SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


YfbU-like superfamily domain assignments
in
STRING v9.0.5

Assignment details

(show help)


STRING v9.0.5 (STRING) has 119 significant domains in 119 proteins.

     

Sequence ID   Evalue   Region   Family  
150340.VEA_003980   1.03e-66   1-166   YfbU-like  
155864.Z3555   1.1e-70   1-164   YfbU-like  
187410.y1624   1.23e-69   1-164   YfbU-like  
196162.Noca_4782   1.19e-43   52-244   YfbU-like  
196600.VV2347   1.83e-62   1-166   YfbU-like  
198214.SF2370   2.62e-70   1-164   YfbU-like  
198215.S2505   2.62e-70   1-164   YfbU-like  
199310.c2835   1.1e-70   1-164   YfbU-like  
205914.HS_1656   1.83e-61   1-162   YfbU-like  
206672.BL0816   2.22e-49   48-234   YfbU-like  
209261.t0529   1.23e-70   1-164   YfbU-like  
214092.YPO2563   1.23e-69   1-164   YfbU-like  
216895.VV1_2093   1.83e-62   1-166   YfbU-like  
218491.ECA3037   8.11e-68   1-164   YfbU-like  
220341.STY2565   1.23e-70   1-164   YfbU-like  
221988.MS2240   5.49e-59   1-164   YfbU-like  
223926.VP0990   1.22e-65   1-166   YfbU-like  
228400.HSM_1818   1.19e-62   1-164   YfbU-like  
229193.YP_2374   1.23e-69   1-164   YfbU-like  
243232.MJECS11   4.71e-49   2-168   YfbU-like  
243277.VC1871   1.31e-63   1-166   YfbU-like  
272620.KPN_02684   2.88e-51   1-121   YfbU-like  
272620.KPN_02685   0.000000000000248   1-39   YfbU-like  
272843.PM1500   1.15e-62   1-164   YfbU-like  
272994.SPAB_00641   1.44e-71   13-179   YfbU-like  
272994.SPAB_01002   4.05e-42   37-217   YfbU-like  
273123.YPTB2594   1.23e-69   1-164   YfbU-like  
278197.PEPE_0780   2.22e-35   2-186   YfbU-like  
290338.CKO_00501   6.15e-71   1-164   YfbU-like  
290339.ESA_00925   9.42e-69   1-164   YfbU-like  
295319.SPA0529   1.23e-70   1-164   YfbU-like  
298386.PBPRA2768   4.45e-65   1-166   YfbU-like  
300267.SDY_2490   1.1e-70   1-164   YfbU-like  
300268.SBO_2329   4.97e-70   1-164   YfbU-like  
300269.SSON_2351   1.1e-70   1-164   YfbU-like  
312309.VF_1794   6.8e-62   1-166   YfbU-like  
316275.VSAL_I2183   2.62e-61   1-166   YfbU-like  
316385.ECDH10B_2456   1.1e-70   1-164   YfbU-like  
316407.yfbU   1.1e-70   1-164   YfbU-like  
321314.SC2336   2.75e-70   1-164   YfbU-like  
322710.Avin_08970   1.18e-20   41-219   YfbU-like  
331111.EcE24377A_2587   1.02e-69   1-164   YfbU-like  
338187.VIBHAR_01542   2.22e-64   1-166   YfbU-like  
339671.Asuc_0543   9.81e-66   1-164   YfbU-like  
344609.SbBS512_E2670   1.1e-70   1-164   YfbU-like  
345073.VC0395_A1462   9.81e-64   4-170   YfbU-like  
349746.YpAngola_A1823   1.23e-69   1-164   YfbU-like  
349747.YpsIP31758_1445   1.23e-69   1-164   YfbU-like  
350058.Mvan_3262   6.54e-45   53-244   YfbU-like  
360102.YPA_2053   1.23e-69   1-164   YfbU-like  
362663.ECP_2333   1.1e-70   1-164   YfbU-like  
364106.UTI89_C2576   4.71e-71   5-170   YfbU-like  
373384.SFV_2361   5.89e-69   1-164   YfbU-like  
377628.YPN_2156   1.23e-69   1-164   YfbU-like  
380703.AHA_0893   2.22e-57   1-166   YfbU-like  
382245.ASA_3399   4.18e-56   1-166   YfbU-like  
386585.ECs3178   1.1e-70   1-164   YfbU-like  
386656.YPDSF_1971   1.23e-69   1-164   YfbU-like  
388396.VFMJ11_1926   7.19e-62   1-166   YfbU-like  
393305.YE1336   5.23e-70   1-164   YfbU-like  
399741.Spro_3314   1.09e-64   2-165   YfbU-like  
399742.Ent638_2838   3.4e-72   1-164   YfbU-like  
405955.APECO1_4270   4.71e-71   5-170   YfbU-like  
409438.ECSE_2551   1.1e-70   1-164   YfbU-like  
413502.Ctu_29200   4.05e-69   1-164   YfbU-like  
413997.ECB_02219   1.1e-70   1-164   YfbU-like  
41514.SARI_00565   4.32e-72   4-170   YfbU-like  
423368.SNSL254_A2520   1.44e-71   13-179   YfbU-like  
439843.SeSA_A2563   1.44e-71   13-179   YfbU-like  
439851.SeD_A2683   1.07e-71   13-179   YfbU-like  
439855.EcSMS35_2449   1.1e-70   1-164   YfbU-like  
444450.ECH74115_3433   1.1e-70   1-164   YfbU-like  
454166.SeAg_B2475   1.44e-71   13-179   YfbU-like  
454169.SeHA_C2575   1.44e-71   13-179   YfbU-like  
469008.ECBD_1365   1.1e-70   1-164   YfbU-like  
471854.Dfer_5731   7.98e-22   3-152   YfbU-like  
476213.SPC_1373   3.27e-71   13-179   YfbU-like  
479431.Namu_2683   5.62e-38   53-244   YfbU-like  
481805.EcolC_1358   1.1e-70   1-164   YfbU-like  
484021.KP1_2181   8.11e-16   2-173   YfbU-like  
484021.KP1_3931   1.07e-71   1-164   YfbU-like  
498217.ETAE_2395   4.18e-67   1-164   YfbU-like  
502800.YPK_1553   1.23e-69   1-164   YfbU-like  
502801.YPTS_2689   1.23e-69   1-164   YfbU-like  
507522.KPK_1463   9.81e-71   1-164   YfbU-like  
511145.b2294   1.1e-70   1-164   YfbU-like  
526222.Desal_2365   4.58e-23   1-174   YfbU-like  
526222.Desal_3788   2.09e-40   1-163   YfbU-like  
529507.PMI1769   5.49e-67   2-165   YfbU-like  
544404.ECSP_3168   1.1e-70   1-164   YfbU-like  
550537.SEN2317   1.23e-70   1-164   YfbU-like  
550538.SG2364   1.23e-70   1-164   YfbU-like  
554290.SSPA0493   1.23e-70   1-164   YfbU-like  
561229.Dd1591_1387   1.05e-67   1-164   YfbU-like  
561230.PC1_2778   7.98e-68   1-164   YfbU-like  
561231.Pecwa_1486   1.44e-67   1-164   YfbU-like  
573235.ECO26_3282   1.1e-70   1-164   YfbU-like  
574521.E2348C_2434   1.23e-70   1-164   YfbU-like  
575788.VS_1049   2.48e-63   1-166   YfbU-like  
579112.VCM66_1794   9.81e-64   4-170   YfbU-like  
579405.Dd703_2557   4.97e-68   1-164   YfbU-like  
585034.ECIAI1_2368   1.1e-70   1-164   YfbU-like  
585035.ECS88_2441   1.1e-70   1-164   YfbU-like  
585054.EFER_0875   1.7e-69   4-171   YfbU-like  
585055.EC55989_2538   1.1e-70   1-164   YfbU-like  
585056.ECUMN_2633   1.1e-70   1-164   YfbU-like  
585057.ECIAI39_2441   1.1e-70   1-164   YfbU-like  
585395.ECO103_2758   1.1e-70   1-164   YfbU-like  
585396.ECO111_3042   1.1e-70   1-164   YfbU-like  
585397.ECED1_2758   1.1e-70   1-164   YfbU-like  
590409.Dd586_2754   7.85e-67   1-164   YfbU-like  
593588.VCD_002491   9.81e-64   4-170   YfbU-like  
595494.Tola_1120   1.18e-56   1-166   YfbU-like  
595496.BWG_2068   1.1e-70   1-164   YfbU-like  
634176.NT05HA_2106   1.7e-62   1-164   YfbU-like  
634503.NT01EI_2691   1.26e-67   1-164   YfbU-like  
668336.D11S_0143   7.72e-62   1-164   YfbU-like  
882.DVU0227   5.23e-47   1-169   YfbU-like  
99287.STM2335   1.23e-70   1-164   YfbU-like  
 
Weak hits:
10228.JGI59022   0.00102   26-104   YfbU-like  
123214.PERMA_1007   0.0144   258-314   YfbU-like  
135651.CBN01997   0.0994   190-285   YfbU-like  
135651.CBN07660   0.0314   289-333   YfbU-like  
135651.CBN22104   0.0785   657-727   YfbU-like  
135651.CBN26135   0.0116   135-199   YfbU-like  
13616.ENSMODP00000017501   0.0112   54-103   YfbU-like  
190304.FN0638   0.00745   3-48   YfbU-like  
195103.CPF_1774   0.0929   117-181   YfbU-like  
205918.Psyr_1303   0.0248   77-130   YfbU-like  
2098.MHO_3080   0.000981   277-338   YfbU-like  
211110.gbs0401   0.0497   48-86   YfbU-like  
211110.gbs0731   0.0497   48-86   YfbU-like  
211110.gbs0978   0.0497   48-86   YfbU-like  
223926.VP1749   0.0196   18-76   YfbU-like  
224915.bbp072   0.0275   68-123   YfbU-like  
240292.Ava_1333   0.00641   19-84   YfbU-like  
240292.Ava_1712   0.00641   19-84   YfbU-like  
240292.Ava_4943   0.00641   19-84   YfbU-like  
240292.Ava_B0064   0.00641   19-84   YfbU-like  
240292.Ava_C0190   0.00641   19-84   YfbU-like  
243265.plu0805   0.0196   437-476   YfbU-like  
294381.C4LXU5   0.0144   194-265   YfbU-like  
29760.GSVIVG00016461001   0.0641   43-77   YfbU-like  
298386.PBPRA0678   0.0523   934-990   YfbU-like  
314275.MADE_00108   0.0497   66-140   YfbU-like  
319795.Dgeo_1335   0.0157   19-71   YfbU-like  
323848.Nmul_A2000   0.000106   6-83   YfbU-like  
324057.Pjdr2_2218   0.051   2-75   YfbU-like  
355278.LBF_4248   0.0017   185-224   YfbU-like  
360104.CCC13826_0823   0.0902   42-76   YfbU-like  
3694.eugene3.00161195   0.0615   244-282   YfbU-like  
3694.fgenesh4_pg.C_LG_VI001158   0.00942   66-150   YfbU-like  
3702.AT2G36650.1-P   0.0549   221-275   YfbU-like  
374847.Kcr_0598   0.0379   371-419   YfbU-like  
392499.Swit_2375   0.0523   414-470   YfbU-like  
395961.Cyan7425_2393   0.0353   11-56   YfbU-like  
399549.Msed_0784   0.0772   63-129   YfbU-like  
405531.BCG9842_0057   0.0157   25-117   YfbU-like  
405566.lhv_1125   0.00785   6-96   YfbU-like  
431947.PGN_1935   0.0876   379-454   YfbU-like  
44689.DDBDRAFT_0185966   0.0955   486-558   YfbU-like  
44689.DDBDRAFT_0218261   0.0602   201-246   YfbU-like  
456481.LEPBI_II0260   0.0017   185-224   YfbU-like  
457570.Nther_0774   0.00288   95-165   YfbU-like  
457570.Nther_1244   0.00484   15-56   YfbU-like  
458233.MCCL_plsB0001   0.0102   342-390   YfbU-like  
485918.Cpin_6699   0.0034   129-204   YfbU-like  
491915.Aflv_0189   0.051   82-176   YfbU-like  
4952.Q6C199   0.0196   200-269   YfbU-like  
4959.Q6BWT6   0.0183   15-102   YfbU-like  
504832.OCAR_7369   0.00314   23-61   YfbU-like  
5270.UM04834.1   0.0497   2-75   YfbU-like  
544556.GYMC61_2859   0.0129   121-191   YfbU-like  
5722.A2DNR0   0.0235   240-301   YfbU-like  
5722.A2EK24   0.0379   176-283   YfbU-like  
5722.A2F311   0.0107   173-212   YfbU-like  
5722.A2HE11   0.0405   254-362   YfbU-like  
5850.PKH_132200   0.0484   345-421   YfbU-like  
5911.XP_001008894   0.051   171-272   YfbU-like  
5911.XP_001019361   0.00994   65-164   YfbU-like  
6035.ECU07_1690   0.00314   107-157   YfbU-like  
6085.Q86GL9   0.0017   20-58   YfbU-like  
6085.XP_002154507   0.00719   20-59   YfbU-like  
6238.CBG19559   0.0235   31-92   YfbU-like  
63737.Npun_R6617   0.0144   368-402   YfbU-like  
67593.JGI137187   0.0889   122-202   YfbU-like  
7237.FBpp0273690   0.0144   36-91   YfbU-like  
7955.ENSDARP00000029313   0.0471   173-276   YfbU-like  
81824.JGI10323   0.0719   86-163   YfbU-like  
8364.ENSXETP00000035182   0.0471   432-475   YfbU-like  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a YfbU-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   27661 27661
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Desulfovibrio salexigens DSM 2638   2 2
No Yes Thiomonas intermedia K12   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Advenella kashmirensis WT001   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   1 1
No Yes Haemophilus somnus 129PT   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   2 2
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Corynebacterium diphtheriae INCA 402   1 1
No Yes Corynebacterium diphtheriae CDCE 8392   1 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Haemophilus somnus 2336   1 1
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Proteus mirabilis BB2000   2 2
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   2 2
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   2 2
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   9 9
No Yes Combined (meta-genome)   15 15
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   12 12
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   5 5
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   13 13
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   18 18
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   25233 25233
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   119 119
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1597 1597
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   10 10
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   32 32
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   160 160
No Yes TargetDB (Targets)   5 5
No Yes The Salmonella enterica Pan-genome (meta-genome)   32 32

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]