Select to display Genome Domains Proteins No ALL 423065 423065 No Homo sapiens 76_38 Human 941 853 No Pan troglodytes 76_2.1.4 Chimpanzee 201 181 No Gorilla gorilla 76_3.1 Western gorilla 277 258 No Pongo abelii 76_2 Sumatran orangutan 207 186 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 216 197 No Papio anubis 76 Olive baboon 232 212 No Macaca mulatta 76_1 Rhesus monkey 351 315 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 431 403 No Otolemur garnettii 76_3 Small-eared galago 209 192 No Microcebus murinus 76_1 Gray mouse lemur 136 126 No Rattus norvegicus 76_5.0 Norway rat 253 228 No Mus musculus 76_38 House mouse 521 464 No Dipodomys ordii 76_1 Ord's kangaroo rat 148 136 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 187 175 No Heterocephalus glaber v1.7-2 Naked mole-rat 197 185 No Cavia porcellus 76_3 Domestic guinea pig 192 181 No Oryctolagus cuniculus 76_2 Rabbit 206 194 No Ochotona princeps 76 American pika 138 126 No Tupaia belangeri 76 Northern tree shrew 123 117 No Sus scrofa 76_10.2 Pig 226 206 No Bos taurus 76_3.1 Cattle 226 205 No Ovis aries 76_3.1 Sheep 219 198 No Vicugna pacos 76_1 Alpaca 99 94 No Tursiops truncatus 76_1 Bottlenose dolphin 177 160 No Mustela putorius furo 76_1.0 Domestic ferret 193 178 No Ailuropoda melanoleuca 76_1 Giant panda 212 199 No Canis familiaris 76_3.1 Dog 254 232 No Felis catus 76_6.2 Domestic cat 201 189 No Equus caballus 76_2 Horse 246 224 No Myotis lucifugus 76_2.0 Little brown bat 208 194 No Pteropus vampyrus 76_1 Large flying fox 177 162 No Sorex araneus 76_1 European shrew 116 113 No Erinaceus europaeus 76 Western European hedgehog 113 110 No Procavia capensis 76_1 Cape rock hyrax 140 125 No Loxodonta africana 76_3 African savanna elephant 255 237 No Echinops telfairi 76 Small Madagascar hedgehog 139 134 No Dasypus novemcinctus 76_2 Nine-banded armadillo 332 315 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 110 104 No Macropus eugenii 76_1.0 Tammar wallaby 155 142 No Sarcophilus harrisii 76_7.0 Tasmanian devil 224 203 No Monodelphis domestica 76_5 Gray short-tailed opossum 211 190 No Ornithorhynchus anatinus 76_5 Platypus 162 147 No Saccoglossus kowalevskii v3.0 377 346 No Petromyzon marinus 76_7.0 Sea lamprey 102 91 No Meleagris gallopavo 76_2 Turkey 149 140 No Gallus gallus 76_4 Chicken 161 148 No Anas platyrhynchos 76_1.0 Mallard 157 143 No Taeniopygia guttata 76_3.2.4 Zebra finch 163 147 No Ficedula albicollis 76_1.0 Collared flycatcher 161 145 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 184 168 No Anolis carolinensis 76_2.0 Green anole 184 164 No Xenopus laevis African clawed frog 405 358 No Xenopus tropicalis 76_4.2 Tropical clawed frog 219 200 No Latimeria chalumnae 76_1 Coelacanth 222 209 No Lepisosteus oculatus 76 Spotted gar 233 217 No Gadus morhua 76_1 Atlantic cod 220 206 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 290 272 No Takifugu rubripes 76_4 Torafugu 669 623 No Gasterosteus aculeatus 76_1 Three-spined stickleback 298 269 No Oryzias latipes 76_1 Japanese medaka 263 241 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 236 222 No Poecilia formosa 76 Amazon molly 244 228 No Oreochromis niloticus 76_1.0 Nile tilapia 310 293 No Astyanax mexicanus 76 Mexican tetra 229 214 No Danio rerio 76_9 Zebrafish 428 390 No Oikopleura dioica 85 78 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 200 139 No Ciona intestinalis 76 Vase tunicate 108 95 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 147 137 No Adineta vaga 307 272 No Octopus bimaculoides 280 142 126 No Crassostrea gigas 22 Pacific oyster 115 102 No Lottia gigantea Owl limpet 137 112 No Helobdella robusta 113 98 No Capitella sp. I 154 132 No Danaus plexippus OGS1.0 Monarch butterfly 102 85 No Heliconius melpomene Postman butterfly 103 78 No Bombyx mori Domestic silkworm 90 77 No Nasonia vitripennis Jewel wasp 94 71 No Apis mellifera 38.2d (Not maintained) Honey bee 214 147 No Harpegnathos saltator v3.3 Jerdon's jumping ant 105 84 No Linepithema humile v1.1 Argentine ant 89 79 No Pogonomyrmex barbatus v1.2 Red harvester ant 91 82 No Solenopsis invicta v.2.2.3 Red fire ant 70 64 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 101 80 No Atta cephalotes v1.1 85 77 No Camponotus floridanus v3.3 Florida carpenter ant 101 84 No Lucilia cuprina Australian sheep blowfly 77 67 No Drosophila grimshawi 1.3 103 82 No Drosophila willistoni 1.3 111 87 No Drosophila pseudoobscura 2.13 101 83 No Drosophila persimilis 1.3 99 82 No Drosophila suzukii 94 85 No Drosophila yakuba 1.3 102 88 No Drosophila simulans 1.3 88 76 No Drosophila sechellia 1.3 109 86 No Drosophila melanogaster 76_5 Fruit fly 286 213 No Drosophila erecta 1.3 117 86 No Drosophila ananassae 1.3 120 92 No Drosophila virilis 1.2 99 83 No Drosophila mojavensis 1.3 120 85 No Megaselia scalaris 22 28 25 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 131 98 No Culex pipiens quinquefasciatus Southern house mosquito 115 78 No Anopheles darlingi 22 American malaria mosquito 77 64 No Anopheles gambiae 49_3j African malaria mosquito 95 78 No Tribolium castaneum 3.0 Red flour beetle 108 88 No Pediculus humanus corporis Human body louse 103 83 No Acyrthosiphon pisum Pea aphid 112 91 No Rhodnius prolixus 22 94 82 No Daphnia pulex Common water flea 112 95 No Strigamia maritima 22 113 98 No Sarcoptes scabiei 68 62 No Tetranychus urticae Two-spotted spider mite 89 79 No Ixodes scapularis Black-legged tick 86 73 No Pristionchus pacificus 82 64 No Meloidogyne incognita Southern root-knot nematode 100 92 No Meloidogyne hapla 51 50 No Onchocerca volvulus 22 92 79 No Brugia malayi WS250 Agent of lymphatic filariasis 122 102 No Caenorhabditis japonica 77 72 No Caenorhabditis brenneri 129 111 No Caenorhabditis remanei 113 93 No Caenorhabditis elegans 76_235 Roundworm 209 163 No Caenorhabditis briggsae 2 96 81 No Trichinella spiralis 22 94 72 No Hymenolepis microstoma 89 71 No Echinococcus multilocularis 97 80 No Echinococcus granulosus 100 81 No Taenia solium Pork tapeworm 100 81 No Schistosoma mansoni 92 83 No Mnemiopsis leidyi Sea walnut 83 71 No Thelohanellus kitauei 30 23 No Acropora digitifera v1.0 131 114 No Nematostella vectensis 1.0 Starlet sea anemone 132 113 No Hydra vulgaris 107 85 No Amphimedon queenslandica 235 177 No Trichoplax adhaerens 91 76 No Proterospongia sp. ATCC 50818 75 68 No Monosiga brevicollis 55 52 No Sphaeroforma arctica JP610 52 47 No Capsaspora owczarzaki ATCC 30864 81 69 No Conidiobolus coronatus NRRL28638 v1.0 52 44 No Mortierella verticillata NRRL 6337 66 57 No Phycomyces blakesleeanus 58 49 No Rhizopus oryzae RA 99-880 62 55 No Mucor circinelloides 58 50 No Rhizomucor miehei CAU432 46 44 No Malassezia globosa CBS 7966 42 40 No Sporisorium reilianum 22 28 28 No Ustilago maydis 32 27 No Mixia osmundae IAM 14324 v1.0 29 29 No Cronartium quercuum f. sp. fusiforme G11 v1.0 35 29 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 38 31 No Melampsora laricis-populina 40 33 No Rhodotorula graminis WP1 v1.0 36 33 No Sporobolomyces roseus IAM 13481 33 27 No Microbotryum violaceum 22 30 30 No Wallemia sebi v1.0 33 24 No Sphaerobolus stellatus v1.0 58 47 No Piloderma croceum F 1598 v1.0 77 58 No Serpula lacrymans var. lacrymans S7.9 36 29 No Coniophora puteana 36 33 No Hydnomerulius pinastri v2.0 38 34 No Paxillus rubicundulus Ve08.2h10 v1.0 48 40 No Pisolithus microcarpus 441 v1.0 55 43 No Pisolithus tinctorius Marx 270 v1.0 41 35 No Scleroderma citrinum Foug A v1.0 47 38 No Coprinopsis cinerea okayama7 130 v3 43 37 No Pleurotus ostreatus Oyster mushroom 51 36 No Amanita thiersii Skay4041 v1.0 36 29 No Amanita muscaria Koide v1.0 Fly agaric 46 38 No Galerina marginata v1.0 55 44 No Hebeloma cylindrosporum h7 v2.0 54 46 No Laccaria bicolor S238N-H82 53 44 No Agaricus bisporus var. bisporus 33 30 No Schizophyllum commune 38 32 No Stereum hirsutum FP-91666 SS1 v1.0 45 36 No Heterobasidion annosum 41 33 No Gloeophyllum trabeum v1.0 42 32 No Punctularia strigosozonata v1.0 31 28 No Sebacina vermifera MAFF 305830 v1.0 47 40 No Fomitiporia mediterranea v1.0 38 35 No Tulasnella calospora AL13/4D v1.0 59 52 No Postia placenta 56 41 No Wolfiporia cocos MD-104 SS10 v1.0 44 35 No Fomitopsis pinicola v1.0 45 36 No Fomitopsis pinicola FP-58527 SS1 v3.0 45 36 No Phanerochaete chrysosporium RP-78 2.1 39 30 No Dichomitus squalens 41 34 No Trametes versicolor v1.0 55 35 No Tremella mesenterica Witches' butter 28 23 No Daldinia eschscholzii EC12 v1.0 32 28 No Apiospora montagnei NRRL 25634 v1.0 32 28 No Magnaporthe poae ATCC 64411 22 31 26 No Magnaporthe grisea 70-15 31 27 No Podospora anserina 30 26 No Sporotrichum thermophile ATCC 42464 28 24 No Thielavia terrestris NRRL 8126 29 25 No Chaetomium globosum CBS 148.51 27 23 No Neurospora tetrasperma 31 27 No Neurospora discreta FGSC 8579 32 28 No Neurospora crassa OR74A 33 29 No Cryphonectria parasitica Chestnut blight fungus 32 29 No Verticillium albo-atrum VaMs.102 29 27 No Verticillium dahliae VdLs.17 31 28 No Acremonium alcalophilum v 1.0 35 31 No Glomerella graminicola 22 34 30 No Fusarium graminearum 34 31 No Nectria haematococca mpVI 35 32 No Fusarium oxysporum f. sp. lycopersici 4286 35 31 No Fusarium verticillioides 7600 32 28 No Trichoderma asperellum CBS 433.97 v1.0 32 29 No Trichoderma atroviride 33 30 No Trichoderma citrinoviride v1.0 31 28 No Trichoderma reesei 1.2 32 28 No Trichoderma virens Gv29-8 34 30 No Trichoderma longibrachiatum ATCC 18648 v1.0 33 29 No Trichoderma harzianum CBS 226.95 v1.0 35 31 No Amorphotheca resinae v1.0 Creosote fungus 35 31 No Botrytis cinerea B05.10 34 31 No Sclerotinia sclerotiorum 34 31 No Blumeria graminis 22 30 29 No Didymella exigua CBS 183.55 v1.0 32 28 No Leptosphaeria maculans 22 30 25 No Setosphaeria turcica v1.0 31 27 No Cochliobolus miyabeanus ATCC 44560 v1.0 31 29 No Cochliobolus victoriae FI3 v1.0 34 30 No Cochliobolus carbonum 26-R-13 v1.0 29 28 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 30 26 No Alternaria brassicicola 31 27 No Cochliobolus lunatus m118 v2.0 35 31 No Pyrenophora teres f. teres 22 32 29 No Pyrenophora tritici-repentis 31 28 No Stagonospora nodorum 32 29 No Mycosphaerella graminicola IPO323 33 31 No Zasmidium cellare ATCC 36951 v1.0 40 36 No Dothistroma septosporum 45 40 No Septoria musiva v1.0 34 30 No Mycosphaerella fijiensis CIRAD86 39 33 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 29 26 No Paracoccidioides brasiliensis Pb18 33 29 No Coccidioides posadasii RMSCC 3488 32 29 No Coccidioides immitis RS 33 29 No Ajellomyces dermatitidis SLH14081 33 28 No Histoplasma capsulatum class NAmI strain WU24 26 22 No Microsporum canis CBS 113480 30 26 No Trichophyton equinum CBS 127.97 31 28 No Trichophyton verrucosum HKI 0517 27 24 No Arthroderma benhamiae CBS 112371 28 25 No Trichophyton tonsurans CBS 112818 31 28 No Trichophyton rubrum CBS 118892 32 29 No Uncinocarpus reesii 1704 25 21 No Aspergillus zonatus v1.0 31 30 No Penicillium chrysogenum Wisconsin 54-1255 31 27 No Penicillium chrysogenum v1.0 32 28 No Aspergillus acidus v1.0 33 29 No Aspergillus fumigatus Af293 31 27 No Aspergillus brasiliensis v1.0 33 29 No Aspergillus nidulans FGSC A4 33 29 No Aspergillus sydowii v1.0 33 29 No Aspergillus versicolor v1.0 31 27 No Aspergillus glaucus 33 29 No Aspergillus carbonarius ITEM 5010 33 29 No Neosartorya fischeri NRRL 181 35 31 No Aspergillus terreus NIH2624 33 28 No Aspergillus tubingensis v1.0 33 29 No Aspergillus wentii v1.0 35 31 No Aspergillus oryzae RIB40 27 24 No Aspergillus niger 22 31 27 No Aspergillus niger ATCC 1015 18 17 No Aspergillus flavus NRRL3357 32 28 No Aspergillus clavatus NRRL 1 34 30 No Penicillium marneffei ATCC 18224 40 36 No Tuber melanosporum Mel28 22 38 30 No Tuber melanosporum Vittad Perigord truffle 39 31 No Hansenula polymorpha v2.0 25 20 No Dekkera bruxellensis CBS 2499 v2.0 20 20 No Pichia membranifaciens v1.0 18 18 No Candida tanzawaensis NRRL Y-17324 v1.0 25 23 No Candida dubliniensis CD36 24 21 No Candida tropicalis MYA-3404 22 19 No Candida parapsilosis 21 19 No Candida albicans SC5314 24 22 No Lodderomyces elongisporus NRRL YB-4239 21 18 No Babjeviella inositovora NRRL Y-12698 v1.0 20 19 No Pichia stipitis CBS 6054 22 19 No Candida guilliermondii ATCC 6260 27 22 No Hyphopichia burtonii NRRL Y-1933 v1.0 22 22 No Debaromyces hansenii 27 22 No Wickerhamomyces anomalus 33 23 No Pichia pastoris GS115 24 21 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 11 11 No Yarrowia lipolytica CLIB122 30 25 No Candida lusitaniae ATCC 42720 25 21 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 20 20 No Vanderwaltozyma polyspora DSM 70294 33 26 No Candida glabrata CBS138 33 26 No Kluyveromyces thermotolerans CBS 6340 25 21 No Lachancea kluyveri 28 24 No Kluyveromyces waltii 20 17 No Ashbya gossypii ATCC 10895 25 20 No Zygosaccharomyces rouxii 29 23 No Saccharomyces mikatae MIT 28 24 No Saccharomyces paradoxus MIT 29 24 No Saccharomyces cerevisiae 76 Baker's yeast 31 26 No Saccharomyces bayanus MIT 30 24 No Kluyveromyces lactis 25 21 No Schizosaccharomyces cryophilus OY26 22 32 30 No Schizosaccharomyces octosporus yFS286 32 29 No Schizosaccharomyces japonicus yFS275 34 28 No Schizosaccharomyces pombe Fission yeast 35 29 No Catenaria anguillulae PL171 v1.0 60 55 No Allomyces macrogynus ATCC 38327 105 94 No Spizellomyces punctatus DAOM BR117 54 45 No Dictyostelium discoideum 137 103 No Dictyostelium purpureum 98 79 No Entamoeba dispar 1.2 38 37 No Entamoeba invadens 1.2 44 42 No Entamoeba histolytica 1 43 42 No Selaginella moellendorffii 135 88 No Pinus taeda Loblolly pine 93 86 No Picea abies Norway spruce 202 107 No Eucalyptus grandis v201 Rose gum 186 161 No Theobroma cacao B97-61/B2 v1 Cacao 135 103 No Gossypium raimondii v221 576 425 No Citrus clementina v165 242 172 No Citrus sinensis v154 Sweet orange 263 186 No Thellungiella halophila v173 199 154 No Brassica rapa Chiifu-401 1.2 Field mustard 169 154 No Capsella rubella v183 200 141 No Arabidopsis lyrata Lyrate rockcress 209 141 No Arabidopsis thaliana 10 Thale cress 270 186 No Carica papaya Papaya 98 75 No Medicago truncatula Barrel medic 343 228 No Phaseolus vulgaris v186 French bean 149 119 No Glycine max v109 Soybean 363 272 No Cucumis sativus v122 Cucumber 173 161 No Fragaria vesca Wild strawberry 182 127 No Malus domestica v196 Apple 347 271 No Prunus persica v139 Peach 192 131 No Linum usitatissimum v200 Flax 162 150 No Manihot esculenta v147 Cassava 195 153 No Populus trichocarpa v156 Black cottonwood 305 212 No Vitis vinifera Wine grape 108 85 No Mimulus guttatus v140 Spotted monkey flower 210 126 No Solanum lycopersicum v.2.3 Tomato 151 119 No Solanum tuberosum Potato 218 162 No Actinidia chinensis Hongyang 175 132 No Aquilegia coerulea v195 408 218 No Triticum urartu 22 140 98 No Triticum aestivum 22 Bread wheat 318 259 No Aegilops tauschii 22 93 85 No Brachypodium distachyon Stiff brome 163 121 No Oryza barthii 22 African wild rice 142 123 No Oryza meridionalis 22 141 123 No Oryza glumaepatula 22 145 125 No Oryza glaberrima African rice 122 98 No Oryza punctata 22 142 111 No Oryza nivara 22 158 138 No Oryza brachyantha 22 Malo sina 130 104 No Oryza sativa ssp. japonica 5.0 Japanese rice 270 185 No Oryza sativa v193 Rice 269 183 No Phyllostachys heterocycla var. pubescens Kikko-chiku 140 104 No Panicum virgatum v202 Switchgrass 384 266 No Setaria italica v164 Foxtail millet 256 159 No Zea mays subsp. mays Maize 252 181 No Zea mays v181 Maize 287 215 No Sorghum bicolor Sorghum 162 104 No Musa balbisiana Balbis banana 145 120 No Musa acuminata 22 Wild Malaysian banana 144 130 No Amborella trichopoda 22 62 61 No Physcomitrella patens 136 95 No Coccomyxa subellipsoidea sp. C-169 v2 55 45 No Asterochloris sp. Cgr/DA1pho v1.0 33 28 No Chlorella variabilis sp. NC64A 53 41 No Chlorella vulgaris 41 35 No Volvox carteri f. nagariensis 45 38 No Volvox carteri v199 53 42 No Chlamydomonas reinhardtii 4.0 54 51 No Ostreococcus sp. RCC809 26 24 No Ostreococcus lucimarinus CCE9901 34 30 No Ostreococcus tauri 27 24 No Bathycoccus prasinos 37 32 No Micromonas sp. RCC299 38 35 No Micromonas pusilla CCMP1545 v3.0 42 37 No Cyanidioschyzon merolae strain 10D 22 17 16 No Cyanidioschyzon merolae 17 16 No Porphyridium purpureum 02_2012 30 30 No Thecamonas trahens ATCC 50062 64 59 No Bigelowiella natans CCMP2755 22 133 110 No Giardia lamblia 2.3 14 14 No Cyanophora paradoxa 45 43 No Leishmania mexicana 2.4 43 42 No Leishmania major strain Friedlin 70 59 No Leishmania infantum JPCM5 2.4 61 42 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 65 39 No Trypanosoma vivax 34 31 No Trypanosoma cruzi strain CL Brener 45 31 No Trypanosoma congolense 2.4 42 28 No Trypanosoma brucei gambiense v4.1 31 31 No Trypanosoma brucei TREU927 v4.1 40 32 No Ectocarpus siliculosus 68 57 No Aureococcus anophagefferens 59 49 No Albugo laibachii 22 64 54 No Pythium iwayamai DAOM BR242034 22 53 48 No Pythium arrhenomanes ATCC 12531 22 43 40 No Pythium ultimum v1.7-2 57 54 No Pythium aphanidermatum DAOM BR444 22 47 44 No Pythium irregulare DAOM BR486 22 49 45 No Pythium vexans DAOM BR484 22 44 42 No Phytophthora ramorum 1.1 Sudden oak death agent 69 57 No Phytophthora sojae 1.1 65 56 No Phytophthora infestans T30-4 66 59 No Phytophthora capsici 61 52 No Hyaloperonospora arabidopsidis 22 58 49 No Phaeodactylum tricornutum CCAP 1055/1 35 31 No Fragilariopsis cylindrus 96 70 No Thalassiosira pseudonana CCMP1335 39 37 No Perkinsus marinus ATCC 50983 77 64 No Paramecium tetraurelia 203 153 No Tetrahymena thermophila SB210 1 124 70 No Ichthyophthirius multifiliis strain G5 30 27 No Cryptosporidium hominis 24 21 No Cryptosporidium muris 26 24 No Cryptosporidium parvum Iowa II 28 25 No Neospora caninum 42 35 No Toxoplasma gondii VEG 32 28 No Toxoplasma gondii ME49 34 30 No Toxoplasma gondii GT1 33 29 No Babesia bovis T2Bo 48 44 No Theileria parva 27 26 No Theileria annulata 22 21 No Plasmodium falciparum 3D7 31 27 No Plasmodium vivax SaI-1 7.0 29 25 No Plasmodium knowlesi strain H 34 27 No Plasmodium yoelii ssp. yoelii 1 24 21 No Plasmodium chabaudi 31 28 No Plasmodium berghei ANKA 29 27 No Symbiodinium minutum clade B1 v1.2 460 428 No Naegleria gruberi 113 78 No Trichomonas vaginalis 230 207 No Guillardia theta CCMP2712 v1.0 97 83 No Emiliania huxleyi CCMP1516 137 121 No Conexibacter woesei DSM 14684 1 1 No Nakamurella multipartita DSM 44233 1 1 No Streptomyces sp. SirexAA-E 1 1 No Clostridium thermocellum ATCC 27405 1 1 No Ruminococcus albus 7 3 3 No Clostridium lentocellum DSM 5427 1 1 No Eubacterium rectale ATCC 33656 1 1 No Coprococcus sp. ART55/1 1 1 No Clostridium acetobutylicum ATCC 824 1 1 No Enterococcus hirae ATCC 9790 1 1 No Enterococcus faecalis 62 1 1 No Lactococcus lactis subsp. cremoris MG1363 1 1 No Streptococcus parasanguinis ATCC 15912 1 1 No Streptococcus sanguinis SK36 1 1 No Streptococcus oralis Uo5 1 1 No Streptococcus gordonii str. Challis substr. CH1 1 1 No Solibacillus silvestris StLB046 1 1 No Oceanobacillus iheyensis HTE831 1 1 No Bacillus sp. JS 1 1 No Bacillus amyloliquefaciens FZB42 1 1 No Bacillus subtilis subsp. subtilis str. 168 1 1 No Bacillus licheniformis DSM 13 = ATCC 14580 1 1 No Bacillus halodurans C-125 1 1 No Bacillus pseudofirmus OF4 1 1 No Bacillus coagulans 2-6 1 1 No Staphylococcus aureus subsp. aureus JH1 1 1 No Spirosoma linguale DSM 74 1 1 No Flavobacterium indicum GPTSA100-9 1 1 No Parachlamydia acanthamoebae UV-7 1 1 No Candidatus Chloracidobacterium thermophilum B 1 1 No Acidovorax citrulli AAC00-1 1 1 No Acidovorax avenae subsp. avenae ATCC 19860 1 1 No Candidatus Caldiarchaeum subterraneum 1 1 No Thermoplasmatales archaeon BRNA1 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 377 324 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 225 169 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 130 97 No Ascaris suum Victoria/Ghent Pig roundworm 87 70 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 156 125 No Cryptococcus neoformans var. grubii H99 29 25 No Cryptococcus neoformans B-3501A 36 28 No Cryptococcus neoformans JEC21 33 25 No Paracoccidioides brasiliensis Pb01 32 27 No Paracoccidioides brasiliensis Pb03 31 27 No Coccidioides posadasii str. Silveira 31 28 No Coccidioides immitis RMSCC 3703 27 25 No Coccidioides immitis RMSCC 2394 33 29 No Coccidioides immitis H538.4 31 26 No Ajellomyces dermatitidis ER-3 32 28 No Histoplasma capsulatum H143 30 26 No Histoplasma capsulatum H88 32 28 No Histoplasma capsulatum G186AR 33 29 No Aspergillus fumigatus A1163 33 29 No Candida albicans WO-1 22 20 No Saccharomyces cerevisiae UC5 25 24 No Saccharomyces cerevisiae PW5 28 23 No Saccharomyces cerevisiae FL100 21 17 No Saccharomyces cerevisiae CLIB382 2 2 No Saccharomyces cerevisiae CLIB324 14 13 No Saccharomyces cerevisiae CBS7960 23 22 No Saccharomyces cerevisiae YJM269 26 21 No Saccharomyces cerevisiae T7 31 26 No Saccharomyces cerevisiae FostersB 25 22 No Saccharomyces cerevisiae FostersO 18 18 No Saccharomyces cerevisiae VL3 25 23 No Saccharomyces cerevisiae Vin13 26 22 No Saccharomyces cerevisiae LalvinQA23 22 22 No Saccharomyces cerevisiae AWRI796 22 22 No Saccharomyces cerevisiae Sigma1278b 30 26 No Saccharomyces cerevisiae W303 28 26 No Saccharomyces cerevisiae JAY291 26 25 No Saccharomyces cerevisiae AWRI1631 17 16 No Saccharomyces cerevisiae YPS163 10 10 No Saccharomyces cerevisiae M22 12 12 No Saccharomyces cerevisiae T73 11 11 No Saccharomyces cerevisiae CLIB215 18 17 No Saccharomyces cerevisiae Y10 8 7 No Saccharomyces cerevisiae YJM789 30 25 No Saccharomyces cerevisiae YJM789 31 26 No Saccharomyces cerevisiae RM11-1a 31 26 No Saccharomyces cerevisiae RM11-1a 31 26 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 31 26 No Schizosaccharomyces pombe 972h- 35 29 No Batrachochytrium dendrobatidis JEL423 37 34 No Batrachochytrium dendrobatidis JAM81 37 32 No Theobroma cacao Matina 1-6 v0.9 Cacao 141 100 No Hordeum vulgare 22 Domesticated barley 119 112 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 180 136 No Trypanosoma brucei Lister 427 v4.1 40 32 No Neospora caninum Nc-Liverpool 6.2 42 35 No Plasmodium falciparum HB3 24 20 No Plasmodium falciparum Dd2 19 16 No Crinalium epipsammum PCC 9333 2 2 No Clostridium thermocellum DSM 1313 1 1 No Clostridium saccharoperbutylacetonicum N1-4(HMT) 1 1 No Clostridium acetobutylicum DSM 1731 1 1 No Clostridium acetobutylicum EA 2018 1 1 No Carnobacterium maltaromaticum LMA28 1 1 No Enterococcus faecalis D32 1 1 No Enterococcus faecalis OG1RF 1 1 No Lactococcus lactis subsp. cremoris KW2 1 1 No Lactococcus lactis subsp. cremoris NZ9000 1 1 No Streptococcus iniae SF1 1 1 No Streptococcus parasanguinis FW213 1 1 No Streptococcus suis ST3 1 1 No Streptococcus suis D12 1 1 No Bacillus amyloliquefaciens subsp. plantarum sequencing 1 1 No Bacillus amyloliquefaciens subsp. plantarum UCMB5033 1 1 No Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 1 1 No Bacillus amyloliquefaciens subsp. plantarum UCMB5113 1 1 No Bacillus amyloliquefaciens subsp. plantarum UCMB5036 1 1 No Bacillus amyloliquefaciens subsp. plantarum CAU B946 1 1 No Bacillus amyloliquefaciens LFB112 1 1 No Bacillus amyloliquefaciens CC178 1 1 No Bacillus amyloliquefaciens Y2 1 1 No Bacillus amyloliquefaciens IT-45 1 1 No Bacillus amyloliquefaciens XH7 1 1 No Bacillus amyloliquefaciens LL3 1 1 No Bacillus amyloliquefaciens TA208 1 1 No Bacillus amyloliquefaciens DSM 7 1 1 No Bacillus subtilis PY79 1 1 No Bacillus subtilis XF-1 1 1 No Bacillus subtilis QB928 1 1 No Bacillus subtilis BSn5 1 1 No Bacillus subtilis subsp. subtilis str. BAB-1 1 1 No Bacillus subtilis subsp. subtilis str. BSP1 1 1 No Bacillus subtilis subsp. subtilis str. RO-NN-1 1 1 No Bacillus subtilis subsp. subtilis 6051-HGW 1 1 No Bacillus subtilis subsp. spizizenii TU-B-10 1 1 No Bacillus subtilis subsp. spizizenii str. W23 1 1 No Bacillus subtilis subsp. natto BEST195 1 1 No Bacillus licheniformis DSM 13 = ATCC 14580 1 1 No Bacillus cereus subsp. cytotoxis NVH 391-98 1 1 No Bacillus toyonensis BCT-7112 1 1 No Bacillus thuringiensis HD-771 1 1 No Bacillus thuringiensis HD-789 1 1 No Bacillus thuringiensis MC28 1 1 No Bacillus thuringiensis serovar konkukian str. 97-27 1 1 No Bacillus thuringiensis serovar kurstaki str. HD73 1 1 No Bacillus thuringiensis BMB171 1 1 No Bacillus cereus B4264 1 1 No Bacillus cereus G9842 1 1 No Staphylococcus aureus subsp. aureus MSHR1132 1 1 No Staphylococcus aureus CA-347 1 1 No Staphylococcus aureus Bmb9393 1 1 No Staphylococcus aureus M1 1 1 No Staphylococcus aureus 08BA02176 1 1 No Staphylococcus aureus 04-02981 1 1 No Staphylococcus aureus RF122 1 1 No Staphylococcus aureus subsp. aureus Z172 1 1 No Staphylococcus aureus subsp. aureus 6850 1 1 No Staphylococcus aureus subsp. aureus SA957 1 1 No Staphylococcus aureus subsp. aureus CN1 1 1 No Staphylococcus aureus subsp. aureus SA40 1 1 No Staphylococcus aureus subsp. aureus 11819-97 1 1 No Staphylococcus aureus subsp. aureus M013 1 1 No Staphylococcus aureus subsp. aureus HO 5096 0412 1 1 No Staphylococcus aureus subsp. aureus VC40 1 1 No Staphylococcus aureus subsp. aureus T0131 1 1 No Staphylococcus aureus subsp. aureus LGA251 1 1 No Staphylococcus aureus subsp. aureus ECT-R 2 1 1 No Staphylococcus aureus subsp. aureus JKD6159 1 1 No Staphylococcus aureus subsp. aureus ED133 1 1 No Staphylococcus aureus subsp. aureus ED98 1 1 No Staphylococcus aureus subsp. aureus TW20 1 1 No Staphylococcus aureus subsp. aureus 55/2053 1 1 No Staphylococcus aureus subsp. aureus TCH60 1 1 No Staphylococcus aureus subsp. aureus str. JKD6008 1 1 No Staphylococcus aureus subsp. aureus 71193 1 1 No Staphylococcus aureus subsp. aureus S0385 1 1 No Staphylococcus aureus subsp. aureus Mu3 1 1 No Staphylococcus aureus subsp. aureus USA300_TCH1516 1 1 No Staphylococcus aureus subsp. aureus USA300_FPR3757 1 1 No Staphylococcus aureus subsp. aureus JH9 1 1 No Staphylococcus aureus subsp. aureus MSSA476 1 1 No Staphylococcus aureus subsp. aureus MRSA252 1 1 No Staphylococcus aureus subsp. aureus MW2 1 1 No Staphylococcus aureus subsp. aureus N315 1 1 No Staphylococcus aureus subsp. aureus Mu50 1 1 No Staphylococcus aureus subsp. aureus COL 1 1 No Staphylococcus aureus subsp. aureus NCTC 8325 1 1 No Bacteroides fragilis 638R 1 1 No Bacteroides fragilis NCTC 9343 1 1 No Homo sapiens 75_37 (old version GRC) Human 988 890 No Homo sapiens Human 324 296 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 218 191 No Heliconius numata 72 46 No Loa loa v3.3 (Request) Eye worm 91 75 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 84 78 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 80 70 No Moniliophthora perniciosa FA553 11 10 No Encephalitozoon intestinalis 9 9 No Encephalitozoon cuniculi (endoparasite) 9 9 No Picea sitchensis Sitka spruce 18 16 No Lotus japonicus 97 77 No Malus x domestica (Duplicate) Apple 347 271 No Ricinus communis Castor bean 97 84 No Nicotiana benthamiana 0.4.4 (Early draft) 174 163 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 150 118 No Solanum lycopersicum v2.3 (Early assembly) Tomato 151 119 No Phoenix dactylifera Date palm 50 45 No Homo sapiens 69_37 Human 239 207 No Pan troglodytes 69_2.1.4 Chimpanzee 197 177 No Gorilla gorilla 69_3.1 Western gorilla 214 198 No Pongo abelii 69_2 Sumatran orangutan 203 182 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 193 175 No Macaca mulatta 69_1 Rhesus monkey 212 192 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 220 201 No Otolemur garnettii 69_3 Small-eared galago 200 185 No Microcebus murinus 69_1 Gray mouse lemur 136 126 No Rattus norvegicus 69_3.4 Norway rat 243 218 No Mus musculus 69_38 House mouse 217 190 No Dipodomys ordii 69_1 Ord's kangaroo rat 146 135 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 172 163 No Cavia porcellus 69_3 Domestic guinea pig 189 178 No Oryctolagus cuniculus 69_2 Rabbit 195 186 No Ochotona princeps 69 American pika 138 126 No Tupaia belangeri 69 Northern tree shrew 123 117 No Sus scrofa 69_10.2 Pig 191 174 No Bos taurus 69_3.1 Cattle 202 183 No Vicugna pacos 69_1 Alpaca 99 94 No Tursiops truncatus 69_1 Bottlenose dolphin 175 159 No Mustela putorius furo 69_1.0 Domestic ferret 193 178 No Ailuropoda melanoleuca 69_1 Giant panda 192 179 No Canis familiaris 69_3.1 Dog 202 183 No Felis catus 69 Domestic cat 130 115 No Equus caballus 69_2 Horse 194 179 No Myotis lucifugus 69_2.0 Little brown bat 203 189 No Pteropus vampyrus 69_1 Large flying fox 176 161 No Sorex araneus 69_1 European shrew 116 113 No Erinaceus europaeus 69 Western European hedgehog 113 110 No Procavia capensis 69_1 Cape rock hyrax 138 124 No Loxodonta africana 69_3 African savanna elephant 200 185 No Echinops telfairi 69 Small Madagascar hedgehog 139 134 No Dasypus novemcinctus 69_2 Nine-banded armadillo 114 111 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 110 104 No Macropus eugenii 69_1.0 Tammar wallaby 153 141 No Sarcophilus harrisii 69_7.0 Tasmanian devil 182 165 No Monodelphis domestica 69_5 Gray short-tailed opossum 200 181 No Ornithorhynchus anatinus 69_5 Platypus 149 136 No Petromyzon marinus 69_7.0 Sea lamprey 96 85 No Meleagris gallopavo 69_2 Turkey 132 123 No Gallus gallus 69_2 Chicken 159 143 No Taeniopygia guttata 69_3.2.4 Zebra finch 158 143 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 154 141 No Anolis carolinensis 69_2.0 Green anole 174 157 No Xenopus tropicalis 69_4.2 Tropical clawed frog 178 159 No Latimeria chalumnae 69_1 Coelacanth 181 169 No Gadus morhua 69_1 Atlantic cod 214 200 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 232 217 No Takifugu rubripes 69_4 Torafugu 222 209 No Gasterosteus aculeatus 69_1 Three-spined stickleback 238 214 No Oryzias latipes 69_1 Japanese medaka 218 197 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 236 222 No Oreochromis niloticus 69_1.0 Nile tilapia 231 217 No Danio rerio 69_9 Zebrafish 259 234 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 68 57 No Ciona intestinalis 69 Vase tunicate 103 90 No Drosophila melanogaster 69_5 Fruit fly 114 90 No Caenorhabditis elegans 69_215 Roundworm 102 86 No Saccharomyces cerevisiae 69_4 Baker's yeast 31 26 No Arabidopsis thaliana 10 Thale cress 177 134 No 1_Upper_euphotic (meta-genome) 2 2 No 2_050719S (meta-genome) 1 1 No 4_050719Q (meta-genome) 2 2 No 4_Deep_abyss (meta-genome) 1 1 No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 1 1 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 2 2 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 1 1 No Atta cephalotes fungus garden (ACEF) (meta-genome) 3 3 No Core Eukaryotic Genes 458 (CEGMA) 30 30 No Cyphomyrmex longiscapus fungus garden (meta-genome) 1 1 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 6 6 No Dump top (Dump top) (meta-genome) 3 3 No Endophytic microbiome from Rice (meta-genome) 2 2 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 1 1 No Fungus garden combined (combined) (meta-genome) 2 2 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 1 1 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 5 5 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 2 2 No Human Gut Community Subject 8 (meta-genome) 1 1 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 4 4 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 3 3 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 1 1 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 3 3 No NCBI 2017_08 genome 169957 150215 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 6 5 No Protozoadb 2010_08 (Protozoadb) 1519 1350 No Sludge/Australian, Phrap Assembly (meta-genome) 1 1 No Soil microbial communities from Minnesota Farm (meta-genome) 5 5 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 3 3 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 4 4 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 3 3 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 2 2 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 1 1 No STRING v9.0.5 (STRING) 11467 9796 No Termite Protist Endosymbiont Community (meta-genome) 3 2 No Uniprot 2018_03 genome 132153 112843 No Global Ocean Sampling Expedition (GOS) 574 527 No NCBI plasmid sequences (Plasmids) 3 3 No NCBI viral sequences (Viral) 97 96 No PDB chains (SCOP 1.75 ) (PDB) 156 155 No Protein Data Bank (all PDB sequenc) 2534 2451 No SCOP2 SCOPe CATH ECOD (all domain sequ) 4332 4332 Yes TargetDB 953 740 No UniProt 110 100
