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  Home > Genomes > Nomascus leucogenys 69_1.0 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Nomascus leucogenys 69_1.0

Assignment details

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Nomascus leucogenys 69_1.0 has 333 significant domains in 297 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000089   0.00000000000000777   22-124   Zf-UBP  
ENSNLEP00000000151   2.35e-19   166-241   ZZ domain  
  0.00000134   986-1041   RING finger domain, C3HC4  
  0.00304   920-962   RING finger domain, C3HC4  
ENSNLEP00000000166   6.71e-20   390-494   RING finger domain, C3HC4  
ENSNLEP00000000182   1.5e-18   131-183   RING finger domain, C3HC4  
ENSNLEP00000000240   0.00000000000000778   108-175   RING finger domain, C3HC4  
  0.0000000000152   292-358   RING finger domain, C3HC4  
ENSNLEP00000000246   6.86e-16   292-337   RING finger domain, C3HC4  
ENSNLEP00000000269   0.0000000000000415   38-104   U-box  
ENSNLEP00000000418   0.0000000000000928   42-95   RING finger domain, C3HC4  
ENSNLEP00000000460   4.2e-18   22-96   RING finger domain, C3HC4  
ENSNLEP00000000461   0.0000000418   405-456   RING finger domain, C3HC4  
ENSNLEP00000000593   0.00000000000000332   1295-1348   RING finger domain, C3HC4  
  0.0000000000389   1136-1221   RING finger domain, C3HC4  
  0.00233   1208-1276   IBR domain  
ENSNLEP00000000636   1.41e-26   280-381   Zf-UBP  
  0.000000000053   263-308   RING finger domain, C3HC4  
ENSNLEP00000000643   0.000000000000291   14-68   RING finger domain, C3HC4  
ENSNLEP00000000690   0.00000000000552   27-95   RING finger domain, C3HC4  
ENSNLEP00000000733   2.08e-16   371-427   RING finger domain, C3HC4  
ENSNLEP00000000758   0.00000261   65-127   RING finger domain, C3HC4  
ENSNLEP00000000810   3.76e-18   10-82   RING finger domain, C3HC4  
ENSNLEP00000000884   0.000000000000017   39-107   RING finger domain, C3HC4  
ENSNLEP00000000976   4.2e-23   209-276   RING finger domain, C3HC4  
ENSNLEP00000001075   0.000000000145   13-71   RING finger domain, C3HC4  
ENSNLEP00000001101   0.000000000000108   6-72   RING finger domain, C3HC4  
ENSNLEP00000001217   0.0000971   381-430   RING finger domain, C3HC4  
ENSNLEP00000001231   1.88e-20   567-614   RING finger domain, C3HC4  
ENSNLEP00000001242   5.3e-25   390-474   U-box  
ENSNLEP00000001377   0.0000000000000459   546-609   Variant RING domain  
ENSNLEP00000001639   9.54e-20   219-300   ZZ domain  
ENSNLEP00000001702   1.88e-16   1-58   ZZ domain  
ENSNLEP00000001828   0.0000000000000114   12-62   RING finger domain, C3HC4  
ENSNLEP00000001837   0.00000000123   519-568   RING finger domain, C3HC4  
ENSNLEP00000002042   9.71e-16   26-110   RING finger domain, C3HC4  
  0.00000000000165   189-228   RING finger domain, C3HC4  
  0.0000000424   103-168   IBR domain  
ENSNLEP00000002053   3.74e-36   288-358   RING finger domain, C3HC4  
ENSNLEP00000002061   0.0000000404   491-538   RING finger domain, C3HC4  
ENSNLEP00000002062   0.000000294   311-356   RING finger domain, C3HC4  
ENSNLEP00000002300   2.29e-16   236-298   RING finger domain, C3HC4  
ENSNLEP00000002314   1.2e-20   106-169   RING finger domain, C3HC4  
ENSNLEP00000002337   3.74e-21   297-362   RING finger domain, C3HC4  
ENSNLEP00000002410   0.00000000682   238-290   RING finger domain, C3HC4  
ENSNLEP00000002413   0.000000000000259   273-341   RING finger domain, C3HC4  
ENSNLEP00000002512   3.88e-22   26-120   Zf-UBP  
ENSNLEP00000002649   0.00000000000201   276-326   RING finger domain, C3HC4  
ENSNLEP00000002707   0.000000093   302-365   RING finger domain, C3HC4  
ENSNLEP00000003097   0.0000000000424   39-112   RING finger domain, C3HC4  
ENSNLEP00000003103   4.01e-21   192-244   RING finger domain, C3HC4  
ENSNLEP00000003122   1e-24   231-306   Variant RING domain  
ENSNLEP00000003124   1.37e-19   20-106   RING finger domain, C3HC4  
ENSNLEP00000003134   0.000000000000111   7-52   RING finger domain, C3HC4  
  0.0000396   179-211   IBR domain  
ENSNLEP00000003285   0.000000759   16-64   ZZ domain  
ENSNLEP00000003324   0.0000000000000442   750-810   RING finger domain, C3HC4  
ENSNLEP00000003386   0.00000135   517-568   RING finger domain, C3HC4  
ENSNLEP00000003479   6.13e-17   609-670   RING finger domain, C3HC4  
ENSNLEP00000003491   0.000000000000042   1-67   RING finger domain, C3HC4  
ENSNLEP00000003496   0.0000000221   284-339   RING finger domain, C3HC4  
ENSNLEP00000003609   0.00000000899   1760-1811   RING finger domain, C3HC4  
ENSNLEP00000003611   0.00000000000053   9-73   RING finger domain, C3HC4  
ENSNLEP00000003622   0.0000155   627-681   RING finger domain, C3HC4  
ENSNLEP00000003667   0.0000159   770-839   RING finger domain, C3HC4  
ENSNLEP00000003688   1.72e-19   10-86   RING finger domain, C3HC4  
ENSNLEP00000003710   5.89e-16   127-207   RING finger domain, C3HC4  
  0.000000000000578   294-349   RING finger domain, C3HC4  
  0.00000000000155   198-267   IBR domain  
ENSNLEP00000003804   0.00000000000055   58-137   RING finger domain, C3HC4  
  0.000000000000971   224-278   RING finger domain, C3HC4  
  0.0000000000109   129-197   IBR domain  
ENSNLEP00000003850   2.12e-20   222-289   RING finger domain, C3HC4  
ENSNLEP00000003857   1.53e-20   22-135   Zf-UBP  
ENSNLEP00000003913   0.0000000000000163   431-480   RING finger domain, C3HC4  
ENSNLEP00000003930   0.000000000000778   18-111   RING finger domain, C3HC4  
ENSNLEP00000003940   8.84e-19   4-77   RING finger domain, C3HC4  
ENSNLEP00000004055   0.00000286   72-138   RING finger domain, C3HC4  
ENSNLEP00000004112   0.0000648   852-881   RING finger domain, C3HC4  
ENSNLEP00000004312   0.000000000167   28-80   RING finger domain, C3HC4  
ENSNLEP00000004542   1.01e-19   320-370   RING finger domain, C3HC4  
ENSNLEP00000004551   0.000000765   443-491   RING finger domain, C3HC4  
ENSNLEP00000004556   6.19e-18   3-85   RING finger domain, C3HC4  
ENSNLEP00000004628   0.000000000000013   16-88   RING finger domain, C3HC4  
ENSNLEP00000004639   7.83e-20   443-509   RING finger domain, C3HC4  
ENSNLEP00000004729   0.00000424   36-87   RING finger domain, C3HC4  
ENSNLEP00000004762   3.53e-17   1139-1195   RING finger domain, C3HC4  
ENSNLEP00000005162   6.86e-19   546-611   RING finger domain, C3HC4  
ENSNLEP00000005197   1.21e-20   9-84   RING finger domain, C3HC4  
ENSNLEP00000005223   6.28e-18   34-92   RING finger domain, C3HC4  
ENSNLEP00000005360   0.0000115   55-102   RING finger domain, C3HC4  
ENSNLEP00000005461   0.000000471   143-219   RING finger domain, C3HC4  
ENSNLEP00000005535   2.87e-18   3-90   RING finger domain, C3HC4  
ENSNLEP00000005581   0.000000000000134   654-716   Variant RING domain  
ENSNLEP00000005586   2.29e-18   6-80   RING finger domain, C3HC4  
ENSNLEP00000005633   4.62e-34   28-110   RING finger domain, C3HC4  
ENSNLEP00000005700   0.000000000000073   1950-1997   RING finger domain, C3HC4  
ENSNLEP00000005726   0.000000000139   227-297   RING finger domain, C3HC4  
ENSNLEP00000005733   0.0000000389   14-89   RING finger domain, C3HC4  
ENSNLEP00000005813   0.00000000379   55-127   RING finger domain, C3HC4  
ENSNLEP00000005833   2.24e-37   175-283   Zf-UBP  
ENSNLEP00000005888   1.18e-27   2-95   Zf-UBP  
ENSNLEP00000005983   0.0000000000000167   59-129   RING finger domain, C3HC4  
ENSNLEP00000006014   6.19e-22   6-80   RING finger domain, C3HC4  
ENSNLEP00000006032   2.59e-19   10-82   RING finger domain, C3HC4  
ENSNLEP00000006051   0.0000000000858   9-84   RING finger domain, C3HC4  
ENSNLEP00000006070   1.06e-20   6-80   RING finger domain, C3HC4  
ENSNLEP00000006108   0.0000706   1322-1376   RING finger domain, C3HC4  
ENSNLEP00000006112   1.46e-22   18-91   RING finger domain, C3HC4  
ENSNLEP00000006239   0.0000000247   347-413   RING finger domain, C3HC4  
ENSNLEP00000006326   1.17e-20   270-331   RING finger domain, C3HC4  
ENSNLEP00000006339   0.000000000803   27-78   U-box  
  0.0000159   221-274   U-box  
ENSNLEP00000006346   0.000000402   26-59,94-102   RING finger domain, C3HC4  
ENSNLEP00000006499   0.00000000000000377   94-148   RING finger domain, C3HC4  
ENSNLEP00000006610   8.94e-20   528-595   RING finger domain, C3HC4  
ENSNLEP00000006683   3.09e-20   271-335   RING finger domain, C3HC4  
ENSNLEP00000006723   0.00000000000667   156-241   RING finger domain, C3HC4  
ENSNLEP00000006828   1.44e-23   207-274   RING finger domain, C3HC4  
ENSNLEP00000006929   1.44e-16   33-105   RING finger domain, C3HC4  
ENSNLEP00000007043   2.71e-27   4-99   Zf-UBP  
ENSNLEP00000007105   6.36e-33   132-239   Zf-UBP  
ENSNLEP00000007176   0.00000000000000442   45-119   RING finger domain, C3HC4  
ENSNLEP00000007257   0.000000000000106   219-289   RING finger domain, C3HC4  
ENSNLEP00000007676   8.12e-21   219-297   ZZ domain  
ENSNLEP00000007792   6.09e-16   47-108   RING finger domain, C3HC4  
ENSNLEP00000007796   5.42e-18   26-86   RING finger domain, C3HC4  
ENSNLEP00000007873   0.00000000000000918   76-131   Variant RING domain  
ENSNLEP00000007874   1.77e-18   8-80   RING finger domain, C3HC4  
ENSNLEP00000007903   9.42e-19   210-290   ZZ domain  
  0.0000000000000353   332-393   RING finger domain, C3HC4  
  0.00000000689   138-204   RING finger domain, C3HC4  
ENSNLEP00000008029   1.66e-16   24-80   RING finger domain, C3HC4  
ENSNLEP00000008031   0.000000000000134   10-67   RING finger domain, C3HC4  
ENSNLEP00000008184   2.47e-18   289-345   RING finger domain, C3HC4  
  0.00000000000000707   135-222   RING finger domain, C3HC4  
  0.00000000304   208-277   IBR domain  
ENSNLEP00000008295   2.83e-21   52-126   ZZ domain  
  0.0000000442   933-993   RING finger domain, C3HC4  
  0.00232   804-848   RING finger domain, C3HC4  
  0.00795   851-896   RING finger domain, C3HC4  
ENSNLEP00000008313   1.63e-17   33-105   RING finger domain, C3HC4  
ENSNLEP00000008399   0.0000000271   1245-1297   RING finger domain, C3HC4  
ENSNLEP00000008429   0.0000000000000773   6-56   RING finger domain, C3HC4  
ENSNLEP00000008514   0.00000000000000353   23-73   RING finger domain, C3HC4  
ENSNLEP00000008617   1.7e-17   7-81   RING finger domain, C3HC4  
ENSNLEP00000008667   6.47e-19   203-284   ZZ domain  
ENSNLEP00000008789   2.4e-48   26-122   RING finger domain, C3HC4  
ENSNLEP00000008863   0.000000000000053   159-214   Variant RING domain  
ENSNLEP00000008957   0.0000000389   654-701   RING finger domain, C3HC4  
ENSNLEP00000008980   4.15e-28   984-1068   U-box  
ENSNLEP00000009005   0.000000000196   821-861   RING finger domain, C3HC4  
ENSNLEP00000009017   8.17e-43   356-434   RING finger domain, C3HC4  
ENSNLEP00000009130   0.000000000000052   56-114   RING finger domain, C3HC4  
ENSNLEP00000009159   8.24e-18   579-665   ZZ domain  
ENSNLEP00000009216   0.00000128   440-497   RING finger domain, C3HC4  
ENSNLEP00000009342   6.19e-18   82-146   RING finger domain, C3HC4  
ENSNLEP00000009433   0.00000000000016   181-244   RING finger domain, C3HC4  
ENSNLEP00000009480   8.73e-19   8-78   RING finger domain, C3HC4  
ENSNLEP00000009481   4.42e-16   8-79   RING finger domain, C3HC4  
ENSNLEP00000009543   0.0000000000196   254-304   RING finger domain, C3HC4  
ENSNLEP00000009544   0.0000000000196   254-304   RING finger domain, C3HC4  
ENSNLEP00000009627   3.18e-23   566-662   Zf-UBP  
ENSNLEP00000009652   0.000000202   300-346   RING finger domain, C3HC4  
ENSNLEP00000009710   1.77e-17   12-73   ZZ domain  
ENSNLEP00000009715   0.0000000000353   143-190   RING finger domain, C3HC4  
ENSNLEP00000009758   0.0000000000000376   277-334   RING finger domain, C3HC4  
ENSNLEP00000009787   4.2e-19   7-78   RING finger domain, C3HC4  
ENSNLEP00000009965   0.0000000000000042   16-67   RING finger domain, C3HC4  
ENSNLEP00000009971   6.8e-18   271-318   RING finger domain, C3HC4  
ENSNLEP00000009975   1.85e-24   220-299   U-box  
ENSNLEP00000010063   0.00000000000000561   22-89   RING finger domain, C3HC4  
ENSNLEP00000010240   0.000000000000353   103-154   RING finger domain, C3HC4  
ENSNLEP00000010353   0.000000000000801   7-71   RING finger domain, C3HC4  
ENSNLEP00000010389   0.000000000000808   3-69   RING finger domain, C3HC4  
ENSNLEP00000010523   0.000000000778   27-74   RING finger domain, C3HC4  
ENSNLEP00000010557   0.00000816   107-155   RING finger domain, C3HC4  
ENSNLEP00000010750   0.000000000106   54-113   RING finger domain, C3HC4  
ENSNLEP00000010787   0.00000000106   128-208   RING finger domain, C3HC4  
ENSNLEP00000010828   0.0000000000000011   1-64   RING finger domain, C3HC4  
ENSNLEP00000010920   0.00000000000000103   2-88   RING finger domain, C3HC4  
  0.000636   108-161   ZZ domain  
ENSNLEP00000010979   5.96e-19   7-79   RING finger domain, C3HC4  
ENSNLEP00000011122   0.000000000023   19-73   RING finger domain, C3HC4  
ENSNLEP00000011123   0.000000000000164   671-735   RING finger domain, C3HC4  
ENSNLEP00000011188   0.000000000000131   14-109   RING finger domain, C3HC4  
ENSNLEP00000011193   0.00000000000833   128-188   RING finger domain, C3HC4  
ENSNLEP00000011523   0.00000000267   313-378   RING finger domain, C3HC4  
ENSNLEP00000011573   0.00000000000381   352-417   IBR domain  
  0.00000000000652   431-485   RING finger domain, C3HC4  
  0.00000000013   280-323   RING finger domain, C3HC4  
ENSNLEP00000011789   5.06e-16   810-873   ZZ domain  
ENSNLEP00000011841   8.58e-19   215-301   RING finger domain, C3HC4  
  0.0000000000000406   390-447   RING finger domain, C3HC4  
  0.000000000000848   290-356   RING finger domain, C3HC4  
ENSNLEP00000011842   2.71e-24   38-122   Zf-UBP  
ENSNLEP00000011912   0.000000000004   1700-1747   ZZ domain  
ENSNLEP00000011949   0.00000000000000373   8-71   RING finger domain, C3HC4  
ENSNLEP00000012031   0.00000000000326   278-328   RING finger domain, C3HC4  
ENSNLEP00000012359   8.59e-22   826-914   ZZ domain  
ENSNLEP00000012512   6.85e-16   29-95   RING finger domain, C3HC4  
ENSNLEP00000012568   0.000000000141   1-52   RING finger domain, C3HC4  
ENSNLEP00000012611   0.0000000087   22-67   RING finger domain, C3HC4  
ENSNLEP00000012734   4.64e-18   5-80   RING finger domain, C3HC4  
ENSNLEP00000012746   9.15e-18   8-79   RING finger domain, C3HC4  
ENSNLEP00000012768   4.42e-19   5-80   RING finger domain, C3HC4  
ENSNLEP00000012942   0.000000000000589   17-111   RING finger domain, C3HC4  
ENSNLEP00000012943   0.000000000193   3-76   RING finger domain, C3HC4  
ENSNLEP00000012951   0.000000000000127   3-73   RING finger domain, C3HC4  
ENSNLEP00000013395   2.16e-21   3-90   RING finger domain, C3HC4  
ENSNLEP00000013584   1.41e-17   391-448   RING finger domain, C3HC4  
ENSNLEP00000013612   0.00000114   64-125   RING finger domain, C3HC4  
ENSNLEP00000013688   2.21e-20   288-341   RING finger domain, C3HC4  
ENSNLEP00000013691   2.65e-18   628-680   RING finger domain, C3HC4  
ENSNLEP00000013751   2.07e-16   4-51   RING finger domain, C3HC4  
ENSNLEP00000013938   0.0000000000000971   23-67   RING finger domain, C3HC4  
ENSNLEP00000014030   6.19e-18   950-998   RING finger domain, C3HC4  
ENSNLEP00000014090   4.95e-21   5-82   RING finger domain, C3HC4  
ENSNLEP00000014211   0.0000000000000015   2-60   Variant RING domain  
ENSNLEP00000014262   0.00000000783   25-64   RING finger domain, C3HC4  
  0.0339   149-199   ZZ domain  
ENSNLEP00000014420   0.0000000000000494   122-178   Variant RING domain  
ENSNLEP00000014421   0.00000000126   432-480   RING finger domain, C3HC4  
ENSNLEP00000014458   1.17e-20   241-328   RING finger domain, C3HC4  
ENSNLEP00000014460   0.0000000000278   25-74   RING finger domain, C3HC4  
ENSNLEP00000014629   1.77e-38   1-102   RING finger domain, C3HC4  
ENSNLEP00000014657   0.0000000000000789   208-262   ZZ domain  
ENSNLEP00000014710   5.82e-20   92-138   RING finger domain, C3HC4  
ENSNLEP00000014893   0.0000000000000053   67-120   Variant RING domain  
ENSNLEP00000014930   4e-20   1-115   Zf-UBP  
ENSNLEP00000014961   0.00000000454   403-449   RING finger domain, C3HC4  
ENSNLEP00000015001   0.000000000736   2-51   RING finger domain, C3HC4  
ENSNLEP00000015067   0.000000000000707   10-79   RING finger domain, C3HC4  
ENSNLEP00000015125   0.00000578   299-363   RING finger domain, C3HC4  
ENSNLEP00000015207   6.42e-20   359-425   RING finger domain, C3HC4  
ENSNLEP00000015331   0.0000000000000165   8-73   Variant RING domain  
ENSNLEP00000015447   0.0000000648   273-315   RING finger domain, C3HC4  
ENSNLEP00000015610   0.000000000000795   14-69   RING finger domain, C3HC4  
ENSNLEP00000015710   7.07e-19   33-92   RING finger domain, C3HC4  
ENSNLEP00000015762   0.000000000012   115-158   RING finger domain, C3HC4  
ENSNLEP00000015852   1.06e-19   389-492   RING finger domain, C3HC4  
ENSNLEP00000016239   2.58e-18   4-75   RING finger domain, C3HC4  
ENSNLEP00000016246   0.00000000000114   604-661   RING finger domain, C3HC4  
ENSNLEP00000016546   0.0000000000000181   3-55   U-box  
ENSNLEP00000016725   3.3e-19   36-147   Zf-UBP  
ENSNLEP00000016732   4.59e-20   270-324   RING finger domain, C3HC4  
ENSNLEP00000016742   0.0000000000167   2-62   RING finger domain, C3HC4  
ENSNLEP00000016764   0.00000303   55-82   RING finger domain, C3HC4  
ENSNLEP00000016903   0.000000000000247   169-227   RING finger domain, C3HC4  
  0.00000000918   103-167   IBR domain  
  0.00000265   26-97   RING finger domain, C3HC4  
ENSNLEP00000016913   0.000000000259   303-355   RING finger domain, C3HC4  
ENSNLEP00000016967   0.00000000000000122   19-106   RING finger domain, C3HC4  
  0.00265   124-179   ZZ domain  
ENSNLEP00000016996   2.7e-19   610-677   RING finger domain, C3HC4  
ENSNLEP00000017003   2.24e-21   336-394   RING finger domain, C3HC4  
  1.01e-16   182-265   RING finger domain, C3HC4  
  0.00000000226   257-324   IBR domain  
ENSNLEP00000017112   0.00000000217   505-558   RING finger domain, C3HC4  
ENSNLEP00000017165   0.00000000000683   35-80   RING finger domain, C3HC4  
ENSNLEP00000017401   7.07e-22   9-81   RING finger domain, C3HC4  
ENSNLEP00000017403   2.26e-21   9-90   RING finger domain, C3HC4  
ENSNLEP00000017441   6.24e-16   445-498   RING finger domain, C3HC4  
  0.00000287   137-169   RING finger domain, C3HC4  
ENSNLEP00000017469   0.0000000299   52-96   RING finger domain, C3HC4  
ENSNLEP00000017631   1.65e-20   262-320   RING finger domain, C3HC4  
ENSNLEP00000017797   0.000000000137   349-407   RING finger domain, C3HC4  
ENSNLEP00000018034   2.7e-17   277-346   RING finger domain, C3HC4  
ENSNLEP00000018388   0.00000000000707   197-236   RING finger domain, C3HC4  
ENSNLEP00000018432   9.42e-19   7-79   RING finger domain, C3HC4  
ENSNLEP00000018440   5.65e-21   3044-3132   ZZ domain  
ENSNLEP00000018479   0.0000000217   1435-1488   RING finger domain, C3HC4  
ENSNLEP00000018495   0.0000000000000374   103-171   RING finger domain, C3HC4  
ENSNLEP00000018529   0.0000000381   517-567   RING finger domain, C3HC4  
ENSNLEP00000018559   0.000000000000109   781-850   IBR domain  
  0.0000000565   698-763   RING finger domain, C3HC4  
  0.0000102   861-933   RING finger domain, C3HC4  
ENSNLEP00000018562   3.76e-20   329-411   RING finger domain, C3HC4  
  2.5e-16   511-560   RING finger domain, C3HC4  
  0.000000229   403-485   RING finger domain, C3HC4  
ENSNLEP00000018609   0.000000000412   8-58   RING finger domain, C3HC4  
ENSNLEP00000018728   9.71e-17   16-100   RING finger domain, C3HC4  
  0.0000000000000683   173-220   RING finger domain, C3HC4  
  0.0000000127   92-159   IBR domain  
ENSNLEP00000018730   3.81e-40   20-105   RING finger domain, C3HC4  
ENSNLEP00000018741   4.09e-18   128-198   RING finger domain, C3HC4  
ENSNLEP00000018748   0.00000000000306   1663-1709   ZZ domain  
ENSNLEP00000018888   0.00000000412   649-710   IBR domain  
  0.00000000812   719-773   RING finger domain, C3HC4  
  0.00000954   566-645   RING finger domain, C3HC4  
ENSNLEP00000019050   0.0000000000027   4047-4091   RING finger domain, C3HC4  
ENSNLEP00000019102   0.0000000795   333-387   RING finger domain, C3HC4  
ENSNLEP00000019193   0.000000000000377   249-298   RING finger domain, C3HC4  
ENSNLEP00000019249   4.71e-18   5-80   RING finger domain, C3HC4  
ENSNLEP00000019258   0.00000000016   11-70   RING finger domain, C3HC4  
ENSNLEP00000019416   6.18e-16   75-131   Variant RING domain  
ENSNLEP00000019441   0.000000000309   635-690   RING finger domain, C3HC4  
ENSNLEP00000019474   0.0000000128   42-99   RING finger domain, C3HC4  
ENSNLEP00000019594   0.000000127   320-366   RING finger domain, C3HC4  
ENSNLEP00000019711   9.13e-20   57-103   RING finger domain, C3HC4  
ENSNLEP00000019746   1.39e-17   7-81   RING finger domain, C3HC4  
ENSNLEP00000019753   1.75e-20   14-85   RING finger domain, C3HC4  
ENSNLEP00000019788   0.0000000304   4426-4501   RING finger domain, C3HC4  
ENSNLEP00000019910   0.0000000000164   17-64   RING finger domain, C3HC4  
ENSNLEP00000020220   0.00000000000087   10-66   RING finger domain, C3HC4  
ENSNLEP00000020551   0.0000000000000236   14-76   RING finger domain, C3HC4  
ENSNLEP00000020816   0.0000000000994   906-966   RING finger domain, C3HC4  
ENSNLEP00000020891   0.00000000000000275   104-159   Variant RING domain  
ENSNLEP00000020901   0.000000000401   8-58   RING finger domain, C3HC4  
ENSNLEP00000020969   0.0000000000000146   217-287   RING finger domain, C3HC4  
ENSNLEP00000020976   1.18e-16   154-215   RING finger domain, C3HC4  
ENSNLEP00000021021   0.00000000006   1808-1868   ZZ domain  
  0.000000000753   1766-1817   ZZ domain  
ENSNLEP00000021044   1.27e-23   6-79   RING finger domain, C3HC4  
ENSNLEP00000021048   4.71e-22   5-83   RING finger domain, C3HC4  
ENSNLEP00000021081   0.00000777   149-226   RING finger domain, C3HC4  
ENSNLEP00000021082   3.53e-29   24-114   RING finger domain, C3HC4  
  2.83e-23   362-445   RING finger domain, C3HC4  
ENSNLEP00000021091   2.65e-23   4-89   RING finger domain, C3HC4  
ENSNLEP00000021165   2.28e-20   213-278   RING finger domain, C3HC4  
ENSNLEP00000021186   0.00000311   667-716   RING finger domain, C3HC4  
ENSNLEP00000021359   1.5e-16   149-195   RING finger domain, C3HC4  
ENSNLEP00000021436   2.83e-23   8-91   Zf-UBP  
ENSNLEP00000021767   0.0000000000000966   40-88   RING finger domain, C3HC4  
ENSNLEP00000021805   1.11e-18   64-135   RING finger domain, C3HC4  
ENSNLEP00000021806   1.74e-26   268-352   RING finger domain, C3HC4  
  0.0212   174-218   RING finger domain, C3HC4  
ENSNLEP00000021902   6.83e-18   35-108   RING finger domain, C3HC4  
ENSNLEP00000022165   0.00000000000000183   10-71   RING finger domain, C3HC4  
ENSNLEP00000022237   0.0000000000353   260-310   RING finger domain, C3HC4  
ENSNLEP00000022304   8.25e-24   498-571   Variant RING domain  
ENSNLEP00000022376   5.89e-17   193-299   Zf-UBP  
ENSNLEP00000022564   0.0000000959   24-79   RING finger domain, C3HC4  
ENSNLEP00000022610   0.00000164   55-104   RING finger domain, C3HC4  
ENSNLEP00000022664   0.000000000000596   307-369   RING finger domain, C3HC4  
ENSNLEP00000022705   6.41e-18   130-182   RING finger domain, C3HC4  
ENSNLEP00000022793   1.15e-19   9-79   RING finger domain, C3HC4  
ENSNLEP00000023037   0.000000000000667   64-118   RING finger domain, C3HC4  
ENSNLEP00000023064   3.95e-17   76-125   RING finger domain, C3HC4  
ENSNLEP00000023080   0.0000000231   373-428   RING finger domain, C3HC4  
ENSNLEP00000023182   2.61e-20   216-278   RING finger domain, C3HC4  
 
Weak hits:
ENSNLEP00000001962   0.0226   61-105   RING finger domain, C3HC4  
ENSNLEP00000003424   0.00494   658-690   RING finger domain, C3HC4  
ENSNLEP00000003640   0.00129   23-77   RING finger domain, C3HC4  
ENSNLEP00000005714   0.00477   1155-1212   RING finger domain, C3HC4  
ENSNLEP00000005966   0.0117   13-44   RING finger domain, C3HC4  
ENSNLEP00000006634   0.000365   34-110   RING finger domain, C3HC4  
ENSNLEP00000007420   0.0418   349-391   RING finger domain, C3HC4  
ENSNLEP00000007421   0.0418   349-391   RING finger domain, C3HC4  
ENSNLEP00000008696   0.0328   157-210   RING finger domain, C3HC4  
ENSNLEP00000010528   0.00129   613-650   RING finger domain, C3HC4  
ENSNLEP00000010895   0.00219   967-997   ZZ domain  
ENSNLEP00000012049   0.0146   298-340   RING finger domain, C3HC4  
ENSNLEP00000012348   0.0129   1244-1294   RING finger domain, C3HC4  
ENSNLEP00000012838   0.000918   737-807   RING finger domain, C3HC4  
ENSNLEP00000013007   0.00706   24-55   RING finger domain, C3HC4  
ENSNLEP00000013098   0.000177   79-139   RING finger domain, C3HC4  
ENSNLEP00000013851   0.0512   344-409   RING finger domain, C3HC4  
ENSNLEP00000014658   0.000459   1790-1855   ZZ domain  
ENSNLEP00000015725   0.00187   274-321   RING finger domain, C3HC4  
ENSNLEP00000017030   0.0424   385-435   RING finger domain, C3HC4  
ENSNLEP00000017365   0.00106   436-482   RING finger domain, C3HC4  
ENSNLEP00000018230   0.000145   2-45   RING finger domain, C3HC4  
ENSNLEP00000018744   0.0053   331-386   IBR domain  
ENSNLEP00000018953   0.0168   175-213   RING finger domain, C3HC4  
ENSNLEP00000020559   0.00765   53-93   RING finger domain, C3HC4  
ENSNLEP00000020620   0.000106   65-94   RING finger domain, C3HC4  
ENSNLEP00000021137   0.00338   6-54   RING finger domain, C3HC4  
ENSNLEP00000021790   0.00306   14-71   Zf-UBP  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.