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  Home > Genomes > STRING v9.0.5 > Retrovirus capsid dimerization domain-like domains


Retrovirus capsid dimerization domain-like superfamily domain assignments
in
STRING v9.0.5

Assignment details

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STRING v9.0.5 (STRING) has 793 significant domains in 793 proteins.

     

Sequence ID   Evalue   Region   Family  
10090.ENSMUSP00000004614   3.71e-33   157-242   SCAN domain  
10090.ENSMUSP00000005709   2.38e-34   117-209   SCAN domain  
10090.ENSMUSP00000013262   1.42e-35   35-126   SCAN domain  
10090.ENSMUSP00000018491   4.3e-36   36-124   SCAN domain  
10090.ENSMUSP00000019660   1.79e-38   49-140   SCAN domain  
10090.ENSMUSP00000023176   3.07e-36   36-127   SCAN domain  
10090.ENSMUSP00000026693   6.41e-39   39-131   SCAN domain  
10090.ENSMUSP00000031632   2.38e-35   39-128   SCAN domain  
10090.ENSMUSP00000032820   5.49e-35   36-126   SCAN domain  
10090.ENSMUSP00000039073   1.24e-34   122-209   SCAN domain  
10090.ENSMUSP00000040248   1.33e-34   46-133   SCAN domain  
10090.ENSMUSP00000041821   2.24e-34   39-128   SCAN domain  
10090.ENSMUSP00000042321   5.49e-21   68-132   SCAN domain  
10090.ENSMUSP00000045805   5.95e-36   40-131   SCAN domain  
10090.ENSMUSP00000054604   4.26e-39   44-135   SCAN domain  
10090.ENSMUSP00000055738   2.24e-33   47-136   SCAN domain  
10090.ENSMUSP00000057253   2.29e-38   46-135   SCAN domain  
10090.ENSMUSP00000057651   2.56e-36   43-132   SCAN domain  
10090.ENSMUSP00000058904   4.39e-38   40-130   SCAN domain  
10090.ENSMUSP00000064637   2.11e-39   46-137   SCAN domain  
10090.ENSMUSP00000066504   1.01e-21   38-120   SCAN domain  
10090.ENSMUSP00000069854   3.07e-36   28-117   SCAN domain  
10090.ENSMUSP00000071695   9.16e-38   43-132   SCAN domain  
10090.ENSMUSP00000072449   6.87e-28   29-116   SCAN domain  
10090.ENSMUSP00000081618   2.11e-35   43-131   SCAN domain  
10090.ENSMUSP00000082814   7.78e-36   44-133   SCAN domain  
10090.ENSMUSP00000091664   2.7e-36   35-122   SCAN domain  
10090.ENSMUSP00000092446   1.01e-21   38-120   SCAN domain  
10090.ENSMUSP00000093255   2.2e-28   37-125   SCAN domain  
10090.ENSMUSP00000093266   5.49e-36   38-127   SCAN domain  
10090.ENSMUSP00000095487   2.56e-35   40-127   SCAN domain  
10090.ENSMUSP00000099095   1.65e-36   22-112   SCAN domain  
10090.ENSMUSP00000104207   1.01e-31   20-105   SCAN domain  
10090.ENSMUSP00000105211   7.78e-25   65-129   SCAN domain  
10090.ENSMUSP00000106289   2.56e-39   10-102   SCAN domain  
10090.ENSMUSP00000106586   9.16e-40   114-207   SCAN domain  
10090.ENSMUSP00000112135   7.32e-39   44-135   SCAN domain  
10090.ENSMUSP00000114531   3.71e-35   37-124   SCAN domain  
10090.ENSMUSP00000119114   6.41e-33   177-262   SCAN domain  
10090.ENSMUSP00000120149   1.01e-21   38-120   SCAN domain  
10116.ENSRNOP00000001300   1.19e-35   43-132   SCAN domain  
10116.ENSRNOP00000001302   1.92e-36   39-128   SCAN domain  
10116.ENSRNOP00000001810   8.7e-39   116-207   SCAN domain  
10116.ENSRNOP00000004291   2.11e-35   44-130   SCAN domain  
10116.ENSRNOP00000005518   2.47e-36   36-123   SCAN domain  
10116.ENSRNOP00000008887   1.28e-35   40-127   SCAN domain  
10116.ENSRNOP00000009059   5.95e-39   41-133   SCAN domain  
10116.ENSRNOP00000010059   1.33e-36   39-130   SCAN domain  
10116.ENSRNOP00000010442   2.66e-36   36-127   SCAN domain  
10116.ENSRNOP00000012874   8.97e-19   1168-1245   Retrovirus capsid protein C-terminal domain  
10116.ENSRNOP00000020207   4.21e-35   44-132   SCAN domain  
10116.ENSRNOP00000020281   5.49e-34   39-128   SCAN domain  
10116.ENSRNOP00000020787   1.01e-31   20-105   SCAN domain  
10116.ENSRNOP00000022304   9.61e-39   46-137   SCAN domain  
10116.ENSRNOP00000023421   2.52e-34   48-133   SCAN domain  
10116.ENSRNOP00000024694   1.37e-34   36-126   SCAN domain  
10116.ENSRNOP00000024783   1.65e-38   44-134   SCAN domain  
10116.ENSRNOP00000024797   1.28e-38   44-134   SCAN domain  
10116.ENSRNOP00000024906   5.95e-39   40-130   SCAN domain  
10116.ENSRNOP00000026298   9.16e-32   155-241   SCAN domain  
10116.ENSRNOP00000026305   2.56e-36   42-131   SCAN domain  
10116.ENSRNOP00000029851   1.6e-22   66-129   SCAN domain  
10116.ENSRNOP00000030768   1.88e-36   39-127   SCAN domain  
10116.ENSRNOP00000031357   1.6e-28   37-123   SCAN domain  
10116.ENSRNOP00000033865   1.01e-23   30-122   SCAN domain  
10116.ENSRNOP00000034442   2.88e-36   10-100   SCAN domain  
10116.ENSRNOP00000034947   1.28e-36   43-133   SCAN domain  
10116.ENSRNOP00000035470   2.93e-36   109-202   SCAN domain  
10116.ENSRNOP00000036378   2.56e-33   48-137   SCAN domain  
10116.ENSRNOP00000036503   1.28e-32   44-130   SCAN domain  
10116.ENSRNOP00000037782   1.28e-23   9-90   SCAN domain  
10116.ENSRNOP00000038864   1.65e-36   35-122   SCAN domain  
10116.ENSRNOP00000041322   5.04e-36   22-109   SCAN domain  
10116.ENSRNOP00000047717   2.52e-23   37-122   SCAN domain  
10116.ENSRNOP00000048271   6.87e-18   7-95   SCAN domain  
10116.ENSRNOP00000051042   1.01e-38   49-140   SCAN domain  
10116.ENSRNOP00000051121   7.32e-38   42-132   SCAN domain  
10116.ENSRNOP00000055109   1.42e-35   31-122   SCAN domain  
10116.ENSRNOP00000061203   5.49e-25   65-130   SCAN domain  
10116.ENSRNOP00000062377   5.95e-22   32-122   SCAN domain  
10141.ENSCPOP00000000690   2.52e-38   38-128   SCAN domain  
10141.ENSCPOP00000000881   3.16e-37   35-124   SCAN domain  
10141.ENSCPOP00000001613   3.02e-40   11-103   SCAN domain  
10141.ENSCPOP00000001705   6.87e-34   45-134   SCAN domain  
10141.ENSCPOP00000002060   8.24e-38   42-132   SCAN domain  
10141.ENSCPOP00000002188   1.74e-38   44-132   SCAN domain  
10141.ENSCPOP00000003043   9.61e-34   51-140   SCAN domain  
10141.ENSCPOP00000003647   1.46e-36   22-112   SCAN domain  
10141.ENSCPOP00000003990   5.49e-37   44-133   SCAN domain  
10141.ENSCPOP00000004207   6.87e-38   47-135   SCAN domain  
10141.ENSCPOP00000004695   6.41e-34   42-130   SCAN domain  
10141.ENSCPOP00000004878   4.3e-23   40-128   SCAN domain  
10141.ENSCPOP00000005203   2.2e-38   48-139   SCAN domain  
10141.ENSCPOP00000005916   1.19e-37   46-135   SCAN domain  
10141.ENSCPOP00000007626   5.49e-28   34-119   SCAN domain  
10141.ENSCPOP00000007734   9.61e-36   27-117   SCAN domain  
10141.ENSCPOP00000008184   7.78e-29   23-113   SCAN domain  
10141.ENSCPOP00000008777   4.49e-38   36-127   SCAN domain  
10141.ENSCPOP00000008901   2.84e-34   38-131   SCAN domain  
10141.ENSCPOP00000011096   8.7e-29   48-131   SCAN domain  
10141.ENSCPOP00000011513   2.56e-37   36-124   SCAN domain  
10141.ENSCPOP00000011992   3.75e-33   39-126   SCAN domain  
10141.ENSCPOP00000012343   1.69e-36   42-134   SCAN domain  
10141.ENSCPOP00000012533   2.66e-35   37-126   SCAN domain  
10141.ENSCPOP00000013300   1.79e-36   46-136   SCAN domain  
10141.ENSCPOP00000013303   1.74e-39   46-137   SCAN domain  
10141.ENSCPOP00000013836   6.87e-39   40-130   SCAN domain  
10141.ENSCPOP00000014265   3.07e-29   3-84   SCAN domain  
10141.ENSCPOP00000014648   4.03e-17   340-416   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000014981   1.28e-36   12-98   SCAN domain  
10141.ENSCPOP00000015077   4.03e-21   343-423   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000015186   4.03e-21   343-423   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000015402   7.32e-39   39-131   SCAN domain  
10141.ENSCPOP00000015467   5.31e-18   340-419   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000015685   4.4e-21   343-423   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000017274   7.32e-40   49-140   SCAN domain  
10141.ENSCPOP00000017414   0.000000125   340-373   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000017736   2.43e-35   43-132   SCAN domain  
10141.ENSCPOP00000017853   4.3e-21   71-134   SCAN domain  
10141.ENSCPOP00000018555   3.94e-38   40-131   SCAN domain  
10141.ENSCPOP00000018781   2.56e-20   340-420   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000019010   3.39e-35   51-135   SCAN domain  
10141.ENSCPOP00000019075   4.4e-18   340-419   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000019175   5.13e-18   341-420   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000019731   6.41e-28   42-131   SCAN domain  
10141.ENSCPOP00000020022   2.7e-38   42-133   SCAN domain  
10141.ENSCPOP00000020127   1.19e-38   27-117   SCAN domain  
10141.ENSCPOP00000020268   7.69e-18   340-408   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000020410   1.63e-19   343-423   Retrovirus capsid protein C-terminal domain  
10141.ENSCPOP00000020486   1.19e-22   41-124   SCAN domain  
10141.ENSCPOP00000020564   1.83e-36   35-126   SCAN domain  
10141.ENSCPOP00000020587   5.49e-26   102-167   SCAN domain  
10141.ENSCPOP00000020642   1.51e-34   36-123   SCAN domain  
10141.ENSCPOP00000020867   9.61e-36   43-132   SCAN domain  
13616.ENSMODP00000000180   1.65e-36   32-122   SCAN domain  
13616.ENSMODP00000001831   2.2e-26   98-163   SCAN domain  
13616.ENSMODP00000004018   2.01e-40   45-136   SCAN domain  
13616.ENSMODP00000006306   1.46e-37   45-135   SCAN domain  
13616.ENSMODP00000009205   8.24e-36   47-134   SCAN domain  
13616.ENSMODP00000009240   1.56e-35   1-87   SCAN domain  
13616.ENSMODP00000009759   1.88e-37   43-133   SCAN domain  
13616.ENSMODP00000009851   8.7e-40   47-138   SCAN domain  
13616.ENSMODP00000009928   8.7e-36   52-135   SCAN domain  
13616.ENSMODP00000010936   1.79e-36   36-126   SCAN domain  
13616.ENSMODP00000013655   1.37e-34   45-136   SCAN domain  
13616.ENSMODP00000016175   4.3e-39   39-131   SCAN domain  
13616.ENSMODP00000019287   1.97e-35   40-130   SCAN domain  
13616.ENSMODP00000020519   7.78e-38   30-120   SCAN domain  
13616.ENSMODP00000020981   2.11e-36   43-133   SCAN domain  
13616.ENSMODP00000021121   9.61e-32   1-78   SCAN domain  
13616.ENSMODP00000022214   9.16e-39   2-90   SCAN domain  
13616.ENSMODP00000023209   3.62e-23   35-126   SCAN domain  
13616.ENSMODP00000024155   1.46e-39   41-129   SCAN domain  
13616.ENSMODP00000026434   5.04e-39   36-126   SCAN domain  
13616.ENSMODP00000027689   3.07e-35   46-136   SCAN domain  
13616.ENSMODP00000027834   2.47e-33   33-121   SCAN domain  
13616.ENSMODP00000027842   4.58e-36   38-128   SCAN domain  
13616.ENSMODP00000029316   4.58e-39   41-133   SCAN domain  
13616.ENSMODP00000029332   3.16e-35   39-128   SCAN domain  
13616.ENSMODP00000030623   6.87e-39   29-120   SCAN domain  
13616.ENSMODP00000031126   8.24e-39   50-140   SCAN domain  
13616.ENSMODP00000031904   6.41e-40   43-134   SCAN domain  
13616.ENSMODP00000031926   1.88e-37   46-137   SCAN domain  
13616.ENSMODP00000031949   5.95e-37   45-133   SCAN domain  
13616.ENSMODP00000034591   4.58e-39   37-125   SCAN domain  
13616.ENSMODP00000034643   3.3e-38   46-136   SCAN domain  
13616.ENSMODP00000034689   7.78e-39   39-130   SCAN domain  
13616.ENSMODP00000035467   2.29e-41   38-130   SCAN domain  
13616.ENSMODP00000035473   1.92e-25   22-103   SCAN domain  
28377.ENSACAP00000001928   8.24e-30   61-146   SCAN domain  
28377.ENSACAP00000003424   3.71e-25   1-67   SCAN domain  
28377.ENSACAP00000004132   1.88e-33   2-87   SCAN domain  
28377.ENSACAP00000005179   4.17e-32   1-82   SCAN domain  
28377.ENSACAP00000005468   7.78e-32   1-82   SCAN domain  
28377.ENSACAP00000008597   3.3e-26   1-66   SCAN domain  
28377.ENSACAP00000010122   2.93e-27   43-126   SCAN domain  
28377.ENSACAP00000010173   4.58e-26   1-66   SCAN domain  
28377.ENSACAP00000010175   4.58e-28   43-129   SCAN domain  
28377.ENSACAP00000010340   3.71e-25   1-67   SCAN domain  
28377.ENSACAP00000010526   1.24e-31   20-106   SCAN domain  
28377.ENSACAP00000010684   3.71e-25   1-67   SCAN domain  
28377.ENSACAP00000010843   4.58e-33   1-81   SCAN domain  
28377.ENSACAP00000011430   2.93e-26   8-76   SCAN domain  
28377.ENSACAP00000012300   3.71e-25   1-67   SCAN domain  
28377.ENSACAP00000012706   1.51e-30   46-133   SCAN domain  
28377.ENSACAP00000014188   1.97e-25   35-120   SCAN domain  
28377.ENSACAP00000016215   3.71e-25   1-67   SCAN domain  
31033.ENSTRUP00000001502   0.0000000000000211   61-155   SCAN domain  
31033.ENSTRUP00000032888   2.11e-20   62-153   SCAN domain  
31033.ENSTRUP00000035266   1.6e-17   62-152   SCAN domain  
59729.ENSTGUP00000016408   7.32e-34   36-125   SCAN domain  
69293.ENSGACP00000001827   1.14e-21   91-183   SCAN domain  
69293.ENSGACP00000002414   5.49e-20   91-176   SCAN domain  
69293.ENSGACP00000003571   3.62e-22   89-181   SCAN domain  
69293.ENSGACP00000010085   0.0000000000439   65-153   SCAN domain  
69293.ENSGACP00000016896   0.00000000000458   64-153   SCAN domain  
69293.ENSGACP00000017660   8.7e-22   91-183   SCAN domain  
69293.ENSGACP00000024802   8.24e-22   91-183   SCAN domain  
69293.ENSGACP00000025948   8.24e-22   91-183   SCAN domain  
6945.ISCW001826-PA   0.000000000011   73-164   SCAN domain  
6945.ISCW002319-PA   0.000000000000022   103-196   SCAN domain  
6945.ISCW003168-PA   0.000000732   53-136   SCAN domain  
6945.ISCW003962-PA   0.0000000032   3-45   SCAN domain  
7668.XP_001175618   9.16e-18   149-244   SCAN domain  
7668.XP_001177473   0.00000252   169-264   SCAN domain  
7668.XP_001177845   3.57e-17   162-255   SCAN domain  
7668.XP_001179617   1.01e-17   206-298   SCAN domain  
7668.XP_001180903   0.00000000000128   148-242   SCAN domain  
7668.XP_001181093   0.00000000000128   148-242   SCAN domain  
7668.XP_001181187   0.00000000000133   172-266   SCAN domain  
7668.XP_001181268   0.00000000000233   148-242   SCAN domain  
7668.XP_001187117   0.0000916   20-71   SCAN domain  
7668.XP_001192826   4.35e-17   151-244   SCAN domain  
7668.XP_001193133   2.33e-16   152-242   SCAN domain  
7668.XP_001200841   0.00000169   123-170   SCAN domain  
7668.XP_783336   1.56e-17   285-380   SCAN domain  
7955.ENSDARP00000097748   4.58e-16   410-482   Retrovirus capsid protein C-terminal domain  
8090.ENSORLP00000000738   2.11e-24   82-164   SCAN domain  
8090.ENSORLP00000017538   3.98e-20   147-229   SCAN domain  
8090.ENSORLP00000022809   0.00000000293   1-48   SCAN domain  
8364.ENSXETP00000002286   1.01e-17   122-208   SCAN domain  
8364.ENSXETP00000011003   0.000000000000016   145-230   SCAN domain  
8364.ENSXETP00000011079   4.3e-18   149-235   SCAN domain  
8364.ENSXETP00000013331   0.000000215   75-139   SCAN domain  
8364.ENSXETP00000014905   0.0000000000000011   147-233   SCAN domain  
8364.ENSXETP00000014906   5.95e-18   149-235   SCAN domain  
8364.ENSXETP00000019631   1.65e-30   39-131   SCAN domain  
8364.ENSXETP00000041983   5.95e-18   147-233   SCAN domain  
8364.ENSXETP00000046882   3.57e-29   40-132   SCAN domain  
8364.ENSXETP00000053589   0.00000000000000179   163-228   SCAN domain  
9258.ENSOANP00000000634   7.78e-41   40-131   SCAN domain  
9258.ENSOANP00000000760   1.97e-37   50-139   SCAN domain  
9258.ENSOANP00000003426   2.24e-40   39-130   SCAN domain  
9258.ENSOANP00000003578   1.01e-36   42-129   SCAN domain  
9258.ENSOANP00000003911   1.1e-38   40-128   SCAN domain  
9258.ENSOANP00000005143   6.87e-36   4-93   SCAN domain  
9258.ENSOANP00000006955   2.7e-35   3-88   SCAN domain  
9258.ENSOANP00000006959   1.37e-32   42-131   SCAN domain  
9258.ENSOANP00000008303   5.49e-40   34-125   SCAN domain  
9258.ENSOANP00000008304   2.93e-37   36-127   SCAN domain  
9258.ENSOANP00000008306   3.07e-38   43-132   SCAN domain  
9258.ENSOANP00000008630   1.42e-28   44-130   SCAN domain  
9258.ENSOANP00000010505   8.7e-34   53-141   SCAN domain  
9258.ENSOANP00000011670   7.32e-37   11-101   SCAN domain  
9258.ENSOANP00000014219   3.62e-39   43-134   SCAN domain  
9258.ENSOANP00000016196   1.92e-31   23-114   SCAN domain  
9258.ENSOANP00000018371   2.15e-34   40-128   SCAN domain  
9258.ENSOANP00000018579   2.11e-21   43-116   SCAN domain  
9258.ENSOANP00000018852   4.58e-20   51-117   SCAN domain  
9258.ENSOANP00000020509   7.78e-40   1-89   SCAN domain  
9258.ENSOANP00000022961   9.61e-23   26-113   SCAN domain  
9258.ENSOANP00000023334   2.33e-37   36-124   SCAN domain  
9258.ENSOANP00000023590   2.2e-39   33-125   SCAN domain  
9258.ENSOANP00000023972   1.24e-36   27-118   SCAN domain  
9258.ENSOANP00000024591   5.95e-34   36-124   SCAN domain  
9258.ENSOANP00000024728   3.62e-22   42-130   SCAN domain  
9258.ENSOANP00000028473   3.2e-38   9-100   SCAN domain  
9361.ENSDNOP00000001442   2.98e-39   44-135   SCAN domain  
9361.ENSDNOP00000001444   3.62e-38   33-126   SCAN domain  
9361.ENSDNOP00000003299   3.62e-39   45-137   SCAN domain  
9361.ENSDNOP00000004838   2.61e-36   36-126   SCAN domain  
9361.ENSDNOP00000005487   8.7e-38   35-123   SCAN domain  
9361.ENSDNOP00000005779   4.17e-37   45-137   SCAN domain  
9361.ENSDNOP00000005846   1.42e-25   87-155   SCAN domain  
9361.ENSDNOP00000006072   2.06e-38   43-134   SCAN domain  
9361.ENSDNOP00000006433   0.0000215   130-163   SCAN domain  
9361.ENSDNOP00000006759   5.04e-38   71-163   SCAN domain  
9361.ENSDNOP00000008457   3.66e-35   34-123   SCAN domain  
9361.ENSDNOP00000008894   1.42e-18   40-129   SCAN domain  
9361.ENSDNOP00000009671   4.58e-24   3-75   SCAN domain  
9361.ENSDNOP00000010529   3.8e-36   32-114   SCAN domain  
9361.ENSDNOP00000010731   9.61e-25   37-123   SCAN domain  
9361.ENSDNOP00000011442   1.79e-36   42-132   SCAN domain  
9361.ENSDNOP00000012303   3.75e-37   22-112   SCAN domain  
9361.ENSDNOP00000012348   2.33e-34   42-130   SCAN domain  
9361.ENSDNOP00000012550   1.05e-36   58-146   SCAN domain  
9361.ENSDNOP00000012713   6.41e-36   36-128   SCAN domain  
9361.ENSDNOP00000012756   1.42e-30   29-118   SCAN domain  
9361.ENSDNOP00000013009   5.04e-38   47-139   SCAN domain  
9361.ENSDNOP00000013091   0.000000000000362   42-93   SCAN domain  
9361.ENSDNOP00000014306   1.92e-39   11-102   SCAN domain  
9361.ENSDNOP00000015026   0.00000000146   46-87   SCAN domain  
9361.ENSDNOP00000016865   6.41e-41   39-131   SCAN domain  
9544.ENSMMUP00000003222   2.33e-37   40-129   SCAN domain  
9544.ENSMMUP00000003410   1.1e-38   48-137   SCAN domain  
9544.ENSMMUP00000003413   1.33e-36   45-137   SCAN domain  
9544.ENSMMUP00000003426   2.24e-29   36-123   SCAN domain  
9544.ENSMMUP00000003429   1.88e-28   36-121   SCAN domain  
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9685.ENSFCAP00000009986   1.74e-38   46-139   SCAN domain  
9685.ENSFCAP00000010528   1.19e-21   38-129   SCAN domain  
9685.ENSFCAP00000011131   1.51e-36   36-123   SCAN domain  
9685.ENSFCAP00000011388   1.37e-33   30-118   SCAN domain  
9685.ENSFCAP00000011389   2.11e-37   42-132   SCAN domain  
9685.ENSFCAP00000012772   0.000000000000011   46-88   SCAN domain  
9685.ENSFCAP00000012812   9.16e-37   58-147   SCAN domain  
9685.ENSFCAP00000014162   9.61e-29   41-128   SCAN domain  
9796.ENSECAP00000000076   8.24e-39   46-134   SCAN domain  
9796.ENSECAP00000000454   1.1e-37   42-133   SCAN domain  
9796.ENSECAP00000000963   2.66e-25   93-157   SCAN domain  
9796.ENSECAP00000002342   1.05e-32   22-112   SCAN domain  
9796.ENSECAP00000002558   4.12e-36   26-113   SCAN domain  
9796.ENSECAP00000004370   5.04e-24   39-129   SCAN domain  
9796.ENSECAP00000004518   3.25e-33   22-112   SCAN domain  
9796.ENSECAP00000004805   3.57e-38   43-130   SCAN domain  
9796.ENSECAP00000004857   4.39e-27   1-65   SCAN domain  
9796.ENSECAP00000004912   1.33e-28   37-122   SCAN domain  
9796.ENSECAP00000005511   5.95e-34   42-131   SCAN domain  
9796.ENSECAP00000005668   4.35e-35   153-242   SCAN domain  
9796.ENSECAP00000006764   2.06e-34   37-127   SCAN domain  
9796.ENSECAP00000007121   2.98e-36   1-89   SCAN domain  
9796.ENSECAP00000007362   3.8e-39   38-128   SCAN domain  
9796.ENSECAP00000007846   3.2e-38   35-126   SCAN domain  
9796.ENSECAP00000008068   2.52e-29   38-128   SCAN domain  
9796.ENSECAP00000008287   8.24e-40   16-104   SCAN domain  
9796.ENSECAP00000008580   4.26e-35   44-132   SCAN domain  
9796.ENSECAP00000009342   1.65e-34   42-131   SCAN domain  
9796.ENSECAP00000009377   3.98e-37   45-134   SCAN domain  
9796.ENSECAP00000009413   1.24e-35   37-126   SCAN domain  
9796.ENSECAP00000010068   3.16e-40   10-102   SCAN domain  
9796.ENSECAP00000010167   9.16e-39   39-130   SCAN domain  
9796.ENSECAP00000010265   1.01e-36   42-132   SCAN domain  
9796.ENSECAP00000010597   1.05e-36   46-133   SCAN domain  
9796.ENSECAP00000010825   3.43e-38   49-137   SCAN domain  
9796.ENSECAP00000012718   2.56e-38   45-137   SCAN domain  
9796.ENSECAP00000012810   1.92e-25   37-129   SCAN domain  
9796.ENSECAP00000013439   1.65e-38   46-135   SCAN domain  
9796.ENSECAP00000013515   5.04e-36   37-126   SCAN domain  
9796.ENSECAP00000013747   1.28e-40   38-129   SCAN domain  
9796.ENSECAP00000014036   2.11e-31   36-124   SCAN domain  
9796.ENSECAP00000014069   1.01e-35   71-164   SCAN domain  
9796.ENSECAP00000014215   2.33e-38   22-109   SCAN domain  
9796.ENSECAP00000014501   3.71e-30   40-128   SCAN domain  
9796.ENSECAP00000014543   2.52e-39   42-134   SCAN domain  
9796.ENSECAP00000015030   1.97e-37   2-90   SCAN domain  
9796.ENSECAP00000015336   2.06e-30   47-122   SCAN domain  
9796.ENSECAP00000015629   3.48e-39   46-137   SCAN domain  
9796.ENSECAP00000017047   1.74e-38   35-123   SCAN domain  
9796.ENSECAP00000017507   1.42e-39   46-137   SCAN domain  
9796.ENSECAP00000017552   7.78e-38   48-137   SCAN domain  
9796.ENSECAP00000018128   2.93e-40   46-137   SCAN domain  
9796.ENSECAP00000019883   0.0000000421   2-36   SCAN domain  
9796.ENSECAP00000020300   3.48e-39   48-139   SCAN domain  
9796.ENSECAP00000020555   1.19e-38   41-132   SCAN domain  
9796.ENSECAP00000021098   8.7e-36   29-119   SCAN domain  
9796.ENSECAP00000021756   6.41e-38   36-128   SCAN domain  
9796.ENSECAP00000021870   1.05e-38   39-131   SCAN domain  
9796.ENSECAP00000022140   7.78e-39   39-129   SCAN domain  
9796.ENSECAP00000022738   4.03e-37   35-123   SCAN domain  
9823.ENSSSCP00000001266   1.19e-38   43-130   SCAN domain  
9823.ENSSSCP00000001267   1.56e-37   33-124   SCAN domain  
9823.ENSSSCP00000001270   2.7e-35   44-132   SCAN domain  
9823.ENSSSCP00000001272   9.61e-37   45-137   SCAN domain  
9823.ENSSSCP00000001273   1.14e-37   49-137   SCAN domain  
9823.ENSSSCP00000001275   3.02e-37   44-135   SCAN domain  
9823.ENSSSCP00000001276   3.34e-34   38-127   SCAN domain  
9823.ENSSSCP00000001277   1.79e-40   35-123   SCAN domain  
9823.ENSSSCP00000001278   2.29e-40   47-138   SCAN domain  
9823.ENSSSCP00000001279   1.37e-40   41-133   SCAN domain  
9823.ENSSSCP00000001285   5.49e-40   47-139   SCAN domain  
9823.ENSSSCP00000002603   1.51e-36   35-123   SCAN domain  
9823.ENSSSCP00000003599   1.14e-28   19-105   SCAN domain  
9823.ENSSSCP00000003600   0.0000000549   1-37   SCAN domain  
9823.ENSSSCP00000003926   3.25e-37   46-133   SCAN domain  
9823.ENSSSCP00000004047   5.95e-39   46-135   SCAN domain  
9823.ENSSSCP00000004048   5.49e-37   42-132   SCAN domain  
9823.ENSSSCP00000004308   7.32e-23   39-127   SCAN domain  
9823.ENSSSCP00000004320   1.6e-35   154-244   SCAN domain  
9823.ENSSSCP00000005075   2.88e-40   11-103   SCAN domain  
9823.ENSSSCP00000007787   2.98e-25   102-166   SCAN domain  
9823.ENSSSCP00000008164   3.25e-39   49-140   SCAN domain  
9823.ENSSSCP00000008351   3.89e-35   42-129   SCAN domain  
9823.ENSSSCP00000008497   1.05e-36   42-133   SCAN domain  
9823.ENSSSCP00000008502   1.14e-37   37-127   SCAN domain  
9823.ENSSSCP00000008506   1.19e-37   38-128   SCAN domain  
9823.ENSSSCP00000010531   1.69e-38   36-124   SCAN domain  
9823.ENSSSCP00000012059   3.11e-37   39-130   SCAN domain  
9823.ENSSSCP00000013488   9.61e-38   22-112   SCAN domain  
9823.ENSSSCP00000013489   5.95e-38   42-133   SCAN domain  
9823.ENSSSCP00000014819   6.87e-36   37-126   SCAN domain  
9823.ENSSSCP00000015530   1.97e-34   43-130   SCAN domain  
9823.ENSSSCP00000016068   1.24e-38   39-131   SCAN domain  
9823.ENSSSCP00000019090   1.97e-36   35-123   SCAN domain  
9823.ENSSSCP00000019106   1.05e-35   37-124   SCAN domain  
9913.ENSBTAP00000000920   8.7e-29   37-120   SCAN domain  
9913.ENSBTAP00000001821   5.95e-22   70-134   SCAN domain  
9913.ENSBTAP00000002117   1.46e-36   42-133   SCAN domain  
9913.ENSBTAP00000002428   1.42e-39   46-137   SCAN domain  
9913.ENSBTAP00000003934   0.00000142   1-39   SCAN domain  
9913.ENSBTAP00000003993   2.15e-36   42-130   SCAN domain  
9913.ENSBTAP00000004651   5.95e-38   47-137   SCAN domain  
9913.ENSBTAP00000004746   1.1e-34   43-131   SCAN domain  
9913.ENSBTAP00000007322   2.93e-25   101-165   SCAN domain  
9913.ENSBTAP00000009129   7.78e-38   43-132   SCAN domain  
9913.ENSBTAP00000009298   2.7e-35   44-132   SCAN domain  
9913.ENSBTAP00000009301   3.52e-37   35-126   SCAN domain  
9913.ENSBTAP00000011774   7.78e-40   46-137   SCAN domain  
9913.ENSBTAP00000012571   9.52e-24   400-472   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000012662   2.38e-34   155-241   SCAN domain  
9913.ENSBTAP00000013542   1.42e-38   46-135   SCAN domain  
9913.ENSBTAP00000013547   1.51e-35   27-117   SCAN domain  
9913.ENSBTAP00000014826   3.39e-34   42-131   SCAN domain  
9913.ENSBTAP00000015461   1.74e-25   36-119   SCAN domain  
9913.ENSBTAP00000015488   2.66e-31   38-125   SCAN domain  
9913.ENSBTAP00000019251   2.84e-40   11-102   SCAN domain  
9913.ENSBTAP00000020039   0.00000038   1-39   SCAN domain  
9913.ENSBTAP00000022184   1.92e-38   39-131   SCAN domain  
9913.ENSBTAP00000022287   1.88e-38   38-127   SCAN domain  
9913.ENSBTAP00000023585   6.41e-39   46-139   SCAN domain  
9913.ENSBTAP00000024080   7.32e-37   22-112   SCAN domain  
9913.ENSBTAP00000026057   1.24e-36   45-132   SCAN domain  
9913.ENSBTAP00000026911   8.24e-38   36-127   SCAN domain  
9913.ENSBTAP00000029042   3.3e-40   49-140   SCAN domain  
9913.ENSBTAP00000030975   3.8e-36   40-131   SCAN domain  
9913.ENSBTAP00000031689   5.49e-29   38-126   SCAN domain  
9913.ENSBTAP00000035458   2.38e-36   45-135   SCAN domain  
9913.ENSBTAP00000036128   1.51e-39   37-126   SCAN domain  
9913.ENSBTAP00000037355   4.53e-37   39-128   SCAN domain  
9913.ENSBTAP00000037357   7.32e-30   39-129   SCAN domain  
9913.ENSBTAP00000042599   8.7e-35   38-128   SCAN domain  
9913.ENSBTAP00000046290   1.52e-18   322-381   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000047418   5.04e-36   1-88   SCAN domain  
9913.ENSBTAP00000047734   7.78e-40   47-135   SCAN domain  
9913.ENSBTAP00000047817   1.97e-36   71-154   SCAN domain  
9913.ENSBTAP00000048400   3.85e-25   375-452   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000048449   1.65e-19   398-466   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000048571   1.01e-38   45-137   SCAN domain  
9913.ENSBTAP00000048591   7.32e-28   37-122   SCAN domain  
9913.ENSBTAP00000048593   1.36e-24   373-446   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000048845   0.0000595   2-40   SCAN domain  
9913.ENSBTAP00000049004   0.00000038   1-39   SCAN domain  
9913.ENSBTAP00000049061   2.75e-23   406-478   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000049073   3.39e-36   41-134   SCAN domain  
9913.ENSBTAP00000049195   5.04e-36   128-217   SCAN domain  
9913.ENSBTAP00000049247   1.74e-26   38-110   SCAN domain  
9913.ENSBTAP00000049279   6.59e-25   384-460   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000049394   1.56e-28   37-121   SCAN domain  
9913.ENSBTAP00000049898   1.46e-40   41-132   SCAN domain  
9913.ENSBTAP00000050080   4.58e-26   284-361   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000050134   5.49e-23   384-456   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000050315   1.88e-36   40-131   SCAN domain  
9913.ENSBTAP00000050537   8.7e-23   36-124   SCAN domain  
9913.ENSBTAP00000050560   1.56e-32   45-137   SCAN domain  
9913.ENSBTAP00000050791   1.58e-21   388-459   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000050796   0.000000000275   400-435   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051006   6.04e-23   393-470   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051046   1.7e-23   443-515   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051152   7.32e-18   38-122   SCAN domain  
9913.ENSBTAP00000051224   2.33e-36   36-126   SCAN domain  
9913.ENSBTAP00000051264   1.69e-27   37-121   SCAN domain  
9913.ENSBTAP00000051304   1.04e-22   34-106   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051447   9.61e-27   10-94   SCAN domain  
9913.ENSBTAP00000051584   9.89e-19   1-77   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051626   4.21e-24   381-453   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000051748   6.87e-36   37-126   SCAN domain  
9913.ENSBTAP00000052198   1.83e-23   128-200   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000052434   2.47e-39   51-143   SCAN domain  
9913.ENSBTAP00000052512   0.000016   1-38   SCAN domain  
9913.ENSBTAP00000052698   7.14e-24   385-457   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000053026   1.59e-23   410-482   Retrovirus capsid protein C-terminal domain  
9913.ENSBTAP00000053455   2.84e-37   35-124   SCAN domain  
9986.ENSOCUP00000000693   2.06e-19   47-127   SCAN domain  
9986.ENSOCUP00000001209   2.52e-36   149-237   SCAN domain  
9986.ENSOCUP00000001917   3.25e-38   43-134   SCAN domain  
9986.ENSOCUP00000002114   2.29e-37   43-133   SCAN domain  
9986.ENSOCUP00000002878   6.87e-36   42-128   SCAN domain  
9986.ENSOCUP00000003089   4.26e-33   44-132   SCAN domain  
9986.ENSOCUP00000004480   4.12e-39   42-132   SCAN domain  
9986.ENSOCUP00000004874   1.19e-37   40-129   SCAN domain  
9986.ENSOCUP00000004939   3.66e-36   45-135   SCAN domain  
9986.ENSOCUP00000005922   7.32e-36   45-133   SCAN domain  
9986.ENSOCUP00000006137   8.24e-39   46-135   SCAN domain  
9986.ENSOCUP00000006212   2.15e-37   46-133   SCAN domain  
9986.ENSOCUP00000006859   3.89e-36   35-124   SCAN domain  
9986.ENSOCUP00000008167   1.46e-36   21-109   SCAN domain  
9986.ENSOCUP00000008697   2.24e-36   36-123   SCAN domain  
9986.ENSOCUP00000009694   5.04e-40   10-102   SCAN domain  
9986.ENSOCUP00000010508   8.24e-38   34-125   SCAN domain  
9986.ENSOCUP00000010619   1.01e-29   32-121   SCAN domain  
9986.ENSOCUP00000012261   1.24e-38   39-131   SCAN domain  
9986.ENSOCUP00000012473   4.58e-37   40-131   SCAN domain  
9986.ENSOCUP00000012592   3.52e-36   22-112   SCAN domain  
9986.ENSOCUP00000012667   4.12e-34   42-130   SCAN domain  
9986.ENSOCUP00000013172   1.05e-38   49-140   SCAN domain  
9986.ENSOCUP00000013783   8.7e-39   45-136   SCAN domain  
9986.ENSOCUP00000014122   3.25e-38   34-124   SCAN domain  
9986.ENSOCUP00000014444   3.75e-38   48-138   SCAN domain  
9986.ENSOCUP00000014456   4.49e-41   40-131   SCAN domain  
9986.ENSOCUP00000014487   1.51e-36   37-128   SCAN domain  
9986.ENSOCUP00000015440   5.04e-36   38-123   SCAN domain  
9986.ENSOCUP00000017749   4.07e-25   31-115   SCAN domain  
9986.ENSOCUP00000018530   1.79e-19   47-127   SCAN domain  
9986.ENSOCUP00000018572   9.61e-28   43-133   SCAN domain  
9986.ENSOCUP00000018691   8.7e-31   3-84   SCAN domain  
9986.ENSOCUP00000019758   1.33e-37   37-124   SCAN domain  
9986.ENSOCUP00000019896   9.61e-38   42-132   SCAN domain  
9986.ENSOCUP00000019913   1.24e-33   42-132   SCAN domain  
9986.ENSOCUP00000020316   1.05e-26   39-121   SCAN domain  
9986.ENSOCUP00000023100   5.04e-24   76-140   SCAN domain  
9986.ENSOCUP00000024605   1.51e-38   45-135   SCAN domain  
9986.ENSOCUP00000025251   2.2e-34   35-126   SCAN domain  
 
Weak hits:
10141.ENSCPOP00000014056   0.0687   235-304   SCAN domain  
1140.Synpcc7942_1210   0.0238   9-77   SCAN domain  
135651.CBN11258   0.0397   30-72   Retrovirus capsid protein C-terminal domain  
135651.CBN25361   0.0397   30-72   Retrovirus capsid protein C-terminal domain  
164328.JGI86437   0.0595   109-148   SCAN domain  
187272.Mlg_1171   0.0687   24-74   SCAN domain  
197221.tlr0320   0.0714   28-71   Retrovirus capsid protein C-terminal domain  
222929.C5NZP6   0.0334   142-181   SCAN domain  
243277.VCA0398   0.0824   4-35   SCAN domain  
266264.Rmet_0157   0.0641   173-205   Retrovirus capsid protein C-terminal domain  
272559.BF4283   0.0158   475-498   Retrovirus capsid protein C-terminal domain  
272624.lpg1066   0.00916   128-157   Retrovirus capsid protein C-terminal domain  
28377.ENSACAP00000013855   0.0389   127-187   Retrovirus capsid protein C-terminal domain  
28377.ENSACAP00000014518   0.00112   127-182   Retrovirus capsid protein C-terminal domain  
283942.IL2508   0.0778   9-44   SCAN domain  
28985.Q6CY62   0.00252   86-127   SCAN domain  
292414.TM1040_2146   0.0439   41-90   SCAN domain  
295405.BF4488   0.0158   475-498   Retrovirus capsid protein C-terminal domain  
29883.JGI302609   0.0504   135-189   Retrovirus capsid protein C-terminal domain  
29883.JGI305706   0.0229   35-78   SCAN domain  
29883.JGI315860   0.0778   79-133   Retrovirus capsid protein C-terminal domain  
29883.JGI322713   0.0961   136-189   Retrovirus capsid protein C-terminal domain  
3055.JGI8784   0.0316   252-278   SCAN domain  
31234.CRE09700   0.0133   32-66   SCAN domain  
31234.CRE14025   0.0101   273-350   SCAN domain  
31234.CRE22996   0.0101   273-350   SCAN domain  
31234.CRE26098   0.00961   262-339   SCAN domain  
315456.RF_0052   0.065   58-121   Retrovirus capsid protein C-terminal domain  
315456.RF_0308   0.065   58-121   Retrovirus capsid protein C-terminal domain  
315456.RF_0342   0.065   58-121   Retrovirus capsid protein C-terminal domain  
315456.RF_0390   0.065   58-121   Retrovirus capsid protein C-terminal domain  
315456.RF_0435   0.065   58-121   Retrovirus capsid protein C-terminal domain  
315456.RF_0975   0.065   58-121   Retrovirus capsid protein C-terminal domain  
316067.Geob_0179   0.0885   241-279   Retrovirus capsid protein C-terminal domain  
321314.SC3921   0.0687   12-63   SCAN domain  
3218.JGI229326   0.00714   53-110   Retrovirus capsid protein C-terminal domain  
331111.EcE24377A_E0065   0.0302   12-45   Retrovirus capsid protein C-terminal domain  
345073.VC0395_0851   0.0824   4-35   SCAN domain  
345073.VC0395_0923   0.0824   4-35   SCAN domain  
3702.AT1G31993.1-P   0.00044   296-328   Retrovirus capsid protein C-terminal domain  
3702.AT2G14380.1-P   0.000879   295-327   Retrovirus capsid protein C-terminal domain  
3702.AT5G38192.1-P   0.000549   293-325   Retrovirus capsid protein C-terminal domain  
395962.Cyan8802_0649   0.0022   20-60   Retrovirus capsid protein C-terminal domain  
39946.BGIOSIBCE008283   0.0778   82-115   SCAN domain  
39946.BGIOSIBCE031152   0.0348   71-89   Retrovirus capsid protein C-terminal domain  
39947.13113.m00183   0.0604   204-231   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g15180.1   0.0549   225-250   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g28910.1   0.0494   316-341   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g29190.1   0.0664   166-189   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g29450.1   0.0678   72-97   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g31410.1   0.0733   336-361   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g34720.1   0.0176   493-520   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g37250.1   0.0934   389-413   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g51820.1   0.0824   512-556   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g57800.1   0.0403   486-537   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os01g62320.1   0.0824   489-515   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g05180.1   0.0238   435-488   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g22050.1   0.0788   523-546   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g25090.1   0.0114   200-249   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g29660.1   0.0168   251-299   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g36640.1   0.0604   169-211   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os02g46670.1   0.0398   82-115   SCAN domain  
39947.LOC_Os02g52970.1   0.0623   141-183   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g03230.1   0.0586   385-409   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g35740.1   0.0238   333-375   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g35870.1   0.0458   391-432   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g36570.1   0.0311   747-795   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g43270.1   0.0916   528-581   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os03g52110.1   0.0167   329-382   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g01400.1   0.0168   105-158   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g01790.1   0.013   207-231   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g03250.1   0.0256   317-359   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g09470.1   0.0117   98-139   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g11240.1   0.0733   297-338   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g13510.1   0.0385   560-613   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g13670.1   0.0124   141-195   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g16200.1   0.0293   61-87   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g17400.1   0.00806   59-102   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g18330.1   0.0134   395-442   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g18870.1   0.0641   149-174   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g19090.1   0.0623   530-572   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g19530.1   0.0033   74-100   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g30630.1   0.0339   343-367   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os04g59080.1   0.0476   278-327   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g07540.1   0.0494   520-544   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g08070.1   0.0595   330-354   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g12310.1   0.0641   441-465   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g14670.1   0.0939   357-382   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g15290.1   0.0128   321-345   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g18070.1   0.0298   115-158   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g20160.1   0.0934   260-301   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g22750.1   0.0256   400-442   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os05g26170.1   0.0458   413-466   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g01100.1   0.0114   52-77   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g07720.1   0.0586   168-219   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g15100.1   0.0623   455-477   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g15630.1   0.0678   462-488   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g17710.1   0.00115   92-118   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g18950.1   0.0311   542-583   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g20590.1   0.00714   141-195   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g20660.1   0.0586   576-629   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g21740.1   0.0678   403-445   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g22230.1   0.0604   120-161   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g25050.1   0.0192   461-489   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g26150.1   0.0769   274-315   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g27480.1   0.0293   547-588   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g34140.1   0.0293   255-282   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g35390.1   0.00842   225-249   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g38240.1   0.0256   458-511   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g47510.1   0.0687   412-463   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os06g48070.1   0.0183   373-424   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g10100.1   0.0108   130-156   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g12060.1   0.0238   302-346   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g13190.1   0.0714   304-330   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g18360.1   0.0952   117-168   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g20670.1   0.0403   529-580   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g26820.1   0.0124   220-271   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g27200.1   0.0421   896-937   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g27420.1   0.0161   630-656   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g28310.1   0.0176   141-189   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g43650.1   0.0238   353-394   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os07g44540.1   0.0106   527-551   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g08460.1   0.0311   539-583   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g12130.1   0.0934   219-268   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g12350.1   0.0348   275-326   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g13750.1   0.0531   520-544   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g16000.1   0.0842   593-646   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g17910.1   0.0348   398-438   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g19890.1   0.0494   499-548   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g22180.1   0.0238   119-145   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g22284.1   0.0733   371-396   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g22760.1   0.0275   358-399   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g24990.1   0.0531   520-544   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g25880.1   0.0201   346-373   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g32250.1   0.0126   305-352   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os08g32260.1   0.0421   300-341   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g04840.1   0.0801   254-278   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g06150.1   0.0385   522-547   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g07270.1   0.0201   240-264   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g07890.1   0.0897   354-402   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g09700.1   0.0916   430-481   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g12020.1   0.0238   243-268   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os09g22330.1   0.0168   364-391   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g03160.1   0.071   171-193   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g06050.1   0.033   481-524   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g15250.1   0.0238   382-408   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g15340.1   0.0181   249-290   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g16390.1   0.00751   77-132   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g18660.1   0.0531   566-619   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g21380.1   0.0119   218-242   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g21840.1   0.0842   322-343   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g24750.1   0.00366   52-76   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g26210.1   0.0154   304-355   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os10g26920.1   0.0458   491-515   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g03000.1   0.00476   200-227   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g10820.1   0.0696   494-518   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g11262.1   0.00604   154-177   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g18810.1   0.0531   292-318   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g19630.1   0.0595   332-372   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g22342.1   0.00568   214-265   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g28840.1   0.0733   52-76   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g37170.1   0.0421   385-438   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os11g44070.1   0.0604   451-475   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g01320.1   0.0824   842-897   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g03760.1   0.0106   527-553   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g08510.1   0.0916   476-528   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g10420.1   0.00733   422-476   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g14290.1   0.0494   516-567   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g22320.1   0.0952   327-368   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g25850.1   0.00114   320-373   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g27910.1   0.022   441-464   Retrovirus capsid protein C-terminal domain  
39947.LOC_Os12g29070.1   0.0238   552-591   Retrovirus capsid protein C-terminal domain  
400673.LPC_2208   0.00714   106-135   Retrovirus capsid protein C-terminal domain  
  0.0893   3-23   Retrovirus capsid protein C-terminal domain  
423368.SNSL254_A4312   0.0687   12-63   SCAN domain  
444177.Bsph_4057   0.000678   275-303   Retrovirus capsid protein C-terminal domain  
449447.MAE_06060   0.043   4-48   SCAN domain  
45351.JGI214552   0.0307   118-196   SCAN domain  
454166.SeAg_B4267   0.0687   12-63   SCAN domain  
4558.Sb02g028780.1   0.0179   83-127   SCAN domain  
4558.Sb05g000983.1   0.0806   619-639   Retrovirus capsid protein C-terminal domain  
479433.Caci_7736   0.0107   5-68   Retrovirus capsid protein C-terminal domain  
479434.Sthe_1845   0.0238   80-111   Retrovirus capsid protein C-terminal domain  
481743.GYMC10_4192   0.0275   27-97   Retrovirus capsid protein C-terminal domain  
485918.Cpin_6439   0.00641   18-79   SCAN domain  
502025.Hoch_5019   0.0201   240-281   Retrovirus capsid protein C-terminal domain  
519442.Huta_2162   0.0794   67-131   Retrovirus capsid protein C-terminal domain  
570417.WPa_1113   0.0211   293-356   Retrovirus capsid protein C-terminal domain  
5833.PF13_0283-1   0.0366   129-191   Retrovirus capsid protein C-terminal domain  
5855.PVX_089220   0.00659   678-719   Retrovirus capsid protein C-terminal domain  
5875.TP01_0729   0.0142   100-148   SCAN domain  
59729.ENSTGUP00000010059   0.0778   47-114   Retrovirus capsid protein C-terminal domain  
6238.CBG00061   0.0147   6-47   Retrovirus capsid protein C-terminal domain  
6238.CBG06295   0.0989   386-411   Retrovirus capsid protein C-terminal domain  
6238.CBG19583   0.0732   24-53   Retrovirus capsid protein C-terminal domain  
6239.F49F1.8   0.0224   212-248   SCAN domain  
6239.ZK1025.3.2   0.032   291-336   Retrovirus capsid protein C-terminal domain  
634499.EpC_34330   0.0336   13-44   Retrovirus capsid protein C-terminal domain  
66084.WRi_010770   0.0128   293-356   Retrovirus capsid protein C-terminal domain  
66692.ABC3825   0.0458   378-400   SCAN domain  
67593.JGI132351   0.0151   45-85   SCAN domain  
67593.JGI137125   0.0142   201-264   SCAN domain  
69293.ENSGACP00000001936   0.0687   69-106   SCAN domain  
6945.ISCW004908-PA   0.0961   4-60   SCAN domain  
6945.ISCW012422-PA   0.00179   13-75   SCAN domain  
6945.ISCW014370-PA   0.0389   22-62   SCAN domain  
7159.AAEL005818-PA   0.00763   138-209   SCAN domain  
7159.AAEL013485-PA   0.011   85-156   SCAN domain  
7237.FBpp0285274   0.00275   41-100   Retrovirus capsid protein C-terminal domain  
7668.XP_001186207   0.0885   98-166   Retrovirus capsid protein C-terminal domain  
7668.XP_001188191   0.0934   108-149   Retrovirus capsid protein C-terminal domain  
7668.XP_001195454   0.0641   48-116   Retrovirus capsid protein C-terminal domain  
7668.XP_001196235   0.0755   228-296   Retrovirus capsid protein C-terminal domain  
8090.ENSORLP00000025089   0.0778   19-42   SCAN domain  
9258.ENSOANP00000026766   0.000778   8-43   SCAN domain  
9361.ENSDNOP00000005792   0.000247   2-40   SCAN domain  
9544.ENSMMUP00000040122   0.00311   1-24   SCAN domain  
9544.ENSMMUP00000040391   0.00343   3-40   SCAN domain  
9598.ENSPTRP00000001022   0.0033   3-40   SCAN domain  
9598.ENSPTRP00000011407   0.0824   682-718   SCAN domain  
9600.ENSPPYP00000001720   0.0032   3-40   SCAN domain  
9600.ENSPPYP00000001814   0.0824   45-69   SCAN domain  
9606.ENSP00000334308   0.0961   786-822   SCAN domain  
9606.ENSP00000361790   0.0033   3-40   SCAN domain  
9615.ENSCAFP00000010454   0.000288   2-40   SCAN domain  
9685.ENSFCAP00000005320   0.000284   2-40   SCAN domain  
9685.ENSFCAP00000011385   0.0137   34-59   SCAN domain  
9685.ENSFCAP00000015820   0.00169   13-79   SCAN domain  
9796.ENSECAP00000019464   0.00435   2-40   SCAN domain  
9823.ENSSSCP00000004302   0.00215   2-40   SCAN domain  
9823.ENSSSCP00000004303   0.0549   2-37   SCAN domain  
9913.ENSBTAP00000052389   0.0183   304-327   Retrovirus capsid protein C-terminal domain  
9986.ENSOCUP00000015022   0.0961   255-304   SCAN domain  

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Add assignments from groups of genomes

View all assignments containing a Retrovirus capsid dimerization domain-like domain in each group of genomes.

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Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   123912 123912
No Yes Homo sapiens 76_38 Human 224 224
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 56 56
No Yes Gorilla gorilla 76_3.1 Western gorilla 73 73
No Yes Pongo abelii 76_2 Sumatran orangutan 57 57
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 58 58
No Yes Papio anubis 76 Olive baboon 53 53
No Yes Macaca mulatta 76_1 Rhesus monkey 90 90
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 94 94
No Yes Otolemur garnettii 76_3 Small-eared galago 47 47
No Yes Microcebus murinus 76_1 Gray mouse lemur 40 40
No Yes Rattus norvegicus 76_5.0 Norway rat 42 42
No Yes Mus musculus 76_38 House mouse 104 104
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 46 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 31 31
No Yes Cavia porcellus 76_3 Domestic guinea pig 61 61
No Yes Oryctolagus cuniculus 76_2 Rabbit 46 46
No Yes Ochotona princeps 76 American pika 37 37
No Yes Tupaia belangeri 76 Northern tree shrew 27 27
No Yes Sus scrofa 76_10.2 Pig 49 49
No Yes Bos taurus 76_3.1 Cattle 64 64
No Yes Ovis aries 76_3.1 Sheep 82 81
No Yes Vicugna pacos 76_1 Alpaca 24 24
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 46 46
No Yes Mustela putorius furo 76_1.0 Domestic ferret 51 51
No Yes Ailuropoda melanoleuca 76_1 Giant panda 65 65
No Yes Canis familiaris 76_3.1 Dog 61 61
No Yes Felis catus 76_6.2 Domestic cat 62 62
No Yes Equus caballus 76_2 Horse 58 58
No Yes Myotis lucifugus 76_2.0 Little brown bat 50 49
No Yes Pteropus vampyrus 76_1 Large flying fox 41 41
No Yes Sorex araneus 76_1 European shrew 28 28
No Yes Erinaceus europaeus 76 Western European hedgehog 20 20
No Yes Procavia capensis 76_1 Cape rock hyrax 38 38
No Yes Loxodonta africana 76_3 African savanna elephant 77 77
No Yes Echinops telfairi 76 Small Madagascar hedgehog 35 35
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 91 91
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 31 31
No Yes Macropus eugenii 76_1.0 Tammar wallaby 21 21
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 93 93
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 44 44
No Yes Ornithorhynchus anatinus 76_5 Platypus 31 31
No Yes Saccoglossus kowalevskii v3.0   7 7
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 16 16
No Yes Anolis carolinensis 76_2.0 Green anole 156 156
No Yes Xenopus laevis African clawed frog 7 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 19 16
No Yes Latimeria chalumnae 76_1 Coelacanth 39 39
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Takifugu rubripes 76_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 8 8
No Yes Oryzias latipes 76_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 3 3
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 5 5
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 27 27
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   3 3
No Yes Rhodnius prolixus 22   2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 4
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Acropora digitifera v1.0   4 4
No Yes Amphimedon queenslandica   36 36
No Yes Amborella trichopoda 22   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 18 15
No Yes Homo sapiens 75_37 (old version GRC) Human 220 220
No Yes Homo sapiens (NCBI version) Human 83 83
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 44 44
No Yes Homo sapiens 69_37 Human 56 56
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 53 53
No Yes Gorilla gorilla 69_3.1 Western gorilla 59 59
No Yes Pongo abelii 69_2 Sumatran orangutan 51 51
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 54 54
No Yes Macaca mulatta 69_1 Rhesus monkey 53 53
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 49 49
No Yes Otolemur garnettii 69_3 Small-eared galago 46 46
No Yes Microcebus murinus 69_1 Gray mouse lemur 40 40
No Yes Rattus norvegicus 69_3.4 Norway rat 40 40
No Yes Mus musculus 69_38 House mouse 43 43
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 30 30
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 42 42
No Yes Cavia porcellus 69_3 Domestic guinea pig 54 54
No Yes Oryctolagus cuniculus 69_2 Rabbit 39 39
No Yes Ochotona princeps 69 American pika 37 37
No Yes Tupaia belangeri 69 Northern tree shrew 27 27
No Yes Sus scrofa 69_10.2 Pig 44 44
No Yes Bos taurus 69_3.1 Cattle 55 55
No Yes Vicugna pacos 69_1 Alpaca 24 24
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 46 46
No Yes Mustela putorius furo 69_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 69_1 Giant panda 55 55
No Yes Canis familiaris 69_3.1 Dog 51 51
No Yes Felis catus 69 Domestic cat 39 39
No Yes Equus caballus 69_2 Horse 52 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 47 46
No Yes Pteropus vampyrus 69_1 Large flying fox 41 41
No Yes Sorex araneus 69_1 European shrew 28 28
No Yes Erinaceus europaeus 69 Western European hedgehog 20 20
No Yes Procavia capensis 69_1 Cape rock hyrax 38 38
No Yes Loxodonta africana 69_3 African savanna elephant 62 62
No Yes Echinops telfairi 69 Small Madagascar hedgehog 35 35
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 26 26
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 31 31
No Yes Macropus eugenii 69_1.0 Tammar wallaby 21 21
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 79 79
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 43 43
No Yes Ornithorhynchus anatinus 69_5 Platypus 28 28
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 16 16
No Yes Anolis carolinensis 69_2.0 Green anole 114 114
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 19 16
No Yes Latimeria chalumnae 69_1 Coelacanth 39 39
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 8 8
No Yes Oryzias latipes 69_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 3 3
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes NCBI 2017_08 genome   14552 14420
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes STRING v9.0.5 (STRING)   793 793
No Yes Uniprot 2018_03 genome   66936 66907
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   42 42
No Yes PDB chains (SCOP 1.75) (PDB)   16 16
No Yes Protein Data Bank (all PDB sequenc)   3117 3117
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   5731 5731
No Yes TargetDB (Targets)   15 15
No Yes UniProt viral sequences (Viral)   25200 25200

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.