3.1 Cattle 39 37
No Yes Ovis aries 76_3.1 Sheep 42 41
No Yes Vicugna pacos 76_1 Alpaca 14 14
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 76_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 76_1 Giant panda 49 46
No Yes Canis familiaris 76_3.1 Dog 51 47
No Yes Felis catus 76_6.2 Domestic cat 40 38
No Yes Equus caballus 76_2 Horse 54 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 76_1 Large flying fox 39 38
No Yes Sorex araneus 76_1 European shrew 23 23
No Yes Erinaceus europaeus 76 Western European hedgehog 22 21
No Yes Procavia capensis 76_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 76_3 African savanna elephant 60 53
No Yes Echinops telfairi 76 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 45 42
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 76_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 49 47
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 38 37
No Yes Ornithorhynchus anatinus 76_5 Platypus 30 30
No Yes Saccoglossus kowalevskii v3.0   12 12
No Yes Petromyzon marinus 76_7.0 Sea lamprey 17 17
No Yes Meleagris gallopavo 76_2 Turkey 36 34
No Yes Gallus gallus 76_4 Chicken 39 36
No Yes Anas platyrhynchos 76_1.0 Mallard 30 28
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 33 31
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 36 34
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 46 43
No Yes Anolis carolinensis 76_2.0 Green anole 40 37
No Yes Xenopus laevis African clawed frog 52 48
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 45 41
No Yes Latimeria chalumnae 76_1 Coelacanth 41 40
No Yes Lepisosteus oculatus 76 Spotted gar 59 56
No Yes Gadus morhua 76_1 Atlantic cod 56 53
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 77 73
No Yes Takifugu rubripes 76_4 Torafugu 308 286
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 75 70
No Yes Oryzias latipes 76_1 Japanese medaka 82 73
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 64 60
No Yes Poecilia formosa 76 Amazon molly 69 65
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 94 87
No Yes Astyanax mexicanus 76 Mexican tetra 60 56
No Yes Danio rerio 76_9 Zebrafish 103 100
No Yes Oikopleura dioica   6 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 34 32
No Yes Adineta vaga   6 6
No Yes Octopus bimaculoides 280   13 12
No Yes Crassostrea gigas 22 Pacific oyster 16 15
No Yes Lottia gigantea Owl limpet 12 10
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   8 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 9 9
No Yes Heliconius melpomene Postman butterfly 8 7
No Yes Bombyx mori Domestic silkworm 6 5
No Yes Nasonia vitripennis Jewel wasp 10 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 21 21
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 9
No Yes Linepithema humile v1.1 Argentine ant 9 9
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 9 8
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 8 7
No Yes Atta cephalotes v1.1   8 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 7
No Yes Lucilia cuprina Australian sheep blowfly 7 6
No Yes Drosophila grimshawi 1.3   10 9
No Yes Drosophila willistoni 1.3   9 8
No Yes Drosophila pseudoobscura 2.13   10 8
No Yes Drosophila persimilis 1.3   10 8
No Yes Drosophila suzukii   9 8
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   9 8
No Yes Drosophila melanogaster 76_5 Fruit fly 27 25
No Yes Drosophila erecta 1.3   8 8
No Yes Drosophila ananassae 1.3   8 7
No Yes Drosophila virilis 1.2   8 8
No Yes Drosophila mojavensis 1.3   9 8
No Yes Megaselia scalaris 22   5 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 10 9
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 8
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 8
No Yes Tribolium castaneum 3.0 Red flour beetle 8 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 8 8
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   6 5
No Yes Daphnia pulex Common water flea 9 8
No Yes Strigamia maritima 22   9 8
No Yes Sarcoptes scabiei   7 6
No Yes Tetranychus urticae Two-spotted spider mite 7 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 6
No Yes Pristionchus pacificus   4 3
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   6 6
No Yes Caenorhabditis brenneri   9 8
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 11 11
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   9 9
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 9 9
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 9 8
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   20 20
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Cyanophora paradoxa   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 53 48
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 21 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 9 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Homo sapiens 75_37 (old version GRC) Human 164 159
No Yes Homo sapiens (NCBI version) Human 67 64
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 42 40
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 7 7
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 7 7
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 5
No Yes Homo sapiens 69_37 Human 43 40
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 69_3.1 Western gorilla 40 38
No Yes Pongo abelii 69_2 Sumatran orangutan 41 38
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 39 37
No Yes Macaca mulatta 69_1 Rhesus monkey 40 37
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 43 42
No Yes Otolemur garnettii 69_3 Small-eared galago 39 37
No Yes Microcebus murinus 69_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 69_3.4 Norway rat 41 39
No Yes Mus musculus 69_38 House mouse 42 40
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 42 39
No Yes Cavia porcellus 69_3 Domestic guinea pig 41 39
No Yes Oryctolagus cuniculus 69_2 Rabbit 38 36
No Yes Ochotona princeps 69 American pika 29 27
No Yes Tupaia belangeri 69 Northern tree shrew 22 22
No Yes Sus scrofa 69_10.2 Pig 28 27
No Yes Bos taurus 69_3.1 Cattle 38 36
No Yes Vicugna pacos 69_1 Alpaca 14 14
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 69_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 69_1 Giant panda 40 38
No Yes Canis familiaris 69_3.1 Dog 42 39
No Yes Felis catus 69 Domestic cat 29 28
No Yes Equus caballus 69_2 Horse 40 37
No Yes Myotis lucifugus 69_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 69_1 Large flying fox 39 38
No Yes Sorex araneus 69_1 European shrew 23 23
No Yes Erinaceus europaeus 69 Western European hedgehog 22 21
No Yes Procavia capensis 69_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 69_3 African savanna elephant 40 37
No Yes Echinops telfairi 69 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 19
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 69_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 37 35
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 37 36
No Yes Ornithorhynchus anatinus 69_5 Platypus 28 28
No Yes Petromyzon marinus 69_7.0 Sea lamprey 16 16
No Yes Meleagris gallopavo 69_2 Turkey 33 31
No Yes Gallus gallus 69_2 Chicken 33 31
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 33 31
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 33 31
No Yes Anolis carolinensis 69_2.0 Green anole 39 37
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 37 34
No Yes Latimeria chalumnae 69_1 Coelacanth 34 33
No Yes Gadus morhua 69_1 Atlantic cod 52 49
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 56 54
No Yes Takifugu rubripes 69_4 Torafugu 63 59
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 61 56
No Yes Oryzias latipes 69_1 Japanese medaka 62 56
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 64 60
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 67 62
No Yes Danio rerio 69_9 Zebrafish 65 63
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 9 8
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes NCBI 2017_08 genome   22733 21607
No Yes STRING v9.0.5 (STRING)   1251 1175
No Yes Uniprot 2018_03 genome   11027 10407
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   192 179
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   197 197
No Yes TargetDB (Targets)   64 62
No Yes UniProt viral sequences (Viral)   8 8

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