SUPERFAMILY 1.75 HMM library and genome assignments server

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FnI-like domain superfamily domain assignments
in
Homo sapiens

Assignment details

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Homo sapiens (NCBI version) has 201 significant domains in 59 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|10092639|ref|NP_057525.1|   0.0000000000000774   813-877   VWC domain  
  0.000000000000335   401-459   VWC domain  
  0.00000000000722   679-736   VWC domain  
  0.0000000000157   320-393   VWC domain  
  0.00000000022   753-812   VWC domain  
  0.00000000272   601-666   VWC domain  
gi|109150416|ref|NP_036425.1|   0.00000000000167   1414-1472   VWC domain  
gi|110349772|ref|NP_000079.2|   0.000000000000115   39-97   VWC domain  
gi|111118976|ref|NP_001835.3|   0.000000000000136   26-91   VWC domain  
gi|114431244|ref|NP_689931.2|   0.00000000000262   678-744   VWC domain  
  0.000000000178   628-687   VWC domain  
  0.000000000209   493-561   VWC domain  
  0.000000000617   384-441   VWC domain  
  0.000000023   567-625   VWC domain  
  0.0000000607   434-496   VWC domain  
gi|116284392|ref|NP_002448.2|   0.0000199   344-391   VWC domain  
  0.0000314   4920-4996   VWC domain  
  0.000126   820-862   VWC domain  
  0.0126   710-752   Fibronectin type I module  
  0.0282   1187-1224   VWC domain  
gi|122937446|ref|NP_001073969.1|   0.00000000178   103-173   VWC domain  
  0.0023   51-111   Fibronectin type I module  
  0.023   172-217   VWC domain  
gi|126517478|ref|NP_653252.3|   0.0000000000105   1393-1452   VWC domain  
gi|134031945|ref|NP_940857.2|   0.000000471   2945-3001   Fibronectin type I module  
  0.00000272   4976-5043   VWC domain  
  0.000178   1962-2024   VWC domain  
  0.00045   974-1015   VWC domain  
  0.00091   4209-4270   VWC domain  
gi|16933542|ref|NP_002017.1|   0.00000000000000811   557-603   Fibronectin type I module  
  0.000000000000017   2218-2261   Fibronectin type I module  
  0.0000000000000301   515-559   Fibronectin type I module  
  0.000000000000111   230-274   Fibronectin type I module  
  0.000000000000157   467-508   Fibronectin type I module  
  0.000000000000249   93-138   Fibronectin type I module  
  0.000000000000488   2173-2216   Fibronectin type I module  
  0.000000000000602   184-227   Fibronectin type I module  
  0.00000000000236   49-90   Fibronectin type I module  
  0.0000000000034   141-181   Fibronectin type I module  
  0.0000000000144   2261-2302   Fibronectin type I module  
  0.000000000114   306-344   Fibronectin type I module  
gi|209571519|ref|NP_001129386.1|   0.0000000000000293   416-485   VWC domain  
  0.0000000000000534   243-308   VWC domain  
  0.0000000000000889   1084-1145   VWC domain  
  0.00000000000481   132-193   VWC domain  
  0.00000000000806   532-599   VWC domain  
  0.0000000000199   710-776   VWC domain  
  0.0000000000575   887-952   VWC domain  
  0.000000000115   829-896   VWC domain  
  0.000000000387   362-423   VWC domain  
  0.0000000022   193-250   VWC domain  
  0.00000000282   475-536   VWC domain  
  0.0000000045   653-706   VWC domain  
  0.00000000858   301-356   Fibronectin type I module  
  0.0000000115   946-1021   VWC domain  
  0.0000000178   769-825   VWC domain  
  0.00000282   1035-1080   VWC domain  
  0.0000136   598-659   VWC domain  
  0.000023   88-128   VWC domain  
gi|209571521|ref|NP_955381.2|   0.0000000000000251   301-366   VWC domain  
  0.0000000000000324   474-542   VWC domain  
  0.0000000000009   182-251   VWC domain  
  0.00000000000105   242-308   VWC domain  
  0.00000000000387   590-657   VWC domain  
  0.00000000000534   132-190   VWC domain  
  0.000000000314   714-779   VWC domain  
  0.000000000555   420-482   VWC domain  
  0.00000000439   359-414   Fibronectin type I module  
  0.0000000523   536-594   VWC domain  
  0.00000241   663-720   VWC domain  
  0.0000103   88-129   VWC domain  
gi|221316561|ref|NP_001137453.1|   0.00000000000303   114-181   VWC domain  
  0.00000000000471   258-325   VWC domain  
  0.00000000018   35-102   VWC domain  
gi|221316563|ref|NP_001137454.1|   0.00000000000398   113-180   VWC domain  
  0.00000000000471   257-324   VWC domain  
  0.00000000023   35-101   VWC domain  
gi|222352164|ref|NP_006148.2|   0.000000000022   267-333   VWC domain  
  0.00000000513   682-754   VWC domain  
  0.00000628   334-391   VWC domain  
  0.0837   765-802   VWC domain  
gi|222352166|ref|NP_963845.1|   0.0000000000408   267-333   VWC domain  
  0.00000000408   635-707   VWC domain  
  0.00000502   334-391   VWC domain  
  0.000167   577-640   VWC domain  
  0.0649   718-755   VWC domain  
gi|223029470|ref|NP_001138579.1|   0.00000000115   318-382   VWC domain  
  0.00000000691   738-810   VWC domain  
  0.000241   374-447   VWC domain  
gi|223029472|ref|NP_001138580.1|   0.00000000105   268-332   VWC domain  
  0.00000000586   688-760   VWC domain  
  0.000178   324-398   VWC domain  
gi|223029474|ref|NP_001138581.1|   0.00000000115   267-331   VWC domain  
  0.00000000565   687-759   VWC domain  
  0.000188   323-397   VWC domain  
gi|223029476|ref|NP_001138582.1|   0.00000000136   291-355   VWC domain  
  0.00000000544   711-783   VWC domain  
  0.000481   356-421   VWC domain  
gi|256000767|ref|NP_079350.5|   0.00000000000209   81-154   VWC domain  
  0.0000000000544   152-217   VWC domain  
  0.0000000000806   219-280   VWC domain  
  0.000000000816   272-344   VWC domain  
  0.0000000251   26-88   VWC domain  
  0.000000785   368-421   VWC domain  
gi|260654089|ref|NP_940972.2|   0.000000000628   214-275   VWC domain  
  0.00045   153-213   Fibronectin type I module  
  0.0534   278-323   Fibronectin type I module  
gi|260763979|ref|NP_001159605.1|   0.000000000000963   81-154   VWC domain  
  0.0000000000251   152-217   VWC domain  
  0.0000000000366   219-280   VWC domain  
  0.000000000366   272-344   VWC domain  
  0.0000000115   26-88   VWC domain  
  0.000000429   368-421   VWC domain  
gi|291084494|ref|NP_001137455.2|   0.00000000000349   178-245   VWC domain  
  0.0000000000131   35-101   VWC domain  
gi|30089980|ref|NP_003732.2|   0.0000000000000104   703-764   VWC domain  
  0.000000136   49-127   VWC domain  
  0.000000429   782-851   VWC domain  
  0.0000209   870-933   VWC domain  
gi|301172750|ref|NP_002449.2|   0.0000115   385-426   VWC domain  
  0.0000282   5510-5592   VWC domain  
  0.00262   855-894   VWC domain  
gi|308818204|ref|NP_001184224.1|   0.000000000000136   101-158   VWC domain  
gi|308818206|ref|NP_001184225.1|   0.000000000000126   101-158   VWC domain  
gi|310110100|ref|XP_003119529.1|   0.00000356   402-454   Fibronectin type I module  
  0.00753   878-918   VWC domain  
  0.023   768-820   Fibronectin type I module  
gi|310110158|ref|XP_001717583.3|   0.00000126   467-514   VWC domain  
  0.000068   946-986   VWC domain  
gi|310120635|ref|XP_291816.8|   0.00000126   467-514   VWC domain  
  0.000068   946-986   VWC domain  
gi|31542331|ref|NP_001545.2|   0.00000534   98-163   Fibronectin type I module  
gi|34147715|ref|NP_660277.2|   0.00000000000387   113-180   VWC domain  
  0.00000000000471   257-324   VWC domain  
  0.00000000023   35-101   VWC domain  
gi|341913724|ref|XP_003403685.1|   0.0000314   796-879   VWC domain  
  0.0000523   888-947   VWC domain  
gi|341913794|ref|XP_003119581.2|   0.0000889   431-505   Fibronectin type I module  
gi|341915544|ref|XP_003403498.1|   0.0000722   1678-1761   VWC domain  
  0.000105   1770-1829   VWC domain  
  0.000586   606-658   Fibronectin type I module  
gi|341915615|ref|XP_003403574.1|   0.0000889   431-505   Fibronectin type I module  
gi|37693519|ref|NP_597725.1|   0.0000000000000126   157-226   VWC domain  
  0.00000000199   284-359   VWC domain  
  0.00000241   99-166   VWC domain  
  0.00000889   62-106   VWC domain  
  0.000046   236-289   VWC domain  
gi|38202241|ref|NP_937882.1|   0.000068   132-173   VWC domain  
gi|40317626|ref|NP_003237.2|   0.000000000000387   317-374   VWC domain  
gi|40317628|ref|NP_003238.2|   0.0000000000000931   318-376   VWC domain  
gi|40353769|ref|NP_056239.3|   5.44e-16   250-316   VWC domain  
  0.00000000000293   32-97   VWC domain  
  0.0000000000123   109-176   VWC domain  
gi|4502951|ref|NP_000081.1|   0.00000000000167   30-90   VWC domain  
gi|4503123|ref|NP_001892.1|   0.0000000331   95-166   Fibronectin type I module  
gi|4505423|ref|NP_002505.1|   0.000000324   102-173   Fibronectin type I module  
gi|4505861|ref|NP_000921.1|   2.82e-20   36-85   Fibronectin type I module  
gi|4507921|ref|NP_003873.1|   0.00000000167   115-185   VWC domain  
gi|4507925|ref|NP_003871.1|   0.0000722   114-155   VWC domain  
gi|4557543|ref|NP_001384.1|   0.000000000000091   101-159   VWC domain  
gi|4557679|ref|NP_000205.1|   0.0000785   855-911   VWC domain  
gi|47132547|ref|NP_473375.2|   0.0000000000000017   557-603   Fibronectin type I module  
  0.00000000000000654   515-559   Fibronectin type I module  
  0.0000000000000249   230-274   Fibronectin type I module  
  0.0000000000000353   467-508   Fibronectin type I module  
  0.0000000000000536   93-138   Fibronectin type I module  
  0.000000000000131   184-227   Fibronectin type I module  
  0.00000000000051   49-90   Fibronectin type I module  
  0.000000000000733   141-181   Fibronectin type I module  
  0.0000000000249   306-344   Fibronectin type I module  
gi|47132549|ref|NP_997639.1|   0.00000000000000746   557-603   Fibronectin type I module  
  0.0000000000000157   2039-2082   Fibronectin type I module  
  0.0000000000000275   515-559   Fibronectin type I module  
  0.000000000000102   230-274   Fibronectin type I module  
  0.000000000000144   467-508   Fibronectin type I module  
  0.000000000000222   93-138   Fibronectin type I module  
  0.000000000000454   1994-2037   Fibronectin type I module  
  0.00000000000055   184-227   Fibronectin type I module  
  0.00000000000209   49-90   Fibronectin type I module  
  0.00000000000301   141-181   Fibronectin type I module  
  0.0000000000131   2082-2123   Fibronectin type I module  
  0.000000000105   306-344   Fibronectin type I module  
gi|47132553|ref|NP_997641.1|   0.00000000000000785   557-603   Fibronectin type I module  
  0.000000000000017   2159-2202   Fibronectin type I module  
  0.0000000000000288   515-559   Fibronectin type I module  
  0.000000000000109   230-274   Fibronectin type I module  
  0.000000000000157   467-508   Fibronectin type I module  
  0.000000000000236   93-138   Fibronectin type I module  
  0.000000000000471   2114-2157   Fibronectin type I module  
  0.000000000000576   184-227   Fibronectin type I module  
  0.00000000000222   49-90   Fibronectin type I module  
  0.00000000000327   141-181   Fibronectin type I module  
  0.0000000000144   2202-2243   Fibronectin type I module  
  0.000000000111   306-344   Fibronectin type I module  
gi|47132555|ref|NP_997643.1|   0.00000000000000798   557-603   Fibronectin type I module  
  0.000000000000017   2193-2236   Fibronectin type I module  
  0.0000000000000301   515-559   Fibronectin type I module  
  0.00000000000011   230-274   Fibronectin type I module  
  0.000000000000157   467-508   Fibronectin type I module  
  0.000000000000249   93-138   Fibronectin type I module  
  0.000000000000488   2148-2191   Fibronectin type I module  
  0.000000000000589   184-227   Fibronectin type I module  
  0.00000000000236   49-90   Fibronectin type I module  
  0.00000000000327   141-181   Fibronectin type I module  
  0.0000000000144   2236-2277   Fibronectin type I module  
  0.000000000113   306-344   Fibronectin type I module  
gi|47132557|ref|NP_997647.1|   0.00000000000000864   557-603   Fibronectin type I module  
  0.0000000000000183   2340-2383   Fibronectin type I module  
  0.0000000000000327   515-559   Fibronectin type I module  
  0.000000000000118   230-274   Fibronectin type I module  
  0.00000000000017   467-508   Fibronectin type I module  
  0.000000000000262   93-138   Fibronectin type I module  
  0.000000000000523   2295-2338   Fibronectin type I module  
  0.000000000000628   184-227   Fibronectin type I module  
  0.00000000000249   49-90   Fibronectin type I module  
  0.00000000000353   141-181   Fibronectin type I module  
  0.0000000000157   2383-2424   Fibronectin type I module  
  0.00000000012   306-344   Fibronectin type I module  
gi|5453766|ref|NP_006150.1|   0.00000000105   268-332   VWC domain  
  0.00000000586   688-760   VWC domain  
  0.000178   324-398   VWC domain  
gi|5901956|ref|NP_009016.1|   0.0000262   228-269   VWC domain  
gi|89191868|ref|NP_000543.2|   0.0000387   2570-2650   VWC domain  
  0.000178   827-893   VWC domain  
  0.000722   2423-2499   VWC domain  
  0.00638   699-740   VWC domain  
gi|89363017|ref|NP_000384.2|   0.00000000000000314   39-98   VWC domain  
 
Weak hits:
gi|112984108|ref|NP_001037729.1|   0.00126   41-91   Fibronectin type I module  
gi|11545918|ref|NP_071447.1|   0.00931   83-142   Fibronectin type I module  
gi|134268640|ref|NP_005413.2|   0.00701   254-307   Fibronectin type I module  
gi|145275213|ref|NP_000496.2|   0.0349   132-167   Fibronectin type I module  
gi|151301154|ref|NP_005952.2|   0.000555   819-868   Fibronectin type I module  
  0.00188   350-398   VWC domain  
gi|224586907|ref|NP_055279.3|   0.000178   93-156   VWC domain  
gi|259013547|ref|NP_001158507.1|   0.00356   130-174   VWC domain  
gi|291084735|ref|NP_001167004.1|   0.000847   224-289   VWC domain  
gi|291084739|ref|NP_001167005.1|   0.000827   221-286   VWC domain  
gi|294774585|ref|NP_775862.3|   0.0046   434-475   Fibronectin type I module  
gi|296278246|ref|NP_001171710.1|   0.000983   262-327   VWC domain  
gi|324713036|ref|NP_001191344.1|   0.00282   2-37   Fibronectin type I module  
gi|341913790|ref|XP_003403692.1|   0.0091   795-836   Fibronectin type I module  
gi|341915599|ref|XP_003403572.1|   0.00209   1257-1317   Fibronectin type I module  
  0.0146   817-858   Fibronectin type I module  
  0.0534   1175-1208   VWC domain  
gi|4504383|ref|NP_001519.1|   0.00837   199-238   Fibronectin type I module  
gi|4557036|ref|NP_002434.1|   0.00429   36-89   Fibronectin type I module  
gi|4826694|ref|NP_005128.1|   0.000983   265-330   VWC domain  
gi|51873053|ref|NP_001004019.1|   0.00356   130-174   VWC domain  
gi|51873055|ref|NP_001989.2|   0.00335   130-174   VWC domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   105027 105027
No Yes Homo sapiens 76_38 Human 383 107
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 68 29
No Yes Gorilla gorilla 76_3.1 Western gorilla 125 45
No Yes Pongo abelii 76_2 Sumatran orangutan 89 33
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 91 32
No Yes Papio anubis 76 Olive baboon 98 30
No Yes Macaca mulatta 76_1 Rhesus monkey 238 57
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 257 100
No Yes Otolemur garnettii 76_3 Small-eared galago 79 28
No Yes Microcebus murinus 76_1 Gray mouse lemur 66 27
No Yes Rattus norvegicus 76_5.0 Norway rat 125 42
No Yes Mus musculus 76_38 House mouse 258 68
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 67 29
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 87 32
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 73 31
No Yes Cavia porcellus 76_3 Domestic guinea pig 96 37
No Yes Oryctolagus cuniculus 76_2 Rabbit 106 38
No Yes Ochotona princeps 76 American pika 63 25
No Yes Tupaia belangeri 76 Northern tree shrew 42 23
No Yes Sus scrofa 76_10.2 Pig 144 43
No Yes Bos taurus 76_3.1 Cattle 154 37
No Yes Ovis aries 76_3.1 Sheep 113 39
No Yes Vicugna pacos 76_1 Alpaca 44 21
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 78 28
No Yes Mustela putorius furo 76_1.0 Domestic ferret 96 35
No Yes Ailuropoda melanoleuca 76_1 Giant panda 110 42
No Yes Canis familiaris 76_3.1 Dog 144 52
No Yes Felis catus 76_6.2 Domestic cat 101 37
No Yes Equus caballus 76_2 Horse 146 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 109 33
No Yes Pteropus vampyrus 76_1 Large flying fox 80 32
No Yes Sorex araneus 76_1 European shrew 36 20
No Yes Erinaceus europaeus 76 Western European hedgehog 39 18
No Yes Procavia capensis 76_1 Cape rock hyrax 60 31
No Yes Loxodonta africana 76_3 African savanna elephant 110 42
No Yes Echinops telfairi 76 Small Madagascar hedgehog 60 29
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 91 39
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 39 17
No Yes Macropus eugenii 76_1.0 Tammar wallaby 40 21
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 95 44
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 82 35
No Yes Ornithorhynchus anatinus 76_5 Platypus 85 41
No Yes Saccoglossus kowalevskii v3.0   266 96
No Yes Petromyzon marinus 76_7.0 Sea lamprey 47 24
No Yes Meleagris gallopavo 76_2 Turkey 65 39
No Yes Gallus gallus 76_4 Chicken 82 30
No Yes Anas platyrhynchos 76_1.0 Mallard 65 31
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 68 34
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 76 37
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 70 35
No Yes Anolis carolinensis 76_2.0 Green anole 96 36
No Yes Xenopus laevis African clawed frog 225 64
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 162 50
No Yes Latimeria chalumnae 76_1 Coelacanth 114 49
No Yes Lepisosteus oculatus 76 Spotted gar 174 58
No Yes Gadus morhua 76_1 Atlantic cod 84 39
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 190 59
No Yes Takifugu rubripes 76_4 Torafugu 363 145
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 104 55
No Yes Oryzias latipes 76_1 Japanese medaka 110 48
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 106 39
No Yes Poecilia formosa 76 Amazon molly 113 45
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 161 55
No Yes Astyanax mexicanus 76 Mexican tetra 105 46
No Yes Danio rerio 76_9 Zebrafish 195 80
No Yes Oikopleura dioica   11 8
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 117 45
No Yes Ciona intestinalis 76 Vase tunicate 60 24
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 124 36
No Yes Adineta vaga   24 5
No Yes Octopus bimaculoides 280   555 83
No Yes Crassostrea gigas 22 Pacific oyster 121 40
No Yes Lottia gigantea Owl limpet 84 33
No Yes Helobdella robusta   7 5
No Yes Capitella sp. I   29 15
No Yes Danaus plexippus OGS1.0 Monarch butterfly 23 9
No Yes Heliconius melpomene Postman butterfly 20 7
No Yes Bombyx mori Domestic silkworm 16 10
No Yes Nasonia vitripennis Jewel wasp 27 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 42 13
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 21 8
No Yes Linepithema humile v1.1 Argentine ant 21 8
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 19 9
No Yes Solenopsis invicta v.2.2.3 Red fire ant 19 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 24 8
No Yes Atta cephalotes v1.1   22 10
No Yes Camponotus floridanus v3.3 Florida carpenter ant 24 8
No Yes Lucilia cuprina Australian sheep blowfly 23 9
No Yes Drosophila grimshawi 1.3   26 13
No Yes Drosophila willistoni 1.3   27 13
No Yes Drosophila pseudoobscura 2.13   23 13
No Yes Drosophila persimilis 1.3   25 11
No Yes Drosophila suzukii   23 9
No Yes Drosophila yakuba 1.3   25 13
No Yes Drosophila simulans 1.3   20 11
No Yes Drosophila sechellia 1.3   25 13
No Yes Drosophila melanogaster 76_5 Fruit fly 51 24
No Yes Drosophila erecta 1.3   27 13
No Yes Drosophila ananassae 1.3   27 14
No Yes Drosophila virilis 1.2   26 12
No Yes Drosophila mojavensis 1.3   28 14
No Yes Megaselia scalaris 22   7 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 23 12
No Yes Culex pipiens quinquefasciatus Southern house mosquito 29 15
No Yes Anopheles darlingi 22 American malaria mosquito 17 12
No Yes Anopheles gambiae 49_3j African malaria mosquito 24 11
No Yes Tribolium castaneum 3.0 Red flour beetle 29 12
No Yes Pediculus humanus corporis (Early assembly) Human body louse 25 11
No Yes Acyrthosiphon pisum Pea aphid 18 6
No Yes Rhodnius prolixus 22   29 10
No Yes Daphnia pulex Common water flea 30 18
No Yes Strigamia maritima 22   34 17
No Yes Sarcoptes scabiei   13 5
No Yes Tetranychus urticae Two-spotted spider mite 31 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 25 9
No Yes Pristionchus pacificus   9 4
No Yes Meloidogyne incognita Southern root-knot nematode 5 3
No Yes Meloidogyne hapla   7 2
No Yes Onchocerca volvulus 22   7 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 2
No Yes Caenorhabditis japonica   7 2
No Yes Caenorhabditis brenneri   6 2
No Yes Caenorhabditis remanei   7 3
No Yes Caenorhabditis elegans 76_235 Roundworm 31 8
No Yes Caenorhabditis briggsae 2   6 2
No Yes Trichinella spiralis 22   10 5
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 39 21
No Yes Acropora digitifera v1.0   23 15
No Yes Nematostella vectensis 1.0 Starlet sea anemone 18 12
No Yes Hydra vulgaris   10 6
No Yes Amphimedon queenslandica   7 4
No Yes Trichoplax adhaerens   30 4
No Yes Sorangium cellulosum 'So ce 56'   2 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 153 60
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 28 19
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 25 12
No Yes Ascaris suum Victoria/Ghent Pig roundworm 10 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 24 6
No Yes Sorangium cellulosum So0157-2   4 1
No Yes Homo sapiens 75_37 (old version GRC) Human 363 114
No Yes Homo sapiens (NCBI version) Human 201 59
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 95 33
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 8 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 1
No Yes Homo sapiens 69_37 Human 84 35
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 68 29
No Yes Gorilla gorilla 69_3.1 Western gorilla 102 38
No Yes Pongo abelii 69_2 Sumatran orangutan 73 30
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 79 31
No Yes Macaca mulatta 69_1 Rhesus monkey 73 26
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 91 36
No Yes Otolemur garnettii 69_3 Small-eared galago 79 28
No Yes Microcebus murinus 69_1 Gray mouse lemur 66 27
No Yes Rattus norvegicus 69_3.4 Norway rat 90 34
No Yes Mus musculus 69_38 House mouse 94 33
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 67 29
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 81 30
No Yes Cavia porcellus 69_3 Domestic guinea pig 96 37
No Yes Oryctolagus cuniculus 69_2 Rabbit 91 34
No Yes Ochotona princeps 69 American pika 63 25
No Yes Tupaia belangeri 69 Northern tree shrew 42 23
No Yes Sus scrofa 69_10.2 Pig 84 29
No Yes Bos taurus 69_3.1 Cattle 92 32
No Yes Vicugna pacos 69_1 Alpaca 44 21
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 78 28
No Yes Mustela putorius furo 69_1.0 Domestic ferret 96 35
No Yes Ailuropoda melanoleuca 69_1 Giant panda 94 37
No Yes Canis familiaris 69_3.1 Dog 101 38
No Yes Felis catus 69 Domestic cat 48 24
No Yes Equus caballus 69_2 Horse 93 33
No Yes Myotis lucifugus 69_2.0 Little brown bat 71 28
No Yes Pteropus vampyrus 69_1 Large flying fox 80 32
No Yes Sorex araneus 69_1 European shrew 36 20
No Yes Erinaceus europaeus 69 Western European hedgehog 39 18
No Yes Procavia capensis 69_1 Cape rock hyrax 60 31
No Yes Loxodonta africana 69_3 African savanna elephant 87 31
No Yes Echinops telfairi 69 Small Madagascar hedgehog 60 29
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 47 26
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 39 17
No Yes Macropus eugenii 69_1.0 Tammar wallaby 40 21
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 85 36
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 80 33
No Yes Ornithorhynchus anatinus 69_5 Platypus 75 39
No Yes Petromyzon marinus 69_7.0 Sea lamprey 42 19
No Yes Meleagris gallopavo 69_2 Turkey 58 32
No Yes Gallus gallus 69_2 Chicken 62 30
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 66 32
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 65 32
No Yes Anolis carolinensis 69_2.0 Green anole 92 36
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 102 39
No Yes Latimeria chalumnae 69_1 Coelacanth 101 42
No Yes Gadus morhua 69_1 Atlantic cod 80 35
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 95 34
No Yes Takifugu rubripes 69_4 Torafugu 97 36
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 87 40
No Yes Oryzias latipes 69_1 Japanese medaka 91 35
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 106 39
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 105 41
No Yes Danio rerio 69_9 Zebrafish 120 51
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 52 18
No Yes Ciona intestinalis 69 Vase tunicate 49 21
No Yes Drosophila melanogaster 69_5 Fruit fly 26 12
No Yes Caenorhabditis elegans 69_215 Roundworm 7 2
No Yes NCBI 2017_08 genome   52215 16311
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 2
No Yes STRING v9.0.5 (STRING)   2925 1172
No Yes Uniprot 2018_03 genome   27002 10540
No Yes Global Ocean Sampling Expedition (GOS)   4 3
No Yes PDB chains (SCOP 1.75) (PDB)   13 9
No Yes Protein Data Bank (all PDB sequenc)   83 50
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   179 179
No Yes TargetDB (Targets)   39 21
No Yes UniProt viral sequences (Viral)   19 19

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