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RalF, C-terminal domain superfamily domain assignments
in
STRING v9.0.5

Network of domain occurrence in all genomes

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STRING v9.0.5 (STRING) has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
257363.RT0362   5.89e-68   196-355   RalF, C-terminal domain  
272624.lpg1950   3.92e-74   198-349   RalF, C-terminal domain  
272947.RP374   2.75e-73   200-360   RalF, C-terminal domain  
293614.A1C_02770   8.63e-65   199-358   RalF, C-terminal domain  
297245.lpl1919   6.41e-75   198-353   RalF, C-terminal domain  
297246.lpp1932   4.05e-76   198-352   RalF, C-terminal domain  
315456.RF_0585   3.14e-67   200-359   RalF, C-terminal domain  
336407.RBE_0868   5.36e-75   203-357   RalF, C-terminal domain  
391896.A1I_02560   1.96e-74   203-356   RalF, C-terminal domain  
400673.LPC_1423   6.8e-79   198-353   RalF, C-terminal domain  
 
Weak hits:
135651.CBN01424   0.068   137-184   RalF, C-terminal domain  
135651.CBN10673   0.0288   125-200   RalF, C-terminal domain  
146891.A9601_13621   0.0471   6-65   RalF, C-terminal domain  
167555.NATL1_11661   0.0157   19-51   RalF, C-terminal domain  
167555.NATL1_12791   0.0497   86-124   RalF, C-terminal domain  
190304.FN1177   0.0314   36-155   RalF, C-terminal domain  
203123.OEOE_0197   0.0123   104-158   RalF, C-terminal domain  
272621.LBA1148   0.0405   469-529   RalF, C-terminal domain  
294381.C4LYA1   0.0379   597-624   RalF, C-terminal domain  
324831.LGAS_1011   0.0575   487-529   RalF, C-terminal domain  
326298.Suden_0029   0.0131   377-431   RalF, C-terminal domain  
329726.AM1_B0358   0.0196   4-40   RalF, C-terminal domain  
351605.Gura_1094   0.0745   855-898   RalF, C-terminal domain  
357244.OTBS_0782   0.034   86-138   RalF, C-terminal domain  
36870.WGLp037   0.0209   23-95   RalF, C-terminal domain  
387344.LVIS_1608   0.0562   29-75   RalF, C-terminal domain  
395961.Cyan7425_2244   0.0314   15-51   RalF, C-terminal domain  
435591.BDI_0013   0.0798   38-72   RalF, C-terminal domain  
436907.A7TGA2   0.0641   186-265   RalF, C-terminal domain  
4959.Q6BLU1   0.0418   384-427   RalF, C-terminal domain  
4959.Q6BVS1   0.0366   38-85   RalF, C-terminal domain  
500485.B6H1I9   0.00262   33-102   RalF, C-terminal domain  
51511.ENSCSAVP00000019961   0.0745   115-188   RalF, C-terminal domain  
521097.Coch_1248   0.0589   54-88   RalF, C-terminal domain  
521460.Athe_1969   0.0248   93-162   RalF, C-terminal domain  
5722.A2DHY6   0.0785   85-167   RalF, C-terminal domain  
5722.A2EUI3   0.0314   242-282   RalF, C-terminal domain  
5855.PVX_100770   0.00628   39-89   RalF, C-terminal domain  
5911.XP_001007761   0.00122   924-963   RalF, C-terminal domain  
5911.XP_001012285   0.0562   1713-1760   RalF, C-terminal domain  
59920.PMN2A_0666   0.0366   42-93   RalF, C-terminal domain  
59920.PMN2A_0943   0.0497   16-45   RalF, C-terminal domain  
6085.XP_002169653   0.0418   172-218   RalF, C-terminal domain  
7668.XP_789731   0.0114   160-219   RalF, C-terminal domain  
93059.P9211_11761   0.0314   21-50   RalF, C-terminal domain  

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View all assignments containing a RalF, C-terminal domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   663 663
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia typhi str. B9991CWPP   1 1
No Yes Rickettsia typhi str. TH1527   1 1
No Yes Rickettsia prowazekii str. Breinl   1 1
No Yes Rickettsia prowazekii str. NMRC Madrid E   1 1
No Yes Rickettsia prowazekii str. RpGvF24   1 1
No Yes Rickettsia prowazekii str. GvV257   1 1
No Yes Rickettsia prowazekii str. Dachau   1 1
No Yes Rickettsia prowazekii str. Katsinyian   1 1
No Yes Rickettsia prowazekii str. Chernikova   1 1
No Yes Rickettsia prowazekii Rp22   1 1
No Yes Rickettsia prowazekii str. Madrid E   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes NCBI 2017_08 genome   550 550
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10 10
No Yes Uniprot 2018_03 genome   40 40
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   5 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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