Select to display Genome Domains Proteins No ALL 206502 206502 No Homo sapiens 76_38 Human 483 400 No Pan troglodytes 76_2.1.4 Chimpanzee 130 112 No Gorilla gorilla 76_3.1 Western gorilla 188 156 No Pongo abelii 76_2 Sumatran orangutan 132 112 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 145 121 No Papio anubis 76 Olive baboon 144 124 No Macaca mulatta 76_1 Rhesus monkey 212 180 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 280 235 No Otolemur garnettii 76_3 Small-eared galago 135 115 No Microcebus murinus 76_1 Gray mouse lemur 98 87 No Rattus norvegicus 76_5.0 Norway rat 159 135 No Mus musculus 76_38 House mouse 312 260 No Dipodomys ordii 76_1 Ord's kangaroo rat 106 92 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 120 102 No Heterocephalus glaber v1.7-2 Naked mole-rat 137 117 No Cavia porcellus 76_3 Domestic guinea pig 159 120 No Oryctolagus cuniculus 76_2 Rabbit 120 106 No Ochotona princeps 76 American pika 105 92 No Tupaia belangeri 76 Northern tree shrew 93 81 No Sus scrofa 76_10.2 Pig 145 123 No Bos taurus 76_3.1 Cattle 139 120 No Ovis aries 76_3.1 Sheep 134 114 No Vicugna pacos 76_1 Alpaca 65 56 No Tursiops truncatus 76_1 Bottlenose dolphin 124 107 No Mustela putorius furo 76_1.0 Domestic ferret 132 114 No Ailuropoda melanoleuca 76_1 Giant panda 150 125 No Canis familiaris 76_3.1 Dog 178 146 No Felis catus 76_6.2 Domestic cat 131 112 No Equus caballus 76_2 Horse 151 127 No Myotis lucifugus 76_2.0 Little brown bat 126 112 No Pteropus vampyrus 76_1 Large flying fox 119 104 No Sorex araneus 76_1 European shrew 74 69 No Erinaceus europaeus 76 Western European hedgehog 82 72 No Procavia capensis 76_1 Cape rock hyrax 101 87 No Loxodonta africana 76_3 African savanna elephant 200 164 No Echinops telfairi 76 Small Madagascar hedgehog 94 84 No Dasypus novemcinctus 76_2 Nine-banded armadillo 165 136 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 59 53 No Macropus eugenii 76_1.0 Tammar wallaby 108 96 No Sarcophilus harrisii 76_7.0 Tasmanian devil 150 129 No Monodelphis domestica 76_5 Gray short-tailed opossum 137 117 No Ornithorhynchus anatinus 76_5 Platypus 117 100 No Saccoglossus kowalevskii v3.0 194 165 No Petromyzon marinus 76_7.0 Sea lamprey 68 51 No Meleagris gallopavo 76_2 Turkey 129 112 No Gallus gallus 76_4 Chicken 130 112 No Anas platyrhynchos 76_1.0 Mallard 129 109 No Taeniopygia guttata 76_3.2.4 Zebra finch 107 95 No Ficedula albicollis 76_1.0 Collared flycatcher 122 107 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 144 125 No Anolis carolinensis 76_2.0 Green anole 138 121 No Xenopus laevis African clawed frog 182 163 No Xenopus tropicalis 76_4.2 Tropical clawed frog 136 115 Yes Latimeria chalumnae 76_1 Coelacanth 170 142 No Lepisosteus oculatus 76 Spotted gar 196 167 No Gadus morhua 76_1 Atlantic cod 151 126 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 211 170 No Takifugu rubripes 76_4 Torafugu 659 514 No Gasterosteus aculeatus 76_1 Three-spined stickleback 215 181 No Oryzias latipes 76_1 Japanese medaka 172 142 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 162 136 No Poecilia formosa 76 Amazon molly 174 143 No Oreochromis niloticus 76_1.0 Nile tilapia 244 200 No Astyanax mexicanus 76 Mexican tetra 174 148 No Danio rerio 76_9 Zebrafish 292 249 No Oikopleura dioica 26 22 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 100 74 No Ciona intestinalis 76 Vase tunicate 59 53 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 92 80 No Adineta vaga 120 99 No Octopus bimaculoides 280 132 92 No Crassostrea gigas 22 Pacific oyster 93 79 No Lottia gigantea Owl limpet 66 57 No Helobdella robusta 56 44 No Capitella sp. I 61 54 No Danaus plexippus OGS1.0 Monarch butterfly 44 37 No Heliconius melpomene Postman butterfly 35 31 No Bombyx mori Domestic silkworm 38 33 No Nasonia vitripennis Jewel wasp 33 25 No Apis mellifera 38.2d (Not maintained) Honey bee 71 54 No Harpegnathos saltator v3.3 Jerdon's jumping ant 50 41 No Linepithema humile v1.1 Argentine ant 53 45 No Pogonomyrmex barbatus v1.2 Red harvester ant 47 41 No Solenopsis invicta v.2.2.3 Red fire ant 43 38 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 51 43 No Atta cephalotes v1.1 48 43 No Camponotus floridanus v3.3 Florida carpenter ant 45 37 No Lucilia cuprina Australian sheep blowfly 44 36 No Drosophila grimshawi 1.3 53 46 No Drosophila willistoni 1.3 49 42 No Drosophila pseudoobscura 2.13 52 45 No Drosophila persimilis 1.3 51 44 No Drosophila suzukii 48 40 No Drosophila yakuba 1.3 50 43 No Drosophila simulans 1.3 42 35 No Drosophila sechellia 1.3 50 43 No Drosophila melanogaster 76_5 Fruit fly 154 118 No Drosophila erecta 1.3 50 43 No Drosophila ananassae 1.3 49 43 No Drosophila virilis 1.2 50 43 No Drosophila mojavensis 1.3 51 44 No Megaselia scalaris 22 18 14 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 55 42 No Culex pipiens quinquefasciatus Southern house mosquito 43 36 No Anopheles darlingi 22 American malaria mosquito 25 24 No Anopheles gambiae 49_3j African malaria mosquito 50 43 No Tribolium castaneum 3.0 Red flour beetle 47 39 No Pediculus humanus corporis Human body louse 46 38 No Acyrthosiphon pisum Pea aphid 45 36 No Rhodnius prolixus 22 46 41 No Daphnia pulex Common water flea 58 49 No Strigamia maritima 22 60 49 No Sarcoptes scabiei 28 21 No Tetranychus urticae Two-spotted spider mite 45 40 No Ixodes scapularis Black-legged tick 41 34 No Pristionchus pacificus 25 21 No Meloidogyne incognita Southern root-knot nematode 32 28 No Meloidogyne hapla 14 12 No Onchocerca volvulus 22 27 22 No Brugia malayi WS250 Agent of lymphatic filariasis 46 34 No Caenorhabditis japonica 22 19 No Caenorhabditis brenneri 31 26 No Caenorhabditis remanei 39 35 No Caenorhabditis elegans 76_235 Roundworm 87 73 No Caenorhabditis briggsae 2 36 30 No Trichinella spiralis 22 28 23 No Hymenolepis microstoma 30 23 No Echinococcus multilocularis 27 22 No Echinococcus granulosus 27 22 No Taenia solium Pork tapeworm 28 24 No Schistosoma mansoni 33 28 No Mnemiopsis leidyi Sea walnut 29 25 No Thelohanellus kitauei 7 4 No Acropora digitifera v1.0 74 64 No Nematostella vectensis 1.0 Starlet sea anemone 61 53 No Hydra vulgaris 56 47 No Amphimedon queenslandica 69 62 No Trichoplax adhaerens 32 26 No Proterospongia sp. ATCC 50818 67 53 No Monosiga brevicollis 56 42 No Sphaeroforma arctica JP610 13 13 No Capsaspora owczarzaki ATCC 30864 33 30 No Conidiobolus coronatus NRRL28638 v1.0 11 11 No Mortierella verticillata NRRL 6337 12 12 No Phycomyces blakesleeanus 10 10 No Rhizopus oryzae RA 99-880 14 14 No Mucor circinelloides 12 12 No Rhizomucor miehei CAU432 12 12 No Malassezia globosa CBS 7966 6 6 No Sporisorium reilianum 22 4 4 No Ustilago maydis 4 4 No Mixia osmundae IAM 14324 v1.0 6 6 No Cronartium quercuum f. sp. fusiforme G11 v1.0 6 6 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 4 4 No Melampsora laricis-populina 5 5 No Rhodotorula graminis WP1 v1.0 2 2 No Sporobolomyces roseus IAM 13481 2 2 No Microbotryum violaceum 22 6 6 No Wallemia sebi v1.0 3 3 No Sphaerobolus stellatus v1.0 4 4 No Piloderma croceum F 1598 v1.0 4 4 No Serpula lacrymans var. lacrymans S7.9 2 2 No Coniophora puteana 4 4 No Hydnomerulius pinastri v2.0 5 5 No Paxillus rubicundulus Ve08.2h10 v1.0 4 4 No Pisolithus microcarpus 441 v1.0 4 4 No Pisolithus tinctorius Marx 270 v1.0 4 4 No Scleroderma citrinum Foug A v1.0 4 4 No Coprinopsis cinerea okayama7 130 v3 5 5 No Pleurotus ostreatus Oyster mushroom 4 4 No Amanita thiersii Skay4041 v1.0 5 5 No Amanita muscaria Koide v1.0 Fly agaric 5 5 No Galerina marginata v1.0 6 6 No Hebeloma cylindrosporum h7 v2.0 7 7 No Laccaria bicolor S238N-H82 8 8 No Agaricus bisporus var. bisporus 3 3 No Schizophyllum commune 5 5 No Stereum hirsutum FP-91666 SS1 v1.0 5 5 No Heterobasidion annosum 1 1 No Gloeophyllum trabeum v1.0 4 4 No Punctularia strigosozonata v1.0 4 4 No Sebacina vermifera MAFF 305830 v1.0 4 4 No Fomitiporia mediterranea v1.0 5 5 No Tulasnella calospora AL13/4D v1.0 3 3 No Postia placenta 5 5 No Wolfiporia cocos MD-104 SS10 v1.0 4 4 No Fomitopsis pinicola v1.0 4 4 No Fomitopsis pinicola FP-58527 SS1 v3.0 5 5 No Phanerochaete chrysosporium RP-78 2.1 3 3 No Dichomitus squalens 4 4 No Trametes versicolor v1.0 5 5 No Tremella mesenterica Witches' butter 3 3 No Daldinia eschscholzii EC12 v1.0 7 7 No Apiospora montagnei NRRL 25634 v1.0 7 7 No Magnaporthe poae ATCC 64411 22 5 5 No Magnaporthe grisea 70-15 6 6 No Podospora anserina 6 6 No Sporotrichum thermophile ATCC 42464 7 7 No Thielavia terrestris NRRL 8126 7 7 No Chaetomium globosum CBS 148.51 6 6 No Neurospora tetrasperma 7 7 No Neurospora discreta FGSC 8579 7 7 No Neurospora crassa OR74A 7 7 No Cryphonectria parasitica Chestnut blight fungus 7 7 No Verticillium albo-atrum VaMs.102 5 5 No Verticillium dahliae VdLs.17 7 7 No Acremonium alcalophilum v 1.0 7 7 No Glomerella graminicola 22 7 7 No Fusarium graminearum 8 8 No Nectria haematococca mpVI 8 8 No Fusarium oxysporum f. sp. lycopersici 4286 8 8 No Fusarium verticillioides 7600 7 7 No Trichoderma asperellum CBS 433.97 v1.0 7 7 No Trichoderma atroviride 6 6 No Trichoderma citrinoviride v1.0 6 6 No Trichoderma reesei 1.2 6 6 No Trichoderma virens Gv29-8 7 7 No Trichoderma longibrachiatum ATCC 18648 v1.0 6 6 No Trichoderma harzianum CBS 226.95 v1.0 7 7 No Amorphotheca resinae v1.0 Creosote fungus 7 7 No Botrytis cinerea B05.10 8 8 No Sclerotinia sclerotiorum 9 9 No Blumeria graminis 22 5 5 No Didymella exigua CBS 183.55 v1.0 7 7 No Leptosphaeria maculans 22 7 7 No Setosphaeria turcica v1.0 7 7 No Cochliobolus miyabeanus ATCC 44560 v1.0 7 7 No Cochliobolus victoriae FI3 v1.0 9 9 No Cochliobolus carbonum 26-R-13 v1.0 7 7 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 7 7 No Alternaria brassicicola 6 6 No Cochliobolus lunatus m118 v2.0 7 7 No Pyrenophora teres f. teres 22 7 7 No Pyrenophora tritici-repentis 7 7 No Stagonospora nodorum 6 6 No Mycosphaerella graminicola IPO323 6 6 No Zasmidium cellare ATCC 36951 v1.0 5 5 No Dothistroma septosporum 6 6 No Septoria musiva v1.0 5 5 No Mycosphaerella fijiensis CIRAD86 5 5 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 6 6 No Paracoccidioides brasiliensis Pb18 7 7 No Coccidioides posadasii RMSCC 3488 7 7 No Coccidioides immitis RS 7 7 No Ajellomyces dermatitidis SLH14081 6 6 No Histoplasma capsulatum class NAmI strain WU24 7 7 No Microsporum canis CBS 113480 6 6 No Trichophyton equinum CBS 127.97 6 6 No Trichophyton verrucosum HKI 0517 7 7 No Arthroderma benhamiae CBS 112371 7 7 No Trichophyton tonsurans CBS 112818 8 8 No Trichophyton rubrum CBS 118892 8 8 No Uncinocarpus reesii 1704 7 7 No Aspergillus zonatus v1.0 6 6 No Penicillium chrysogenum Wisconsin 54-1255 5 5 No Penicillium chrysogenum v1.0 5 5 No Aspergillus acidus v1.0 6 6 No Aspergillus fumigatus Af293 6 6 No Aspergillus brasiliensis v1.0 7 7 No Aspergillus nidulans FGSC A4 7 7 No Aspergillus sydowii v1.0 6 6 No Aspergillus versicolor v1.0 6 6 No Aspergillus glaucus 6 6 No Aspergillus carbonarius ITEM 5010 6 6 No Neosartorya fischeri NRRL 181 6 6 No Aspergillus terreus NIH2624 6 6 No Aspergillus tubingensis v1.0 6 6 No Aspergillus wentii v1.0 6 6 No Aspergillus oryzae RIB40 4 4 No Aspergillus niger 22 5 5 No Aspergillus niger ATCC 1015 4 4 No Aspergillus flavus NRRL3357 5 5 No Aspergillus clavatus NRRL 1 6 6 No Penicillium marneffei ATCC 18224 6 6 No Tuber melanosporum Mel28 22 7 7 No Tuber melanosporum Vittad Perigord truffle 7 7 No Hansenula polymorpha v2.0 4 4 No Dekkera bruxellensis CBS 2499 v2.0 2 2 No Pichia membranifaciens v1.0 3 3 No Candida tanzawaensis NRRL Y-17324 v1.0 5 5 No Candida dubliniensis CD36 4 4 No Candida tropicalis MYA-3404 4 4 No Candida parapsilosis 5 5 No Candida albicans SC5314 4 4 No Lodderomyces elongisporus NRRL YB-4239 5 5 No Babjeviella inositovora NRRL Y-12698 v1.0 3 3 No Pichia stipitis CBS 6054 4 4 No Candida guilliermondii ATCC 6260 5 5 No Hyphopichia burtonii NRRL Y-1933 v1.0 3 3 No Debaromyces hansenii 5 5 No Wickerhamomyces anomalus 4 4 No Pichia pastoris GS115 4 4 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 1 1 No Yarrowia lipolytica CLIB122 4 4 No Candida lusitaniae ATCC 42720 5 5 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 5 5 No Vanderwaltozyma polyspora DSM 70294 5 5 No Candida glabrata CBS138 5 5 No Kluyveromyces thermotolerans CBS 6340 4 4 No Lachancea kluyveri 4 4 No Kluyveromyces waltii 4 4 No Ashbya gossypii ATCC 10895 5 5 No Zygosaccharomyces rouxii 6 6 No Saccharomyces mikatae MIT 6 6 No Saccharomyces paradoxus MIT 5 5 No Saccharomyces cerevisiae 76 Baker's yeast 5 5 No Saccharomyces bayanus MIT 4 4 No Kluyveromyces lactis 4 4 No Schizosaccharomyces cryophilus OY26 22 4 4 No Schizosaccharomyces octosporus yFS286 4 4 No Schizosaccharomyces japonicus yFS275 4 4 No Schizosaccharomyces pombe Fission yeast 4 4 No Catenaria anguillulae PL171 v1.0 7 7 No Allomyces macrogynus ATCC 38327 21 21 No Spizellomyces punctatus DAOM BR117 10 9 No Dictyostelium discoideum 24 24 No Dictyostelium purpureum 31 31 No Entamoeba dispar 1.2 3 3 No Entamoeba invadens 1.2 2 2 No Entamoeba histolytica 1 2 2 No Selaginella moellendorffii 21 21 No Pinus taeda Loblolly pine 6 6 No Picea abies Norway spruce 6 6 No Eucalyptus grandis v201 Rose gum 25 25 No Theobroma cacao B97-61/B2 v1 Cacao 10 10 No Gossypium raimondii v221 51 51 No Citrus clementina v165 19 19 No Citrus sinensis v154 Sweet orange 23 23 No Thellungiella halophila v173 15 15 No Brassica rapa Chiifu-401 1.2 Field mustard 20 20 No Capsella rubella v183 14 14 No Arabidopsis lyrata Lyrate rockcress 12 12 No Arabidopsis thaliana 10 Thale cress 16 16 No Carica papaya Papaya 8 8 No Medicago truncatula Barrel medic 14 14 No Phaseolus vulgaris v186 French bean 14 14 No Glycine max v109 Soybean 35 35 No Cucumis sativus v122 Cucumber 16 16 No Fragaria vesca Wild strawberry 12 12 No Malus domestica v196 Apple 23 23 No Prunus persica v139 Peach 9 9 No Linum usitatissimum v200 Flax 18 18 No Manihot esculenta v147 Cassava 24 24 No Populus trichocarpa v156 Black cottonwood 20 20 No Vitis vinifera Wine grape 10 10 No Mimulus guttatus v140 Spotted monkey flower 15 15 No Solanum lycopersicum v.2.3 Tomato 12 12 No Solanum tuberosum Potato 17 17 No Actinidia chinensis Hongyang 14 14 No Aquilegia coerulea v195 16 16 No Triticum urartu 22 8 8 No Triticum aestivum 22 Bread wheat 26 26 No Aegilops tauschii 22 6 6 No Brachypodium distachyon Stiff brome 14 14 No Oryza barthii 22 African wild rice 11 11 No Oryza meridionalis 22 12 12 No Oryza glumaepatula 22 17 17 No Oryza glaberrima African rice 12 12 No Oryza punctata 22 11 11 No Oryza nivara 22 15 15 No Oryza brachyantha 22 Malo sina 12 12 No Oryza sativa ssp. japonica 5.0 Japanese rice 16 16 No Oryza sativa v193 Rice 16 16 No Phyllostachys heterocycla var. pubescens Kikko-chiku 19 19 No Panicum virgatum v202 Switchgrass 19 19 No Setaria italica v164 Foxtail millet 13 13 No Zea mays subsp. mays Maize 30 30 No Zea mays v181 Maize 31 31 No Sorghum bicolor Sorghum 14 14 No Musa balbisiana Balbis banana 16 16 No Musa acuminata 22 Wild Malaysian banana 20 20 No Amborella trichopoda 22 9 9 No Physcomitrella patens 16 16 No Coccomyxa subellipsoidea sp. C-169 v2 5 5 No Asterochloris sp. Cgr/DA1pho v1.0 2 2 No Chlorella variabilis sp. NC64A 6 6 No Chlorella vulgaris 3 3 No Volvox carteri f. nagariensis 8 8 No Volvox carteri v199 7 7 No Chlamydomonas reinhardtii 4.0 12 12 No Ostreococcus sp. RCC809 6 6 No Ostreococcus lucimarinus CCE9901 3 3 No Ostreococcus tauri 3 3 No Bathycoccus prasinos 4 4 No Micromonas sp. RCC299 8 8 No Micromonas pusilla CCMP1545 v3.0 7 7 No Porphyridium purpureum 02_2012 4 4 No Thecamonas trahens ATCC 50062 17 17 No Bigelowiella natans CCMP2755 22 61 61 No Giardia lamblia 2.3 2 2 No Cyanophora paradoxa 23 20 No Leishmania mexicana 2.4 2 2 No Leishmania major strain Friedlin 2 2 No Leishmania infantum JPCM5 2.4 2 2 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 2 2 No Trypanosoma vivax 3 3 No Trypanosoma cruzi strain CL Brener 4 4 No Trypanosoma congolense 2.4 5 5 No Trypanosoma brucei gambiense v4.1 4 4 No Trypanosoma brucei TREU927 v4.1 4 4 No Ectocarpus siliculosus 27 25 No Aureococcus anophagefferens 10 8 No Albugo laibachii 22 20 20 No Pythium iwayamai DAOM BR242034 22 15 15 No Pythium arrhenomanes ATCC 12531 22 13 13 No Pythium ultimum v1.7-2 16 16 No Pythium aphanidermatum DAOM BR444 22 18 18 No Pythium irregulare DAOM BR486 22 17 17 No Pythium vexans DAOM BR484 22 14 14 No Phytophthora ramorum 1.1 Sudden oak death agent 16 16 No Phytophthora sojae 1.1 15 15 No Phytophthora infestans T30-4 16 16 No Phytophthora capsici 12 12 No Hyaloperonospora arabidopsidis 22 5 5 No Phaeodactylum tricornutum CCAP 1055/1 2 2 No Fragilariopsis cylindrus 5 5 No Thalassiosira pseudonana CCMP1335 3 3 No Perkinsus marinus ATCC 50983 2 2 No Paramecium tetraurelia 31 31 No Tetrahymena thermophila SB210 1 8 7 No Ichthyophthirius multifiliis strain G5 4 4 No Cryptosporidium hominis 2 2 No Cryptosporidium muris 3 3 No Cryptosporidium parvum Iowa II 2 2 No Neospora caninum 2 2 No Toxoplasma gondii VEG 2 2 No Toxoplasma gondii ME49 2 2 No Toxoplasma gondii GT1 1 1 No Plasmodium falciparum 3D7 4 4 No Plasmodium vivax SaI-1 7.0 4 4 No Plasmodium knowlesi strain H 4 4 No Plasmodium yoelii ssp. yoelii 1 3 3 No Plasmodium chabaudi 4 4 No Plasmodium berghei ANKA 4 4 No Symbiodinium minutum clade B1 v1.2 39 39 No Naegleria gruberi 26 26 No Trichomonas vaginalis 9 9 No Guillardia theta CCMP2712 v1.0 52 50 No Emiliania huxleyi CCMP1516 23 22 No Sphaerochaeta pleomorpha str. Grapes 1 1 No Burkholderia phymatum STM815 2 2 No Burkholderia sp. RPE64 1 1 No Burkholderia sp. CCGE1002 3 3 No Nitrosomonas eutropha C91 1 1 No Nitrosomonas europaea ATCC 19718 1 1 No Ruegeria pomeroyi DSS-3 1 1 No Sinorhizobium medicae WSM419 2 2 No Sinorhizobium meliloti AK83 2 2 No Agrobacterium radiobacter K84 1 1 No Bradyrhizobium japonicum USDA 110 2 2 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 177 155 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 108 86 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 55 47 No Ascaris suum Victoria/Ghent Pig roundworm 29 25 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 60 50 No Cryptococcus neoformans var. grubii H99 4 4 No Cryptococcus neoformans B-3501A 4 4 No Cryptococcus neoformans JEC21 4 4 No Paracoccidioides brasiliensis Pb01 7 7 No Paracoccidioides brasiliensis Pb03 5 5 No Coccidioides posadasii str. Silveira 7 7 No Coccidioides immitis RMSCC 3703 6 6 No Coccidioides immitis RMSCC 2394 7 7 No Coccidioides immitis H538.4 6 6 No Ajellomyces dermatitidis ER-3 6 6 No Histoplasma capsulatum H143 7 7 No Histoplasma capsulatum H88 7 7 No Histoplasma capsulatum G186AR 6 6 No Aspergillus fumigatus A1163 6 6 No Candida albicans WO-1 4 4 No Saccharomyces cerevisiae UC5 5 5 No Saccharomyces cerevisiae PW5 5 5 No Saccharomyces cerevisiae FL100 2 2 No Saccharomyces cerevisiae CBS7960 4 4 No Saccharomyces cerevisiae YJM269 4 4 No Saccharomyces cerevisiae T7 5 5 No Saccharomyces cerevisiae FostersB 4 4 No Saccharomyces cerevisiae FostersO 4 4 No Saccharomyces cerevisiae VL3 3 3 No Saccharomyces cerevisiae Vin13 4 4 No Saccharomyces cerevisiae LalvinQA23 3 3 No Saccharomyces cerevisiae AWRI796 5 5 No Saccharomyces cerevisiae Sigma1278b 5 5 No Saccharomyces cerevisiae W303 5 5 No Saccharomyces cerevisiae JAY291 5 5 No Saccharomyces cerevisiae AWRI1631 3 3 No Saccharomyces cerevisiae YPS163 3 3 No Saccharomyces cerevisiae M22 1 1 No Saccharomyces cerevisiae CLIB215 3 3 No Saccharomyces cerevisiae Y10 3 3 No Saccharomyces cerevisiae YJM789 5 5 No Saccharomyces cerevisiae YJM789 5 5 No Saccharomyces cerevisiae RM11-1a 5 5 No Saccharomyces cerevisiae RM11-1a 4 4 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 5 5 No Schizosaccharomyces pombe 972h- 4 4 No Batrachochytrium dendrobatidis JEL423 7 7 No Batrachochytrium dendrobatidis JAM81 3 3 No Theobroma cacao Matina 1-6 v0.9 Cacao 11 11 No Hordeum vulgare 22 Domesticated barley 18 18 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 10 10 No Trypanosoma brucei Lister 427 v4.1 4 4 No Neospora caninum Nc-Liverpool 6.2 2 2 No Plasmodium falciparum HB3 4 4 No Plasmodium falciparum Dd2 3 3 No Burkholderia sp. YI23 2 2 No Sinorhizobium fredii USDA 257 1 1 No Sinorhizobium fredii HH103 1 1 No Sinorhizobium meliloti GR4 5 5 No Sinorhizobium meliloti Rm41 3 3 No Sinorhizobium meliloti SM11 3 3 No Sinorhizobium meliloti BL225C 4 4 No Sinorhizobium meliloti 1021 2 2 No Rhizobium leguminosarum bv. trifolii WSM2304 1 1 No Rhizobium leguminosarum bv. trifolii WSM1325 1 1 No Bradyrhizobium sp. S23321 2 2 No Bradyrhizobium japonicum USDA 6 3 3 No Homo sapiens 75_37 (old version GRC) Human 500 412 No Homo sapiens Human 254 202 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 130 110 No Heliconius numata 7 7 No Loa loa v3.3 (Request) Eye worm 26 21 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 28 23 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 25 20 No Moniliophthora perniciosa FA553 3 3 No Encephalitozoon intestinalis 1 1 No Encephalitozoon cuniculi (endoparasite) 1 1 No Picea sitchensis Sitka spruce 2 2 No Lotus japonicus 9 9 No Malus x domestica (Duplicate) Apple 23 23 No Ricinus communis Castor bean 11 11 No Nicotiana benthamiana 0.4.4 (Early draft) 27 27 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 12 12 No Solanum lycopersicum v2.3 (Early assembly) Tomato 12 12 No Phoenix dactylifera Date palm 5 5 No Homo sapiens 69_37 Human 142 120 No Pan troglodytes 69_2.1.4 Chimpanzee 129 111 No Gorilla gorilla 69_3.1 Western gorilla 132 113 No Pongo abelii 69_2 Sumatran orangutan 125 106 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 125 105 No Macaca mulatta 69_1 Rhesus monkey 124 106 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 128 110 No Otolemur garnettii 69_3 Small-eared galago 129 109 No Microcebus murinus 69_1 Gray mouse lemur 98 87 No Rattus norvegicus 69_3.4 Norway rat 130 109 No Mus musculus 69_38 House mouse 131 111 No Dipodomys ordii 69_1 Ord's kangaroo rat 106 92 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 109 96 No Cavia porcellus 69_3 Domestic guinea pig 142 110 No Oryctolagus cuniculus 69_2 Rabbit 115 102 No Ochotona princeps 69 American pika 105 92 No Tupaia belangeri 69 Northern tree shrew 93 81 No Sus scrofa 69_10.2 Pig 119 101 No Bos taurus 69_3.1 Cattle 128 109 No Vicugna pacos 69_1 Alpaca 65 56 No Tursiops truncatus 69_1 Bottlenose dolphin 124 107 No Mustela putorius furo 69_1.0 Domestic ferret 130 113 No Ailuropoda melanoleuca 69_1 Giant panda 129 109 No Canis familiaris 69_3.1 Dog 134 114 No Felis catus 69 Domestic cat 93 84 No Equus caballus 69_2 Horse 127 111 No Myotis lucifugus 69_2.0 Little brown bat 122 108 No Pteropus vampyrus 69_1 Large flying fox 119 104 No Sorex araneus 69_1 European shrew 74 69 No Erinaceus europaeus 69 Western European hedgehog 82 72 No Procavia capensis 69_1 Cape rock hyrax 101 87 No Loxodonta africana 69_3 African savanna elephant 129 110 No Echinops telfairi 69 Small Madagascar hedgehog 94 84 No Dasypus novemcinctus 69_2 Nine-banded armadillo 79 68 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 59 53 No Macropus eugenii 69_1.0 Tammar wallaby 108 96 No Sarcophilus harrisii 69_7.0 Tasmanian devil 121 104 No Monodelphis domestica 69_5 Gray short-tailed opossum 128 110 No Ornithorhynchus anatinus 69_5 Platypus 107 91 No Petromyzon marinus 69_7.0 Sea lamprey 55 45 No Meleagris gallopavo 69_2 Turkey 113 98 No Gallus gallus 69_2 Chicken 120 105 No Taeniopygia guttata 69_3.2.4 Zebra finch 104 92 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 111 97 No Anolis carolinensis 69_2.0 Green anole 130 113 No Xenopus tropicalis 69_4.2 Tropical clawed frog 111 96 No Latimeria chalumnae 69_1 Coelacanth 135 116 No Gadus morhua 69_1 Atlantic cod 148 123 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 164 134 No Takifugu rubripes 69_4 Torafugu 162 132 No Gasterosteus aculeatus 69_1 Three-spined stickleback 169 140 No Oryzias latipes 69_1 Japanese medaka 138 112 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 162 136 No Oreochromis niloticus 69_1.0 Nile tilapia 180 149 No Danio rerio 69_9 Zebrafish 172 146 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 36 31 No Ciona intestinalis 69 Vase tunicate 54 48 No Drosophila melanogaster 69_5 Fruit fly 51 43 No Caenorhabditis elegans 69_215 Roundworm 30 26 No Saccharomyces cerevisiae 69_4 Baker's yeast 5 5 No Arabidopsis thaliana 10 Thale cress 13 13 No Dump bottom (Dump bottom) (meta-genome) 1 1 No Dump top (Dump top) (meta-genome) 1 1 No Endophytic microbiome from Rice (meta-genome) 1 1 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 3 3 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 4 4 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 1 1 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 4 4 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 1 1 No NCBI 2017_08 genome 107223 84014 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 3 3 No Protozoadb 2010_08 (Protozoadb) 102 102 No simLC - Simulated Low Complexity Metagenome (meta-genome) 2 2 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 1 1 No Soil microbial communities from Minnesota Farm (meta-genome) 1 1 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 8 8 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 8 8 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 8 8 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 11 11 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 36 36 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 28 28 No STRING v9.0.5 (STRING) 4943 4258 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 1 1 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 1 1 No Uniprot 2018_03 genome 53726 45231 No Global Ocean Sampling Expedition (GOS) 114 109 No NCBI plasmid sequences (Plasmids) 26 26 No NCBI viral sequences (Viral) 5 5 No PDB chains (SCOP 1.75 ) (PDB) 33 33 No Protein Data Bank (all PDB sequenc) 240 215 No SCOP2 SCOPe CATH ECOD (all domain sequ) 513 513 No TargetDB 148 140 No UniProt 1 1
