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  Home > Genomes > Oreochromis niloticus 69_1.0 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Oreochromis niloticus 69_1.0

Assignment details

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Oreochromis niloticus 69_1.0 has 522 significant domains in 475 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSONIP00000000102   7.49e-17   19-85   RING finger domain, C3HC4  
ENSONIP00000000125   4.71e-19   144-213   ZZ domain  
ENSONIP00000000132   2.99e-19   262-316   RING finger domain, C3HC4  
ENSONIP00000000144   0.0000000000000906   24-129   Zf-UBP  
ENSONIP00000000209   0.00000000000000565   30-112   RING finger domain, C3HC4  
  0.00000000000247   188-230   RING finger domain, C3HC4  
  0.00000141   104-169   IBR domain  
ENSONIP00000000320   0.00000000000353   20-87   RING finger domain, C3HC4  
ENSONIP00000000355   0.00000000000177   218-286   RING finger domain, C3HC4  
ENSONIP00000000395   2.87e-19   14-83   RING finger domain, C3HC4  
ENSONIP00000000400   9.3e-20   7-75   RING finger domain, C3HC4  
ENSONIP00000000402   3.09e-17   10-79   RING finger domain, C3HC4  
ENSONIP00000000520   0.000000221   524-573   RING finger domain, C3HC4  
ENSONIP00000000527   1.14e-19   10-79   RING finger domain, C3HC4  
ENSONIP00000000558   2.58e-18   13-75   RING finger domain, C3HC4  
ENSONIP00000000569   3.33e-20   515-581   RING finger domain, C3HC4  
ENSONIP00000000577   2.08e-21   30-100   RING finger domain, C3HC4  
ENSONIP00000000698   0.00000000118   2-42   RING finger domain, C3HC4  
ENSONIP00000000777   0.00000000783   65-110   RING finger domain, C3HC4  
  0.00117   131-183   RING finger domain, C3HC4  
ENSONIP00000000851   0.000000000000188   141-200   RING finger domain, C3HC4  
  0.00000000795   77-138   IBR domain  
  0.000000129   2-76   RING finger domain, C3HC4  
ENSONIP00000000864   0.00000000267   1404-1456   RING finger domain, C3HC4  
ENSONIP00000000933   0.0000000000000118   717-769   RING finger domain, C3HC4  
ENSONIP00000000935   0.0000000000462   249-301   RING finger domain, C3HC4  
ENSONIP00000000965   0.0000959   855-885   RING finger domain, C3HC4  
ENSONIP00000001026   0.00000864   26-107   RING finger domain, C3HC4  
ENSONIP00000001062   7.42e-22   1058-1150   Zf-UBP  
ENSONIP00000001317   0.0000000707   293-339   RING finger domain, C3HC4  
ENSONIP00000001319   8.12e-20   219-300   ZZ domain  
ENSONIP00000001336   0.000000477   335-394   U-box  
ENSONIP00000001406   0.00000565   230-286   IBR domain  
ENSONIP00000001738   0.00000000000000884   37-105   RING finger domain, C3HC4  
ENSONIP00000001798   0.000000000000816   275-325   RING finger domain, C3HC4  
ENSONIP00000001833   3.31e-21   10-82   RING finger domain, C3HC4  
ENSONIP00000001836   1.81e-19   2-72   RING finger domain, C3HC4  
ENSONIP00000001870   6.63e-21   10-82   RING finger domain, C3HC4  
ENSONIP00000001898   0.00000002   8-53   ZZ domain  
ENSONIP00000001917   0.000000000000189   22-72   RING finger domain, C3HC4  
ENSONIP00000002075   0.000000299   275-317   RING finger domain, C3HC4  
ENSONIP00000002088   5.89e-18   34-108   RING finger domain, C3HC4  
ENSONIP00000002121   5.42e-33   173-281   Zf-UBP  
ENSONIP00000002122   3.28e-16   141-227   RING finger domain, C3HC4  
  0.00000000000000188   295-353   RING finger domain, C3HC4  
  0.00000000233   214-283   IBR domain  
ENSONIP00000002177   0.00000971   31-110   RING finger domain, C3HC4  
ENSONIP00000002197   0.000000000306   473-531   RING finger domain, C3HC4  
ENSONIP00000002244   1.96e-19   496-601   RING finger domain, C3HC4  
ENSONIP00000002384   0.00000000000000259   8-83   RING finger domain, C3HC4  
ENSONIP00000002444   8.48e-21   38-112   RING finger domain, C3HC4  
ENSONIP00000002481   1.53e-18   2-73   RING finger domain, C3HC4  
ENSONIP00000002512   1.68e-18   10-81   RING finger domain, C3HC4  
ENSONIP00000002513   2.12e-19   99-145   RING finger domain, C3HC4  
ENSONIP00000002845   0.0000000305   433-480   RING finger domain, C3HC4  
ENSONIP00000002890   0.000000168   73-148   RING finger domain, C3HC4  
ENSONIP00000002908   8.52e-20   4-90   RING finger domain, C3HC4  
ENSONIP00000002954   1.59e-23   1296-1377   U-box  
ENSONIP00000003025   2.87e-24   207-274   RING finger domain, C3HC4  
ENSONIP00000003042   1.14e-18   17-88   RING finger domain, C3HC4  
ENSONIP00000003080   4.86e-21   321-384   RING finger domain, C3HC4  
ENSONIP00000003115   3.76e-21   337-426   RING finger domain, C3HC4  
  0.00000000000000194   519-568   RING finger domain, C3HC4  
  0.00000749   413-493   RING finger domain, C3HC4  
ENSONIP00000003180   0.00000000000000141   66-121   Variant RING domain  
ENSONIP00000003230   1.14e-20   221-287   RING finger domain, C3HC4  
ENSONIP00000003315   0.00000468   382-432   RING finger domain, C3HC4  
ENSONIP00000003326   2.71e-17   506-593   ZZ domain  
ENSONIP00000003374   0.00000000000000162   131-213   RING finger domain, C3HC4  
  0.000000000000803   300-355   RING finger domain, C3HC4  
  0.00000000000537   204-273   IBR domain  
ENSONIP00000003377   0.0000000000000471   17-70   RING finger domain, C3HC4  
ENSONIP00000003534   0.00000000000000123   34-110   RING finger domain, C3HC4  
ENSONIP00000003601   0.000000000448   22-72   RING finger domain, C3HC4  
ENSONIP00000003630   0.000000000707   297-366   RING finger domain, C3HC4  
ENSONIP00000003717   0.0000000411   85-116   RING finger domain, C3HC4  
ENSONIP00000003785   8.94e-16   34-115   RING finger domain, C3HC4  
ENSONIP00000003866   0.000000000000236   10-69   RING finger domain, C3HC4  
ENSONIP00000004063   0.0000000000121   16-67   RING finger domain, C3HC4  
ENSONIP00000004105   2.65e-22   395-473   U-box  
ENSONIP00000004116   0.000000000000004   621-686   Variant RING domain  
ENSONIP00000004181   1.06e-20   241-330   RING finger domain, C3HC4  
ENSONIP00000004191   5.3e-33   1-83   RING finger domain, C3HC4  
ENSONIP00000004196   8.39e-18   14-83   RING finger domain, C3HC4  
ENSONIP00000004201   9.28e-18   14-83   RING finger domain, C3HC4  
ENSONIP00000004204   5.89e-19   8-77   RING finger domain, C3HC4  
ENSONIP00000004270   0.00000000795   524-572   RING finger domain, C3HC4  
ENSONIP00000004297   0.0000000742   215-266   ZZ domain  
ENSONIP00000004302   0.00000000000000221   60-117   Variant RING domain  
ENSONIP00000004416   6.31e-20   425-491   RING finger domain, C3HC4  
ENSONIP00000004423   1.88e-20   3-76   RING finger domain, C3HC4  
ENSONIP00000004554   9.72e-20   20-89   RING finger domain, C3HC4  
ENSONIP00000004606   2.21e-16   23-107   RING finger domain, C3HC4  
  0.000000000000153   184-230   RING finger domain, C3HC4  
  0.0000000335   99-166   IBR domain  
ENSONIP00000004750   1.41e-17   78-138   RING finger domain, C3HC4  
ENSONIP00000004763   3.3e-22   218-306   ZZ domain  
ENSONIP00000004863   0.0000000000000013   41-105   RING finger domain, C3HC4  
ENSONIP00000004972   0.00000000114   8-58   RING finger domain, C3HC4  
ENSONIP00000005133   1.86e-18   2-72   RING finger domain, C3HC4  
ENSONIP00000005289   2.42e-38   10-99   RING finger domain, C3HC4  
ENSONIP00000005347   2.99e-19   227-287   RING finger domain, C3HC4  
ENSONIP00000005356   0.0000000000000751   14-78   RING finger domain, C3HC4  
ENSONIP00000005360   0.0000000000000581   221-292   RING finger domain, C3HC4  
ENSONIP00000005515   1.66e-21   10-83   RING finger domain, C3HC4  
ENSONIP00000005553   3.95e-20   13-82   RING finger domain, C3HC4  
ENSONIP00000005559   4.64e-21   13-82   RING finger domain, C3HC4  
ENSONIP00000005677   0.0000155   22-73   RING finger domain, C3HC4  
ENSONIP00000005853   1.83e-21   57-127   RING finger domain, C3HC4  
ENSONIP00000005859   0.000000000000221   19-87   RING finger domain, C3HC4  
ENSONIP00000006004   0.000000106   812-853   RING finger domain, C3HC4  
ENSONIP00000006031   0.0000000109   1716-1767   RING finger domain, C3HC4  
ENSONIP00000006038   0.00000583   103-162   RING finger domain, C3HC4  
ENSONIP00000006044   5.96e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000006078   0.000000000186   4-70   RING finger domain, C3HC4  
ENSONIP00000006108   0.0000813   5-34   RING finger domain, C3HC4  
ENSONIP00000006128   0.00000000000275   957-1001   RING finger domain, C3HC4  
ENSONIP00000006137   0.000000000000221   3-55   U-box  
ENSONIP00000006309   0.0000000000000489   126-207   RING finger domain, C3HC4  
  0.000000000000589   292-346   RING finger domain, C3HC4  
  0.0000000000111   198-266   RING finger domain, C3HC4  
ENSONIP00000006354   1.46e-19   7-81   RING finger domain, C3HC4  
ENSONIP00000006487   6.8e-20   401-467   RING finger domain, C3HC4  
ENSONIP00000006509   0.000000000002   1619-1666   ZZ domain  
ENSONIP00000006550   0.00000000000000212   2-88   RING finger domain, C3HC4  
  0.0113   169-216   RING finger domain, C3HC4  
ENSONIP00000006585   3.53e-19   318-387   RING finger domain, C3HC4  
  1.14e-18   2-69   RING finger domain, C3HC4  
ENSONIP00000006616   0.00000000000000212   5-109   Zf-UBP  
ENSONIP00000006627   0.0000000000000457   4013-4065   RING finger domain, C3HC4  
ENSONIP00000006866   0.000000706   132-208   RING finger domain, C3HC4  
ENSONIP00000006977   2.83e-20   224-306   ZZ domain  
ENSONIP00000007028   0.0000000000000306   22-97   RING finger domain, C3HC4  
ENSONIP00000007098   1.09e-21   22-139   Zf-UBP  
ENSONIP00000007154   4.62e-34   28-110   RING finger domain, C3HC4  
ENSONIP00000007363   1.37e-19   948-1001   RING finger domain, C3HC4  
ENSONIP00000007399   6.03e-18   71-142   RING finger domain, C3HC4  
ENSONIP00000007488   0.0000000000000162   101-167   RING finger domain, C3HC4  
  0.000000000000742   284-350   RING finger domain, C3HC4  
ENSONIP00000007489   0.0000000000000162   99-165   RING finger domain, C3HC4  
  0.000000000000636   282-348   RING finger domain, C3HC4  
ENSONIP00000007490   1.04e-16   369-430   RING finger domain, C3HC4  
ENSONIP00000007801   0.0000000449   292-357   RING finger domain, C3HC4  
ENSONIP00000007826   2.87e-41   340-420   RING finger domain, C3HC4  
ENSONIP00000007880   2.38e-28   985-1069   U-box  
ENSONIP00000007962   0.00000000259   24-69   RING finger domain, C3HC4  
ENSONIP00000008001   0.000000724   644-716   RING finger domain, C3HC4  
ENSONIP00000008017   0.00000000000275   297-348   RING finger domain, C3HC4  
ENSONIP00000008025   1.15e-22   248-313   RING finger domain, C3HC4  
ENSONIP00000008228   1.84e-23   116-194   ZZ domain  
  0.00000198   952-998   RING finger domain, C3HC4  
  0.023   876-918   RING finger domain, C3HC4  
ENSONIP00000008284   0.0000000000278   129-198   RING finger domain, C3HC4  
ENSONIP00000008359   0.0000000000000406   763-831   IBR domain  
  0.0000000706   680-741   RING finger domain, C3HC4  
  0.0000154   847-894   RING finger domain, C3HC4  
ENSONIP00000008393   0.00000424   36-88   RING finger domain, C3HC4  
ENSONIP00000008496   1.31e-20   10-80   RING finger domain, C3HC4  
ENSONIP00000008499   0.0000000336   4402-4477   RING finger domain, C3HC4  
ENSONIP00000008556   8.11e-19   10-72   RING finger domain, C3HC4  
ENSONIP00000008586   0.00000000000464   286-362   RING finger domain, C3HC4  
  0.00000000198   355-421   IBR domain  
  0.0000000765   439-488   RING finger domain, C3HC4  
ENSONIP00000008667   9.42e-16   123-203   RING finger domain, C3HC4  
  0.00000000000061   290-345   RING finger domain, C3HC4  
  0.00000000000291   194-262   IBR domain  
ENSONIP00000008856   2.55e-20   10-85   RING finger domain, C3HC4  
ENSONIP00000008954   0.000000000306   2043-2132   RING finger domain, C3HC4  
  0.000318   2204-2236   RING finger domain, C3HC4  
  0.00883   2120-2188   IBR domain  
ENSONIP00000009000   0.0000000000000547   392-440   RING finger domain, C3HC4  
  0.000124   314-361   RING finger domain, C3HC4  
ENSONIP00000009055   4.16e-21   329-415   RING finger domain, C3HC4  
  6.06e-16   512-561   RING finger domain, C3HC4  
  0.0000243   404-486   IBR domain  
ENSONIP00000009086   0.000000000188   159-245   RING finger domain, C3HC4  
ENSONIP00000009109   3.31e-17   537-601   RING finger domain, C3HC4  
ENSONIP00000009247   5.96e-19   9-79   RING finger domain, C3HC4  
ENSONIP00000009299   0.0000022   38-100   RING finger domain, C3HC4  
ENSONIP00000009342   4.37e-17   33-100   RING finger domain, C3HC4  
ENSONIP00000009350   2.7e-21   14-83   RING finger domain, C3HC4  
ENSONIP00000009351   1.7e-19   11-81   RING finger domain, C3HC4  
ENSONIP00000009405   0.000000000000663   54-105   RING finger domain, C3HC4  
ENSONIP00000009464   0.00000000000115   97-144   RING finger domain, C3HC4  
ENSONIP00000009468   1.35e-21   9-81   RING finger domain, C3HC4  
ENSONIP00000009494   7.54e-21   281-340   RING finger domain, C3HC4  
ENSONIP00000009542   4.59e-17   3-62   ZZ domain  
ENSONIP00000009664   3.89e-22   308-386   Variant RING domain  
ENSONIP00000009825   0.00000000867   82-142   RING finger domain, C3HC4  
ENSONIP00000009836   1.14e-16   11-84   RING finger domain, C3HC4  
ENSONIP00000009841   4.64e-20   9-81   RING finger domain, C3HC4  
ENSONIP00000009848   1.48e-19   8-79   RING finger domain, C3HC4  
ENSONIP00000009876   0.000000000053   14-61   RING finger domain, C3HC4  
ENSONIP00000009880   5.3e-20   10-79   RING finger domain, C3HC4  
ENSONIP00000009888   4.2e-20   7-75   RING finger domain, C3HC4  
ENSONIP00000009958   4.29e-19   11-81   RING finger domain, C3HC4  
ENSONIP00000010063   0.00000000000707   160-211   RING finger domain, C3HC4  
ENSONIP00000010079   1.9e-20   10-80   RING finger domain, C3HC4  
ENSONIP00000010172   0.00000283   82-141   RING finger domain, C3HC4  
ENSONIP00000010626   0.00000000000565   1709-1755   ZZ domain  
ENSONIP00000010635   9.89e-17   218-304   RING finger domain, C3HC4  
  0.000000000000353   394-451   RING finger domain, C3HC4  
  0.00000000000212   293-359   IBR domain  
ENSONIP00000010640   4.95e-40   19-104   RING finger domain, C3HC4  
ENSONIP00000010646   0.00000000000379   11-63   RING finger domain, C3HC4  
ENSONIP00000010665   2.43e-20   9-77   RING finger domain, C3HC4  
ENSONIP00000010700   0.00000000023   666-722   RING finger domain, C3HC4  
  0.000000336   600-658   IBR domain  
  0.0000106   515-596   RING finger domain, C3HC4  
ENSONIP00000010845   6.03e-19   518-582   RING finger domain, C3HC4  
ENSONIP00000010882   1.59e-18   1-76   RING finger domain, C3HC4  
ENSONIP00000011113   3.33e-18   1-71   RING finger domain, C3HC4  
ENSONIP00000011121   0.000000707   49-76   RING finger domain, C3HC4  
ENSONIP00000011225   0.0000000707   503-552   RING finger domain, C3HC4  
ENSONIP00000011240   2.61e-25   401-476   U-box  
ENSONIP00000011269   2.83e-19   392-497   RING finger domain, C3HC4  
ENSONIP00000011352   0.00000000000000415   7-61   Variant RING domain  
ENSONIP00000011367   0.00000000000000565   142-197   Variant RING domain  
ENSONIP00000011368   0.00000000000000565   130-185   Variant RING domain  
ENSONIP00000011391   0.000000000377   526-583   RING finger domain, C3HC4  
ENSONIP00000011461   7.73e-21   10-81   RING finger domain, C3HC4  
ENSONIP00000011543   1.06e-19   13-89   RING finger domain, C3HC4  
ENSONIP00000011616   0.0000225   164-244   RING finger domain, C3HC4  
ENSONIP00000011621   4.86e-18   12-82   RING finger domain, C3HC4  
ENSONIP00000011668   6.63e-20   8-78   RING finger domain, C3HC4  
ENSONIP00000011689   0.000000000000326   30-101   RING finger domain, C3HC4  
ENSONIP00000011694   2.83e-21   8-82   RING finger domain, C3HC4  
ENSONIP00000011757   0.00000765   238-281   RING finger domain, C3HC4  
  0.000483   144-206   RING finger domain, C3HC4  
ENSONIP00000011758   0.00000129   197-240   RING finger domain, C3HC4  
  0.00247   108-163   RING finger domain, C3HC4  
ENSONIP00000011759   0.000000671   199-241   RING finger domain, C3HC4  
  0.0000335   107-164   RING finger domain, C3HC4  
ENSONIP00000011764   6.86e-22   7-79   RING finger domain, C3HC4  
ENSONIP00000011824   2.59e-21   59-132   ZZ domain  
  0.0000000383   963-1023   RING finger domain, C3HC4  
  0.00101   806-852   RING finger domain, C3HC4  
  0.0177   855-900   RING finger domain, C3HC4  
ENSONIP00000011831   1.06e-24   212-288   U-box  
ENSONIP00000011875   0.000000000318   117-199   RING finger domain, C3HC4  
ENSONIP00000011885   9.36e-42   360-438   RING finger domain, C3HC4  
ENSONIP00000011955   2.59e-17   8-79   RING finger domain, C3HC4  
ENSONIP00000012012   6.47e-21   219-300   ZZ domain  
ENSONIP00000012038   3.26e-19   98-144   RING finger domain, C3HC4  
ENSONIP00000012430   3.95e-21   9-81   RING finger domain, C3HC4  
ENSONIP00000012525   0.000000000147   6-75   RING finger domain, C3HC4  
ENSONIP00000012541   1.02e-17   12-81   RING finger domain, C3HC4  
ENSONIP00000012661   0.00000000000002   67-123   Variant RING domain  
ENSONIP00000012669   0.000000177   294-339   RING finger domain, C3HC4  
ENSONIP00000012697   2.21e-23   433-505   Variant RING domain  
ENSONIP00000012798   0.00000000000000754   4-71   RING finger domain, C3HC4  
ENSONIP00000012803   8.84e-24   208-275   RING finger domain, C3HC4  
ENSONIP00000012838   0.00000000000000769   18-86   RING finger domain, C3HC4  
ENSONIP00000012848   0.00000000766   307-356   RING finger domain, C3HC4  
ENSONIP00000012878   0.0000122   533-584   RING finger domain, C3HC4  
ENSONIP00000013074   0.00000000353   26-74   RING finger domain, C3HC4  
ENSONIP00000013116   0.0000000000000019   63-117   Variant RING domain  
ENSONIP00000013173   1.13e-16   9-75   RING finger domain, C3HC4  
ENSONIP00000013178   4.57e-20   5-79   RING finger domain, C3HC4  
ENSONIP00000013252   0.00000000000144   25-121   RING finger domain, C3HC4  
ENSONIP00000013257   1.25e-20   268-317   RING finger domain, C3HC4  
ENSONIP00000013339   0.00000000000000862   383-441   RING finger domain, C3HC4  
ENSONIP00000013537   9.42e-19   17-86   RING finger domain, C3HC4  
ENSONIP00000013602   0.0000000000000491   206-266   RING finger domain, C3HC4  
ENSONIP00000013612   0.000000459   326-372   RING finger domain, C3HC4  
ENSONIP00000013632   0.0000000000221   170-213   RING finger domain, C3HC4  
ENSONIP00000013666   3.02e-20   413-516   RING finger domain, C3HC4  
ENSONIP00000013718   1.3e-20   12-85   RING finger domain, C3HC4  
ENSONIP00000013903   0.00000000278   27-74   RING finger domain, C3HC4  
ENSONIP00000013976   0.0000000000000243   276-346   RING finger domain, C3HC4  
ENSONIP00000014045   5.52e-21   76-142   RING finger domain, C3HC4  
ENSONIP00000014058   0.00000000000631   216-263   RING finger domain, C3HC4  
ENSONIP00000014199   2.35e-23   7-90   Zf-UBP  
ENSONIP00000014213   1.17e-26   281-382   Zf-UBP  
  0.0000000000581   264-309   RING finger domain, C3HC4  
ENSONIP00000014371   2.08e-38   335-411   RING finger domain, C3HC4  
ENSONIP00000014413   6.13e-21   13-82   RING finger domain, C3HC4  
ENSONIP00000014698   3.26e-20   263-316   RING finger domain, C3HC4  
ENSONIP00000014700   3.31e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000014719   1.1e-19   10-82   RING finger domain, C3HC4  
ENSONIP00000014724   8.95e-19   1-69   RING finger domain, C3HC4  
ENSONIP00000014758   7.07e-19   35-102   RING finger domain, C3HC4  
ENSONIP00000014813   0.00000000000000106   6-58   RING finger domain, C3HC4  
ENSONIP00000014815   5.3e-18   15-83   RING finger domain, C3HC4  
ENSONIP00000014837   0.0000000011   63-133   RING finger domain, C3HC4  
ENSONIP00000014927   1.37e-18   14-85   RING finger domain, C3HC4  
ENSONIP00000014943   0.0000000000000124   187-256   RING finger domain, C3HC4  
ENSONIP00000014956   1.39e-19   9-80   RING finger domain, C3HC4  
ENSONIP00000015035   9.62e-18   170-230   RING finger domain, C3HC4  
ENSONIP00000015066   0.00000512   8-59   RING finger domain, C3HC4  
  0.00000848   107-148   RING finger domain, C3HC4  
ENSONIP00000015076   2.87e-21   9-81   RING finger domain, C3HC4  
ENSONIP00000015089   2.02e-19   10-81   RING finger domain, C3HC4  
ENSONIP00000015224   0.00000000000000454   2-88   RING finger domain, C3HC4  
  0.000636   131-184   ZZ domain  
ENSONIP00000015537   0.0000000000000848   9-48   RING finger domain, C3HC4  
ENSONIP00000015630   0.000000000000187   114-167   Variant RING domain  
ENSONIP00000015743   2.7e-20   10-79   RING finger domain, C3HC4  
ENSONIP00000015767   6.83e-18   10-86   RING finger domain, C3HC4  
ENSONIP00000015811   0.00000000203   27-79   U-box  
  0.000000424   224-279   U-box  
ENSONIP00000015841   0.0000000000000326   696-764   RING finger domain, C3HC4  
ENSONIP00000015864   0.0000000000162   6-68   Variant RING domain  
ENSONIP00000015865   0.00000011   668-712   RING finger domain, C3HC4  
ENSONIP00000015990   3.09e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000016011   0.0000000000000663   2028-2074   RING finger domain, C3HC4  
ENSONIP00000016071   0.000000000000429   409-458   RING finger domain, C3HC4  
ENSONIP00000016364   2.24e-36   174-282   Zf-UBP  
ENSONIP00000016560   0.000000483   16-64   ZZ domain  
ENSONIP00000016562   0.00000000000000309   9-80   RING finger domain, C3HC4  
ENSONIP00000016693   0.00000000000000324   473-576   RING finger domain, C3HC4  
ENSONIP00000016762   2.59e-22   39-133   Zf-UBP  
ENSONIP00000016816   1.65e-21   3271-3359   ZZ domain  
ENSONIP00000017006   3.01e-17   45-96   RING finger domain, C3HC4  
ENSONIP00000017160   3.31e-19   10-81   RING finger domain, C3HC4  
ENSONIP00000017240   3.77e-16   77-133   RING finger domain, C3HC4  
ENSONIP00000017254   2.75e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000017258   2.43e-19   4-75   RING finger domain, C3HC4  
ENSONIP00000017313   1.72e-17   5-76   RING finger domain, C3HC4  
ENSONIP00000017314   4.37e-18   12-80   RING finger domain, C3HC4  
ENSONIP00000017315   6.63e-18   32-99   RING finger domain, C3HC4  
ENSONIP00000017317   2.91e-19   14-84   RING finger domain, C3HC4  
ENSONIP00000017361   0.000000000848   410-453   RING finger domain, C3HC4  
ENSONIP00000017440   0.000000182   309-358   RING finger domain, C3HC4  
ENSONIP00000017500   4.42e-18   29-88   RING finger domain, C3HC4  
ENSONIP00000017531   1.2e-16   43-107   RING finger domain, C3HC4  
ENSONIP00000017552   0.00000259   83-145   RING finger domain, C3HC4  
ENSONIP00000017618   1.08e-19   21-92   RING finger domain, C3HC4  
ENSONIP00000017667   0.00000000000191   2-94   RING finger domain, C3HC4  
ENSONIP00000017675   0.000000000000761   837-894   RING finger domain, C3HC4  
ENSONIP00000017679   0.00000000000000663   9-74   RING finger domain, C3HC4  
ENSONIP00000017708   2.56e-18   181-227   RING finger domain, C3HC4  
ENSONIP00000017734   0.000000000000185   38-104   U-box  
ENSONIP00000017735   0.000000000053   10-38   RING finger domain, C3HC4  
ENSONIP00000017749   0.0000000000000155   200-267   RING finger domain, C3HC4  
ENSONIP00000017753   6.03e-21   645-713   RING finger domain, C3HC4  
ENSONIP00000017768   0.000000000000146   42-98   RING finger domain, C3HC4  
ENSONIP00000017789   0.00000000000984   220-288   RING finger domain, C3HC4  
ENSONIP00000017830   0.000000000000376   17-110   RING finger domain, C3HC4  
ENSONIP00000017923   5.42e-18   72-133   ZZ domain  
ENSONIP00000018050   0.0000000000000038   6-61   Variant RING domain  
ENSONIP00000018105   0.000000000753   549-616   IBR domain  
  0.0000000177   631-694   RING finger domain, C3HC4  
  0.0000000765   475-556   RING finger domain, C3HC4  
ENSONIP00000018152   0.00000000000108   14-69   RING finger domain, C3HC4  
ENSONIP00000018232   0.00000000106   270-315   RING finger domain, C3HC4  
ENSONIP00000018332   0.00000000000016   105-157   RING finger domain, C3HC4  
ENSONIP00000018348   0.00000000052   53-98   RING finger domain, C3HC4  
ENSONIP00000018364   1.3e-22   281-363   RING finger domain, C3HC4  
ENSONIP00000018390   1.46e-16   446-492   RING finger domain, C3HC4  
  0.00000000252   106-169   RING finger domain, C3HC4  
ENSONIP00000018716   0.00000000000048   24-112   RING finger domain, C3HC4  
ENSONIP00000018903   2.91e-22   14-86   RING finger domain, C3HC4  
ENSONIP00000018928   0.00000267   465-512   RING finger domain, C3HC4  
ENSONIP00000018945   0.0000000000734   25-64,116-151   RING finger domain, C3HC4  
  0.0459   151-203   ZZ domain  
ENSONIP00000019132   0.00000000432   213-256   RING finger domain, C3HC4  
ENSONIP00000019157   3.53e-17   255-339   U-box  
  0.0000000253   464-521   RING finger domain, C3HC4  
ENSONIP00000019188   3.76e-20   292-353   RING finger domain, C3HC4  
ENSONIP00000019285   0.00000000000000294   116-197   RING finger domain, C3HC4  
  0.00000000000344   188-257   IBR domain  
  0.000000000241   286-339   RING finger domain, C3HC4  
ENSONIP00000019314   0.0000000706   2-67   Zf-UBP  
ENSONIP00000019380   1.7e-21   308-366   RING finger domain, C3HC4  
  3.04e-16   154-237   RING finger domain, C3HC4  
  0.0000000006   229-296   IBR domain  
ENSONIP00000019400   0.0000000000159   141-184   RING finger domain, C3HC4  
ENSONIP00000019408   0.00000000024   64-116   RING finger domain, C3HC4  
ENSONIP00000019423   0.00000025   46-98   RING finger domain, C3HC4  
ENSONIP00000019485   0.00000000000205   11-80   RING finger domain, C3HC4  
ENSONIP00000019499   8.94e-43   349-426   RING finger domain, C3HC4  
ENSONIP00000019506   0.0000000156   345-407   RING finger domain, C3HC4  
ENSONIP00000019511   0.00000000000066   6-72   RING finger domain, C3HC4  
ENSONIP00000019517   1.48e-16   147-195   RING finger domain, C3HC4  
ENSONIP00000019578   2.87e-19   11-79   RING finger domain, C3HC4  
ENSONIP00000019586   0.0000000000873   4-60   Variant RING domain  
ENSONIP00000019602   0.00000000000000508   9-83   RING finger domain, C3HC4  
ENSONIP00000019720   0.0000000116   27-60   RING finger domain, C3HC4  
ENSONIP00000019764   2.42e-16   142-217   RING finger domain, C3HC4  
ENSONIP00000019816   0.000000166   8-76   RING finger domain, C3HC4  
ENSONIP00000019882   4.95e-21   265-333   RING finger domain, C3HC4  
ENSONIP00000019891   1.5e-16   411-467   RING finger domain, C3HC4  
  0.00000000000259   117-189   RING finger domain, C3HC4  
ENSONIP00000019908   4.48e-18   8-78   RING finger domain, C3HC4  
ENSONIP00000020028   0.00000000017   152-201   RING finger domain, C3HC4  
ENSONIP00000020223   0.00000000000000202   2-88   RING finger domain, C3HC4  
  0.00283   114-163   ZZ domain  
ENSONIP00000020259   8.73e-21   16-88   RING finger domain, C3HC4  
ENSONIP00000020260   3.12e-18   1-70   RING finger domain, C3HC4  
ENSONIP00000020262   2.08e-18   1-70   RING finger domain, C3HC4  
ENSONIP00000020311   0.000000000000353   42-113   RING finger domain, C3HC4  
ENSONIP00000020351   0.0000000000000408   8-66   RING finger domain, C3HC4  
ENSONIP00000020556   1.26e-32   4-101   RING finger domain, C3HC4  
ENSONIP00000020562   0.00000000000224   1694-1741   ZZ domain  
ENSONIP00000020728   5.52e-21   8-80   RING finger domain, C3HC4  
ENSONIP00000020758   5.52e-20   10-80   RING finger domain, C3HC4  
ENSONIP00000020841   0.00000000000000226   101-157   Variant RING domain  
ENSONIP00000020921   0.00000216   301-346   RING finger domain, C3HC4  
ENSONIP00000020997   2.1e-17   115-186   RING finger domain, C3HC4  
ENSONIP00000020999   2.36e-20   8-78   RING finger domain, C3HC4  
ENSONIP00000021047   0.0000000045   41-106   RING finger domain, C3HC4  
ENSONIP00000021049   2.16e-20   3-89   RING finger domain, C3HC4  
ENSONIP00000021314   2.16e-21   8-80   RING finger domain, C3HC4  
ENSONIP00000021461   0.00000000379   143-199   RING finger domain, C3HC4  
ENSONIP00000021737   0.0000000000000471   22-76   RING finger domain, C3HC4  
ENSONIP00000021803   3.33e-21   9-79   RING finger domain, C3HC4  
ENSONIP00000021805   2.65e-17   8-79   RING finger domain, C3HC4  
ENSONIP00000021821   3.31e-21   9-79   RING finger domain, C3HC4  
ENSONIP00000021871   0.00000000000000278   1694-1745   RING finger domain, C3HC4  
ENSONIP00000021882   0.000000000000259   7-75   RING finger domain, C3HC4  
ENSONIP00000021935   2.5e-19   37-90   RING finger domain, C3HC4  
ENSONIP00000021968   1.34e-20   259-316   RING finger domain, C3HC4  
ENSONIP00000021975   0.00000000000000683   23-69   RING finger domain, C3HC4  
ENSONIP00000022015   6.63e-21   10-82   RING finger domain, C3HC4  
  0.000000000377   182-236   RING finger domain, C3HC4  
ENSONIP00000022045   0.0000000000000205   599-663   RING finger domain, C3HC4  
ENSONIP00000022072   0.00000000000129   1783-1844   ZZ domain  
  0.000000000494   1742-1792   ZZ domain  
ENSONIP00000022089   0.0000000000000265   4-58   RING finger domain, C3HC4  
ENSONIP00000022090   1.06e-18   6-78   RING finger domain, C3HC4  
ENSONIP00000022116   2.65e-17   359-413   RING finger domain, C3HC4  
ENSONIP00000022149   4.52e-19   60-125   RING finger domain, C3HC4  
ENSONIP00000022192   1.25e-17   328-375   RING finger domain, C3HC4  
  0.000000000000613   2-65   RING finger domain, C3HC4  
ENSONIP00000022233   0.00000000000000506   198-273   ZZ domain  
ENSONIP00000022316   7.32e-20   352-416   RING finger domain, C3HC4  
ENSONIP00000022376   0.000000286   331-386   RING finger domain, C3HC4  
ENSONIP00000022429   1.23e-20   3-73   RING finger domain, C3HC4  
ENSONIP00000022451   0.00000000835   475-522   RING finger domain, C3HC4  
ENSONIP00000022489   9.54e-27   4-99   Zf-UBP  
ENSONIP00000022540   4.29e-20   630-678   RING finger domain, C3HC4  
ENSONIP00000022560   4.48e-20   8-80   RING finger domain, C3HC4  
ENSONIP00000022611   0.0000000000000113   268-313   RING finger domain, C3HC4  
ENSONIP00000022686   0.0000339   422-473   RING finger domain, C3HC4  
ENSONIP00000022748   0.00000000000243   2037-2097   RING finger domain, C3HC4  
ENSONIP00000022782   0.00000825   17-58   RING finger domain, C3HC4  
ENSONIP00000022827   6.47e-23   418-490   Variant RING domain  
ENSONIP00000022998   0.00000033   215-262   ZZ domain  
ENSONIP00000023050   0.000000000631   32-71,133-168   RING finger domain, C3HC4  
ENSONIP00000023127   3.65e-16   797-858   ZZ domain  
ENSONIP00000023130   3.06e-22   8-92   Zf-UBP  
ENSONIP00000023134   0.0000000000000155   275-331   Variant RING domain  
ENSONIP00000023565   1.43e-20   17-86   RING finger domain, C3HC4  
ENSONIP00000023726   6.65e-20   90-141   RING finger domain, C3HC4  
ENSONIP00000023843   1.53e-25   2-95   Zf-UBP  
ENSONIP00000023858   0.0000000000000111   11-85   RING finger domain, C3HC4  
ENSONIP00000023896   1.77e-16   15-86   RING finger domain, C3HC4  
ENSONIP00000023993   3.33e-19   14-84   RING finger domain, C3HC4  
ENSONIP00000024028   2.7e-20   10-78   RING finger domain, C3HC4  
ENSONIP00000024115   0.0000000000221   15-98   RING finger domain, C3HC4  
ENSONIP00000024118   5.96e-18   25-89   RING finger domain, C3HC4  
ENSONIP00000024157   0.00000000000000184   102-157   Variant RING domain  
ENSONIP00000024589   3.53e-21   8-80   RING finger domain, C3HC4  
ENSONIP00000024696   6.45e-18   10-73   RING finger domain, C3HC4  
ENSONIP00000024730   0.00000000000000895   10-115   Zf-UBP  
ENSONIP00000024797   0.00000000000553   1647-1693   ZZ domain  
ENSONIP00000024813   9.9e-23   209-277   RING finger domain, C3HC4  
ENSONIP00000024826   0.00000000252   24-70   RING finger domain, C3HC4  
ENSONIP00000024827   0.00000000381   3-48   RING finger domain, C3HC4  
ENSONIP00000024942   2.08e-20   10-81   RING finger domain, C3HC4  
ENSONIP00000024943   0.00000000148   1-53   RING finger domain, C3HC4  
ENSONIP00000025098   0.00000000000000115   12-81   RING finger domain, C3HC4  
ENSONIP00000025124   0.000000000596   934-995   RING finger domain, C3HC4  
ENSONIP00000025158   0.0000000000418   277-329   RING finger domain, C3HC4  
ENSONIP00000025206   5.74e-25   201-280   U-box  
ENSONIP00000025341   0.00000000114   2-62   RING finger domain, C3HC4  
ENSONIP00000025530   0.00000000000000291   10-82   RING finger domain, C3HC4  
ENSONIP00000025559   0.0000000000000243   6-56   RING finger domain, C3HC4  
ENSONIP00000025729   7.73e-21   10-82   RING finger domain, C3HC4  
ENSONIP00000025736   1.88e-20   11-78   RING finger domain, C3HC4  
ENSONIP00000025764   0.00000000000073   7-72   RING finger domain, C3HC4  
ENSONIP00000025776   0.0000000141   393-447   RING finger domain, C3HC4  
ENSONIP00000025784   3.09e-18   5-78   RING finger domain, C3HC4  
ENSONIP00000025785   2.12e-18   2-81   RING finger domain, C3HC4  
ENSONIP00000025825   8.72e-19   10-75   RING finger domain, C3HC4  
ENSONIP00000025832   7.07e-20   18-89   RING finger domain, C3HC4  
ENSONIP00000025835   2.29e-20   5-77   RING finger domain, C3HC4  
ENSONIP00000025864   1.15e-21   9-80   RING finger domain, C3HC4  
ENSONIP00000025873   0.00000000000000236   25-78   RING finger domain, C3HC4  
ENSONIP00000025899   2.21e-20   12-82   RING finger domain, C3HC4  
ENSONIP00000025910   0.0000000000148   16-85   RING finger domain, C3HC4  
ENSONIP00000025916   0.00000000353   28-94   RING finger domain, C3HC4  
ENSONIP00000025949   6.19e-19   10-79   RING finger domain, C3HC4  
ENSONIP00000025958   3.09e-19   6-75   RING finger domain, C3HC4  
ENSONIP00000025961   7.36e-23   507-579   Variant RING domain  
ENSONIP00000025966   6.86e-18   10-77   RING finger domain, C3HC4  
ENSONIP00000025973   4.86e-21   10-80   RING finger domain, C3HC4  
ENSONIP00000025988   1.54e-20   15-87   RING finger domain, C3HC4  
ENSONIP00000026019   2.65e-21   10-82   RING finger domain, C3HC4  
ENSONIP00000026021   1.13e-20   10-81   RING finger domain, C3HC4  
ENSONIP00000026055   0.000000000000287   45-95   RING finger domain, C3HC4  
ENSONIP00000026070   3.98e-20   10-80   RING finger domain, C3HC4  
ENSONIP00000026071   4.64e-21   5-77   RING finger domain, C3HC4  
ENSONIP00000026082   1.19e-20   19-89   RING finger domain, C3HC4  
ENSONIP00000026106   9.94e-21   10-80   RING finger domain, C3HC4  
ENSONIP00000026211   1.14e-18   11-84   RING finger domain, C3HC4  
ENSONIP00000026212   2.08e-18   11-78   RING finger domain, C3HC4  
ENSONIP00000026213   3.09e-16   10-80   RING finger domain, C3HC4  
ENSONIP00000026218   0.00000000000259   35-81   RING finger domain, C3HC4  
ENSONIP00000026231   9.77e-21   10-79   RING finger domain, C3HC4  
ENSONIP00000026259   0.000000000383   15-84   RING finger domain, C3HC4  
ENSONIP00000026276   2.08e-21   15-87   RING finger domain, C3HC4  
ENSONIP00000026301   0.0000000000000656   12-72   RING finger domain, C3HC4  
ENSONIP00000026324   2.03e-19   10-81   RING finger domain, C3HC4  
ENSONIP00000026328   1.3e-17   9-78   RING finger domain, C3HC4  
ENSONIP00000026330   6.63e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000026354   0.00000000000353   2-73   RING finger domain, C3HC4  
ENSONIP00000026356   1.41e-19   10-82   RING finger domain, C3HC4  
ENSONIP00000026357   3.06e-20   11-82   RING finger domain, C3HC4  
ENSONIP00000026358   6.63e-20   8-79   RING finger domain, C3HC4  
ENSONIP00000026409   9.98e-20   13-85   RING finger domain, C3HC4  
ENSONIP00000026440   8.95e-21   7-82   RING finger domain, C3HC4  
ENSONIP00000026466   7.07e-19   11-79   RING finger domain, C3HC4  
ENSONIP00000026480   1.92e-16   13-79   RING finger domain, C3HC4  
ENSONIP00000026515   2.21e-19   11-82   RING finger domain, C3HC4  
ENSONIP00000026522   2.65e-18   2-72   RING finger domain, C3HC4  
ENSONIP00000026527   3.31e-17   10-78   RING finger domain, C3HC4  
ENSONIP00000026572   8.05e-21   10-79   RING finger domain, C3HC4  
ENSONIP00000026582   0.000000000000541   1-58   RING finger domain, C3HC4  
ENSONIP00000026596   1.86e-20   10-82   RING finger domain, C3HC4  
ENSONIP00000026615   2.87e-17   11-79   RING finger domain, C3HC4  
ENSONIP00000026616   2.65e-19   10-80   RING finger domain, C3HC4  
ENSONIP00000026625   1.19e-18   13-79   RING finger domain, C3HC4  
ENSONIP00000026626   1.41e-18   11-82   RING finger domain, C3HC4  
ENSONIP00000026627   4.48e-17   5-76   RING finger domain, C3HC4  
ENSONIP00000026628   1.91e-20   4-74   RING finger domain, C3HC4  
ENSONIP00000026636   7.07e-16   11-79   RING finger domain, C3HC4  
ENSONIP00000026679   5.3e-21   11-83   RING finger domain, C3HC4  
ENSONIP00000026691   0.00000000000000924   4-67   RING finger domain, C3HC4  
ENSONIP00000026720   1.04e-17   10-80   RING finger domain, C3HC4  
ENSONIP00000026743   3.53e-21   9-81   RING finger domain, C3HC4  
ENSONIP00000026757   5.74e-21   10-82   RING finger domain, C3HC4  
ENSONIP00000026758   7.73e-20   8-82   RING finger domain, C3HC4  
ENSONIP00000026759   9.98e-22   8-82   RING finger domain, C3HC4  
 
Weak hits:
ENSONIP00000000782   0.00274   626-693   RING finger domain, C3HC4  
ENSONIP00000001168   0.0138   73-108   RING finger domain, C3HC4  
ENSONIP00000001577   0.00908   302-348   RING finger domain, C3HC4  
ENSONIP00000001778   0.00105   746-806   RING finger domain, C3HC4  
ENSONIP00000002602   0.0141   605-657   RING finger domain, C3HC4  
ENSONIP00000003322   0.00824   1056-1097   RING finger domain, C3HC4  
ENSONIP00000005892   0.0547   117-160   Zf-UBP  
ENSONIP00000006042   0.000163   323-386   RING finger domain, C3HC4  
ENSONIP00000007739   0.0008   772-840   RING finger domain, C3HC4  
ENSONIP00000008361   0.0494   813-865   RING finger domain, C3HC4  
ENSONIP00000008664   0.00115   478-532   RING finger domain, C3HC4  
ENSONIP00000011026   0.000106   1276-1330   RING finger domain, C3HC4  
ENSONIP00000014473   0.00124   570-636   RING finger domain, C3HC4  
ENSONIP00000014672   0.000261   237-283   RING finger domain, C3HC4  
ENSONIP00000015011   0.000324   108-150   RING finger domain, C3HC4  
ENSONIP00000016309   0.00261   947-979   ZZ domain  
ENSONIP00000016546   0.00131   280-323   RING finger domain, C3HC4  
ENSONIP00000017508   0.0247   216-281   RING finger domain, C3HC4  
ENSONIP00000018341   0.0388   12-58   Zf-UBP  
ENSONIP00000019564   0.00331   4-48   RING finger domain, C3HC4  
ENSONIP00000019706   0.00141   10-59   RING finger domain, C3HC4  
ENSONIP00000020322   0.000648   737-808   RING finger domain, C3HC4  
ENSONIP00000020468   0.00336   156-206   RING finger domain, C3HC4  
ENSONIP00000020673   0.0233   50-103   IBR domain  
ENSONIP00000021714   0.0971   1211-1248   RING finger domain, C3HC4  
ENSONIP00000022020   0.0671   194-213   RING finger domain, C3HC4  
ENSONIP00000023311   0.000648   734-805   RING finger domain, C3HC4  
ENSONIP00000024870   0.0459   34-87   IBR domain  
ENSONIP00000025384   0.00812   1130-1187   RING finger domain, C3HC4  
ENSONIP00000025394   0.0746   368-410   RING finger domain, C3HC4  
ENSONIP00000025833   0.000318   2-47   RING finger domain, C3HC4  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.