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  Home > Genomes > Callithrix jacchus 76_3.2.1 > Ubiquitin-like domains


Ubiquitin-like superfamily domain assignments
in
Callithrix jacchus 76_3.2.1

Assignment details

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Callithrix jacchus 76_3.2.1 has 431 significant domains in 403 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000000320   0.000000000455   104-169   Ras-binding domain, RBD  
ENSCJAP00000000334   0.00000000031   130-195   Ras-binding domain, RBD  
ENSCJAP00000000533   5.86e-17   10-124   Ras-binding domain, RBD  
ENSCJAP00000000540   0.000000313   144-201   Ras-binding domain, RBD  
ENSCJAP00000000779   6.72e-40   106-260   Ras-binding domain, RBD  
ENSCJAP00000000790   6.72e-40   106-260   Ras-binding domain, RBD  
ENSCJAP00000002140   4.96e-21   10-104   Ubiquitin-related  
ENSCJAP00000002315   0.00000000193   2-82   Ubiquitin-related  
ENSCJAP00000002320   0.0000000017   2-82   Ubiquitin-related  
ENSCJAP00000002451   1.55e-30   136-240   Ras-binding domain, RBD  
ENSCJAP00000002456   1.78e-30   236-340   Ras-binding domain, RBD  
ENSCJAP00000002475   0.00000388   609-688   Ras-binding domain, RBD  
ENSCJAP00000002582   7.23e-26   2-87   First domain of FERM  
ENSCJAP00000002590   3.31e-26   2-87   First domain of FERM  
ENSCJAP00000002837   0.000000672   5-80   Ubiquitin-related  
ENSCJAP00000002844   0.0000015   6-80   Ubiquitin-related  
ENSCJAP00000003382   0.0000000000000137   352-434   Ras-binding domain, RBD  
  0.0111   254-299   Ras-binding domain, RBD  
ENSCJAP00000003385   0.0000000000000147   388-470   Ras-binding domain, RBD  
  0.0119   290-335   Ras-binding domain, RBD  
ENSCJAP00000003389   0.000000000000015   398-480   Ras-binding domain, RBD  
  0.0121   300-345   Ras-binding domain, RBD  
ENSCJAP00000004132   2.94e-52   117-296   Ras-binding domain, RBD  
ENSCJAP00000004437   2.99e-18   1-94   Ubiquitin-related  
ENSCJAP00000004549   1.3e-21   2-67   First domain of FERM  
ENSCJAP00000005520   5.41e-21   10-104   Ubiquitin-related  
ENSCJAP00000005522   4.96e-21   10-104   Ubiquitin-related  
ENSCJAP00000005831   4.55e-26   203-282   First domain of FERM  
ENSCJAP00000005837   1.14e-27   1-81   First domain of FERM  
ENSCJAP00000006129   1.54e-17   1-82   Ubiquitin-related  
ENSCJAP00000006514   2.07e-26   32-113   First domain of FERM  
ENSCJAP00000006518   7.44e-21   6-69   First domain of FERM  
ENSCJAP00000006608   5.51e-24   26-107   Ubiquitin-related  
ENSCJAP00000006624   5.95e-24   26-107   Ubiquitin-related  
ENSCJAP00000006834   2.48e-26   20-104   First domain of FERM  
ENSCJAP00000006842   7.23e-26   4-85   First domain of FERM  
ENSCJAP00000006848   7.23e-26   4-85   First domain of FERM  
ENSCJAP00000006851   0.00000992   4-53   First domain of FERM  
ENSCJAP00000007326   8.78e-17   11-82   UBX domain  
  0.000000000000023   288-378   UBX domain  
  0.0204   78-124   UBX domain  
ENSCJAP00000007406   1.45e-39   31-130   First domain of FERM  
ENSCJAP00000007444   1.34e-39   31-130   First domain of FERM  
ENSCJAP00000007448   1.45e-39   52-151   First domain of FERM  
ENSCJAP00000007858   0.000000737   81-137   Ubiquitin-related  
ENSCJAP00000008102   1.33e-73   5-120   GABARAP-like  
ENSCJAP00000008148   6.2e-23   42-122   First domain of FERM  
ENSCJAP00000008160   6.68e-21   3-84   Ubiquitin-related  
ENSCJAP00000008169   4.37e-19   19-100   Ubiquitin-related  
ENSCJAP00000008181   0.00000353   760-822   Ubiquitin-related  
ENSCJAP00000008191   0.00000353   759-821   Ubiquitin-related  
ENSCJAP00000008766   3.53e-21   9-94   Ubiquitin-related  
ENSCJAP00000009094   5.06e-40   14-97   Ubiquitin-related  
ENSCJAP00000009096   2.12e-31   4-98   Ubiquitin-related  
ENSCJAP00000009378   0.0000000031   132-217   Ras-binding domain, RBD  
ENSCJAP00000009391   0.00000000491   206-291   Ras-binding domain, RBD  
ENSCJAP00000009719   2.71e-40   610-705   Ras-binding domain, RBD  
ENSCJAP00000009722   2.84e-40   637-732   Ras-binding domain, RBD  
ENSCJAP00000009795   0.0000176   731-812   Ras-binding domain, RBD  
ENSCJAP00000009796   1.03e-32   315-414   Ras-binding domain, RBD  
ENSCJAP00000009801   0.00000723   357-438   Ras-binding domain, RBD  
ENSCJAP00000009806   0.0000194   791-872   Ras-binding domain, RBD  
ENSCJAP00000009823   4.48e-30   96-197   Ras-binding domain, RBD  
ENSCJAP00000009832   1.41e-29   316-417   Ras-binding domain, RBD  
ENSCJAP00000009833   2.48e-32   315-414   Ras-binding domain, RBD  
ENSCJAP00000009837   9.61e-19   2-78   DIX domain  
ENSCJAP00000010038   0.00000000000106   23-107   Ubiquitin-related  
ENSCJAP00000010040   0.000000000000833   23-110   Ubiquitin-related  
ENSCJAP00000010415   9.3e-41   748-842   Ras-binding domain, RBD  
ENSCJAP00000010435   1.06e-39   603-697   Ras-binding domain, RBD  
ENSCJAP00000010449   1.06e-39   602-696   Ras-binding domain, RBD  
ENSCJAP00000010968   4.24e-17   482-575   First domain of FERM  
ENSCJAP00000010985   4.55e-17   482-575   First domain of FERM  
ENSCJAP00000011015   4.86e-17   572-665   First domain of FERM  
ENSCJAP00000011029   4.65e-17   476-569   First domain of FERM  
ENSCJAP00000011131   1.84e-29   19-111   Ras-binding domain, RBD  
ENSCJAP00000011133   4.82e-30   28-124   Ras-binding domain, RBD  
ENSCJAP00000011210   0.0000000424   961-1016   Ubiquitin-related  
ENSCJAP00000011214   2.93e-26   1-72   Ubiquitin-related  
ENSCJAP00000011221   6.82e-17   2-64   First domain of FERM  
ENSCJAP00000011233   3.93e-21   46-126   First domain of FERM  
ENSCJAP00000011241   0.00000004   949-1004   Ubiquitin-related  
ENSCJAP00000011277   2.12e-23   1-91   Ubiquitin-related  
ENSCJAP00000011278   0.000000000000204   338-418   Ubiquitin-related  
  0.0000000000579   256-334   Ubiquitin-related  
ENSCJAP00000011281   0.000000000000198   328-408   Ubiquitin-related  
  0.0000000000548   246-324   Ubiquitin-related  
ENSCJAP00000011636   0.00000065   146-217   UBX domain  
ENSCJAP00000011776   0.0000065   146-217   UBX domain  
ENSCJAP00000011789   0.00000679   146-217   UBX domain  
ENSCJAP00000012023   1.12e-20   1-83   First domain of FERM  
ENSCJAP00000012730   2.65e-29   1-77   Ubiquitin-related  
ENSCJAP00000012753   0.0000000000000367   149-198   Ras-binding domain, RBD  
ENSCJAP00000012773   1.58e-33   138-240   Ras-binding domain, RBD  
  3.79e-20   82-151   Ras-binding domain, RBD  
ENSCJAP00000012793   4.13e-33   358-460   Ras-binding domain, RBD  
  8.96e-20   302-371   Ras-binding domain, RBD  
ENSCJAP00000012796   3.17e-31   366-456   Ras-binding domain, RBD  
  8.96e-20   310-379   Ras-binding domain, RBD  
ENSCJAP00000012802   0.00000000000000207   16-118   First domain of FERM  
ENSCJAP00000012970   6.72e-26   100-179   First domain of FERM  
ENSCJAP00000013459   0.000000672   229-353   Ras-binding domain, RBD  
ENSCJAP00000013467   0.000000672   229-353   Ras-binding domain, RBD  
ENSCJAP00000013716   9.82e-21   314-444   UBX domain  
ENSCJAP00000013760   1.95e-16   337-422   Ubiquitin-related  
ENSCJAP00000013840   3.1e-17   305-406   UBX domain  
ENSCJAP00000013843   3.1e-17   307-408   UBX domain  
ENSCJAP00000013863   9.71e-34   170-269   Ras-binding domain, RBD  
ENSCJAP00000013880   4.13e-33   170-269   Ras-binding domain, RBD  
ENSCJAP00000013885   4.13e-33   169-268   Ras-binding domain, RBD  
ENSCJAP00000013893   1.72e-32   169-262   Ras-binding domain, RBD  
ENSCJAP00000013894   7.76e-65   1-76   Ubiquitin-related  
ENSCJAP00000014137   8.27e-27   16-96   First domain of FERM  
ENSCJAP00000014234   1.41e-23   132-245   UBX domain  
ENSCJAP00000014239   1.43e-23   133-246   UBX domain  
ENSCJAP00000014289   1.07e-36   490-592   Ras-binding domain, RBD  
ENSCJAP00000014315   1.1e-36   508-610   Ras-binding domain, RBD  
ENSCJAP00000014317   1.1e-36   508-610   Ras-binding domain, RBD  
ENSCJAP00000014324   1.34e-36   640-742   Ras-binding domain, RBD  
ENSCJAP00000014476   1.01e-20   9-92   Ubiquitin-related  
ENSCJAP00000014487   1.36e-20   10-92   Ubiquitin-related  
ENSCJAP00000014525   0.000000193   275-342   Ubiquitin-related  
ENSCJAP00000014539   0.000000186   275-342   Ubiquitin-related  
ENSCJAP00000014588   0.0000015   316-384   Ubiquitin-related  
ENSCJAP00000014596   0.00000161   257-325   Ubiquitin-related  
ENSCJAP00000014613   0.00000177   313-381   Ubiquitin-related  
ENSCJAP00000014640   0.0000018   316-384   Ubiquitin-related  
ENSCJAP00000014938   0.00000000000000173   151-236   Ubiquitin-related  
ENSCJAP00000015070   1.76e-23   1-82   Ras-binding domain, RBD  
ENSCJAP00000015895   1.55e-17   4-85   Ubiquitin-related  
ENSCJAP00000015898   3.06e-17   4-85   Ubiquitin-related  
ENSCJAP00000015900   6.12e-17   4-85   Ubiquitin-related  
ENSCJAP00000015965   5.58e-26   246-328   UBX domain  
ENSCJAP00000016367   2.48e-31   98-192   Ras-binding domain, RBD  
ENSCJAP00000017244   3.45e-22   3-89   First domain of FERM  
ENSCJAP00000017250   5.68e-22   3-89   First domain of FERM  
ENSCJAP00000017258   3.1e-22   34-120   First domain of FERM  
ENSCJAP00000017458   0.000000101   18-112   Ras-binding domain, RBD  
ENSCJAP00000017507   4.18e-37   2-140   Ras-binding domain, RBD  
ENSCJAP00000017709   5.04e-26   9-92   Ubiquitin-related  
ENSCJAP00000017884   0.0000000000000446   367-469   UBX domain  
ENSCJAP00000018096   0.00000183   79-136   First domain of FERM  
ENSCJAP00000018258   6.89e-26   210-290   First domain of FERM  
ENSCJAP00000018259   2.07e-27   1-81   First domain of FERM  
ENSCJAP00000018263   0.00000248   1-46   First domain of FERM  
ENSCJAP00000018265   7.03e-26   1-81   First domain of FERM  
ENSCJAP00000018268   8.96e-26   210-290   First domain of FERM  
ENSCJAP00000018287   8.1e-26   207-287   First domain of FERM  
ENSCJAP00000018300   6.2e-26   1-81   First domain of FERM  
ENSCJAP00000018460   8.29e-70   1-91   Ubiquitin-related  
ENSCJAP00000018749   3.15e-22   169-255   Ubiquitin-related  
ENSCJAP00000018754   2.7e-22   149-235   Ubiquitin-related  
ENSCJAP00000018891   2.62e-24   25-116   Ras-binding domain, RBD  
ENSCJAP00000019051   3.51e-26   2-87   First domain of FERM  
ENSCJAP00000019135   3.51e-26   2-87   First domain of FERM  
ENSCJAP00000019142   5.58e-26   3-87   First domain of FERM  
ENSCJAP00000019170   1.98e-27   670-779   Ubiquitin-related  
ENSCJAP00000019179   2.03e-27   682-791   Ubiquitin-related  
ENSCJAP00000019226   0.000000000272   160-239   Ras-binding domain, RBD  
ENSCJAP00000019230   0.000000000272   162-241   Ras-binding domain, RBD  
ENSCJAP00000019420   4.58e-30   8-92   Ubiquitin-related  
ENSCJAP00000019484   0.0000000000241   180-261   Ras-binding domain, RBD  
ENSCJAP00000019491   0.0000000000226   9-90   Ras-binding domain, RBD  
ENSCJAP00000019528   0.0000753   702-764   Ubiquitin-related  
ENSCJAP00000019571   0.0000000000000134   2-69   Ubiquitin-related  
ENSCJAP00000019646   0.00000000000124   1898-2006   Ras-binding domain, RBD  
  0.00000000000603   1250-1352   Ubiquitin-related  
ENSCJAP00000020044   3.2e-22   389-467   DIX domain  
ENSCJAP00000020095   5.58e-22   600-678   DIX domain  
ENSCJAP00000020505   1.24e-28   160-253   Ras-binding domain, RBD  
ENSCJAP00000020517   1.39e-28   160-253   Ras-binding domain, RBD  
ENSCJAP00000021002   5.51e-20   77-157   Ubiquitin-related  
  2.16e-17   5-76   Ubiquitin-related  
ENSCJAP00000021255   1.98e-27   36-132   Ubiquitin-related  
ENSCJAP00000021404   2.3e-18   1-80   Ubiquitin-related  
ENSCJAP00000021708   6.2e-24   790-871   DIX domain  
ENSCJAP00000021718   6.72e-27   747-828   DIX domain  
ENSCJAP00000021778   4.13e-26   257-395   UBX domain  
ENSCJAP00000021789   4.13e-26   257-395   UBX domain  
ENSCJAP00000022332   4.96e-28   8-90   Ras-binding domain, RBD  
ENSCJAP00000022484   1.36e-21   10-94   Ubiquitin-related  
ENSCJAP00000022625   2.16e-19   2-79   Ubiquitin-related  
ENSCJAP00000022687   8.52e-22   5-89   Ubiquitin-related  
ENSCJAP00000022736   2.16e-18   5-76   Ubiquitin-related  
ENSCJAP00000022747   0.00000536   5-61   Ubiquitin-related  
ENSCJAP00000022769   6.68e-23   5-90   Ubiquitin-related  
ENSCJAP00000022795   2.48e-22   149-240   UBX domain  
ENSCJAP00000022807   2.48e-22   148-239   UBX domain  
ENSCJAP00000022829   1.65e-23   20-90   Ras-binding domain, RBD  
ENSCJAP00000022880   1.34e-22   20-90   Ras-binding domain, RBD  
ENSCJAP00000024367   2.24e-22   27-111   First domain of FERM  
ENSCJAP00000024433   1.65e-24   40-123   First domain of FERM  
ENSCJAP00000024449   2.58e-24   40-123   First domain of FERM  
ENSCJAP00000024460   1.55e-23   40-125   First domain of FERM  
ENSCJAP00000024511   1.03e-20   3-89   First domain of FERM  
ENSCJAP00000024519   1.26e-20   57-143   First domain of FERM  
ENSCJAP00000024527   1.89e-21   160-246   First domain of FERM  
ENSCJAP00000024572   1.76e-46   107-299   Ras-binding domain, RBD  
ENSCJAP00000024968   1.7e-24   153-225   Ras-binding domain, RBD  
ENSCJAP00000025024   7.12e-25   400-506   Ubiquitin-related  
  0.00000668   352-425   Ubiquitin-related  
ENSCJAP00000025060   0.0000000000000189   343-432   First domain of FERM  
ENSCJAP00000025453   0.0000278   38-98   Ubiquitin-related  
ENSCJAP00000025646   0.0000000428   214-280   Ras-binding domain, RBD  
ENSCJAP00000025844   5.79e-22   1026-1106   Ras-binding domain, RBD  
  0.00000000062   954-1007   Ras-binding domain, RBD  
ENSCJAP00000026216   9.68e-79   1-116   GABARAP-like  
ENSCJAP00000026777   5.47e-23   1-74   Ubiquitin-related  
ENSCJAP00000026911   1.45e-21   3-83   First domain of FERM  
ENSCJAP00000027048   0.00000134   145-212   UBX domain  
ENSCJAP00000027110   0.000000482   108-183   Ras-binding domain, RBD  
ENSCJAP00000027116   9.76e-29   212-312   Ras-binding domain, RBD  
  7.58e-23   4-104   Ras-binding domain, RBD  
ENSCJAP00000027122   1.08e-28   199-299   Ras-binding domain, RBD  
  8.27e-24   4-105   Ras-binding domain, RBD  
ENSCJAP00000027144   3.93e-16   53-147   First domain of FERM  
ENSCJAP00000027490   0.0000000269   558-602   Ras-binding domain, RBD  
ENSCJAP00000027568   5.79e-27   511-612   Ras-binding domain, RBD  
ENSCJAP00000027859   1.17e-19   1255-1357   First domain of FERM  
  0.00000000000000142   1893-2001   First domain of FERM  
ENSCJAP00000027861   6.05e-20   369-471   First domain of FERM  
  5.79e-16   1007-1115   First domain of FERM  
ENSCJAP00000027875   6.5e-20   463-565   First domain of FERM  
  6.41e-16   1064-1172   First domain of FERM  
ENSCJAP00000028261   3.68e-30   2-105   Ubiquitin-related  
ENSCJAP00000028431   5.37e-20   18-104   First domain of FERM  
ENSCJAP00000028980   1.78e-36   2135-2246   Ras-binding domain, RBD  
  1.03e-31   2009-2115   Ras-binding domain, RBD  
ENSCJAP00000028993   1.78e-36   2135-2246   Ras-binding domain, RBD  
  1.03e-31   2009-2115   Ras-binding domain, RBD  
ENSCJAP00000029028   2.76e-27   110-190   First domain of FERM  
ENSCJAP00000029040   2.07e-27   110-190   First domain of FERM  
ENSCJAP00000029070   0.0000000016   58-150   Ubiquitin-related  
ENSCJAP00000029215   0.00000000414   704-796   Ubiquitin-related  
ENSCJAP00000029531   9.3e-34   101-209   Ras-binding domain, RBD  
ENSCJAP00000029537   1.36e-21   10-94   Ubiquitin-related  
ENSCJAP00000029542   1.65e-33   297-405   Ras-binding domain, RBD  
ENSCJAP00000029897   3.46e-52   145-321   Ras-binding domain, RBD  
ENSCJAP00000030215   0.0000143   10-59   First domain of FERM  
ENSCJAP00000030659   1.17e-74   1-116   GABARAP-like  
ENSCJAP00000030726   1.76e-24   12-91   DIX domain  
ENSCJAP00000030767   4.14e-20   130-219   Ubiquitin-related  
ENSCJAP00000030803   0.0000000000114   56-134   Ras-binding domain, RBD  
ENSCJAP00000030836   2.25e-26   100-186   APG12-like  
ENSCJAP00000030885   1.81e-33   327-485   Ras-binding domain, RBD  
ENSCJAP00000030923   1.13e-20   1-73   Ubiquitin-related  
ENSCJAP00000031175   2.16e-23   1-91   Ubiquitin-related  
ENSCJAP00000031262   0.00000000000000276   38-92   Ubiquitin-related  
ENSCJAP00000031662   4.55e-20   2-63   First domain of FERM  
ENSCJAP00000031684   7.23e-25   2-83   Ras-binding domain, RBD  
ENSCJAP00000031708   5.17e-37   11-126   GABARAP-like  
ENSCJAP00000031819   1.6e-19   27-112   First domain of FERM  
ENSCJAP00000031913   8.06e-18   21-106   First domain of FERM  
ENSCJAP00000032102   2.76e-19   14-110   Ubiquitin-related  
ENSCJAP00000032107   2.76e-19   1-97   Ubiquitin-related  
ENSCJAP00000032109   2.76e-19   1-97   Ubiquitin-related  
ENSCJAP00000032118   0.0000000000965   126-199   Ubiquitin-related  
ENSCJAP00000032127   0.0000000000989   124-197   Ubiquitin-related  
ENSCJAP00000032153   6.82e-27   99-178   First domain of FERM  
ENSCJAP00000032167   7.85e-27   99-178   First domain of FERM  
ENSCJAP00000032254   0.000000155   762-801   DIX domain  
ENSCJAP00000032289   0.00000837   762-798   DIX domain  
ENSCJAP00000032478   1.28e-29   1-77   Ubiquitin-related  
ENSCJAP00000032694   1.41e-20   1-83   First domain of FERM  
ENSCJAP00000032842   0.0000000000000015   38-92   Ubiquitin-related  
ENSCJAP00000033043   5.86e-30   39-103   BM-002-like  
ENSCJAP00000033046   3.36e-41   2-85   BM-002-like  
ENSCJAP00000033291   9.69e-41   776-870   Ras-binding domain, RBD  
ENSCJAP00000033336   2.43e-21   440-527   Ubiquitin-related  
ENSCJAP00000033534   1.63e-24   347-450   UBX domain  
ENSCJAP00000033555   0.0000315   793-856   Ras-binding domain, RBD  
ENSCJAP00000033599   0.0000434   1133-1196   Ras-binding domain, RBD  
ENSCJAP00000033652   3.88e-42   6-120   GABARAP-like  
ENSCJAP00000033659   4.39e-39   9-123   GABARAP-like  
ENSCJAP00000033665   0.0000147   189-265   APG12-like  
ENSCJAP00000033682   0.0000269   226-301   APG12-like  
ENSCJAP00000033685   0.0000331   265-340   APG12-like  
ENSCJAP00000033732   6.54e-25   11-84   UBX domain  
  3.62e-17   364-452   UBX domain  
  0.0124   83-125   Ubiquitin-related  
ENSCJAP00000033742   2.7e-27   11-84   UBX domain  
  2.23e-22   364-462   UBX domain  
  0.00995   83-125   Ubiquitin-related  
ENSCJAP00000034008   8.27e-24   62-163   Ras-binding domain, RBD  
ENSCJAP00000034210   0.00000000041   38-130   Ubiquitin-related  
ENSCJAP00000034677   0.0000000439   135-209   Ras-binding domain, RBD  
ENSCJAP00000034680   0.0000000853   285-359   Ras-binding domain, RBD  
ENSCJAP00000034688   0.0000000982   287-361   Ras-binding domain, RBD  
ENSCJAP00000034811   0.00000000173   4-71   Ubiquitin-related  
ENSCJAP00000034888   6.98e-22   153-284   UBX domain  
ENSCJAP00000034896   4.91e-27   153-294   UBX domain  
ENSCJAP00000035389   2.53e-20   4-80   Ubiquitin-related  
ENSCJAP00000035400   0.0000000136   85-149   Ubiquitin-related  
ENSCJAP00000035755   2.43e-16   83-201   Ubiquitin-related  
ENSCJAP00000036106   0.0000000000000023   38-92   Ubiquitin-related  
ENSCJAP00000036248   6.48e-29   4-107   Ubiquitin-related  
ENSCJAP00000036475   6.2e-34   37-137   First domain of FERM  
ENSCJAP00000036488   6.2e-34   37-137   First domain of FERM  
ENSCJAP00000036919   3.72e-20   1-67   First domain of FERM  
ENSCJAP00000036939   2.48e-25   19-103   First domain of FERM  
ENSCJAP00000036950   3.72e-20   19-87   First domain of FERM  
ENSCJAP00000036954   2.48e-25   19-103   First domain of FERM  
ENSCJAP00000037366   2.16e-23   1-91   Ubiquitin-related  
ENSCJAP00000037522   2.23e-23   15-96   Ubiquitin-related  
ENSCJAP00000037814   1.46e-21   105-201   Ubiquitin-related  
ENSCJAP00000037817   1.52e-21   97-193   Ubiquitin-related  
ENSCJAP00000037930   1.43e-21   69-162   Ubiquitin-related  
ENSCJAP00000038043   1.04e-24   2-92   Ubiquitin-related  
ENSCJAP00000038314   3.91e-21   24-109   Ubiquitin-related  
ENSCJAP00000038775   0.000000000626   15-88   Ubiquitin-related  
ENSCJAP00000038778   0.0000000000871   50-130   Ubiquitin-related  
ENSCJAP00000038780   0.0000000000289   50-130   Ubiquitin-related  
ENSCJAP00000038923   7.75e-34   222-337   UBX domain  
ENSCJAP00000038933   9.3e-34   253-368   UBX domain  
ENSCJAP00000038938   1.05e-33   255-370   UBX domain  
ENSCJAP00000039566   0.00000217   192-249   Ras-binding domain, RBD  
ENSCJAP00000039568   0.00000217   192-249   Ras-binding domain, RBD  
ENSCJAP00000039722   9.88e-20   3-82   Ubiquitin-related  
ENSCJAP00000039830   6.91e-35   12-88   Ubiquitin-related  
  7.88e-35   315-392   Ubiquitin-related  
  1.31e-34   88-164   Ubiquitin-related  
  1.31e-34   164-240   Ubiquitin-related  
  1.31e-34   240-316   Ubiquitin-related  
ENSCJAP00000039926   0.0000000231   237-300   Ubiquitin-related  
ENSCJAP00000039927   0.0000000157   236-300   Ubiquitin-related  
ENSCJAP00000039928   0.0000000159   237-301   Ubiquitin-related  
ENSCJAP00000040133   7.23e-30   290-406   UBX domain  
ENSCJAP00000040134   1.52e-30   375-491   UBX domain  
  0.0000000106   83-170   Ubiquitin-related  
ENSCJAP00000040136   2.86e-30   535-651   UBX domain  
  0.0000000155   91-179   Ubiquitin-related  
  0.000000691   192-260   Ubiquitin-related  
ENSCJAP00000040334   2.25e-36   1-97   GABARAP-like  
ENSCJAP00000040335   3.88e-44   1-116   GABARAP-like  
ENSCJAP00000040351   1.94e-33   646-734   Ras-binding domain, RBD  
ENSCJAP00000040354   1.94e-33   646-734   Ras-binding domain, RBD  
ENSCJAP00000040673   1.25e-18   4-88   Ubiquitin-related  
ENSCJAP00000040779   5.99e-30   1-105   Ubiquitin-related  
ENSCJAP00000040780   2.96e-35   1-77   Ubiquitin-related  
ENSCJAP00000040968   4.02e-35   1-93   Ubiquitin-related  
ENSCJAP00000040993   4.96e-34   1-93   Ubiquitin-related  
ENSCJAP00000041400   8.29e-70   1-91   Ubiquitin-related  
ENSCJAP00000041757   0.00000000000157   185-269   UBX domain  
ENSCJAP00000041893   2.12e-35   1-93   Ubiquitin-related  
ENSCJAP00000041904   1.06e-20   81-166   Ubiquitin-related  
ENSCJAP00000042414   2.85e-21   491-578   Ubiquitin-related  
ENSCJAP00000042454   5.06e-40   14-97   Ubiquitin-related  
ENSCJAP00000042456   0.0000000000000015   38-92   Ubiquitin-related  
ENSCJAP00000042878   4.13e-28   8-90   Ras-binding domain, RBD  
ENSCJAP00000042938   0.0000000000353   1-67   Ubiquitin-related  
ENSCJAP00000043017   0.000000186   250-317   Ubiquitin-related  
ENSCJAP00000043097   5.63e-21   10-104   Ubiquitin-related  
ENSCJAP00000043224   0.000000000272   160-239   Ras-binding domain, RBD  
ENSCJAP00000043467   0.0000916   614-676   Ubiquitin-related  
ENSCJAP00000043493   1.19e-28   103-196   Ras-binding domain, RBD  
ENSCJAP00000043518   8.52e-21   1-91   Ubiquitin-related  
ENSCJAP00000044052   8.78e-42   357-520   Ras-binding domain, RBD  
ENSCJAP00000044089   9.64e-37   441-543   Ras-binding domain, RBD  
ENSCJAP00000044133   1.58e-19   27-112   First domain of FERM  
ENSCJAP00000044207   0.0000000000000172   318-407   First domain of FERM  
ENSCJAP00000044257   0.000000672   229-353   Ras-binding domain, RBD  
ENSCJAP00000044389   0.0000000000000015   38-92   Ubiquitin-related  
ENSCJAP00000044716   0.0000000011   51-136   Ras-binding domain, RBD  
ENSCJAP00000044718   7.13e-27   783-864   DIX domain  
ENSCJAP00000044775   3e-27   199-300   Ras-binding domain, RBD  
ENSCJAP00000044846   0.0000000000000248   247-349   UBX domain  
ENSCJAP00000045060   3.1e-24   62-163   Ras-binding domain, RBD  
ENSCJAP00000045202   1.43e-21   69-162   Ubiquitin-related  
ENSCJAP00000045486   9.01e-31   1-86   Ubiquitin-related  
ENSCJAP00000045498   0.0000000000000125   178-280   UBX domain  
ENSCJAP00000045510   0.0000031   36-80   First domain of FERM  
ENSCJAP00000045649   5.79e-28   1-81   First domain of FERM  
ENSCJAP00000045859   8.92e-41   722-816   Ras-binding domain, RBD  
ENSCJAP00000046087   3.67e-28   8-107   Ubiquitin-related  
ENSCJAP00000046142   1.45e-19   27-112   First domain of FERM  
ENSCJAP00000046395   2.97e-40   674-769   Ras-binding domain, RBD  
ENSCJAP00000046495   0.000000000282   196-275   Ras-binding domain, RBD  
ENSCJAP00000046499   0.00000517   142-193   UBX domain  
ENSCJAP00000046647   8.29e-70   1-91   Ubiquitin-related  
ENSCJAP00000046710   2.27e-25   19-103   First domain of FERM  
ENSCJAP00000046864   5.79e-27   510-611   Ras-binding domain, RBD  
ENSCJAP00000046890   0.00000000000465   13-72   Ras-binding domain, RBD  
ENSCJAP00000047050   0.000000155   181-248   Ubiquitin-related  
ENSCJAP00000047079   1.07e-40   848-942   Ras-binding domain, RBD  
ENSCJAP00000047128   9.69e-41   775-869   Ras-binding domain, RBD  
ENSCJAP00000047256   0.000000134   696-735   DIX domain  
ENSCJAP00000047296   4.13e-28   10-92   Ras-binding domain, RBD  
ENSCJAP00000047322   5.17e-44   145-301   Ras-binding domain, RBD  
ENSCJAP00000047509   4.37e-21   8-74   Ubiquitin-related  
ENSCJAP00000047742   3.31e-31   98-192   Ras-binding domain, RBD  
ENSCJAP00000048006   2.14e-21   22-79   Ubiquitin-related  
ENSCJAP00000048195   6.61e-27   36-115   First domain of FERM  
ENSCJAP00000048207   6.53e-30   1-91   Ubiquitin-related  
ENSCJAP00000048356   1.66e-27   582-691   Ubiquitin-related  
ENSCJAP00000048400   6.61e-17   2-64   First domain of FERM  
ENSCJAP00000048429   1.52e-21   97-193   Ubiquitin-related  
ENSCJAP00000048665   2.58e-22   155-246   UBX domain  
ENSCJAP00000048706   1.27e-32   1-94   Ubiquitin-related  
ENSCJAP00000048723   4.31e-17   52-146   First domain of FERM  
ENSCJAP00000048736   2.59e-26   3-73   Ubiquitin-related  
ENSCJAP00000048788   3.73e-35   152-228   Ubiquitin-related  
  4.77e-35   76-152   Ubiquitin-related  
  1.16e-34   1-76   Ubiquitin-related  
ENSCJAP00000049488   3.31e-31   98-192   Ras-binding domain, RBD  
ENSCJAP00000049504   0.000000496   342-390   First domain of FERM  
ENSCJAP00000049640   2.07e-27   110-190   First domain of FERM  
ENSCJAP00000049747   2.84e-40   639-734   Ras-binding domain, RBD  
ENSCJAP00000049774   9.56e-41   763-857   Ras-binding domain, RBD  
ENSCJAP00000049809   1.41e-22   2-80   Ubiquitin-related  
ENSCJAP00000049842   0.000000000259   124-197   Ubiquitin-related  
ENSCJAP00000049847   4.24e-34   142-257   UBX domain  
ENSCJAP00000049913   6.32e-46   1-116   GABARAP-like  
ENSCJAP00000050070   2.76e-19   1-97   Ubiquitin-related  
ENSCJAP00000050189   2.7e-22   149-235   Ubiquitin-related  
ENSCJAP00000050249   2.76e-19   14-110   Ubiquitin-related  
ENSCJAP00000050260   5.58e-26   19-103   First domain of FERM  
ENSCJAP00000050347   0.0000000000000189   342-431   First domain of FERM  
ENSCJAP00000050380   0.0000000000000383   367-469   UBX domain  
ENSCJAP00000050384   1.63e-27   56-197   UBX domain  
ENSCJAP00000050554   0.000000568   229-353   Ras-binding domain, RBD  
ENSCJAP00000050783   1.1e-36   517-619   Ras-binding domain, RBD  
ENSCJAP00000050956   3.31e-31   98-192   Ras-binding domain, RBD  
ENSCJAP00000050961   0.000000000000029   334-436   UBX domain  
ENSCJAP00000050976   0.000000000276   173-252   Ras-binding domain, RBD  
ENSCJAP00000050979   5.37e-27   40-119   First domain of FERM  
ENSCJAP00000050987   2.07e-42   357-520   Ras-binding domain, RBD  
ENSCJAP00000051040   0.00000118   2-60   Ubiquitin-related  
ENSCJAP00000051469   3.1e-38   766-861   Ras-binding domain, RBD  
ENSCJAP00000051693   4.55e-28   8-90   Ras-binding domain, RBD  
ENSCJAP00000051727   3.72e-31   120-214   Ras-binding domain, RBD  
ENSCJAP00000051869   8.29e-21   1-73   Ubiquitin-related  
ENSCJAP00000051899   1.96e-26   19-103   First domain of FERM  
ENSCJAP00000051966   1.68e-20   1-91   Ubiquitin-related  
ENSCJAP00000052152   4.13e-33   234-336   Ras-binding domain, RBD  
ENSCJAP00000052291   2.07e-25   2-81   First domain of FERM  
ENSCJAP00000052363   1.11e-27   1-114   GABARAP-like  
ENSCJAP00000052405   7.49e-27   1-113   GABARAP-like  
 
Weak hits:
ENSCJAP00000001738   0.00212   87-181   Ubiquitin-related  
ENSCJAP00000001920   0.000474   645-704   Ubiquitin-related  
ENSCJAP00000003559   0.00235   148-220   Ubiquitin-related  
ENSCJAP00000003563   0.00259   130-201   Ubiquitin-related  
ENSCJAP00000007073   0.0258   152-221   Ubiquitin-related  
ENSCJAP00000007372   0.0744   882-964   Ubiquitin-related  
ENSCJAP00000011228   0.00155   910-952   Ubiquitin-related  
ENSCJAP00000011522   0.000273   48-95   Ubiquitin-related  
ENSCJAP00000013395   0.00887   16-92   Ubiquitin-related  
ENSCJAP00000013418   0.00887   16-92   Ubiquitin-related  
ENSCJAP00000013420   0.00887   16-92   Ubiquitin-related  
ENSCJAP00000016420   0.0424   770-808   Ras-binding domain, RBD  
ENSCJAP00000019632   0.000662   5-51   Ubiquitin-related  
ENSCJAP00000022042   0.0134   1058-1144   Ras-binding domain, RBD  
ENSCJAP00000022049   0.0134   1058-1144   Ras-binding domain, RBD  
ENSCJAP00000022066   0.021   1686-1772   Ras-binding domain, RBD  
ENSCJAP00000022071   0.0214   1701-1787   Ras-binding domain, RBD  
ENSCJAP00000024045   0.000548   2-28   DIX domain  
ENSCJAP00000024823   0.000289   400-492   Ras-binding domain, RBD  
ENSCJAP00000024842   0.000448   393-487   Ras-binding domain, RBD  
ENSCJAP00000024846   0.000448   401-495   Ras-binding domain, RBD  
ENSCJAP00000025114   0.001   136-220   Ubiquitin-related  
ENSCJAP00000025927   0.0293   310-382   Ubiquitin-related  
  0.0857   614-689   Ubiquitin-related  
ENSCJAP00000025948   0.0434   550-622   Ubiquitin-related  
ENSCJAP00000026485   0.000233   1118-1197   First domain of FERM  
ENSCJAP00000026582   0.000262   931-1010   First domain of FERM  
ENSCJAP00000026595   0.000233   1118-1197   First domain of FERM  
ENSCJAP00000026794   0.0002   752-831   Ras-binding domain, RBD  
ENSCJAP00000026831   0.000517   752-812   Ras-binding domain, RBD  
ENSCJAP00000026849   0.000207   752-831   Ras-binding domain, RBD  
ENSCJAP00000026880   0.000475   665-726   Ras-binding domain, RBD  
ENSCJAP00000026906   0.000142   1-49   Ubiquitin-related  
ENSCJAP00000027155   0.015   10-60   First domain of FERM  
ENSCJAP00000027174   0.000906   305-360   Ubiquitin-related  
ENSCJAP00000027320   0.0137   141-199   Ubiquitin-related  
ENSCJAP00000027803   0.0015   932-1016   Ras-binding domain, RBD  
ENSCJAP00000027819   0.00191   1185-1269   Ras-binding domain, RBD  
ENSCJAP00000028258   0.000775   994-1071   Ubiquitin-related  
ENSCJAP00000029283   0.000945   534-602   Ubiquitin-related  
ENSCJAP00000029288   0.000945   534-602   Ubiquitin-related  
ENSCJAP00000030805   0.000449   13-50   Ras-binding domain, RBD  
ENSCJAP00000031747   0.0579   312-385   Ubiquitin-related  
ENSCJAP00000031759   0.069   313-386   Ubiquitin-related  
ENSCJAP00000032130   0.00175   192-236   Ubiquitin-related  
ENSCJAP00000033681   0.00121   16-88   Ras-binding domain, RBD  
ENSCJAP00000038229   0.000204   78-140   Ubiquitin-related  
ENSCJAP00000038264   0.0247   120-161   Ubiquitin-related  
ENSCJAP00000039570   0.000207   120-159   Ras-binding domain, RBD  
ENSCJAP00000039666   0.00148   17-89   Ubiquitin-related  
ENSCJAP00000042197   0.000672   418-502   Ras-binding domain, RBD  
ENSCJAP00000043362   0.0022   287-334   Ras-binding domain, RBD  
ENSCJAP00000044958   0.0134   162-212   Ubiquitin-related  
ENSCJAP00000045507   0.0245   152-221   Ubiquitin-related  
ENSCJAP00000045674   0.000938   136-220   Ubiquitin-related  
ENSCJAP00000046581   0.0424   770-808   Ras-binding domain, RBD  
ENSCJAP00000047034   0.0031   112-206   Ubiquitin-related  
ENSCJAP00000047453   0.0002   136-220   Ubiquitin-related  
ENSCJAP00000048418   0.0283   389-461   Ubiquitin-related  
  0.0821   693-768   Ubiquitin-related  
ENSCJAP00000048849   0.00139   871-955   Ras-binding domain, RBD  
ENSCJAP00000049093   0.00155   170-214   Ubiquitin-related  
ENSCJAP00000049329   0.00093   577-661   Ras-binding domain, RBD  
ENSCJAP00000049943   0.00103   69-115   Ubiquitin-related  
ENSCJAP00000050928   0.00191   1178-1262   Ras-binding domain, RBD  
ENSCJAP00000051241   0.001   136-220   Ubiquitin-related  
ENSCJAP00000051409   0.000281   136-220   Ubiquitin-related  

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View all assignments containing a Ubiquitin-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   423065 423065
No Yes Homo sapiens 76_38 Human 941 853
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 201 181
No Yes Gorilla gorilla 76_3.1 Western gorilla 277 258
No Yes Pongo abelii 76_2 Sumatran orangutan 207 186
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 216 197
No Yes Papio anubis 76 Olive baboon 232 212
No Yes Macaca mulatta 76_1 Rhesus monkey 351 315
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 431 403
No Yes Otolemur garnettii 76_3 Small-eared galago 209 192
No Yes Microcebus murinus 76_1 Gray mouse lemur 136 126
No Yes Rattus norvegicus 76_5.0 Norway rat 253 228
No Yes Mus musculus 76_38 House mouse 521 464
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 148 136
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 187 175
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 197 185
No Yes Cavia porcellus 76_3 Domestic guinea pig 192 181
No Yes Oryctolagus cuniculus 76_2 Rabbit 206 194
No Yes Ochotona princeps 76 American pika 138 126
No Yes Tupaia belangeri 76 Northern tree shrew 123 117
No Yes Sus scrofa 76_10.2 Pig 226 206
No Yes Bos taurus 76_3.1 Cattle 226 205
No Yes Ovis aries 76_3.1 Sheep 219 198
No Yes Vicugna pacos 76_1 Alpaca 99 94
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 177 160
No Yes Mustela putorius furo 76_1.0 Domestic ferret 193 178
No Yes Ailuropoda melanoleuca 76_1 Giant panda 212 199
No Yes Canis familiaris 76_3.1 Dog 254 232
No Yes Felis catus 76_6.2 Domestic cat 201 189
No Yes Equus caballus 76_2 Horse 246 224
No Yes Myotis lucifugus 76_2.0 Little brown bat 208 194
No Yes Pteropus vampyrus 76_1 Large flying fox 177 162
No Yes Sorex araneus 76_1 European shrew 116 113
No Yes Erinaceus europaeus 76 Western European hedgehog 113 110
No Yes Procavia capensis 76_1 Cape rock hyrax 140 125
No Yes Loxodonta africana 76_3 African savanna elephant 255 237
No Yes Echinops telfairi 76 Small Madagascar hedgehog 139 134
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 332 315
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 110 104
No Yes Macropus eugenii 76_1.0 Tammar wallaby 155 142
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 224 203
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 211 190
No Yes Ornithorhynchus anatinus 76_5 Platypus 162 147
No Yes Saccoglossus kowalevskii v3.0   377 346
No Yes Petromyzon marinus 76_7.0 Sea lamprey 102 91
No Yes Meleagris gallopavo 76_2 Turkey 149 140
No Yes Gallus gallus 76_4 Chicken 161 148
No Yes Anas platyrhynchos 76_1.0 Mallard 157 143
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 163 147
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 161 145
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 184 168
No Yes Anolis carolinensis 76_2.0 Green anole 184 164
No Yes Xenopus laevis African clawed frog 405 358
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 219 200
No Yes Latimeria chalumnae 76_1 Coelacanth 222 209
No Yes Lepisosteus oculatus 76 Spotted gar 233 217
No Yes Gadus morhua 76_1 Atlantic cod 220 206
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 290 272
No Yes Takifugu rubripes 76_4 Torafugu 669 623
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 298 269
No Yes Oryzias latipes 76_1 Japanese medaka 263 241
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 236 222
No Yes Poecilia formosa 76 Amazon molly 244 228
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 310 293
No Yes Astyanax mexicanus 76 Mexican tetra 229 214
No Yes Danio rerio 76_9 Zebrafish 428 390
No Yes Oikopleura dioica   85 78
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 200 139
No Yes Ciona intestinalis 76 Vase tunicate 108 95
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 147 137
No Yes Adineta vaga   307 272
No Yes Octopus bimaculoides 280   142 126
No Yes Crassostrea gigas 22 Pacific oyster 115 102
No Yes Lottia gigantea Owl limpet 137 112
No Yes Helobdella robusta   113 98
No Yes Capitella sp. I   154 132
No Yes Danaus plexippus OGS1.0 Monarch butterfly 102 85
No Yes Heliconius melpomene Postman butterfly 103 78
No Yes Bombyx mori Domestic silkworm 90 77
No Yes Nasonia vitripennis Jewel wasp 94 71
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 214 147
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 105 84
No Yes Linepithema humile v1.1 Argentine ant 89 79
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 91 82
No Yes Solenopsis invicta v.2.2.3 Red fire ant 70 64
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 101 80
No Yes Atta cephalotes v1.1   85 77
No Yes Camponotus floridanus v3.3 Florida carpenter ant 101 84
No Yes Lucilia cuprina Australian sheep blowfly 77 67
No Yes Drosophila grimshawi 1.3   103 82
No Yes Drosophila willistoni 1.3   111 87
No Yes Drosophila pseudoobscura 2.13   101 83
No Yes Drosophila persimilis 1.3   99 82
No Yes Drosophila suzukii   94 85
No Yes Drosophila yakuba 1.3   102 88
No Yes Drosophila simulans 1.3   88 76
No Yes Drosophila sechellia 1.3   109 86
No Yes Drosophila melanogaster 76_5 Fruit fly 286 213
No Yes Drosophila erecta 1.3   117 86
No Yes Drosophila ananassae 1.3   120 92
No Yes Drosophila virilis 1.2   99 83
No Yes Drosophila mojavensis 1.3   120 85
No Yes Megaselia scalaris 22   28 25
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 131 98
No Yes Culex pipiens quinquefasciatus Southern house mosquito 115 78
No Yes Anopheles darlingi 22 American malaria mosquito 77 64
No Yes Anopheles gambiae 49_3j African malaria mosquito 95 78
No Yes Tribolium castaneum 3.0 Red flour beetle 108 88
No Yes Pediculus humanus corporis (Early assembly) Human body louse 103 83
No Yes Acyrthosiphon pisum Pea aphid 112 91
No Yes Rhodnius prolixus 22   94 82
No Yes Daphnia pulex Common water flea 112 95
No Yes Strigamia maritima 22   113 98
No Yes Sarcoptes scabiei   68 62
No Yes Tetranychus urticae Two-spotted spider mite 89 79
No Yes Ixodes scapularis (Preliminary) Black-legged tick 86 73
No Yes Pristionchus pacificus   82 64
No Yes Meloidogyne incognita Southern root-knot nematode 100 92
No Yes Meloidogyne hapla   51 50
No Yes Onchocerca volvulus 22   92 79
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 122 102
No Yes Caenorhabditis japonica   77 72
No Yes Caenorhabditis brenneri   129 111
No Yes Caenorhabditis remanei   113 93
No Yes Caenorhabditis elegans 76_235 Roundworm 209 163
No Yes Caenorhabditis briggsae 2   96 81
No Yes Trichinella spiralis 22   94 72
No Yes Hymenolepis microstoma   89 71
No Yes Echinococcus multilocularis   97 80
No Yes Echinococcus granulosus   100 81
No Yes Taenia solium Pork tapeworm 100 81
No Yes Schistosoma mansoni   92 83
No Yes Mnemiopsis leidyi Sea walnut 83 71
No Yes Thelohanellus kitauei   30 23
No Yes Acropora digitifera v1.0   131 114
No Yes Nematostella vectensis 1.0 Starlet sea anemone 132 113
No Yes Hydra vulgaris   107 85
No Yes Amphimedon queenslandica   235 177
No Yes Trichoplax adhaerens   91 76
No Yes Proterospongia sp. ATCC 50818   75 68
No Yes Monosiga brevicollis   55 52
No Yes Sphaeroforma arctica JP610   52 47
No Yes Capsaspora owczarzaki ATCC 30864   81 69
No Yes Conidiobolus coronatus NRRL28638 v1.0   52 44
No Yes Mortierella verticillata NRRL 6337   66 57
No Yes Phycomyces blakesleeanus   58 49
No Yes Rhizopus oryzae RA 99-880   62 55
No Yes Mucor circinelloides   58 50
No Yes Rhizomucor miehei CAU432   46 44
No Yes Malassezia globosa CBS 7966   42 40
No Yes Sporisorium reilianum 22   28 28
No Yes Ustilago maydis   32 27
No Yes Mixia osmundae IAM 14324 v1.0   29 29
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   35 29
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   38 31
No Yes Melampsora laricis-populina   40 33
No Yes Rhodotorula graminis WP1 v1.0   36 33
No Yes Sporobolomyces roseus IAM 13481   33 27
No Yes Microbotryum violaceum 22   30 30
No Yes Wallemia sebi v1.0   33 24
No Yes Sphaerobolus stellatus v1.0   58 47
No Yes Piloderma croceum F 1598 v1.0   77 58
No Yes Serpula lacrymans var. lacrymans S7.9   36 29
No Yes Coniophora puteana   36 33
No Yes Hydnomerulius pinastri v2.0   38 34
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   48 40
No Yes Pisolithus microcarpus 441 v1.0   55 43
No Yes Pisolithus tinctorius Marx 270 v1.0   41 35
No Yes Scleroderma citrinum Foug A v1.0   47 38
No Yes Coprinopsis cinerea okayama7 130 v3   43 37
No Yes Pleurotus ostreatus Oyster mushroom 51 36
No Yes Amanita thiersii Skay4041 v1.0   36 29
No Yes Amanita muscaria Koide v1.0 Fly agaric 46 38
No Yes Galerina marginata v1.0   55 44
No Yes Hebeloma cylindrosporum h7 v2.0   54 46
No Yes Laccaria bicolor S238N-H82   53 44
No Yes Agaricus bisporus var. bisporus   33 30
No Yes Schizophyllum commune   38 32
No Yes Stereum hirsutum FP-91666 SS1 v1.0   45 36
No Yes Heterobasidion annosum   41 33
No Yes Gloeophyllum trabeumv1.0   42 32
No Yes Punctularia strigosozonata v1.0   31 28
No Yes Sebacina vermifera MAFF 305830 v1.0   47 40
No Yes Fomitiporia mediterranea v1.0   38 35
No Yes Tulasnella calospora AL13/4D v1.0   59 52
No Yes Postia placenta   56 41
No Yes Wolfiporia cocos MD-104 SS10 v1.0   44 35
No Yes Fomitopsis pinicolav1.0   45 36
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   45 36
No Yes Phanerochaete chrysosporium RP-78 2.1   39 30
No Yes Dichomitus squalens   41 34
No Yes Trametes versicolor v1.0   55 35
No Yes Tremella mesenterica Witches' butter 28 23
No Yes Daldinia eschscholzii EC12 v1.0   32 28
No Yes Apiospora montagnei NRRL 25634 v1.0   32 28
No Yes Magnaporthe poae ATCC 64411 22   31 26
No Yes Magnaporthe grisea 70-15   31 27
No Yes Podospora anserina   30 26
No Yes Sporotrichum thermophile ATCC 42464   28 24
No Yes Thielavia terrestris NRRL 8126   29 25
No Yes Chaetomium globosum CBS 148.51   27 23
No Yes Neurospora tetrasperma   31 27
No Yes Neurospora discreta FGSC 8579   32 28
No Yes Neurospora crassa OR74A   33 29
No Yes Cryphonectria parasitica Chestnut blight fungus 32 29
No Yes Verticillium albo-atrum VaMs.102   29 27
No Yes Verticillium dahliae VdLs.17   31 28
No Yes Acremonium alcalophilumv 1.0   35 31
No Yes Glomerella graminicola 22   34 30
No Yes Fusarium graminearum   34 31
No Yes Nectria haematococca mpVI   35 32
No Yes Fusarium oxysporum f. sp. lycopersici 4286   35 31
No Yes Fusarium verticillioides 7600   32 28
No Yes Trichoderma asperellum CBS 433.97 v1.0   32 29
No Yes Trichoderma atroviride   33 30
No Yes Trichoderma citrinoviride v1.0   31 28
No Yes Trichoderma reesei 1.2   32 28
No Yes Trichoderma virens Gv29-8   34 30
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   33 29
No Yes Trichoderma harzianum CBS 226.95 v1.0   35 31
No Yes Amorphotheca resinae v1.0 Creosote fungus 35 31
No Yes Botrytis cinerea B05.10   34 31
No Yes Sclerotinia sclerotiorum   34 31
No Yes Blumeria graminis 22   30 29
No Yes Didymella exigua CBS 183.55 v1.0   32 28
No Yes Leptosphaeria maculans 22   30 25
No Yes Setosphaeria turcica v1.0   31 27
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   31 29
No Yes Cochliobolus victoriae FI3 v1.0   34 30
No Yes Cochliobolus carbonum 26-R-13 v1.0   29 28
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 30 26
No Yes Alternaria brassicicola   31 27
No Yes Cochliobolus lunatus m118 v2.0   35 31
No Yes Pyrenophora teres f. teres 22   32 29
No Yes Pyrenophora tritici-repentis   31 28
No Yes Stagonospora nodorum   32 29
No Yes Mycosphaerella graminicola IPO323   33 31
No Yes Zasmidium cellare ATCC 36951 v1.0   40 36
No Yes Dothistroma septosporum   45 40
No Yes Septoria musiva v1.0   34 30
No Yes Mycosphaerella fijiensis CIRAD86   39 33
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   29 26
No Yes Paracoccidioides brasiliensis Pb18   33 29
No Yes Coccidioides posadasii RMSCC 3488   32 29
No Yes Coccidioides immitis RS   33 29
No Yes Ajellomyces dermatitidis SLH14081   33 28
No Yes Histoplasma capsulatum class NAmI strain WU24   26 22
No Yes Microsporum canis CBS 113480   30 26
No Yes Trichophyton equinum CBS 127.97   31 28
No Yes Trichophyton verrucosum HKI 0517   27 24
No Yes Arthroderma benhamiae CBS 112371   28 25
No Yes Trichophyton tonsurans CBS 112818   31 28
No Yes Trichophyton rubrum CBS 118892   32 29
No Yes Uncinocarpus reesii 1704   25 21
No Yes Aspergillus zonatus v1.0   31 30
No Yes Penicillium chrysogenum Wisconsin 54-1255   31 27
No Yes Penicillium chrysogenum v1.0   32 28
No Yes Aspergillus acidus v1.0   33 29
No Yes Aspergillus fumigatus Af293   31 27
No Yes Aspergillus brasiliensis v1.0   33 29
No Yes Aspergillus nidulans FGSC A4   33 29
No Yes Aspergillus sydowii v1.0   33 29
No Yes Aspergillus versicolor v1.0   31 27
No Yes Aspergillus glaucus   33 29
No Yes Aspergillus carbonarius ITEM 5010   33 29
No Yes Neosartorya fischeri NRRL 181   35 31
No Yes Aspergillus terreus NIH2624   33 28
No Yes Aspergillus tubingensis v1.0   33 29
No Yes Aspergillus wentii v1.0   35 31
No Yes Aspergillus oryzae RIB40   27 24
No Yes Aspergillus niger 22   31 27
No Yes Aspergillus niger ATCC 1015   18 17
No Yes Aspergillus flavus NRRL3357   32 28
No Yes Aspergillus clavatus NRRL 1   34 30
No Yes Penicillium marneffei ATCC 18224   40 36
No Yes Tuber melanosporum Mel28 22   38 30
No Yes Tuber melanosporum Vittad Perigord truffle 39 31
No Yes Hansenula polymorpha v2.0   25 20
No Yes Dekkera bruxellensis CBS 2499 v2.0   20 20
No Yes Pichia membranifaciensv1.0   18 18
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   25 23
No Yes Candida dubliniensis CD36   24 21
No Yes Candida tropicalis MYA-3404   22 19
No Yes Candida parapsilosis   21 19
No Yes Candida albicans SC5314   24 22
No Yes Lodderomyces elongisporus NRRL YB-4239   21 18
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   20 19
No Yes Pichia stipitis CBS 6054   22 19
No Yes Candida guilliermondii ATCC 6260   27 22
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   22 22
No Yes Debaromyces hansenii   27 22
No Yes Wickerhamomyces anomalus   33 23
No Yes Pichia pastoris GS115   24 21
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   11 11
No Yes Yarrowia lipolytica CLIB122   30 25
No Yes Candida lusitaniae ATCC 42720   25 21
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   20 20
No Yes Vanderwaltozyma polyspora DSM 70294   33 26
No Yes Candida glabrata CBS138   33 26
No Yes Kluyveromyces thermotolerans CBS 6340   25 21
No Yes Lachancea kluyveri   28 24
No Yes Kluyveromyces waltii   20 17
No Yes Ashbya gossypii ATCC 10895   25 20
No Yes Zygosaccharomyces rouxii   29 23
No Yes Saccharomyces mikatae MIT   28 24
No Yes Saccharomyces paradoxus MIT   29 24
No Yes Saccharomyces cerevisiae 76 Baker's yeast 31 26
No Yes Saccharomyces bayanus MIT   30 24
No Yes Kluyveromyces lactis   25 21
No Yes Schizosaccharomyces cryophilus OY26 22   32 30
No Yes Schizosaccharomyces octosporus yFS286   32 29
No Yes Schizosaccharomyces japonicus yFS275   34 28
No Yes Schizosaccharomyces pombe Fission yeast 35 29
No Yes Catenaria anguillulae PL171 v1.0   60 55
No Yes Allomyces macrogynus ATCC 38327   105 94
No Yes Spizellomyces punctatus DAOM BR117   54 45
No Yes Dictyostelium discoideum   137 103
No Yes Dictyostelium purpureum   98 79
No Yes Entamoeba dispar 1.2   38 37
No Yes Entamoeba invadens 1.2   44 42
No Yes Entamoeba histolytica 1   43 42
No Yes Selaginella moellendorffii   135 88
No Yes Pinus taeda Loblolly pine 93 86
No Yes Picea abies Norway spruce 202 107
No Yes Eucalyptus grandis v201 Rose gum 186 161
No Yes Theobroma cacao B97-61/B2 v1 Cacao 135 103
No Yes Gossypium raimondii v221   576 425
No Yes Citrus clementina v165   242 172
No Yes Citrus sinensis v154 Sweet orange 263 186
No Yes Thellungiella halophila v173   199 154
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 169 154
No Yes Capsella rubella v183   200 141
No Yes Arabidopsis lyrata Lyrate rockcress 209 141
No Yes Arabidopsis thaliana 10 Thale cress 270 186
No Yes Carica papaya Papaya 98 75
No Yes Medicago truncatula Barrel medic 343 228
No Yes Phaseolus vulgaris v186 French bean 149 119
No Yes Glycine max v109 Soybean 363 272
No Yes Cucumis sativus v122 Cucumber 173 161
No Yes Fragaria vesca Wild strawberry 182 127
No Yes Malus domestica v196 Apple 347 271
No Yes Prunus persica v139 Peach 192 131
No Yes Linum usitatissimum v200 Flax 162 150
No Yes Manihot esculenta v147 Cassava 195 153
No Yes Populus trichocarpa v156 Black cottonwood 305 212
No Yes Vitis vinifera Wine grape 108 85
No Yes Mimulus guttatus v140 Spotted monkey flower 210 126
No Yes Solanum lycopersicum v.2.3 Tomato 151 119
No Yes Solanum tuberosum Potato 218 162
No Yes Actinidia chinensis Hongyang   175 132
No Yes Aquilegia coerulea v195   408 218
No Yes Triticum urartu 22   140 98
No Yes Triticum aestivum 22 Bread wheat 318 259
No Yes Aegilops tauschii 22   93 85
No Yes Brachypodium distachyon Stiff brome 163 121
No Yes Oryza barthii 22 African wild rice 142 123
No Yes Oryza meridionalis 22   141 123
No Yes Oryza glumaepatula 22   145 125
No Yes Oryza glaberrima African rice 122 98
No Yes Oryza punctata 22   142 111
No Yes Oryza nivara 22   158 138
No Yes Oryza brachyantha 22 Malo sina 130 104
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 270 185
No Yes Oryza sativa v193 Rice 269 183
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 140 104
No Yes Panicum virgatum v202 Switchgrass 384 266
No Yes Setaria italica v164 Foxtail millet 256 159
No Yes Zea mays subsp. mays Maize 252 181
No Yes Zea mays v181 Maize 287 215
No Yes Sorghum bicolor Sorghum 162 104
No Yes Musa balbisiana Balbis banana 145 120
No Yes Musa acuminata 22 Wild Malaysian banana 144 130
No Yes Amborella trichopoda 22   62 61
No Yes Physcomitrella patens   136 95
No Yes Coccomyxa subellipsoidea sp. C-169 v2   55 45
No Yes Asterochloris sp. Cgr/DA1pho v1.0   33 28
No Yes Chlorella variabilis sp. NC64A   53 41
No Yes Chlorella vulgaris   41 35
No Yes Volvox carteri f. nagariensis   45 38
No Yes Volvox carteri v199   53 42
No Yes Chlamydomonas reinhardtii 4.0   54 51
No Yes Ostreococcus sp. RCC809   26 24
No Yes Ostreococcus lucimarinus CCE9901   34 30
No Yes Ostreococcus tauri   27 24
No Yes Bathycoccus prasinos   37 32
No Yes Micromonas sp. RCC299   38 35
No Yes Micromonas pusilla CCMP1545 v3.0   42 37
No Yes Cyanidioschyzon merolae strain 10D 22   17 16
No Yes Cyanidioschyzon merolae   17 16
No Yes Porphyridium purpureum 02_2012   30 30
No Yes Thecamonas trahens ATCC 50062   64 59
No Yes Bigelowiella natans CCMP2755 22   133 110
No Yes Giardia lamblia 2.3   14 14
No Yes Cyanophora paradoxa   45 43
No Yes Leishmania mexicana 2.4   43 42
No Yes Leishmania major strain Friedlin   70 59
No Yes Leishmania infantum JPCM5 2.4   61 42
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   65 39
No Yes Trypanosoma vivax   34 31
No Yes Trypanosoma cruzi strain CL Brener   45 31
No Yes Trypanosoma congolense 2.4   42 28
No Yes Trypanosoma brucei gambiense v4.1   31 31
No Yes Trypanosoma brucei TREU927 v4.1   40 32
No Yes Ectocarpus siliculosus   68 57
No Yes Aureococcus anophagefferens   59 49
No Yes Albugo laibachii 22   64 54
No Yes Pythium iwayamai DAOM BR242034 22   53 48
No Yes Pythium arrhenomanes ATCC 12531 22   43 40
No Yes Pythium ultimum v1.7-2   57 54
No Yes Pythium aphanidermatum DAOM BR444 22   47 44
No Yes Pythium irregulare DAOM BR486 22   49 45
No Yes Pythium vexans DAOM BR484 22   44 42
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 69 57
No Yes Phytophthora sojae 1.1   65 56
No Yes Phytophthora infestans T30-4   66 59
No Yes Phytophthora capsici   61 52
No Yes Hyaloperonospora arabidopsidis 22   58 49
No Yes Phaeodactylum tricornutumCCAP 1055/1   35 31
No Yes Fragilariopsis cylindrus   96 70
No Yes Thalassiosira pseudonana CCMP1335   39 37
No Yes Perkinsus marinus ATCC 50983   77 64
No Yes Paramecium tetraurelia   203 153
No Yes Tetrahymena thermophila SB210 1   124 70
No Yes Ichthyophthirius multifiliis strain G5   30 27
No Yes Cryptosporidium hominis   24 21
No Yes Cryptosporidium muris   26 24
No Yes Cryptosporidium parvum Iowa II   28 25
No Yes Neospora caninum   42 35
No Yes Toxoplasma gondii VEG   32 28
No Yes Toxoplasma gondii ME49   34 30
No Yes Toxoplasma gondii GT1   33 29
No Yes Babesia bovis T2Bo   48 44
No Yes Theileria parva   27 26
No Yes Theileria annulata   22 21
No Yes Plasmodium falciparum 3D7   31 27
No Yes Plasmodium vivax SaI-1 7.0   29 25
No Yes Plasmodium knowlesi strain H   34 27
No Yes Plasmodium yoelii ssp. yoelii 1   24 21
No Yes Plasmodium chabaudi   31 28
No Yes Plasmodium berghei ANKA   29 27
No Yes Symbiodinium minutum clade B1 v1.2   460 428
No Yes Naegleria gruberi   113 78
No Yes Trichomonas vaginalis   230 207
No Yes Guillardia theta CCMP2712 v1.0   97 83
No Yes Emiliania huxleyi CCMP1516   137 121
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus albus 7   3 3
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus coagulans 2-6   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Thermoplasmatales archaeon BRNA1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 377 324
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 225 169
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 130 97
No Yes Ascaris suum Victoria/Ghent Pig roundworm 87 70
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 156 125
No Yes Cryptococcus neoformans var. grubii H99   29 25
No Yes Cryptococcus neoformans B-3501A   36 28
No Yes Cryptococcus neoformans JEC21   33 25
No Yes Paracoccidioides brasiliensis Pb01   32 27
No Yes Paracoccidioides brasiliensis Pb03   31 27
No Yes Coccidioides posadasii str. Silveira   31 28
No Yes Coccidioides immitis RMSCC 3703   27 25
No Yes Coccidioides immitis RMSCC 2394   33 29
No Yes Coccidioides immitis H538.4   31 26
No Yes Ajellomyces dermatitidis ER-3   32 28
No Yes Histoplasma capsulatum H143   30 26
No Yes Histoplasma capsulatum H88   32 28
No Yes Histoplasma capsulatum G186AR   33 29
No Yes Aspergillus fumigatus A1163   33 29
No Yes Candida albicans WO-1   22 20
No Yes Saccharomyces cerevisiae UC5   25 24
No Yes Saccharomyces cerevisiae PW5   28 23
No Yes Saccharomyces cerevisiae FL100   21 17
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   14 13
No Yes Saccharomyces cerevisiae CBS7960   23 22
No Yes Saccharomyces cerevisiae YJM269   26 21
No Yes Saccharomyces cerevisiae T7   31 26
No Yes Saccharomyces cerevisiae FostersB   25 22
No Yes Saccharomyces cerevisiae FostersO   18 18
No Yes Saccharomyces cerevisiae VL3   25 23
No Yes Saccharomyces cerevisiae Vin13   26 22
No Yes Saccharomyces cerevisiae LalvinQA23   22 22
No Yes Saccharomyces cerevisiae AWRI796   22 22
No Yes Saccharomyces cerevisiae Sigma1278b   30 26
No Yes Saccharomyces cerevisiae W303   28 26
No Yes Saccharomyces cerevisiae JAY291   26 25
No Yes Saccharomyces cerevisiae AWRI1631   17 16
No Yes Saccharomyces cerevisiae YPS163   10 10
No Yes Saccharomyces cerevisiae M22   12 12
No Yes Saccharomyces cerevisiae T73   11 11
No Yes Saccharomyces cerevisiae CLIB215   18 17
No Yes Saccharomyces cerevisiae Y10   8 7
No Yes Saccharomyces cerevisiae YJM789   30 25
No Yes Saccharomyces cerevisiae YJM789   31 26
No Yes Saccharomyces cerevisiae RM11-1a   31 26
No Yes Saccharomyces cerevisiae RM11-1a   31 26
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 31 26
No Yes Schizosaccharomyces pombe 972h-   35 29
No Yes Batrachochytrium dendrobatidis JEL423   37 34
No Yes Batrachochytrium dendrobatidis JAM81   37 32
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 141 100
No Yes Hordeum vulgare 22 Domesticated barley 119 112
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 180 136
No Yes Trypanosoma brucei Lister 427 v4.1   40 32
No Yes Neospora caninum Nc-Liverpool 6.2   42 35
No Yes Plasmodium falciparum HB3   24 20
No Yes Plasmodium falciparum Dd2   19 16
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D12   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 988 890
No Yes Homo sapiens (NCBI version) Human 324 296
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 218 191
No Yes Heliconius numata (Incomplete)   72 46
No Yes Loa loa v3.3 (Request) Eye worm 91 75
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 84 78
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 80 70
No Yes Moniliophthora perniciosa FA553 (Genome survey)   11 10
No Yes Encephalitozoon intestinalis (endoparasite)   9 9
No Yes Encephalitozoon cuniculi (endoparasite)   9 9
No Yes Picea sitchensis (Incomplete) Sitka spruce 18 16
No Yes Lotus japonicus (Early assembly)   97 77
No Yes Malus x domestica (Duplicate) Apple 347 271
No Yes Ricinus communis (Early assembly) Castor bean 97 84
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   174 163
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 150 118
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 151 119
No Yes Phoenix dactylifera (Early draft) Date palm 50 45
No Yes Homo sapiens 69_37 Human 239 207
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 197 177
No Yes Gorilla gorilla 69_3.1 Western gorilla 214 198
No Yes Pongo abelii 69_2 Sumatran orangutan 203 182
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 193 175
No Yes Macaca mulatta 69_1 Rhesus monkey 212 192
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 220 201
No Yes Otolemur garnettii 69_3 Small-eared galago 200 185
No Yes Microcebus murinus 69_1 Gray mouse lemur 136 126
No Yes Rattus norvegicus 69_3.4 Norway rat 243 218
No Yes Mus musculus 69_38 House mouse 217 190
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 146 135
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 172 163
No Yes Cavia porcellus 69_3 Domestic guinea pig 189 178
No Yes Oryctolagus cuniculus 69_2 Rabbit 195 186
No Yes Ochotona princeps 69 American pika 138 126
No Yes Tupaia belangeri 69 Northern tree shrew 123 117
No Yes Sus scrofa 69_10.2 Pig 191 174
No Yes Bos taurus 69_3.1 Cattle 202 183
No Yes Vicugna pacos 69_1 Alpaca 99 94
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 175 159
No Yes Mustela putorius furo 69_1.0 Domestic ferret 193 178
No Yes Ailuropoda melanoleuca 69_1 Giant panda 192 179
No Yes Canis familiaris 69_3.1 Dog 202 183
No Yes Felis catus 69 Domestic cat 130 115
No Yes Equus caballus 69_2 Horse 194 179
No Yes Myotis lucifugus 69_2.0 Little brown bat 203 189
No Yes Pteropus vampyrus 69_1 Large flying fox 176 161
No Yes Sorex araneus 69_1 European shrew 116 113
No Yes Erinaceus europaeus 69 Western European hedgehog 113 110
No Yes Procavia capensis 69_1 Cape rock hyrax 138 124
No Yes Loxodonta africana 69_3 African savanna elephant 200 185
No Yes Echinops telfairi 69 Small Madagascar hedgehog 139 134
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 114 111
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 110 104
No Yes Macropus eugenii 69_1.0 Tammar wallaby 153 141
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 182 165
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 200 181
No Yes Ornithorhynchus anatinus 69_5 Platypus 149 136
No Yes Petromyzon marinus 69_7.0 Sea lamprey 96 85
No Yes Meleagris gallopavo 69_2 Turkey 132 123
No Yes Gallus gallus 69_2 Chicken 159 143
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 158 143
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 154 141
No Yes Anolis carolinensis 69_2.0 Green anole 174 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 178 159
No Yes Latimeria chalumnae 69_1 Coelacanth 181 169
No Yes Gadus morhua 69_1 Atlantic cod 214 200
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 232 217
No Yes Takifugu rubripes 69_4 Torafugu 222 209
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 238 214
No Yes Oryzias latipes 69_1 Japanese medaka 218 197
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 236 222
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 231 217
No Yes Danio rerio 69_9 Zebrafish 259 234
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 68 57
No Yes Ciona intestinalis 69 Vase tunicate 103 90
No Yes Drosophila melanogaster 69_5 Fruit fly 114 90
No Yes Caenorhabditis elegans 69_215 Roundworm 102 86
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 31 26
No Yes Arabidopsis thaliana 10 Thale cress 177 134
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_050719S (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   2 2
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   3 3
No Yes Core Eukaryotic Genes 458 (CEGMA)   30 30
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   6 6
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes NCBI 2017_08 genome   169957 150215
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   6 5
No Yes Protozoadb 2010_08 (Protozoadb)   1519 1350
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   11467 9796
No Yes Termite Protist Endosymbiont Community (meta-genome)   3 2
No Yes Uniprot 2018_03 genome   132153 112843
No Yes Global Ocean Sampling Expedition (GOS)   574 527
No Yes NCBI plasmid sequences (Plasmids)   3 3
No Yes NCBI viral sequences (Viral)   97 96
No Yes PDB chains (SCOP 1.75) (PDB)   156 155
No Yes Protein Data Bank (all PDB sequenc)   2534 2451
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   4332 4332
No Yes TargetDB (Targets)   953 740
No Yes UniProt viral sequences (Viral)   110 100

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.