Select to display Genome Domains Proteins No ALL 650115 650115 Yes Homo sapiens 76_38 Human 1170 1021 No Pan troglodytes 76_2.1.4 Chimpanzee 292 254 No Gorilla gorilla 76_3.1 Western gorilla 400 346 No Pongo abelii 76_2 Sumatran orangutan 317 270 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 296 256 No Papio anubis 76 Olive baboon 329 279 No Macaca mulatta 76_1 Rhesus monkey 518 443 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 679 570 No Otolemur garnettii 76_3 Small-eared galago 352 312 No Microcebus murinus 76_1 Gray mouse lemur 239 204 No Rattus norvegicus 76_5.0 Norway rat 372 319 No Mus musculus 76_38 House mouse 689 600 No Dipodomys ordii 76_1 Ord's kangaroo rat 221 194 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 294 262 No Heterocephalus glaber v1.7-2 Naked mole-rat 312 275 No Cavia porcellus 76_3 Domestic guinea pig 295 256 No Oryctolagus cuniculus 76_2 Rabbit 294 250 No Ochotona princeps 76 American pika 230 202 No Tupaia belangeri 76 Northern tree shrew 206 181 No Sus scrofa 76_10.2 Pig 408 366 No Bos taurus 76_3.1 Cattle 322 275 No Ovis aries 76_3.1 Sheep 344 293 No Vicugna pacos 76_1 Alpaca 170 146 No Tursiops truncatus 76_1 Bottlenose dolphin 259 223 No Mustela putorius furo 76_1.0 Domestic ferret 311 257 No Ailuropoda melanoleuca 76_1 Giant panda 343 294 No Canis familiaris 76_3.1 Dog 411 351 No Felis catus 76_6.2 Domestic cat 312 269 No Equus caballus 76_2 Horse 355 306 No Myotis lucifugus 76_2.0 Little brown bat 293 258 No Pteropus vampyrus 76_1 Large flying fox 271 234 No Sorex araneus 76_1 European shrew 159 142 No Erinaceus europaeus 76 Western European hedgehog 195 171 No Procavia capensis 76_1 Cape rock hyrax 260 228 No Loxodonta africana 76_3 African savanna elephant 405 345 No Echinops telfairi 76 Small Madagascar hedgehog 198 178 No Dasypus novemcinctus 76_2 Nine-banded armadillo 379 317 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 159 136 No Macropus eugenii 76_1.0 Tammar wallaby 236 209 No Sarcophilus harrisii 76_7.0 Tasmanian devil 341 284 No Monodelphis domestica 76_5 Gray short-tailed opossum 372 270 No Ornithorhynchus anatinus 76_5 Platypus 257 235 No Saccoglossus kowalevskii v3.0 456 398 No Petromyzon marinus 76_7.0 Sea lamprey 176 138 No Meleagris gallopavo 76_2 Turkey 252 217 No Gallus gallus 76_4 Chicken 249 219 No Anas platyrhynchos 76_1.0 Mallard 229 197 No Taeniopygia guttata 76_3.2.4 Zebra finch 236 207 No Ficedula albicollis 76_1.0 Collared flycatcher 244 211 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 306 265 No Anolis carolinensis 76_2.0 Green anole 272 232 No Xenopus laevis African clawed frog 544 477 No Xenopus tropicalis 76_4.2 Tropical clawed frog 324 267 No Latimeria chalumnae 76_1 Coelacanth 313 272 No Lepisosteus oculatus 76 Spotted gar 399 322 No Gadus morhua 76_1 Atlantic cod 326 291 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 372 337 No Takifugu rubripes 76_4 Torafugu 851 726 No Gasterosteus aculeatus 76_1 Three-spined stickleback 441 387 No Oryzias latipes 76_1 Japanese medaka 374 331 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 331 291 No Poecilia formosa 76 Amazon molly 346 309 No Oreochromis niloticus 76_1.0 Nile tilapia 450 393 No Astyanax mexicanus 76 Mexican tetra 360 323 No Danio rerio 76_9 Zebrafish 591 512 No Oikopleura dioica 183 169 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 271 247 No Ciona intestinalis 76 Vase tunicate 193 170 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 256 222 No Adineta vaga 729 673 No Octopus bimaculoides 280 268 238 No Crassostrea gigas 22 Pacific oyster 347 289 No Lottia gigantea Owl limpet 297 262 No Helobdella robusta 212 191 No Capitella sp. I 276 240 No Danaus plexippus OGS1.0 Monarch butterfly 125 111 No Heliconius melpomene Postman butterfly 106 94 No Bombyx mori Domestic silkworm 109 102 No Nasonia vitripennis Jewel wasp 95 82 No Apis mellifera 38.2d (Not maintained) Honey bee 279 235 No Harpegnathos saltator v3.3 Jerdon's jumping ant 117 102 No Linepithema humile v1.1 Argentine ant 119 103 No Pogonomyrmex barbatus v1.2 Red harvester ant 118 103 No Solenopsis invicta v.2.2.3 Red fire ant 99 83 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 111 93 No Atta cephalotes v1.1 115 99 No Camponotus floridanus v3.3 Florida carpenter ant 115 100 No Lucilia cuprina Australian sheep blowfly 108 88 No Drosophila grimshawi 1.3 128 110 No Drosophila willistoni 1.3 138 118 No Drosophila pseudoobscura 2.13 132 112 No Drosophila persimilis 1.3 127 109 No Drosophila suzukii 151 117 No Drosophila yakuba 1.3 137 120 No Drosophila simulans 1.3 115 99 No Drosophila sechellia 1.3 131 113 No Drosophila melanogaster 76_5 Fruit fly 341 276 No Drosophila erecta 1.3 129 112 No Drosophila ananassae 1.3 135 117 No Drosophila virilis 1.2 130 109 No Drosophila mojavensis 1.3 128 111 No Megaselia scalaris 22 54 49 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 145 125 No Culex pipiens quinquefasciatus Southern house mosquito 121 109 No Anopheles darlingi 22 American malaria mosquito 79 66 No Anopheles gambiae 49_3j African malaria mosquito 120 102 No Tribolium castaneum 3.0 Red flour beetle 137 114 No Pediculus humanus corporis Human body louse 120 105 No Acyrthosiphon pisum Pea aphid 106 92 No Rhodnius prolixus 22 110 101 No Daphnia pulex Common water flea 122 106 No Strigamia maritima 22 135 112 No Sarcoptes scabiei 90 80 No Tetranychus urticae Two-spotted spider mite 110 96 No Ixodes scapularis Black-legged tick 123 111 No Pristionchus pacificus 115 103 No Meloidogyne incognita Southern root-knot nematode 100 89 No Meloidogyne hapla 61 53 No Onchocerca volvulus 22 99 86 No Brugia malayi WS250 Agent of lymphatic filariasis 137 123 No Caenorhabditis japonica 109 94 No Caenorhabditis brenneri 139 119 No Caenorhabditis remanei 127 108 No Caenorhabditis elegans 76_235 Roundworm 225 191 No Caenorhabditis briggsae 2 116 99 No Trichinella spiralis 22 91 80 No Hymenolepis microstoma 135 119 No Echinococcus multilocularis 136 119 No Echinococcus granulosus 134 115 No Taenia solium Pork tapeworm 138 125 No Schistosoma mansoni 180 158 No Mnemiopsis leidyi Sea walnut 219 193 No Thelohanellus kitauei 23 21 No Acropora digitifera v1.0 187 173 No Nematostella vectensis 1.0 Starlet sea anemone 260 222 No Hydra vulgaris 167 148 No Amphimedon queenslandica 168 149 No Trichoplax adhaerens 156 131 No Proterospongia sp. ATCC 50818 153 138 No Monosiga brevicollis 116 103 No Sphaeroforma arctica JP610 74 69 No Capsaspora owczarzaki ATCC 30864 68 61 No Conidiobolus coronatus NRRL28638 v1.0 42 37 No Mortierella verticillata NRRL 6337 60 54 No Phycomyces blakesleeanus 63 51 No Rhizopus oryzae RA 99-880 64 53 No Mucor circinelloides 69 61 No Rhizomucor miehei CAU432 54 42 No Malassezia globosa CBS 7966 36 32 No Sporisorium reilianum 22 25 23 No Ustilago maydis 27 25 No Mixia osmundae IAM 14324 v1.0 24 22 No Cronartium quercuum f. sp. fusiforme G11 v1.0 26 23 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 29 26 No Melampsora laricis-populina 28 26 No Rhodotorula graminis WP1 v1.0 23 20 No Sporobolomyces roseus IAM 13481 19 19 No Microbotryum violaceum 22 26 24 No Wallemia sebi v1.0 22 20 No Sphaerobolus stellatus v1.0 32 29 No Piloderma croceum F 1598 v1.0 40 33 No Serpula lacrymans var. lacrymans S7.9 33 27 No Coniophora puteana 28 25 No Hydnomerulius pinastri v2.0 28 25 No Paxillus rubicundulus Ve08.2h10 v1.0 28 26 No Pisolithus microcarpus 441 v1.0 30 27 No Pisolithus tinctorius Marx 270 v1.0 36 33 No Scleroderma citrinum Foug A v1.0 33 29 No Coprinopsis cinerea okayama7 130 v3 31 26 No Pleurotus ostreatus Oyster mushroom 30 27 No Amanita thiersii Skay4041 v1.0 33 30 No Amanita muscaria Koide v1.0 Fly agaric 36 33 No Galerina marginata v1.0 40 35 No Hebeloma cylindrosporum h7 v2.0 37 32 No Laccaria bicolor S238N-H82 33 28 No Agaricus bisporus var. bisporus 34 29 No Schizophyllum commune 35 31 No Stereum hirsutum FP-91666 SS1 v1.0 31 27 No Heterobasidion annosum 28 25 No Gloeophyllum trabeum v1.0 29 26 No Punctularia strigosozonata v1.0 30 27 No Sebacina vermifera MAFF 305830 v1.0 33 30 No Fomitiporia mediterranea v1.0 28 26 No Tulasnella calospora AL13/4D v1.0 40 38 No Postia placenta 46 37 No Wolfiporia cocos MD-104 SS10 v1.0 29 24 No Fomitopsis pinicola v1.0 30 25 No Fomitopsis pinicola FP-58527 SS1 v3.0 29 24 No Phanerochaete chrysosporium RP-78 2.1 31 26 No Dichomitus squalens 32 26 No Trametes versicolor v1.0 32 26 No Tremella mesenterica Witches' butter 22 21 No Daldinia eschscholzii EC12 v1.0 32 28 No Apiospora montagnei NRRL 25634 v1.0 30 28 No Magnaporthe poae ATCC 64411 22 26 25 No Magnaporthe grisea 70-15 34 30 No Podospora anserina 32 26 No Sporotrichum thermophile ATCC 42464 30 26 No Thielavia terrestris NRRL 8126 30 26 No Chaetomium globosum CBS 148.51 30 26 No Neurospora tetrasperma 28 26 No Neurospora discreta FGSC 8579 28 26 No Neurospora crassa OR74A 33 29 No Cryphonectria parasitica Chestnut blight fungus 29 25 No Verticillium albo-atrum VaMs.102 26 23 No Verticillium dahliae VdLs.17 28 24 No Acremonium alcalophilum v 1.0 26 24 No Glomerella graminicola 22 33 29 No Fusarium graminearum 28 24 No Nectria haematococca mpVI 31 26 No Fusarium oxysporum f. sp. lycopersici 4286 35 31 No Fusarium verticillioides 7600 29 24 No Trichoderma asperellum CBS 433.97 v1.0 29 25 No Trichoderma atroviride 30 26 No Trichoderma citrinoviride v1.0 29 25 No Trichoderma reesei 1.2 29 25 No Trichoderma virens Gv29-8 30 26 No Trichoderma longibrachiatum ATCC 18648 v1.0 28 24 No Trichoderma harzianum CBS 226.95 v1.0 29 25 No Amorphotheca resinae v1.0 Creosote fungus 30 26 No Botrytis cinerea B05.10 33 29 No Sclerotinia sclerotiorum 31 27 No Blumeria graminis 22 30 26 No Didymella exigua CBS 183.55 v1.0 29 25 No Leptosphaeria maculans 22 30 27 No Setosphaeria turcica v1.0 31 27 No Cochliobolus miyabeanus ATCC 44560 v1.0 32 28 No Cochliobolus victoriae FI3 v1.0 31 27 No Cochliobolus carbonum 26-R-13 v1.0 31 27 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 30 26 No Alternaria brassicicola 28 24 No Cochliobolus lunatus m118 v2.0 31 27 No Pyrenophora teres f. teres 22 31 27 No Pyrenophora tritici-repentis 29 25 No Stagonospora nodorum 30 26 No Mycosphaerella graminicola IPO323 30 26 No Zasmidium cellare ATCC 36951 v1.0 30 26 No Dothistroma septosporum 31 27 No Septoria musiva v1.0 34 30 No Mycosphaerella fijiensis CIRAD86 27 23 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 32 28 No Paracoccidioides brasiliensis Pb18 27 25 No Coccidioides posadasii RMSCC 3488 32 28 No Coccidioides immitis RS 36 31 No Ajellomyces dermatitidis SLH14081 30 26 No Histoplasma capsulatum class NAmI strain WU24 30 26 No Microsporum canis CBS 113480 29 25 No Trichophyton equinum CBS 127.97 26 22 No Trichophyton verrucosum HKI 0517 26 24 No Arthroderma benhamiae CBS 112371 29 25 No Trichophyton tonsurans CBS 112818 29 25 No Trichophyton rubrum CBS 118892 28 24 No Uncinocarpus reesii 1704 27 23 No Aspergillus zonatus v1.0 34 30 No Penicillium chrysogenum Wisconsin 54-1255 33 29 No Penicillium chrysogenum v1.0 30 26 No Aspergillus acidus v1.0 33 29 No Aspergillus fumigatus Af293 31 27 No Aspergillus brasiliensis v1.0 33 29 No Aspergillus nidulans FGSC A4 31 27 No Aspergillus sydowii v1.0 35 30 No Aspergillus versicolor v1.0 34 30 No Aspergillus glaucus 31 27 No Aspergillus carbonarius ITEM 5010 32 28 No Neosartorya fischeri NRRL 181 31 27 No Aspergillus terreus NIH2624 32 28 No Aspergillus tubingensis v1.0 33 29 No Aspergillus wentii v1.0 33 28 No Aspergillus oryzae RIB40 30 26 No Aspergillus niger 22 32 28 No Aspergillus niger ATCC 1015 21 19 No Aspergillus flavus NRRL3357 34 30 No Aspergillus clavatus NRRL 1 29 26 No Penicillium marneffei ATCC 18224 34 30 No Tuber melanosporum Mel28 22 30 26 No Tuber melanosporum Vittad Perigord truffle 30 26 No Hansenula polymorpha v2.0 23 19 No Dekkera bruxellensis CBS 2499 v2.0 23 19 No Pichia membranifaciens v1.0 22 18 No Candida tanzawaensis NRRL Y-17324 v1.0 22 18 No Candida dubliniensis CD36 23 19 No Candida tropicalis MYA-3404 20 17 No Candida parapsilosis 20 17 No Candida albicans SC5314 22 18 No Lodderomyces elongisporus NRRL YB-4239 21 17 No Babjeviella inositovora NRRL Y-12698 v1.0 23 19 No Pichia stipitis CBS 6054 22 18 No Candida guilliermondii ATCC 6260 19 16 No Hyphopichia burtonii NRRL Y-1933 v1.0 22 18 No Debaromyces hansenii 23 19 No Wickerhamomyces anomalus 24 19 No Pichia pastoris GS115 23 19 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 19 15 No Yarrowia lipolytica CLIB122 26 22 No Candida lusitaniae ATCC 42720 22 18 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 23 19 No Vanderwaltozyma polyspora DSM 70294 24 19 No Candida glabrata CBS138 22 18 No Kluyveromyces thermotolerans CBS 6340 20 16 No Lachancea kluyveri 21 17 No Kluyveromyces waltii 20 16 No Ashbya gossypii ATCC 10895 21 17 No Zygosaccharomyces rouxii 21 17 No Saccharomyces mikatae MIT 20 17 No Saccharomyces paradoxus MIT 21 17 No Saccharomyces cerevisiae 76 Baker's yeast 22 18 No Saccharomyces bayanus MIT 23 19 No Kluyveromyces lactis 21 17 No Schizosaccharomyces cryophilus OY26 22 27 22 No Schizosaccharomyces octosporus yFS286 26 20 No Schizosaccharomyces japonicus yFS275 27 21 No Schizosaccharomyces pombe Fission yeast 27 21 No Catenaria anguillulae PL171 v1.0 53 46 No Allomyces macrogynus ATCC 38327 109 93 No Spizellomyces punctatus DAOM BR117 65 56 No Dictyostelium discoideum 78 74 No Dictyostelium purpureum 77 73 No Entamoeba dispar 1.2 66 54 No Entamoeba invadens 1.2 103 88 No Entamoeba histolytica 1 66 54 No Selaginella moellendorffii 235 221 No Pinus taeda Loblolly pine 208 191 No Picea abies Norway spruce 124 121 No Eucalyptus grandis v201 Rose gum 316 303 No Theobroma cacao B97-61/B2 v1 Cacao 174 163 No Gossypium raimondii v221 607 558 No Citrus clementina v165 264 254 No Citrus sinensis v154 Sweet orange 315 294 No Thellungiella halophila v173 223 207 No Brassica rapa Chiifu-401 1.2 Field mustard 318 300 No Capsella rubella v183 204 192 No Arabidopsis lyrata Lyrate rockcress 207 196 No Arabidopsis thaliana 10 Thale cress 273 253 No Carica papaya Papaya 144 141 No Medicago truncatula Barrel medic 338 323 No Phaseolus vulgaris v186 French bean 234 221 No Glycine max v109 Soybean 449 425 No Cucumis sativus v122 Cucumber 224 208 No Fragaria vesca Wild strawberry 171 157 No Malus domestica v196 Apple 393 373 No Prunus persica v139 Peach 179 170 No Linum usitatissimum v200 Flax 325 302 No Manihot esculenta v147 Cassava 269 254 No Populus trichocarpa v156 Black cottonwood 306 285 No Vitis vinifera Wine grape 156 148 No Mimulus guttatus v140 Spotted monkey flower 219 208 No Solanum lycopersicum v.2.3 Tomato 212 203 No Solanum tuberosum Potato 256 252 No Actinidia chinensis Hongyang 274 257 No Aquilegia coerulea v195 255 237 No Triticum urartu 22 160 152 No Triticum aestivum 22 Bread wheat 473 453 No Aegilops tauschii 22 165 158 No Brachypodium distachyon Stiff brome 229 215 No Oryza barthii 22 African wild rice 244 234 No Oryza meridionalis 22 226 214 No Oryza glumaepatula 22 270 260 No Oryza glaberrima African rice 168 159 No Oryza punctata 22 264 248 No Oryza nivara 22 260 247 No Oryza brachyantha 22 Malo sina 186 178 No Oryza sativa ssp. japonica 5.0 Japanese rice 257 243 No Oryza sativa v193 Rice 256 242 No Phyllostachys heterocycla var. pubescens Kikko-chiku 226 208 No Panicum virgatum v202 Switchgrass 374 356 No Setaria italica v164 Foxtail millet 223 208 No Zea mays subsp. mays Maize 407 385 No Zea mays v181 Maize 431 407 No Sorghum bicolor Sorghum 182 173 No Musa balbisiana Balbis banana 261 245 No Musa acuminata 22 Wild Malaysian banana 249 236 No Amborella trichopoda 22 111 107 No Physcomitrella patens 170 156 No Coccomyxa subellipsoidea sp. C-169 v2 51 43 No Asterochloris sp. Cgr/DA1pho v1.0 58 52 No Chlorella variabilis sp. NC64A 53 50 No Chlorella vulgaris 48 44 No Volvox carteri f. nagariensis 118 104 No Volvox carteri v199 110 98 No Chlamydomonas reinhardtii 4.0 128 116 No Ostreococcus sp. RCC809 44 38 No Ostreococcus lucimarinus CCE9901 43 39 No Ostreococcus tauri 44 38 No Bathycoccus prasinos 49 44 No Micromonas sp. RCC299 98 85 No Micromonas pusilla CCMP1545 v3.0 138 115 No Cyanidioschyzon merolae strain 10D 22 13 12 No Cyanidioschyzon merolae 13 12 No Porphyridium purpureum 02_2012 76 62 No Thecamonas trahens ATCC 50062 188 169 No Bigelowiella natans CCMP2755 22 399 364 No Giardia lamblia 2.3 30 28 No Cyanophora paradoxa 103 101 No Leishmania mexicana 2.4 68 64 No Leishmania major strain Friedlin 71 66 No Leishmania infantum JPCM5 2.4 70 65 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 71 67 No Trypanosoma vivax 78 73 No Trypanosoma cruzi strain CL Brener 85 76 No Trypanosoma congolense 2.4 94 87 No Trypanosoma brucei gambiense v4.1 91 84 No Trypanosoma brucei TREU927 v4.1 92 84 No Ectocarpus siliculosus 250 211 No Aureococcus anophagefferens 291 254 No Albugo laibachii 22 151 104 No Pythium iwayamai DAOM BR242034 22 224 177 No Pythium arrhenomanes ATCC 12531 22 209 160 No Pythium ultimum v1.7-2 221 165 No Pythium aphanidermatum DAOM BR444 22 208 157 No Pythium irregulare DAOM BR486 22 235 174 No Pythium vexans DAOM BR484 22 204 158 No Phytophthora ramorum 1.1 Sudden oak death agent 201 159 No Phytophthora sojae 1.1 212 170 No Phytophthora infestans T30-4 238 187 No Phytophthora capsici 161 136 No Hyaloperonospora arabidopsidis 22 60 45 No Phaeodactylum tricornutum CCAP 1055/1 72 69 No Fragilariopsis cylindrus 124 123 No Thalassiosira pseudonana CCMP1335 86 81 No Perkinsus marinus ATCC 50983 255 232 No Paramecium tetraurelia 882 768 No Tetrahymena thermophila SB210 1 365 274 No Ichthyophthirius multifiliis strain G5 234 177 No Cryptosporidium hominis 37 35 No Cryptosporidium muris 46 42 No Cryptosporidium parvum Iowa II 45 42 No Neospora caninum 72 63 No Toxoplasma gondii VEG 65 60 No Toxoplasma gondii ME49 66 61 No Toxoplasma gondii GT1 64 60 No Babesia bovis T2Bo 54 50 No Theileria parva 28 26 No Theileria annulata 31 29 No Plasmodium falciparum 3D7 73 70 No Plasmodium vivax SaI-1 7.0 44 40 No Plasmodium knowlesi strain H 43 41 No Plasmodium yoelii ssp. yoelii 1 39 37 No Plasmodium chabaudi 47 42 No Plasmodium berghei ANKA 45 41 No Symbiodinium minutum clade B1 v1.2 1493 1347 No Naegleria gruberi 123 112 No Trichomonas vaginalis 174 149 No Guillardia theta CCMP2712 v1.0 419 390 No Emiliania huxleyi CCMP1516 320 314 No Leptolyngbya sp. PCC 7376 1 1 No Acaryochloris marina MBIC11017 2 2 No Synechocystis sp. PCC 6803 1 1 No Thermosynechococcus sp. NK55 1 1 No Thermosynechococcus elongatus BP-1 1 1 No Synechococcus sp. PCC 7502 1 1 No Synechococcus sp. PCC 6312 2 2 No Synechococcus sp. CC9311 3 3 No Synechococcus elongatus PCC 7942 1 1 No Microcoleus sp. PCC 7113 4 4 No Trichodesmium erythraeum IMS101 2 2 No Geitlerinema sp. PCC 7407 1 1 No Cyanothece sp. PCC 8802 2 2 No cyanobacterium UCYN-A 1 1 No Microcystis aeruginosa NIES-843 3 3 No Gloeobacter violaceus PCC 7421 1 1 No Rivularia sp. PCC 7116 1 1 No Calothrix sp. PCC 7507 2 2 No Anabaena variabilis ATCC 29413 1 1 No Nostoc sp. PCC 7107 1 1 No Nostoc punctiforme PCC 73102 2 2 No Nostoc sp. PCC 7120 1 1 No Mycoplasma wenyonii str. Massachusetts 1 1 No Slackia heliotrinireducens DSM 20476 1 1 No Catenulispora acidiphila DSM 44928 3 3 No Stackebrandtia nassauensis DSM 44728 2 2 No Frankia symbiont of Datisca glomerata 1 1 No Thermobifida fusca YX 1 1 No Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 4 4 No Thermomonospora curvata DSM 43183 3 3 No Streptosporangium roseum DSM 43021 2 2 No Kitasatospora setae KM-6054 10 10 No Streptomyces coelicolor A3(2) 4 4 No Streptomyces sp. PAMC26508 2 2 No Streptomyces flavogriseus ATCC 33331 2 2 No Streptomyces sp. SirexAA-E 2 2 No Streptomyces griseus subsp. griseus NBRC 13350 3 3 No Streptomyces bingchenggensis BCW-1 1 1 No Streptomyces violaceusniger Tu 4113 3 3 No Streptomyces avermitilis MA-4680 2 2 No Streptomyces cattleya NRRL 8057 = DSM 46488 2 2 No Streptomyces scabiei 87.22 2 2 No Streptomyces hygroscopicus subsp. jinggangensis 5008 5 5 No Actinosynnema mirum DSM 43827 3 3 No Saccharopolyspora erythraea NRRL 2338 2 2 No Amycolatopsis mediterranei U32 1 1 No Actinoplanes sp. N902-109 1 1 No Deinococcus deserti VCD115 1 1 No Ruminococcus albus 7 3 3 No Oscillibacter valericigenes Sjm18-20 1 1 No Desulfotomaculum acetoxidans DSM 771 1 1 No Desulfotomaculum ruminis DSM 2154 1 1 No Bacillus weihenstephanensis KBAB4 2 1 No Bacillus thuringiensis str. Al Hakam 1 1 No Bacillus cereus 03BB102 1 1 No Bacillus anthracis str. A0248 1 1 No Staphylococcus pseudintermedius HKU10-03 1 1 No Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1 No Staphylococcus lugdunensis HKU09-01 1 1 No Staphylococcus haemolyticus JCSC1435 1 1 No Staphylococcus carnosus subsp. carnosus TM300 1 1 No Staphylococcus aureus subsp. aureus JH1 1 1 No Saprospira grandis str. Lewin 2 2 No Chitinophaga pinensis DSM 2588 1 1 No Krokinobacter sp. 4H-3-7-5 2 2 No Lacinutrix sp. 5H-3-7-4 4 4 No Maribacter sp. HTCC2170 2 2 No Zobellia galactanivorans 3 3 No Cellulophaga algicola DSM 14237 3 3 No Cellulophaga lytica DSM 7489 1 1 No Polaribacter sp. MED152 3 3 No Planctomyces brasiliensis DSM 5305 14 12 No Planctomyces limnophilus DSM 3776 6 5 No Rhodopirellula baltica SH 1 9 8 No Pirellula staleyi DSM 6068 13 8 No Coraliomargarita akajimensis DSM 45221 1 1 No Opitutus terrae PB90-1 1 1 No Akkermansia muciniphila ATCC BAA-835 1 1 No Turneriella parva DSM 21527 1 1 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1 1 No Denitrovibrio acetiphilus DSM 12809 1 1 No Candidatus Solibacter usitatus Ellin6076 1 1 No Terriglobus saanensis SP1PR4 3 1 No Terriglobus roseus DSM 18391 2 1 No Thermodesulfovibrio yellowstonii DSM 11347 1 1 No Candidatus Methylomirabilis oxyfera 1 1 No Bdellovibrio bacteriovorus HD100 3 3 No Sulfurospirillum deleyianum DSM 6946 2 2 No Sulfurospirillum barnesii SES-3 3 2 No Arcobacter sp. L 2 2 No Arcobacter nitrofigilis DSM 7299 1 1 No Arcobacter butzleri RM4018 1 1 No Campylobacter concisus 13826 1 1 No uncultured Sulfuricurvum sp. RIFRC-1 1 1 No Sulfuricurvum kujiense DSM 16994 2 2 No Sulfurimonas denitrificans DSM 1251 1 1 No Wolinella succinogenes DSM 1740 1 1 No Helicobacter cinaedi PAGU611 1 1 No Desulfarculus baarsii DSM 2075 1 1 No Desulfobacca acetoxidans DSM 11109 1 1 No Syntrophobacter fumaroxidans MPOB 5 5 No Desulfotalea psychrophila LSv54 1 1 No Desulfatibacillum alkenivorans AK-01 2 2 No Desulfobacterium autotrophicum HRM2 3 3 No Desulfovibrio piezophilus 4 4 No Desulfovibrio aespoeensis Aspo-2 2 2 No Lawsonia intracellularis PHE/MN1-00 1 1 No Desulfovibrio magneticus RS-1 5 5 No Desulfovibrio alaskensis G20 1 1 No Desulfovibrio vulgaris subsp. vulgaris DP4 2 2 No Desulfovibrio salexigens DSM 2638 5 5 No Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1 1 No Desulfovibrio africanus str. Walvis Bay 18 16 No Geobacter lovleyi SZ 3 3 No Geobacter sulfurreducens KN400 1 1 No Pelobacter propionicus DSM 2379 2 2 No Pelobacter carbinolicus DSM 2380 1 1 No Haliangium ochraceum DSM 14365 1 1 No Sorangium cellulosum 'So ce 56' 4 4 No Stigmatella aurantiaca DW4/3-1 2 2 No Myxococcus xanthus DK 1622 1 1 No Myxococcus fulvus HW-1 1 1 No Dechloromonas aromatica RCB 1 1 No Azoarcus sp. KH32C 2 2 No Azoarcus sp. BH72 1 1 No Aromatoleum aromaticum EbN1 1 1 No Dechlorosoma suillum PS 1 1 No Pseudogulbenkiania sp. NH8B 1 1 No Laribacter hongkongensis HLHK9 2 1 No beta proteobacterium CB 1 1 No Methylibium petroleiphilum PM1 2 2 No Rubrivivax gelatinosus IL144 1 1 No Burkholderia phytofirmans PsJN 2 2 No Burkholderia phymatum STM815 1 1 No Burkholderia xenovorans LB400 1 1 No Ralstonia eutropha JMP134 3 3 No Cupriavidus taiwanensis LMG 19424 4 4 No Cupriavidus metallidurans CH34 4 4 No Cupriavidus necator N-1 3 3 No Ralstonia eutropha H16 2 2 No Ralstonia pickettii 12D 1 1 No Ralstonia solanacearum CFBP2957 1 1 No Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 1 1 No Burkholderia sp. RPE64 1 1 No Burkholderia sp. CCGE1002 1 1 No Burkholderia ambifaria AMMD 1 1 No Burkholderia cenocepacia HI2424 1 1 No Burkholderia multivorans ATCC 17616 1 1 No Burkholderia vietnamiensis G4 1 1 No Burkholderia gladioli BSR3 2 2 No Verminephrobacter eiseniae EF01-2 1 1 No Ramlibacter tataouinensis TTB310 3 3 No Delftia sp. Cs1-4 3 3 No Delftia acidovorans SPH-1 3 3 No Polaromonas sp. JS666 2 2 No Polaromonas naphthalenivorans CJ2 1 1 No Acidovorax ebreus TPSY 3 3 No Acidovorax sp. KKS102 4 4 No Acidovorax sp. JS42 2 2 No Acidovorax citrulli AAC00-1 3 3 No Acidovorax avenae subsp. avenae ATCC 19860 4 4 No Comamonas testosteroni CNB-2 2 2 No Pusillimonas sp. T7-7 1 1 No Advenella kashmirensis WT001 1 1 No Bordetella avium 197N 1 1 No Bordetella parapertussis 12822 1 1 No Bordetella bronchiseptica RB50 1 1 No Achromobacter xylosoxidans 1 1 No Thiobacillus denitrificans ATCC 25259 1 1 No Nitrosospira multiformis ATCC 25196 3 3 No Nitrosomonas sp. Is79A3 3 2 No Sideroxydans lithotrophicus ES-1 1 1 No Gallionella capsiferriformans ES-2 2 2 No Methylotenera versatilis 301 7 7 No Methylotenera mobilis JLW8 2 2 No Methylovorus sp. MP688 8 8 No Methylovorus glucosetrophus SIP3-4 8 8 No Methylobacillus flagellatus KT 3 3 No Magnetococcus marinus MC-1 2 2 No Parvularcula bermudensis HTCC2503 5 4 No Asticcacaulis excentricus CB 48 8 8 No Brevundimonas subvibrioides ATCC 15264 3 3 No Caulobacter sp. K31 5 5 No Caulobacter crescentus NA1000 4 4 No Caulobacter segnis ATCC 21756 7 6 No Phenylobacterium zucineum HLK1 2 2 No Erythrobacter litoralis HTCC2594 4 4 No Sphingopyxis alaskensis RB2256 3 3 No Novosphingobium sp. PP1Y 1 1 No Novosphingobium aromaticivorans DSM 12444 2 2 No Sphingobium sp. SYK-6 4 4 No Sphingobium japonicum UT26S 4 4 No Sphingobium chlorophenolicum L-1 5 5 No Sphingomonas sp. MM-1 5 5 No Sphingomonas wittichii RW1 6 6 No Zymomonas mobilis subsp. mobilis NCIMB 11163 2 2 No Maricaulis maris MCS10 4 4 No Hirschia baltica ATCC 49814 4 4 No Hyphomonas neptunium ATCC 15444 3 3 No Dinoroseobacter shibae DFL 12 5 5 No Phaeobacter gallaeciensis 2.10 1 1 No Pseudovibrio sp. FO-BEG1 3 2 No Jannaschia sp. CCS1 5 5 No Ruegeria sp. TM1040 5 5 No Ruegeria pomeroyi DSS-3 3 3 No Ketogulonicigenium vulgare Y25 1 1 No Ketogulonigenium vulgarum WSH-001 1 1 No Roseobacter litoralis Och 149 6 6 No Roseobacter denitrificans OCh 114 2 2 No Rhodobacter sphaeroides ATCC 17029 3 3 No Rhodobacter capsulatus SB 1003 3 3 No Rhodospirillum photometricum DSM 122 3 3 No Tistrella mobilis KA081020-065 2 2 No Magnetospirillum magneticum AMB-1 3 3 No Rhodospirillum centenum SW 4 4 No Rhodospirillum rubrum F11 1 1 No Azospirillum lipoferum 4B 1 1 No Azospirillum brasilense Sp245 1 1 No Granulibacter bethesdensis CGDNIH1 1 1 No Acetobacter pasteurianus IFO 3283-01 1 1 No Polymorphum gilvum SL003B-26A1 2 1 No Micavibrio aeruginosavorus ARL-13 3 3 No Candidatus Puniceispirillum marinum IMCC1322 1 1 No Candidatus Pelagibacter sp. IMCC9063 1 1 No Xanthobacter autotrophicus Py2 1 1 No Methylobacterium chloromethanicum CM4 1 1 No Methylobacterium extorquens AM1 4 4 No Methylobacterium sp. 4-46 2 2 No Methylobacterium populi BJ001 1 1 No Methylobacterium nodulans ORS 2060 3 3 No Methylobacterium radiotolerans JCM 2831 2 2 No Parvibaculum lavamentivorans DS-1 2 1 No Ochrobactrum anthropi ATCC 49188 1 1 No Brucella microti CCM 4915 1 1 No Brucella pinnipedialis B2/94 1 1 No Brucella canis ATCC 23365 1 1 No Brucella suis ATCC 23445 1 1 No Brucella melitensis ATCC 23457 1 1 No Brucella ovis ATCC 25840 1 1 No Brucella abortus S19 1 1 No Sinorhizobium fredii NGR234 1 1 No Sinorhizobium medicae WSM419 3 3 No Sinorhizobium meliloti AK83 2 2 No Genome sequence of Rhizobium sp. strain IRBG74 1 1 No Rhizobium etli CIAT 652 2 2 No Rhizobium leguminosarum bv. viciae 3841 6 6 No Agrobacterium tumefaciens str. C58 1 1 No Agrobacterium radiobacter K84 2 2 No Agrobacterium sp. H13-3 1 1 No Agrobacterium vitis S4 2 2 No Mesorhizobium sp. BNC1 3 3 No Mesorhizobium opportunistum WSM2075 4 4 No Mesorhizobium ciceri biovar biserrulae WSM1271 2 2 No Mesorhizobium loti MAFF303099 2 2 No Methylocella silvestris BL2 2 2 No Beijerinckia indica subsp. indica ATCC 9039 1 1 No Pelagibacterium halotolerans B2 2 2 No Rhodomicrobium vannielii ATCC 17100 1 1 No Hyphomicrobium sp. MC1 4 4 No Hyphomicrobium denitrificans ATCC 51888 3 3 No Oligotropha carboxidovorans OM4 2 2 No Rhodopseudomonas palustris BisA53 3 3 No Bradyrhizobium japonicum USDA 110 4 4 No Bradyrhizobium sp. ORS 278 2 2 No Methylocystis sp. SC2 2 2 No Saccharophagus degradans 2-40 1 1 No Teredinibacter turnerae T7901 1 1 No Cellvibrio japonicus Ueda107 2 1 No Tolumonas auensis DSM 9187 1 1 No Vibrio furnissii NCTC 11218 1 1 No Psychromonas ingrahamii 37 2 2 No Shewanella halifaxensis HAW-EB4 2 2 No Shewanella sediminis HAW-EB3 1 1 No Shewanella woodyi ATCC 51908 1 1 No Shewanella frigidimarina NCIMB 400 1 1 No Colwellia psychrerythraea 34H 4 4 No Pseudoalteromonas sp. SM9913 12 12 No Pseudoalteromonas atlantica T6c 5 5 No Pseudoalteromonas haloplanktis TAC125 12 12 No Glaciecola sp. 4H-3-7+YE-5 5 5 No Glaciecola nitratireducens FR1064 3 3 No Alteromonas sp. SN2 5 5 No Alteromonas macleodii str. 'Deep ecotype' 4 4 No Kangiella koreensis DSM 16069 1 1 No Hahella chejuensis KCTC 2396 5 5 No Marinomonas mediterranea MMB-1 1 1 No Halomonas elongata DSM 2581 6 1 No Methylomicrobium alcaliphilum 1 1 No Methylomonas methanica MC09 1 1 No Rhodanobacter denitrificans 1 1 No Pseudoxanthomonas spadix BD-a59 8 8 No Pseudoxanthomonas suwonensis 11-1 6 6 No Stenotrophomonas maltophilia K279a 6 6 No Xylella fastidiosa M23 1 1 No Xanthomonas axonopodis pv. citri str. 306 6 6 No Xanthomonas albilineans GPE PC73 4 4 No Xanthomonas oryzae pv. oryzae PXO99A 5 5 No Xanthomonas campestris pv. campestris str. B100 4 4 No Spiribacter sp. UAH-SP71 1 1 No Allochromatium vinosum DSM 180 2 2 No Thiocystis violascens DSM 198 2 2 No Nitrosococcus watsonii C-113 2 2 No Nitrosococcus halophilus Nc4 6 6 No Nitrosococcus oceani ATCC 19707 2 2 No gamma proteobacterium HdN1 1 1 No Azotobacter vinelandii DJ 1 1 No Pseudomonas sp. TKP 1 1 No Pseudomonas sp. UW4 1 1 No Pseudomonas brassicacearum subsp. brassicacearum NFM421 2 1 No Pseudomonas entomophila L48 1 1 No Pseudomonas putida F1 1 1 No Pseudomonas protegens Pf-5 1 1 No Pseudomonas sp. VLB120 1 1 No Acinetobacter oleivorans DR1 1 1 No Acinetobacter calcoaceticus PHEA-2 1 1 No Thiomicrospira crunogena XCL-2 1 1 No Francisella noatunensis subsp. orientalis str. Toba 04 1 1 No Francisella philomiragia subsp. philomiragia ATCC 25017 1 1 No Francisella tularensis subsp. tularensis WY96-3418 1 1 No Francisella novicida U112 1 1 No Pyrobaculum sp. 1860 1 1 No Thermoproteus uzoniensis 768-20 1 1 No Methanohalobium evestigatum Z-7303 3 3 No Thermococcus gammatolerans EJ3 1 1 No Haloquadratum walsbyi DSM 16790 1 1 No Methanobrevibacter sp. AbM4 1 1 No Methanobrevibacter ruminantium M1 3 3 No Methanobrevibacter smithii ATCC 35061 2 2 No Aciduliprofundum boonei T469 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 560 479 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 271 220 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 150 130 No Ascaris suum Victoria/Ghent Pig roundworm 128 112 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 179 151 No Cryptococcus neoformans var. grubii H99 29 25 No Cryptococcus neoformans B-3501A 29 25 No Cryptococcus neoformans JEC21 27 23 No Paracoccidioides brasiliensis Pb01 30 26 No Paracoccidioides brasiliensis Pb03 29 25 No Coccidioides posadasii str. Silveira 29 25 No Coccidioides immitis RMSCC 3703 29 25 No Coccidioides immitis RMSCC 2394 29 25 No Coccidioides immitis H538.4 28 25 No Ajellomyces dermatitidis ER-3 30 26 No Histoplasma capsulatum H143 29 26 No Histoplasma capsulatum H88 30 26 No Histoplasma capsulatum G186AR 29 25 No Aspergillus fumigatus A1163 31 27 No Candida albicans WO-1 22 18 No Saccharomyces cerevisiae UC5 19 15 No Saccharomyces cerevisiae PW5 18 16 No Saccharomyces cerevisiae FL100 9 9 No Saccharomyces cerevisiae CLIB324 7 6 No Saccharomyces cerevisiae CBS7960 13 12 No Saccharomyces cerevisiae YJM269 13 12 No Saccharomyces cerevisiae T7 22 18 No Saccharomyces cerevisiae FostersB 18 16 No Saccharomyces cerevisiae FostersO 15 15 No Saccharomyces cerevisiae VL3 16 16 No Saccharomyces cerevisiae Vin13 16 14 No Saccharomyces cerevisiae LalvinQA23 16 14 No Saccharomyces cerevisiae AWRI796 21 17 No Saccharomyces cerevisiae Sigma1278b 22 18 No Saccharomyces cerevisiae W303 22 18 No Saccharomyces cerevisiae JAY291 22 18 No Saccharomyces cerevisiae AWRI1631 15 13 No Saccharomyces cerevisiae YPS163 10 9 No Saccharomyces cerevisiae M22 11 9 No Saccharomyces cerevisiae T73 8 7 No Saccharomyces cerevisiae CLIB215 12 11 No Saccharomyces cerevisiae Y10 7 6 No Saccharomyces cerevisiae YJM789 22 18 No Saccharomyces cerevisiae YJM789 20 17 No Saccharomyces cerevisiae RM11-1a 21 17 No Saccharomyces cerevisiae RM11-1a 21 17 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 22 18 No Schizosaccharomyces pombe 972h- 27 21 No Batrachochytrium dendrobatidis JEL423 54 47 No Batrachochytrium dendrobatidis JAM81 54 46 No Theobroma cacao Matina 1-6 v0.9 Cacao 177 166 No Hordeum vulgare 22 Domesticated barley 288 278 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 206 196 No Trypanosoma brucei Lister 427 v4.1 92 84 No Neospora caninum Nc-Liverpool 6.2 72 63 No Plasmodium falciparum HB3 55 53 No Plasmodium falciparum Dd2 42 40 No Synechocystis sp. PCC 6803 substr. PCC-P 1 1 No Synechocystis sp. PCC 6803 substr. PCC-N 1 1 No Synechocystis sp. PCC 6803 substr. GT-I 1 1 No Synechocystis sp. PCC 6803 1 1 No Cyanobium gracile PCC 6307 2 2 No Synechococcus sp. JA-2-3B'a(2-13) 1 1 No Synechococcus sp. JA-3-3Ab 1 1 No Synechococcus sp. CC9902 1 1 No Synechococcus sp. RCC307 2 2 No Synechococcus sp. CC9605 3 3 No Synechococcus sp. WH 8102 2 2 No Synechococcus sp. WH 7803 2 2 No Synechococcus elongatus PCC 6301 1 1 No Prochlorococcus marinus str. AS9601 1 1 No Prochlorococcus marinus str. MIT 9313 2 2 No Prochlorococcus marinus str. MIT 9303 2 2 No Crinalium epipsammum PCC 9333 4 4 No Oscillatoria nigro-viridis PCC 7112 1 1 No Cyanothece sp. PCC 7822 1 1 No Cyanothece sp. PCC 7425 3 3 No Cyanothece sp. PCC 7424 2 2 No Cyanothece sp. ATCC 51142 4 4 No Cyanothece sp. PCC 8801 2 2 No Cyanobacterium aponinum PCC 10605 1 1 No Cyanobacterium stanieri PCC 7202 1 1 No Pleurocapsa minor Pleurocapsa sp. PCC 7327 1 1 No Calothrix parietina Calothrix sp. PCC 6303 1 1 No Cylindrospermum stagnale PCC 7417 5 5 No Mycoplasma ovis str. Michigan 1 1 No Mycoplasma cynos C142 1 1 No Candidatus Mycoplasma haemolamae str. Purdue 1 1 No Nocardiopsis alba ATCC BAA-2165 3 3 No Streptomyces albus J1074 2 2 No Streptomyces rapamycinicus NRRL 5491 5 5 No Streptomyces davawensis JCM 4913 2 2 No Streptomyces fulvissimus DSM 40593 5 5 No Streptomyces venezuelae ATCC 10712 3 3 No Streptomyces collinus Tu 365 5 5 No Streptomyces cattleya NRRL 8057 = DSM 46488 2 2 No Streptomyces hygroscopicus subsp. jinggangensis TL01 5 5 No Saccharothrix espanaensis DSM 44229 10 10 No Amycolatopsis mediterranei RB 1 1 No Amycolatopsis mediterranei S699 1 1 No Amycolatopsis mediterranei S699 1 1 No Amycolatopsis orientalis HCCB10007 2 2 No Nocardia brasiliensis ATCC 700358 4 4 No Deinococcus peraridilitoris DSM 19664 1 1 No Thermacetogenium phaeum DSM 12270 1 1 No Streptococcus oligofermentans AS 1.3089 1 1 No Exiguobacterium antarcticum B7 1 1 No Bacillus toyonensis BCT-7112 1 1 No Bacillus thuringiensis HD-771 1 1 No Bacillus thuringiensis HD-789 1 1 No Bacillus thuringiensis MC28 1 1 No Bacillus thuringiensis YBT-1518 1 1 No Bacillus thuringiensis Bt407 1 1 No Bacillus thuringiensis BMB171 1 1 No Bacillus thuringiensis serovar finitimus YBT-020 2 1 No Bacillus thuringiensis serovar thuringiensis str. IS5056 1 1 No Bacillus cereus FRI-35 1 1 No Bacillus cereus biovar anthracis str. CI 1 1 No Bacillus cereus AH820 1 1 No Bacillus cereus AH187 1 1 No Bacillus cereus B4264 1 1 No Bacillus cereus Q1 1 1 No Bacillus cereus F837/76 1 1 No Bacillus cereus NC7401 1 1 No Bacillus cereus E33L 1 1 No Bacillus cereus ATCC 14579 1 1 No Bacillus cereus ATCC 10987 1 1 No Bacillus anthracis str. H9401 1 1 No Bacillus anthracis str. CDC 684 1 1 No Bacillus anthracis str. 'Ames Ancestor' 1 1 No Bacillus anthracis str. Sterne 1 1 No Bacillus anthracis str. Ames 1 1 No Staphylococcus aureus subsp. aureus MSHR1132 1 1 No Staphylococcus pseudintermedius ED99 1 1 No Staphylococcus pasteuri SP1 1 1 No Staphylococcus lugdunensis N920143 1 1 No Staphylococcus warneri SG1 1 1 No Staphylococcus epidermidis ATCC 12228 1 1 No Staphylococcus aureus CA-347 1 1 No Staphylococcus aureus Bmb9393 1 1 No Staphylococcus aureus M1 2 2 No Staphylococcus aureus 08BA02176 1 1 No Staphylococcus aureus 04-02981 1 1 No Staphylococcus aureus RF122 1 1 No Staphylococcus aureus subsp. aureus Z172 1 1 No Staphylococcus aureus subsp. aureus 6850 1 1 No Staphylococcus aureus subsp. aureus SA957 1 1 No Staphylococcus aureus subsp. aureus SA40 1 1 No Staphylococcus aureus subsp. aureus 11819-97 1 1 No Staphylococcus aureus subsp. aureus M013 1 1 No Staphylococcus aureus subsp. aureus HO 5096 0412 1 1 No Staphylococcus aureus subsp. aureus VC40 1 1 No Staphylococcus aureus subsp. aureus T0131 1 1 No Staphylococcus aureus subsp. aureus LGA251 1 1 No Staphylococcus aureus subsp. aureus ECT-R 2 1 1 No Staphylococcus aureus subsp. aureus JKD6159 1 1 No Staphylococcus aureus subsp. aureus ED133 1 1 No Staphylococcus aureus subsp. aureus ED98 1 1 No Staphylococcus aureus subsp. aureus TW20 1 1 No Staphylococcus aureus subsp. aureus str. JKD6008 1 1 No Staphylococcus aureus subsp. aureus S0385 1 1 No Staphylococcus aureus subsp. aureus Mu3 1 1 No Staphylococcus aureus subsp. aureus USA300_TCH1516 1 1 No Staphylococcus aureus subsp. aureus USA300_FPR3757 1 1 No Staphylococcus aureus subsp. aureus JH9 1 1 No Staphylococcus aureus subsp. aureus MSSA476 1 1 No Staphylococcus aureus subsp. aureus MRSA252 1 1 No Staphylococcus aureus subsp. aureus MW2 1 1 No Staphylococcus aureus subsp. aureus N315 1 1 No Staphylococcus aureus subsp. aureus Mu50 1 1 No Staphylococcus aureus subsp. aureus COL 1 1 No Staphylococcus aureus subsp. aureus NCTC 8325 1 1 No Nonlabens dokdonensis DSW-6 1 1 No Singulisphaera acidiphila DSM 18658 8 5 No Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1 1 No Bdellovibrio exovorus JSS 2 2 No Bdellovibrio bacteriovorus str. Tiberius 3 3 No Arcobacter butzleri 7h1h 2 1 No Desulfocapsa sulfexigens DSM 10523 2 2 No Lawsonia intracellularis N343 1 1 No Desulfovibrio hydrothermalis AM13 = DSM 14728 4 4 No Desulfovibrio vulgaris RCH1 2 2 No Desulfovibrio vulgaris str. 'Miyazaki F' 4 4 No Desulfovibrio vulgaris str. Hildenborough 2 2 No Desulfovibrio gigas DSM 1382 = ATCC 19364 5 5 No Desulfovibrio desulfuricans ND132 3 3 No Geobacter sulfurreducens PCA 2 2 No Sorangium cellulosum So0157-2 8 7 No Myxococcus stipitatus DSM 14675 1 1 No Burkholderia phenoliruptrix BR3459a 1 1 No Pandoraea pnomenusa 3kgm 1 1 No Ralstonia pickettii 12J 1 1 No Ralstonia solanacearum FQY_4 1 1 No Ralstonia solanacearum Po82 1 1 No Ralstonia solanacearum PSI07 1 1 No Ralstonia solanacearum CMR15 1 1 No Ralstonia solanacearum GMI1000 2 2 No Burkholderia sp. YI23 1 1 No Burkholderia sp. CCGE1003 1 1 No Burkholderia sp. CCGE1001 1 1 No Burkholderia sp. KJ006 1 1 No Burkholderia thailandensis MSMB121 1 1 No Burkholderia lata 1 1 No Burkholderia ambifaria MC40-6 1 1 No Burkholderia cenocepacia MC0-3 1 1 No Burkholderia cenocepacia AU 1054 1 1 No Burkholderia cenocepacia J2315 1 1 No Burkholderia multivorans ATCC 17616 1 1 No Burkholderia cepacia GG4 2 2 No Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 1 1 No Variovorax paradoxus B4 1 1 No Bordetella parapertussis Bpp5 1 1 No Bordetella bronchiseptica MO149 1 1 No Bordetella bronchiseptica 253 1 1 No Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 1 1 No Nitrosomonas sp. AL212 1 1 No Sulfuricella denitrificans skB26 1 1 No Caulobacter crescentus CB15 4 4 No Zymomonas mobilis subsp. mobilis ATCC 29191 2 2 No Zymomonas mobilis subsp. mobilis CP4 2 2 No Zymomonas mobilis subsp. mobilis ATCC 10988 2 2 No Zymomonas mobilis subsp. mobilis ZM4 2 2 No Zymomonas mobilis subsp. pomaceae ATCC 29192 2 2 No Phaeobacter gallaeciensis DSM 17395 2 2 No Phaeobacter gallaeciensis DSM 26640 3 3 No Leisingera methylohalidivorans DSM 14336 4 4 No Octadecabacter antarcticus 307 2 2 No Octadecabacter arcticus 238 2 2 No Rhodobacter sphaeroides KD131 3 3 No Rhodobacter sphaeroides ATCC 17025 1 1 No Rhodobacter sphaeroides 2.4.1 3 3 No Paracoccus aminophilus JCM 7686 1 1 No Magnetospirillum gryphiswaldense MSR-1 v2 1 1 No Rhodospirillum rubrum ATCC 11170 1 1 No Gluconobacter oxydans H24 1 1 No Acetobacter pasteurianus 386B 1 1 No Acetobacter pasteurianus IFO 3283-12 1 1 No Acetobacter pasteurianus IFO 3283-01-42C 1 1 No Acetobacter pasteurianus IFO 3283-32 1 1 No Acetobacter pasteurianus IFO 3283-26 1 1 No Acetobacter pasteurianus IFO 3283-22 1 1 No Acetobacter pasteurianus IFO 3283-07 1 1 No Acetobacter pasteurianus IFO 3283-03 1 1 No Micavibrio aeruginosavorus EPB 2 2 No Methylobacterium extorquens DM4 2 2 No Methylobacterium extorquens PA1 1 1 No Brucella ceti TE10759-12 1 1 No Brucella ceti TE28753-12 1 1 No Brucella canis HSK A52141 1 1 No Brucella suis VBI22 1 1 No Brucella suis 1330 1 1 No Brucella suis 1330 1 1 No Brucella melitensis bv. 1 str. 16M 1 1 No Brucella melitensis biovar Abortus 2308 1 1 No Brucella abortus bv. 1 str. 9-941 1 1 No Sinorhizobium fredii USDA 257 2 2 No Sinorhizobium fredii HH103 2 2 No Sinorhizobium meliloti 2011 2 2 No Sinorhizobium meliloti GR4 2 2 No Sinorhizobium meliloti Rm41 4 4 No Sinorhizobium meliloti SM11 2 2 No Sinorhizobium meliloti BL225C 2 2 No Sinorhizobium meliloti 1021 2 2 No Rhizobium etli CFN 42 3 3 No Rhizobium etli bv. mimosae str. Mim1 3 3 No Rhizobium tropici CIAT 899 1 1 No Rhizobium leguminosarum bv. trifolii WSM2304 4 4 No Rhizobium leguminosarum bv. trifolii WSM1325 4 4 No Mesorhizobium australicum WSM2073 3 3 No Hyphomicrobium nitrativorans NL23 6 6 No Hyphomicrobium denitrificans 1NES1 1 1 No Oligotropha carboxidovorans OM5 2 2 No Oligotropha carboxidovorans OM5 2 2 No Rhodopseudomonas palustris DX-1 2 2 No Rhodopseudomonas palustris TIE-1 2 2 No Rhodopseudomonas palustris HaA2 3 3 No Rhodopseudomonas palustris BisB5 2 2 No Rhodopseudomonas palustris BisB18 1 1 No Rhodopseudomonas palustris CGA009 2 2 No Bradyrhizobium sp. S23321 2 2 No Bradyrhizobium sp. BTAi1 3 3 No Bradyrhizobium oligotrophicum S58 2 2 No Bradyrhizobium japonicum USDA 6 2 2 No Simiduia agarivorans SA1 = DSM 21679 1 1 No Vibrio sp. EJY3 1 1 No Glaciecola psychrophila 170 5 5 No Alteromonas macleodii str. 'Ionian Sea UM4b' 5 4 No Alteromonas macleodii str. 'Ionian Sea UM7' 6 5 No Alteromonas macleodii str. 'Ionian Sea U8' 4 4 No Alteromonas macleodii str. 'Ionian Sea U7' 4 4 No Alteromonas macleodii str. 'Ionian Sea U4' 4 4 No Alteromonas macleodii str. 'Aegean Sea MED64' 4 4 No Alteromonas macleodii str. 'English Channel 615' 4 4 No Alteromonas macleodii AltDE1 6 5 No Alteromonas macleodii str. 'English Channel 673' 6 5 No Alteromonas macleodii str. 'Balearic Sea AD45' 6 5 No Alteromonas macleodii str. 'Black Sea 11' 6 5 No Alteromonas macleodii ATCC 27126 7 6 No Thalassolituus oleivorans MIL-1 1 1 No Stenotrophomonas maltophilia D457 8 8 No Stenotrophomonas maltophilia JV3 6 6 No Stenotrophomonas maltophilia R551-3 6 6 No Xylella fastidiosa subsp. fastidiosa GB514 1 1 No Xylella fastidiosa M12 1 1 No Xylella fastidiosa Temecula1 1 1 No Xylella fastidiosa 9a5c 1 1 No Xanthomonas citri subsp. citri Aw12879 6 6 No Xanthomonas campestris pv. vesicatoria str. 85-10 6 6 No Xanthomonas axonopodis pv. citrumelo F1 6 6 No Xanthomonas axonopodis Xac29-1 6 6 No Xanthomonas oryzae pv. oryzicola BLS256 5 5 No Xanthomonas oryzae pv. oryzae MAFF 311018 5 5 No Xanthomonas oryzae pv. oryzae KACC 10331 5 5 No Xanthomonas campestris pv. raphani 756C 5 5 No Xanthomonas campestris pv. campestris str. 8004 5 5 No Xanthomonas campestris pv. campestris str. ATCC 33913 5 5 No Thioflavicoccus mobilis 8321 2 2 No Dickeya dadantii 3937 1 1 No Azotobacter vinelandii CA6 1 1 No Azotobacter vinelandii CA 1 1 No Pseudomonas denitrificans ATCC 13867 2 2 No Pseudomonas syringae pv. phaseolicola 1448A 2 1 No Pseudomonas syringae pv. syringae B728a 2 1 No Pseudomonas monteilii SB3101 3 3 No Pseudomonas monteilii SB3078 3 3 No Pseudomonas putida HB3267 1 1 No Pseudomonas putida NBRC 14164 1 1 No Pseudomonas putida DOT-T1E 1 1 No Pseudomonas putida S16 1 1 No Pseudomonas putida BIRD-1 1 1 No Pseudomonas putida W619 1 1 No Pseudomonas putida ND6 1 1 No Pseudomonas putida KT2440 1 1 No Pseudomonas putida GB-1 2 2 No Pseudomonas protegens CHA0 1 1 No Pseudomonas fluorescens F113 2 1 No Pseudomonas fluorescens R124 2 1 No Pseudomonas fluorescens Pf0-1 3 2 No Pseudomonas resinovorans NBRC 106553 2 2 No Pseudomonas aeruginosa SCV20265 1 1 No Pseudomonas aeruginosa LES431 1 1 No Pseudomonas aeruginosa RP73 1 1 No Pseudomonas aeruginosa PA1R 1 1 No Pseudomonas aeruginosa PA1 1 1 No Pseudomonas aeruginosa DK2 1 1 No Pseudomonas aeruginosa M18 1 1 No Pseudomonas aeruginosa LESB58 1 1 No Pseudomonas aeruginosa PA7 2 2 No Pseudomonas aeruginosa PAO1 1 1 No Acinetobacter genomosp. 13TU RUH2624 1 1 No Acinetobacter sp. SH024 1 1 No Acinetobacter calcoaceticus ruh2202 1 1 No Francisella noatunensis subsp. orientalis LADL--07-285A 1 1 No Francisella tularensis subsp. holarctica F92 1 1 No Francisella tularensis subsp. holarctica FTNF002-00 1 1 No Francisella tularensis subsp. holarctica OSU18 1 1 No Francisella tularensis subsp. holarctica LVS 1 1 No Francisella tularensis subsp. holarctica FSC200 1 1 No Francisella tularensis subsp. tularensis TIGB03 1 1 No Francisella tularensis subsp. tularensis TI0902 1 1 No Francisella tularensis subsp. tularensis NE061598 1 1 No Francisella tularensis subsp. tularensis FSC198 1 1 No Francisella tularensis subsp. tularensis SCHU S4 1 1 No Francisella cf. novicida Fx1 1 1 No Archaeoglobus sulfaticallidus PM70-1 1 1 No Homo sapiens 75_37 (old version GRC) Human 1207 1054 No Homo sapiens Human 570 466 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 304 261 No Heliconius numata 34 34 No Loa loa v3.3 (Request) Eye worm 103 90 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 99 93 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 78 68 No Moniliophthora perniciosa FA553 18 18 No Encephalitozoon intestinalis 8 8 No Encephalitozoon cuniculi (endoparasite) 8 8 No Picea sitchensis Sitka spruce 35 35 No Lotus japonicus 165 159 No Malus x domestica (Duplicate) Apple 393 373 No Ricinus communis Castor bean 167 157 No Nicotiana benthamiana 0.4.4 (Early draft) 379 360 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 208 199 No Solanum lycopersicum v2.3 (Early assembly) Tomato 212 203 No Phoenix dactylifera Date palm 117 113 No Homo sapiens 69_37 Human 327 281 No Pan troglodytes 69_2.1.4 Chimpanzee 285 247 No Gorilla gorilla 69_3.1 Western gorilla 307 262 No Pongo abelii 69_2 Sumatran orangutan 292 249 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 279 240 No Macaca mulatta 69_1 Rhesus monkey 313 274 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 310 269 No Otolemur garnettii 69_3 Small-eared galago 345 305 No Microcebus murinus 69_1 Gray mouse lemur 239 204 No Rattus norvegicus 69_3.4 Norway rat 310 270 No Mus musculus 69_38 House mouse 311 268 No Dipodomys ordii 69_1 Ord's kangaroo rat 221 194 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 268 239 No Cavia porcellus 69_3 Domestic guinea pig 280 244 No Oryctolagus cuniculus 69_2 Rabbit 272 238 No Ochotona princeps 69 American pika 230 202 No Tupaia belangeri 69 Northern tree shrew 206 181 No Sus scrofa 69_10.2 Pig 302 267 No Bos taurus 69_3.1 Cattle 292 251 No Vicugna pacos 69_1 Alpaca 170 146 No Tursiops truncatus 69_1 Bottlenose dolphin 259 223 No Mustela putorius furo 69_1.0 Domestic ferret 308 254 No Ailuropoda melanoleuca 69_1 Giant panda 301 261 No Canis familiaris 69_3.1 Dog 308 264 No Felis catus 69 Domestic cat 221 196 No Equus caballus 69_2 Horse 293 254 No Myotis lucifugus 69_2.0 Little brown bat 283 249 No Pteropus vampyrus 69_1 Large flying fox 271 234 No Sorex araneus 69_1 European shrew 159 142 No Erinaceus europaeus 69 Western European hedgehog 195 171 No Procavia capensis 69_1 Cape rock hyrax 260 228 No Loxodonta africana 69_3 African savanna elephant 296 258 No Echinops telfairi 69 Small Madagascar hedgehog 198 178 No Dasypus novemcinctus 69_2 Nine-banded armadillo 182 169 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 159 136 No Macropus eugenii 69_1.0 Tammar wallaby 236 209 No Sarcophilus harrisii 69_7.0 Tasmanian devil 269 231 No Monodelphis domestica 69_5 Gray short-tailed opossum 326 258 No Ornithorhynchus anatinus 69_5 Platypus 230 210 No Petromyzon marinus 69_7.0 Sea lamprey 151 124 No Meleagris gallopavo 69_2 Turkey 223 192 No Gallus gallus 69_2 Chicken 216 187 No Taeniopygia guttata 69_3.2.4 Zebra finch 232 203 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 255 223 No Anolis carolinensis 69_2.0 Green anole 255 220 No Xenopus tropicalis 69_4.2 Tropical clawed frog 251 214 No Latimeria chalumnae 69_1 Coelacanth 262 229 No Gadus morhua 69_1 Atlantic cod 318 283 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 311 281 No Takifugu rubripes 69_4 Torafugu 310 274 No Gasterosteus aculeatus 69_1 Three-spined stickleback 328 289 No Oryzias latipes 69_1 Japanese medaka 296 262 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 330 290 No Oreochromis niloticus 69_1.0 Nile tilapia 352 309 No Danio rerio 69_9 Zebrafish 373 321 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 136 123 No Ciona intestinalis 69 Vase tunicate 180 157 No Drosophila melanogaster 69_5 Fruit fly 132 115 No Caenorhabditis elegans 69_215 Roundworm 121 105 No Saccharomyces cerevisiae 69_4 Baker's yeast 22 18 No Arabidopsis thaliana 10 Thale cress 206 192 No 1_050719N (meta-genome) 1 1 No 1_Upper_euphotic (meta-genome) 17 17 No 2_050719S (meta-genome) 1 1 No 3_Below_base_of_euphotic (meta-genome) 9 9 No 4_050719Q (meta-genome) 6 6 No 4_Deep_abyss (meta-genome) 5 5 No 5_050719P (meta-genome) 1 1 No 5_Below_upper_mesopelagic (meta-genome) 1 1 No 6_Upper_euphotic (meta-genome) 11 11 No 7_Oxygen_minimum_layer (meta-genome) 6 6 No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 1 1 No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 1 1 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 21 20 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 18 17 No Atta cephalotes fungus garden (ACEF) (meta-genome) 2 2 No Combined (meta-genome) 17 17 No Cyphomyrmex longiscapus fungus garden (meta-genome) 8 8 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 10 10 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 51 51 No Dump top (Dump top) (meta-genome) 26 26 No Endophytic microbiome from Rice (meta-genome) 18 18 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 9 9 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 15 14 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 17 17 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 2 2 No Fungus garden combined (combined) (meta-genome) 2 2 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 3 3 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 17 17 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 3 3 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 4 4 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 4 4 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 5 5 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 5 5 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 8 8 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 6 5 No Human Gut Community Subject 7 (meta-genome) 1 1 No Human Gut Community Subject 8 (meta-genome) 1 1 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 2 2 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 10 10 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 14 14 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 81 79 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 24 24 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 15 14 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 18 17 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 23 23 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 13 13 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 13 13 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 6 6 No NCBI 2017_08 genome 261704 224365 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 25 25 No Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 1 1 No Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome) 2 2 No Protozoadb 2010_08 (Protozoadb) 2109 1909 No simHC - Simulated High Complexity Metagenome (meta-genome) 17 17 No simLC - Simulated Low Complexity Metagenome (meta-genome) 10 10 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 19 19 No Sludge/Australian, Phrap Assembly (meta-genome) 5 5 No Sludge/US, Jazz Assembly (meta-genome) 7 7 No Sludge/US, Phrap Assembly (meta-genome) 11 11 No Soil microbial communities from Minnesota Farm (meta-genome) 32 31 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 44 44 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 31 31 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 15 15 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 21 21 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 40 40 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 36 36 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 6 6 No STRING v9.0.5 (STRING) 16565 14561 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 4 4 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 49 49 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 6 6 No Termite Protist Endosymbiont Community (meta-genome) 1 1 No Uniprot 2018_03 genome 206497 182476 No Uranium Contaminated Groundwater FW106 (meta-genome) 2 2 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 12 10 No Global Ocean Sampling Expedition (GOS) 2623 2530 No NCBI plasmid sequences (Plasmids) 53 53 No NCBI viral sequences (Viral) 15 15 No PDB chains (SCOP 1.75 ) (PDB) 217 215 No Protein Data Bank (all PDB sequenc) 2302 2268 No SCOP2 SCOPe CATH ECOD (all domain sequ) 5819 5819 No TargetDB 814 734 No UniProt 30 30
