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Immunoglobulin superfamily domain assignments
in
Caenorhabditis japonica

Assignment details

(show help)


Caenorhabditis japonica has 345 significant domains in 83 proteins.

     

Sequence ID   Evalue   Region   Family  
CJA00010   0.0000000000582   141-220   I set domains  
  0.000000000168   43-129   I set domains  
CJA00229   2.59e-23   1306-1403   I set domains  
  2.17e-19   1414-1508   I set domains  
  6.74e-19   2411-2502   I set domains  
  1.02e-18   2508-2605   I set domains  
  1.59e-18   1201-1293   I set domains  
  0.000000000000195   2228-2322   I set domains  
CJA01042   0.000000000000141   236-296   I set domains  
CJA01263   1.81e-23   507-532,570-577,627-700   I set domains  
  0.0000000000135   408-489   I set domains  
  0.0000000327   211-304   I set domains  
  0.000000067   37-140   V set domains (antibody variable domain-like)  
  0.00000125   508-602   I set domains  
  0.00000183   292-375   I set domains  
  0.00212   139-215   C2 set domains  
CJA02046   1.69e-16   425-516   I set domains  
  3.11e-16   163-261   I set domains  
  0.00000000000000325   71-151   I set domains  
CJA02732   2.8e-16   318-400   I set domains  
  0.00000000000102   511-612   I set domains  
  0.000000000457   404-511   I set domains  
CJA02786   0.000000000145   155-226   I set domains  
CJA02807   0.000000199   889-980   I set domains  
CJA03190   7.09e-19   199-298   I set domains  
  0.0000000000000305   95-192   I set domains  
  0.00000000007   296-390   I set domains  
CJA03194   1.46e-21   119-209   I set domains  
  2.02e-20   223-315   I set domains  
  9.47e-17   17-112   I set domains  
  2.41e-16   345-459   I set domains  
CJA03309   0.000000000000497   19-114   V set domains (antibody variable domain-like)  
  0.000000000241   121-209   V set domains (antibody variable domain-like)  
CJA03850   0.00000000000271   44-129   I set domains  
  0.00000000216   418-483   I set domains  
  0.0961   584-613   I set domains  
CJA04353   0.000000619   246-318   I set domains  
CJA04630   0.00000154   65-114   I set domains  
CJA04987   4.89e-17   400-487   I set domains  
  0.00000000271   195-267   V set domains (antibody variable domain-like)  
  0.00000156   76-152   I set domains  
  0.0124   6-39   V set domains (antibody variable domain-like)  
CJA05144   9.68e-16   46-121   I set domains  
  0.00000000000000166   154-232   I set domains  
  0.000000000000154   252-370   I set domains  
CJA05269   0.000000000000551   156-218   I set domains  
  0.00203   74-111   I set domains  
CJA05437   0.000000000000237   23-132   V set domains (antibody variable domain-like)  
  0.0000000000171   127-181   I set domains  
CJA05603   2.1e-21   1963-2059   I set domains  
  5.56e-21   373-471   I set domains  
  1.35e-19   1828-1923   I set domains  
  1.42e-19   504-599   I set domains  
  5.38e-19   2202-2301   I set domains  
  8.56e-19   1691-1788   I set domains  
  9.3e-19   1560-1658   I set domains  
  9.33e-19   2478-2568   I set domains  
  1.26e-18   1169-1262   I set domains  
  2.35e-18   638-735   I set domains  
  1.07e-17   772-865   I set domains  
  1.2e-17   92-187   I set domains  
  1.23e-17   1032-1129   I set domains  
  2.8e-17   2342-2436   I set domains  
  4.13e-17   1431-1526   I set domains  
  4.02e-16   2113-2196   I set domains  
  0.00000000000000272   900-995   I set domains  
  0.00000000000263   259-337   I set domains  
  0.00000000000368   1297-1393   I set domains  
CJA05821   0.0000000237   47-82,128-163   I set domains  
CJA06036   0.00000000000000286   158-245   I set domains  
  0.000000000000119   48-147   I set domains  
CJA06073   3.67e-17   485-570   I set domains  
  0.00000000000017   329-425   I set domains  
  0.00000000000251   577-672   I set domains  
  0.000000151   29-96,146-198   I set domains  
  0.0547   243-328   I set domains  
CJA06532   2.2e-23   1611-1706   I set domains  
  1.71e-21   18-115   I set domains  
  8.06e-20   813-904   I set domains  
  3.61e-19   1075-1168   I set domains  
  1.32e-17   942-1037   I set domains  
  1.6e-17   708-805   I set domains  
  1.93e-17   1335-1430   I set domains  
  1.58e-16   300-394   I set domains  
  3.08e-16   1200-1291   I set domains  
  5.98e-16   1480-1574   I set domains  
  0.00000000000000293   136-224   I set domains  
CJA06716   0.00000000000000934   440-533   I set domains  
  0.000000000000014   21-132   V set domains (antibody variable domain-like)  
  0.000000000000724   356-422   I set domains  
  0.000000000333   263-352   I set domains  
  0.00000776   126-187,226-269   C2 set domains  
CJA06909   0.000000000283   245-317   I set domains  
  0.00000000321   25-123   V set domains (antibody variable domain-like)  
CJA07265   1.8e-17   3-91   I set domains  
CJA07421   0.0000000000121   283-374   I set domains  
CJA07521   6.87e-25   3602-3696   I set domains  
  1.37e-23   173-268   I set domains  
  2.37e-23   6026-6118   I set domains  
  3.79e-23   5918-6009   I set domains  
  4.18e-23   5814-5908   I set domains  
  1.54e-22   3132-3227   I set domains  
  2.56e-22   3232-3323   I set domains  
  7.15e-22   2934-3030   I set domains  
  1.24e-21   6246-6340   I set domains  
  1.28e-21   5504-5594   I set domains  
  2.01e-21   6130-6216   I set domains  
  2.93e-21   3499-3590   I set domains  
  1.95e-20   3033-3125   I set domains  
  2.94e-20   2538-2634   I set domains  
  7.41e-20   3700-3792   I set domains  
  1.56e-19   3338-3430   I set domains  
  2.67e-19   275-371   I set domains  
  4.67e-19   571-667   I set domains  
  6.25e-19   5705-5798   I set domains  
  1.16e-18   87-167   I set domains  
  1.35e-18   2311-2405   I set domains  
  1.39e-18   6355-6446   I set domains  
  1.84e-18   2644-2734   I set domains  
  4.68e-18   2018-2109   I set domains  
  7.85e-18   2839-2931   I set domains  
  8.75e-17   1726-1816   I set domains  
  1.01e-16   5599-5688   I set domains  
  1.83e-16   3894-3984   I set domains  
  3.13e-16   4395-4488   I set domains  
  5.36e-16   2403-2494   I set domains  
  8.96e-16   4207-4297   I set domains  
  0.00000000000000144   1920-2012   I set domains  
  0.00000000000000313   473-565   I set domains  
  0.00000000000000313   5304-5397   I set domains  
  0.00000000000000349   3992-4080   I set domains  
  0.0000000000000063   5141-5205   I set domains  
  0.0000000000000205   2114-2206   I set domains  
  0.000000000000113   2214-2306   I set domains  
  0.000000000000215   2736-2833   I set domains  
  0.000000000000301   5401-5493   I set domains  
  0.000000000000413   5213-5308   I set domains  
  0.00000000000123   3797-3885   I set domains  
  0.00000000000491   1822-1916   I set domains  
  0.00000000000824   4300-4390   I set domains  
  0.00000000000849   4090-4196   I set domains  
  0.0000000000126   1633-1724   I set domains  
  0.000000000805   368-463   I set domains  
  0.0000000202   666-786   I set domains  
  0.000000183   1536-1633   I set domains  
CJA07579   1.33e-18   133-221   I set domains  
  0.000158   59-111   I set domains  
CJA07751   0.00000000305   35-119   I set domains  
CJA07763   5.25e-16   229-328   C2 set domains  
  0.0000000000000105   126-218   C1 set domains (antibody constant domain-like)  
  0.0000000000001   761-855   I set domains  
  0.00000000000251   823-944   I set domains  
  0.00000000000795   445-539   I set domains  
  0.000000000207   559-667   C1 set domains (antibody constant domain-like)  
  0.000000000239   26-127   V set domains (antibody variable domain-like)  
  0.00000000695   331-450   V set domains (antibody variable domain-like)  
  0.0000000154   663-755   I set domains  
CJA07944   1.71e-22   1076-1174   I set domains  
CJA08146   2.53e-21   1688-1778   I set domains  
  6.34e-16   831-927   I set domains  
  0.0000000000000629   1144-1239   I set domains  
  0.00000000000347   955-1048   I set domains  
  0.00000000000798   89-177   I set domains  
  0.0000000000125   422-512   I set domains  
  0.000000000131   3039-3124   I set domains  
  0.000000000201   201-294   I set domains  
  0.00000000117   3146-3218   I set domains  
  0.000000102   604-695   I set domains  
  0.00000242   2943-3018   C1 set domains (antibody constant domain-like)  
  0.0000108   725-815   I set domains  
CJA08420   1.67e-18   212-308   I set domains  
  0.0000000000000107   456-572   I set domains  
  0.00000000000137   118-216   I set domains  
  0.0000000000461   434-486   I set domains  
  0.00000000517   35-123   I set domains  
CJA08556   0.00000409   77-117   I set domains  
CJA08905   0.00000105   521-564   I set domains  
CJA09528   1.01e-20   104-199   I set domains  
  5.08e-20   286-384   I set domains  
  2.64e-19   831-921   I set domains  
  5e-19   211-293   I set domains  
  8.58e-19   576-679   I set domains  
  9.3e-18   24-107   I set domains  
  5.85e-17   1021-1105   I set domains  
  0.000000000000023   500-580   I set domains  
  0.00000000000128   378-467   I set domains  
  0.00000199   726-770   I set domains  
  0.00000774   924-1002   C1 set domains (antibody constant domain-like)  
CJA09785   9.21e-22   30-122   I set domains  
CJA10066   0.00000000000000156   646-728   I set domains  
  0.000000116   42-129   V set domains (antibody variable domain-like)  
  0.0000431   242-318   V set domains (antibody variable domain-like)  
  0.000652   473-523,595-635   V set domains (antibody variable domain-like)  
CJA10145   3.14e-16   183-249   I set domains  
  0.000969   83-142   I set domains  
CJA10483   0.000000000000012   225-312   V set domains (antibody variable domain-like)  
  0.000000000000452   111-209   I set domains  
  0.000000000114   19-115   I set domains  
CJA10563   0.0000000000135   27-116   I set domains  
CJA10706   1.68e-20   795-892   I set domains  
  2.02e-20   2415-2512   I set domains  
  2.32e-20   2222-2325   I set domains  
  4.09e-20   1920-2014   I set domains  
  4.36e-20   1362-1461   I set domains  
  4.7e-20   2600-2701   I set domains  
  1.4e-19   1275-1373   I set domains  
  8.71e-19   617-713   I set domains  
  5.39e-18   1019-1103   I set domains  
  5.85e-18   720-809   I set domains  
  7.27e-18   895-991   I set domains  
  8.41e-18   1109-1191   I set domains  
  9.62e-18   1475-1556   I set domains  
  1.83e-17   2099-2193   I set domains  
  4.54e-17   2331-2418   I set domains  
  5.92e-17   1659-1748   I set domains  
  6.03e-17   2697-2792   I set domains  
  7.41e-17   520-610   I set domains  
  1.99e-16   1843-1925   I set domains  
  0.0000000000000019   1185-1281   I set domains  
  0.00000000000000422   1566-1654   I set domains  
  0.0000000000000118   2022-2109   I set domains  
  0.00000000000183   430-522   I set domains  
  0.0000000000019   2517-2607   I set domains  
  0.00000000266   1741-1826   I set domains  
  0.000384   2783-2825   I set domains  
CJA10955   2.12e-23   440-533   I set domains  
CJA11327   1.14e-16   37-124   I set domains  
CJA11618   0.0000000000000336   10-42,139-212   I set domains  
  0.00000229   2-121   I set domains  
CJA11712   3.88e-22   430-525   I set domains  
  1.53e-17   346-442   I set domains  
CJA11813   0.00000134   257-343   I set domains  
  0.0000926   162-220   I set domains  
CJA12273   0.00000521   36-98   I set domains  
CJA12483   0.000000158   245-352   I set domains  
  0.0000127   886-972   I set domains  
  0.0048   456-541   I set domains  
  0.0317   1095-1175   I set domains  
CJA12556   7.74e-21   581-679   I set domains  
  0.00000000000000126   478-591   I set domains  
  0.00000000000127   679-766   I set domains  
CJA13744   0.00000000000000156   232-323   I set domains  
  0.0000000000000667   102-182   I set domains  
  0.000000000038   33-82   I set domains  
  0.000000799   185-227   I set domains  
CJA14364   0.00000000000457   308-395   I set domains  
  0.00000000104   1831-1914   I set domains  
  0.00000000244   1206-1292   I set domains  
  0.0000000155   509-608   I set domains  
  0.0000000815   685-781   I set domains  
  0.000441   895-984   I set domains  
  0.00231   1503-1585   I set domains  
CJA15004   5.62e-23   92-185   I set domains  
  6.45e-16   3-78   I set domains  
  0.0000000000000625   351-445   I set domains  
CJA15014   1.99e-20   211-304   I set domains  
  3.91e-20   121-219   I set domains  
  7.31e-20   413-509   I set domains  
  5.46e-19   608-692   I set domains  
  8.73e-19   688-781   I set domains  
  9.27e-19   331-418   I set domains  
  1.98e-18   504-600   I set domains  
  0.000000142   56-126   I set domains  
  0.000000296   814-857   C2 set domains  
  0.00000732   4-80   I set domains  
CJA15400   0.0000000121   126-211   I set domains  
CJA15992   7.45e-19   39-134   I set domains  
CJA16667   0.00000000000633   41-136   I set domains  
CJA17058   0.0000000000000042   163-266   I set domains  
  0.0000000000203   78-177   I set domains  
  0.0000000000221   270-364   I set domains  
  0.000242   338-413   I set domains  
CJA17212   2.65e-22   315-402   I set domains  
  1.95e-21   407-499   I set domains  
CJA17228   5.84e-17   56-147   I set domains  
  1.03e-16   229-311   I set domains  
  1.03e-16   141-224   I set domains  
  0.0000805   11-46   I set domains  
CJA17555   1.7e-17   458-570   I set domains  
  6.73e-16   350-453   I set domains  
  0.00000000000000703   28-123   I set domains  
CJA17741   0.00000000000000612   1267-1329,1374-1437   I set domains  
  0.000000000000008   91-179   I set domains  
  0.000000000000935   337-425   I set domains  
  0.00000000000311   809-895   I set domains  
  0.00000000000731   619-693   I set domains  
  0.0000000000427   240-330   V set domains (antibody variable domain-like)  
  0.000000000125   3-83   I set domains  
  0.000000000516   418-517   I set domains  
  0.000000000536   875-997   I set domains  
  0.000000000792   514-592   I set domains  
  0.00000000125   1107-1190   I set domains  
  0.00000000202   717-805   I set domains  
  0.000829   1003-1082   I set domains  
  0.0583   1181-1259   V set domains (antibody variable domain-like)  
CJA17877   0.00000397   12-70   I set domains  
CJA17996   0.0000000000000281   62-157   I set domains  
CJA18066   0.00000000000269   329-401   I set domains  
CJA18130   9.72e-17   3067-3160   I set domains  
  0.000000000000822   2133-2218   I set domains  
  0.00000000000196   2757-2852   I set domains  
  0.00000000697   399-469,510-574   I set domains  
  0.000000157   2690-2750   I set domains  
  0.00000164   2238-2327   I set domains  
CJA18322   4.25e-16   64-153   I set domains  
CJA18565   0.000000385   126-204   V set domains (antibody variable domain-like)  
CJA19125   9.7e-24   4870-4969   I set domains  
  1.7e-22   4480-4576   I set domains  
  1.42e-21   5659-5754   I set domains  
  2.4e-21   2223-2316   I set domains  
  1.72e-20   1939-2033   I set domains  
  3.34e-20   5536-5627   I set domains  
  1.06e-19   735-830   I set domains  
  2e-19   4971-5064   I set domains  
  2.38e-19   1038-1132   I set domains  
  9.33e-19   2520-2611   I set domains  
  1.65e-18   5814-5906   I set domains  
  1.32e-17   2813-2904   I set domains  
  1.22e-16   1329-1445   I set domains  
  2.13e-16   1645-1738   I set domains  
  0.00000000000000159   4088-4180   I set domains  
  0.00000000000000281   3789-3886   I set domains  
  0.000000000000048   3401-3488   I set domains  
  0.0000000000001   76-154   I set domains  
  0.00000000000039   3097-3196   I set domains  
  0.000000000000995   249-333   I set domains  
  0.00000000298   431-536   I set domains  
  0.00000000543   150-236   I set domains  
  0.0000000148   340-424   I set domains  
  0.0000000431   4573-4673   I set domains  
CJA19194   8.23e-17   177-279   I set domains  
  8.71e-16   98-180   I set domains  
  0.0000000000000248   284-371   I set domains  
  0.000773   5-56   I set domains  
  0.0122   340-421   I set domains  
CJA19590   0.000000000000124   677-755   I set domains  
  0.000000000783   565-659   I set domains  
CJA20015   9.2e-25   310-403   I set domains  
  4.86e-22   432-526   I set domains  
  8.86e-22   209-296   I set domains  
  3.9e-21   102-195   I set domains  
  4.39e-19   536-632   I set domains  
  0.00000000000000375   1-94   I set domains  
CJA20274   0.0000000000000208   85-149   I set domains  
  0.0144   168-211   C2 set domains  
CJA20516   9.77e-23   204-255,317-376   I set domains  
  3.49e-22   113-211   I set domains  
  1.69e-20   370-466   I set domains  
  4.31e-16   8-102   I set domains  
CJA21379   2.1e-17   481-572   I set domains  
  0.0000000000015   369-461   I set domains  
  0.00000000000189   616-710   I set domains  
  0.000000000642   817-907   I set domains  
  0.000000534   917-1002   I set domains  
  0.00015   723-805   I set domains  
  0.0301   15-50   V set domains (antibody variable domain-like)  
CJA23408   0.00000634   2-51   I set domains  
CJA25314   0.0000000000000941   14-101   I set domains  
CJA25824   0.000000000014   11-86   I set domains  
CJA26166   1.51e-16   324-421   I set domains  
  0.0000000000000103   241-334   I set domains  
  0.0000000000328   133-225   I set domains  
  0.0000000000571   46-120   I set domains  
CJA27314   1.36e-19   34-126   I set domains  
CJA28762   0.0000243   252-303   I set domains  
CJA29223   5.25e-17   3-90   I set domains  
 
Weak hits:
CJA01086   0.0421   405-517   I set domains  
CJA01661   0.00188   2-40   V set domains (antibody variable domain-like)  
CJA03334   0.044   165-218   V set domains (antibody variable domain-like)  
CJA13463   0.000198   113-148   I set domains  
CJA13880   0.0132   65-100   V set domains (antibody variable domain-like)  
CJA16057   0.0163   176-258   I set domains  
CJA17431   0.000978   75-108,143-217   V set domains (antibody variable domain-like)  
CJA17684   0.00019   40-119   I set domains  
CJA19101   0.000225   11-93   V set domains (antibody variable domain-like)  
CJA24513   0.0112   102-144   C1 set domains (antibody constant domain-like)  
CJA26984   0.00648   17-94   I set domains  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2123733 2123733
No Yes Homo sapiens 76_38 Human 9232 3924
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1492 525
No Yes Gorilla gorilla 76_3.1 Western gorilla 1998 762
No Yes Pongo abelii 76_2 Sumatran orangutan 1642 661
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1390 507
No Yes Papio anubis 76 Olive baboon 1890 778
No Yes Macaca mulatta 76_1 Rhesus monkey 2796 1124
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 3138 1212
No Yes Otolemur garnettii 76_3 Small-eared galago 1376 593
No Yes Microcebus murinus 76_1 Gray mouse lemur 1041 391
No Yes Rattus norvegicus 76_5.0 Norway rat 1966 980
No Yes Mus musculus 76_38 House mouse 4012 1454
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1059 356
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1392 640
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1531 597
No Yes Cavia porcellus 76_3 Domestic guinea pig 1559 605
No Yes Oryctolagus cuniculus 76_2 Rabbit 1650 736
No Yes Ochotona princeps 76 American pika 1041 343
No Yes Tupaia belangeri 76 Northern tree shrew 1007 471
No Yes Sus scrofa 76_10.2 Pig 1699 799
No Yes Bos taurus 76_3.1 Cattle 1788 729
No Yes Ovis aries 76_3.1 Sheep 1846 764
No Yes Vicugna pacos 76_1 Alpaca 640 222
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1191 367
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1563 600
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1876 655
No Yes Canis familiaris 76_3.1 Dog 2158 770
No Yes Felis catus 76_6.2 Domestic cat 1543 615
No Yes Equus caballus 76_2 Horse 2007 791
No Yes Myotis lucifugus 76_2.0 Little brown bat 2239 1106
No Yes Pteropus vampyrus 76_1 Large flying fox 1200 401
No Yes Sorex araneus 76_1 European shrew 942 539
No Yes Erinaceus europaeus 76 Western European hedgehog 969 405
No Yes Procavia capensis 76_1 Cape rock hyrax 1092 373
No Yes Loxodonta africana 76_3 African savanna elephant 2066 883
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1087 548
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2308 1214
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 599 216
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1039 352
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1834 690
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2040 747
No Yes Ornithorhynchus anatinus 76_5 Platypus 1277 647
No Yes Saccoglossus kowalevskii v3.0   3527 483
No Yes Petromyzon marinus 76_7.0 Sea lamprey 552 133
No Yes Meleagris gallopavo 76_2 Turkey 1176 427
No Yes Gallus gallus 76_4 Chicken 1449 576
No Yes Anas platyrhynchos 76_1.0 Mallard 1092 350
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 851 332
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1041 343
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1607 627
No Yes Anolis carolinensis 76_2.0 Green anole 1182 451
No Yes Xenopus laevis African clawed frog 1483 699
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1906 696
No Yes Latimeria chalumnae 76_1 Coelacanth 1644 641
No Yes Lepisosteus oculatus 76 Spotted gar 2202 881
No Yes Gadus morhua 76_1 Atlantic cod 1454 522
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1827 649
No Yes Takifugu rubripes 76_4 Torafugu 5014 1617
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1953 750
No Yes Oryzias latipes 76_1 Japanese medaka 1615 623
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1692 566
No Yes Poecilia formosa 76 Amazon molly 2332 797
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 3237 1279
No Yes Astyanax mexicanus 76 Mexican tetra 1924 735
No Yes Danio rerio 76_9 Zebrafish 4352 1482
No Yes Oikopleura dioica   299 73
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 781 156
No Yes Ciona intestinalis 76 Vase tunicate 354 98
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1408 458
No Yes Adineta vaga   702 180
No Yes Octopus bimaculoides 280   778 217
No Yes Crassostrea gigas 22 Pacific oyster 750 268
No Yes Lottia gigantea Owl limpet 539 236
No Yes Helobdella robusta   600 261
No Yes Capitella sp. I   502 223
No Yes Danaus plexippus OGS1.0 Monarch butterfly 636 189
No Yes Heliconius melpomene Postman butterfly 484 177
No Yes Bombyx mori Domestic silkworm 472 219
No Yes Nasonia vitripennis Jewel wasp 321 98
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1147 323
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 451 131
No Yes Linepithema humile v1.1 Argentine ant 466 212
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 477 238
No Yes Solenopsis invicta v.2.2.3 Red fire ant 408 199
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 468 143
No Yes Atta cephalotes v1.1   479 225
No Yes Camponotus floridanus v3.3 Florida carpenter ant 488 138
No Yes Lucilia cuprina Australian sheep blowfly 486 136
No Yes Drosophila grimshawi 1.3   551 145
No Yes Drosophila willistoni 1.3   528 143
No Yes Drosophila pseudoobscura 2.13   565 147
No Yes Drosophila persimilis 1.3   458 151
No Yes Drosophila suzukii   573 127
No Yes Drosophila yakuba 1.3   523 141
No Yes Drosophila simulans 1.3   396 143
No Yes Drosophila sechellia 1.3   510 146
No Yes Drosophila melanogaster 76_5 Fruit fly 3044 444
No Yes Drosophila erecta 1.3   533 140
No Yes Drosophila ananassae 1.3   525 138
No Yes Drosophila virilis 1.2   531 142
No Yes Drosophila mojavensis 1.3   520 140
No Yes Megaselia scalaris 22   232 125
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 554 165
No Yes Culex pipiens quinquefasciatus Southern house mosquito 518 202
No Yes Anopheles darlingi 22 American malaria mosquito 410 129
No Yes Anopheles gambiae 49_3j African malaria mosquito 659 167
No Yes Tribolium castaneum 3.0 Red flour beetle 491 143
No Yes Pediculus humanus corporis (Early assembly) Human body louse 497 128
No Yes Acyrthosiphon pisum Pea aphid 347 101
No Yes Rhodnius prolixus 22   419 164
No Yes Daphnia pulex Common water flea 522 181
No Yes Strigamia maritima 22   1045 252
No Yes Sarcoptes scabiei   357 136
No Yes Tetranychus urticae Two-spotted spider mite 626 187
No Yes Ixodes scapularis (Preliminary) Black-legged tick 645 249
No Yes Pristionchus pacificus   346 96
No Yes Meloidogyne incognita Southern root-knot nematode 394 80
No Yes Meloidogyne hapla   112 43
No Yes Onchocerca volvulus 22   357 73
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 859 117
No Yes Caenorhabditis japonica   345 83
No Yes Caenorhabditis brenneri   457 104
No Yes Caenorhabditis remanei   399 88
No Yes Caenorhabditis elegans 76_235 Roundworm 1705 181
No Yes Caenorhabditis briggsae 2   382 76
No Yes Trichinella spiralis 22   320 74
No Yes Hymenolepis microstoma   257 72
No Yes Echinococcus multilocularis   271 76
No Yes Echinococcus granulosus   268 75
No Yes Taenia solium Pork tapeworm 255 96
No Yes Schistosoma mansoni   277 99
No Yes Mnemiopsis leidyi Sea walnut 563 186
No Yes Thelohanellus kitauei   11 8
No Yes Acropora digitifera v1.0   1090 426
No Yes Nematostella vectensis 1.0 Starlet sea anemone 451 195
No Yes Hydra vulgaris   267 91
No Yes Amphimedon queenslandica   941 314
No Yes Trichoplax adhaerens   165 73
No Yes Proterospongia sp. ATCC 50818   7 6
No Yes Monosiga brevicollis   1 1
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ectocarpus siliculosus   2 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Conexibacter woesei DSM 14684   3 3
No Yes Olsenella uli DSM 7084   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   3 3
No Yes Salinispora arenicola CNS-205   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Cellulomonas flavigena DSM 20109   7 3
No Yes Cellulomonas fimi ATCC 484   3 2
No Yes [Cellvibrio] gilvus ATCC 13127   9 3
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   2 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Ruminococcus albus 7   5 1
No Yes Sulfobacillus acidophilus DSM 10332   2 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Desulfitobacterium hafniense Y51   2 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum ruminis DSM 2154   2 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Heliobacterium modesticaldum Ice1   9 3
No Yes Clostridium cellulovorans 743B   2 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   2 2
No Yes Saprospira grandis str. Lewin   1 1
No Yes Niastella koreensis GR20-10   4 4
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Flexibacter litoralis DSM 6794   7 5
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Fibrella aestuarina   5 5
No Yes Dyadobacter fermentans DSM 18053   2 2
No Yes Cytophaga hutchinsonii ATCC 33406   31 13
No Yes Spirosoma linguale DSM 74   7 6
No Yes Runella slithyformis DSM 19594   1 1
No Yes Porphyromonas asaccharolytica DSM 20707   2 2
No Yes Pedobacter saltans DSM 12145   3 3
No Yes Solitalea canadensis DSM 3403   16 5
No Yes Sphingobacterium sp. 21   2 2
No Yes Fluviicola taffensis DSM 16823   3 3
No Yes Owenweeksia hongkongensis DSM 17368   2 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Maribacter sp. HTCC2170   2 2
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Zobellia galactanivorans   2 2
No Yes Muricauda ruestringensis DSM 13258   2 1
No Yes Cellulophaga algicola DSM 14237   2 2
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Polaribacter sp. MED152   5 2
No Yes Capnocytophaga canimorsus Cc5   2 1
No Yes Flavobacterium indicum GPTSA100-9   3 3
No Yes Flavobacterium johnsoniae UW101   3 3
No Yes Opitutus terrae PB90-1   62 37
No Yes Treponema primitia ZAS-2   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   5 1
No Yes Granulicella mallensis MP5ACTX8   7 2
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   9 2
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Babela massiliensis   39 4
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   5 2
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia gladioli BSR3   4 1
No Yes Shewanella baltica OS185   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Hahella chejuensis KCTC 2396   4 4
No Yes Legionella longbeachae NSW150   2 1
No Yes gamma proteobacterium HdN1   6 3
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   22 1
No Yes Methanoplanus petrolearius DSM 11571   2 2
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 2058 791
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1952 345
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 757 184
No Yes Ascaris suum Victoria/Ghent Pig roundworm 365 74
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1202 143
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Corynebacterium argentoratense DSM 44202   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Sulfobacillus acidophilus TPY   2 1
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   6 3
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   3 3
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli ED1a   3 3
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   3 3
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   2 2
No Yes Escherichia coli O26:H11 str. 11368   4 4
No Yes Escherichia coli O111:H- str. 11128   5 5
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   4 4
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   5 5
No Yes Homo sapiens 75_37 (old version GRC) Human 8350 3634
No Yes Homo sapiens (NCBI version) Human 3275 1048
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1943 883
No Yes Heliconius numata (Incomplete)   27 17
No Yes Loa loa v3.3 (Request) Eye worm 373 77
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 321 156
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 270 61
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Homo sapiens 69_37 Human 2360 1077
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1405 486
No Yes Gorilla gorilla 69_3.1 Western gorilla 1473 547
No Yes Pongo abelii 69_2 Sumatran orangutan 1556 624
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1288 453
No Yes Macaca mulatta 69_1 Rhesus monkey 1500 632
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1533 588
No Yes Otolemur garnettii 69_3 Small-eared galago 1321 570
No Yes Microcebus murinus 69_1 Gray mouse lemur 1041 391
No Yes Rattus norvegicus 69_3.4 Norway rat 1732 903
No Yes Mus musculus 69_38 House mouse 1972 891
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1059 356
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1290 591
No Yes Cavia porcellus 69_3 Domestic guinea pig 1344 564
No Yes Oryctolagus cuniculus 69_2 Rabbit 1539 684
No Yes Ochotona princeps 69 American pika 1041 343
No Yes Tupaia belangeri 69 Northern tree shrew 1007 471
No Yes Sus scrofa 69_10.2 Pig 1199 551
No Yes Bos taurus 69_3.1 Cattle 1574 625
No Yes Vicugna pacos 69_1 Alpaca 640 222
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1191 367
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1549 592
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1530 590
No Yes Canis familiaris 69_3.1 Dog 1566 569
No Yes Felis catus 69 Domestic cat 944 359
No Yes Equus caballus 69_2 Horse 1667 700
No Yes Myotis lucifugus 69_2.0 Little brown bat 2024 1002
No Yes Pteropus vampyrus 69_1 Large flying fox 1200 401
No Yes Sorex araneus 69_1 European shrew 942 539
No Yes Erinaceus europaeus 69 Western European hedgehog 969 405
No Yes Procavia capensis 69_1 Cape rock hyrax 1092 373
No Yes Loxodonta africana 69_3 African savanna elephant 1489 676
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1087 548
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 816 331
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 599 216
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1039 352
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1370 565
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1845 701
No Yes Ornithorhynchus anatinus 69_5 Platypus 1187 598
No Yes Petromyzon marinus 69_7.0 Sea lamprey 493 121
No Yes Meleagris gallopavo 69_2 Turkey 861 311
No Yes Gallus gallus 69_2 Chicken 1123 484
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 807 311
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1347 543
No Yes Anolis carolinensis 69_2.0 Green anole 1053 397
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1516 540
No Yes Latimeria chalumnae 69_1 Coelacanth 1436 561
No Yes Gadus morhua 69_1 Atlantic cod 1277 448
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1417 522
No Yes Takifugu rubripes 69_4 Torafugu 1506 523
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1565 589
No Yes Oryzias latipes 69_1 Japanese medaka 1338 489
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1690 564
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2525 1032
No Yes Danio rerio 69_9 Zebrafish 2645 984
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 253 68
No Yes Ciona intestinalis 69 Vase tunicate 297 90
No Yes Drosophila melanogaster 69_5 Fruit fly 549 134
No Yes Caenorhabditis elegans 69_215 Roundworm 389 75
No Yes 1_050719N (meta-genome)   2 2
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   6 5
No Yes 3_Below_base_of_euphotic (meta-genome)   4 2
No Yes 4_050719Q (meta-genome)   18 11
No Yes 4_Deep_abyss (meta-genome)   4 2
No Yes 5_050719P (meta-genome)   24 13
No Yes 5_Below_upper_mesopelagic (meta-genome)   7 3
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   5 4
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   5 3
No Yes Combined (meta-genome)   23 17
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   10 10
No Yes Dump top (Dump top) (meta-genome)   14 13
No Yes Endophytic microbiome from Rice (meta-genome)   4 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   6 5
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   19 13
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 4
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   4 2
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   31 25
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   16 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   7 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   13 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   13 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   11 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   22 20
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   25 22
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   223 170
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   59 46
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   4 3
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   71 53
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   68 54
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   23 16
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   33 30
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   26 23
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1054584 274847
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   64 46
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   23 16
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   4 4
No Yes Sludge/US, Phrap Assembly (meta-genome)   4 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   62 51
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   66 61
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   15 13
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   6 5
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   10 9
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   89 74
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   81 73
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   48469 18706
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   11 10
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   50 42
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   24 22
No Yes Termite Protist Endosymbiont Community (meta-genome)   6 3
No Yes Uniprot 2018_03 genome   530434 198234
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   23 19
No Yes Global Ocean Sampling Expedition (GOS)   257 213
No Yes NCBI plasmid sequences (Plasmids)   20 12
No Yes NCBI viral sequences (Viral)   490 419
No Yes PDB chains (SCOP 1.75) (PDB)   2226 1346
No Yes Protein Data Bank (all PDB sequenc)   30731 18617
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   56242 56224
No Yes TargetDB (Targets)   4911 1902
No Yes The Salmonella enterica Pan-genome (meta-genome)   5 5
No Yes UniProt viral sequences (Viral)   2002 1819

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