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  Home > Genomes > Cavia porcellus 76_3 > Snake toxin-like domains


Snake toxin-like superfamily domain assignments
in
Cavia porcellus 76_3

Assignment details

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Cavia porcellus 76_3 has 41 significant domains in 38 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000000426   0.0000916   141-209   Snake venom toxins  
  0.0364   42-115   Extracellular domain of cell surface receptors  
ENSCPOP00000001026   0.0000000000714   28-104   Extracellular domain of cell surface receptors  
ENSCPOP00000001467   0.0000000000000357   30-112   Extracellular domain of cell surface receptors  
ENSCPOP00000001497   0.0000343   34-101   Extracellular domain of cell surface receptors  
ENSCPOP00000001632   0.00000293   139-201   Extracellular domain of cell surface receptors  
  0.0161   55-116   Snake venom toxins  
ENSCPOP00000001845   0.000000000245   58-138   Extracellular domain of cell surface receptors  
ENSCPOP00000001848   0.00000000139   44-133   Snake venom toxins  
ENSCPOP00000002075   1.24e-24   28-125   Extracellular domain of cell surface receptors  
  0.0000000673   137-226   Extracellular domain of cell surface receptors  
ENSCPOP00000003516   0.0000000000774   49-130   Snake venom toxins  
ENSCPOP00000003562   0.00000000000492   13-92   Snake venom toxins  
ENSCPOP00000003737   0.0000000000507   22-108   Extracellular domain of cell surface receptors  
ENSCPOP00000004036   0.00000000000551   22-105   Snake venom toxins  
ENSCPOP00000004482   0.0000000000527   5-88   Extracellular domain of cell surface receptors  
ENSCPOP00000006088   0.000000000098   3-85   Extracellular domain of cell surface receptors  
ENSCPOP00000006091   0.0000000000905   2-82   Extracellular domain of cell surface receptors  
ENSCPOP00000006410   0.000000000342   2-77   Extracellular domain of cell surface receptors  
ENSCPOP00000006926   0.000000000000264   45-133   Snake venom toxins  
ENSCPOP00000007705   1.49e-32   56-149   Extracellular domain of cell surface receptors  
ENSCPOP00000007891   0.000000000367   42-104   Snake venom toxins  
ENSCPOP00000008178   1.69e-35   25-118   Extracellular domain of cell surface receptors  
ENSCPOP00000008602   8.55e-20   13-111   Extracellular domain of cell surface receptors  
ENSCPOP00000010007   4.58e-38   94-188   Extracellular domain of cell surface receptors  
  2.25e-19   193-274   Extracellular domain of cell surface receptors  
  0.000000000000146   6-82   Extracellular domain of cell surface receptors  
ENSCPOP00000011856   0.00000000000118   16-93   Snake venom toxins  
ENSCPOP00000013053   5.22e-47   9-120   Extracellular domain of cell surface receptors  
ENSCPOP00000013417   0.0000000000851   29-109   Extracellular domain of cell surface receptors  
ENSCPOP00000013651   0.0000181   328-384   Snake venom toxins  
  0.000101   133-206   Snake venom toxins  
  0.00517   238-308   Extracellular domain of cell surface receptors  
  0.00714   44-111   Extracellular domain of cell surface receptors  
ENSCPOP00000014953   0.00000000000000256   22-124   Extracellular domain of cell surface receptors  
ENSCPOP00000015426   0.0000163   7-86   Extracellular domain of cell surface receptors  
ENSCPOP00000016347   0.00000432   18-60   Extracellular domain of cell surface receptors  
ENSCPOP00000016892   0.000000000122   1-83   Snake venom toxins  
ENSCPOP00000017576   0.00000687   120-184   Extracellular domain of cell surface receptors  
  0.000183   26-113   Snake venom toxins  
ENSCPOP00000017777   0.000000000115   28-104   Extracellular domain of cell surface receptors  
ENSCPOP00000018932   7.77e-20   59-140   Extracellular domain of cell surface receptors  
ENSCPOP00000019766   0.00000000000065   15-93   Snake venom toxins  
ENSCPOP00000020379   0.0000000952   38-99   Extracellular domain of cell surface receptors  
ENSCPOP00000020671   0.0000000000000268   17-88   Snake venom toxins  
ENSCPOP00000020695   0.0000000122   26-103   Snake venom toxins  
ENSCPOP00000020721   0.000000000000288   113-197   Extracellular domain of cell surface receptors  
  0.00595   6-91   Extracellular domain of cell surface receptors  
 
Weak hits:
ENSCPOP00000006575   0.00128   190-269   Snake venom toxins  
ENSCPOP00000009693   0.00977   71-139   Snake venom toxins  
ENSCPOP00000011480   0.0182   8-47   Snake venom toxins  
ENSCPOP00000018906   0.0769   9-33   Snake venom toxins  
ENSCPOP00000020420   0.00952   17-107   Snake venom toxins  
ENSCPOP00000020426   0.0011   21-96   Snake venom toxins  

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Select to display   Genome       Domains   Proteins
No Yes ALL   42909 42909
No Yes Homo sapiens 76_38 Human 181 159
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 41 38
No Yes Gorilla gorilla 76_3.1 Western gorilla 50 45
No Yes Pongo abelii 76_2 Sumatran orangutan 41 36
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 46 40
No Yes Papio anubis 76 Olive baboon 53 45
No Yes Macaca mulatta 76_1 Rhesus monkey 64 53
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 81 69
No Yes Otolemur garnettii 76_3 Small-eared galago 45 39
No Yes Microcebus murinus 76_1 Gray mouse lemur 34 29
No Yes Rattus norvegicus 76_5.0 Norway rat 63 56
No Yes Mus musculus 76_38 House mouse 138 132
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 30 27
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 38 34
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 47 41
No Yes Cavia porcellus 76_3 Domestic guinea pig 41 38
No Yes Oryctolagus cuniculus 76_2 Rabbit 35 31
No Yes Ochotona princeps 76 American pika 30 27
No Yes Tupaia belangeri 76 Northern tree shrew 24 23
No Yes Sus scrofa 76_10.2 Pig 50 41
No Yes Bos taurus 76_3.1 Cattle 42 38
No Yes Ovis aries 76_3.1 Sheep 58 47
No Yes Vicugna pacos 76_1 Alpaca 19 17
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 34 30
No Yes Mustela putorius furo 76_1.0 Domestic ferret 39 34
No Yes Ailuropoda melanoleuca 76_1 Giant panda 47 41
No Yes Canis familiaris 76_3.1 Dog 54 49
No Yes Felis catus 76_6.2 Domestic cat 46 40
No Yes Equus caballus 76_2 Horse 40 34
No Yes Myotis lucifugus 76_2.0 Little brown bat 40 35
No Yes Pteropus vampyrus 76_1 Large flying fox 30 28
No Yes Sorex araneus 76_1 European shrew 20 18
No Yes Erinaceus europaeus 76 Western European hedgehog 24 24
No Yes Procavia capensis 76_1 Cape rock hyrax 33 30
No Yes Loxodonta africana 76_3 African savanna elephant 45 42
No Yes Echinops telfairi 76 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 46 42
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 14
No Yes Macropus eugenii 76_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 43 39
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 35 30
No Yes Ornithorhynchus anatinus 76_5 Platypus 25 25
No Yes Saccoglossus kowalevskii v3.0   48 48
No Yes Petromyzon marinus 76_7.0 Sea lamprey 14 14
No Yes Meleagris gallopavo 76_2 Turkey 34 33
No Yes Gallus gallus 76_4 Chicken 27 26
No Yes Anas platyrhynchos 76_1.0 Mallard 25 25
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 27 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 28 27
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 47 40
No Yes Anolis carolinensis 76_2.0 Green anole 60 48
No Yes Xenopus laevis African clawed frog 66 64
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 74 52
No Yes Latimeria chalumnae 76_1 Coelacanth 25 24
No Yes Lepisosteus oculatus 76 Spotted gar 39 34
No Yes Gadus morhua 76_1 Atlantic cod 25 25
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 36 36
No Yes Takifugu rubripes 76_4 Torafugu 69 68
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 36 36
No Yes Oryzias latipes 76_1 Japanese medaka 37 35
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 30 28
No Yes Poecilia formosa 76 Amazon molly 36 31
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 66 55
No Yes Astyanax mexicanus 76 Mexican tetra 38 33
No Yes Danio rerio 76_9 Zebrafish 66 54
No Yes Oikopleura dioica   9 9
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 31 31
No Yes Ciona intestinalis 76 Vase tunicate 33 33
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 9 9
No Yes Adineta vaga   60 60
No Yes Octopus bimaculoides 280   14 14
No Yes Crassostrea gigas 22 Pacific oyster 37 34
No Yes Lottia gigantea Owl limpet 15 15
No Yes Helobdella robusta   12 11
No Yes Capitella sp. I   27 26
No Yes Danaus plexippus OGS1.0 Monarch butterfly 10 10
No Yes Heliconius melpomene Postman butterfly 12 12
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 9 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 16 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 10
No Yes Linepithema humile v1.1 Argentine ant 10 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 9
No Yes Solenopsis invicta v.2.2.3 Red fire ant 7 7
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 11 11
No Yes Atta cephalotes v1.1   6 6
No Yes Camponotus floridanus v3.3 Florida carpenter ant 10 10
No Yes Lucilia cuprina Australian sheep blowfly 7 7
No Yes Drosophila grimshawi 1.3   12 12
No Yes Drosophila willistoni 1.3   10 10
No Yes Drosophila pseudoobscura 2.13   11 11
No Yes Drosophila persimilis 1.3   11 11
No Yes Drosophila suzukii   12 11
No Yes Drosophila yakuba 1.3   12 12
No Yes Drosophila simulans 1.3   13 13
No Yes Drosophila sechellia 1.3   13 13
No Yes Drosophila melanogaster 76_5 Fruit fly 29 29
No Yes Drosophila erecta 1.3   12 12
No Yes Drosophila ananassae 1.3   10 10
No Yes Drosophila virilis 1.2   11 11
No Yes Drosophila mojavensis 1.3   11 11
No Yes Megaselia scalaris 22   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 12 12
No Yes Culex pipiens quinquefasciatus Southern house mosquito 11 11
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 9
No Yes Tribolium castaneum 3.0 Red flour beetle 16 16
No Yes Pediculus humanus corporis (Early assembly) Human body louse 6 6
No Yes Acyrthosiphon pisum Pea aphid 7 7
No Yes Rhodnius prolixus 22   5 5
No Yes Daphnia pulex Common water flea 16 16
No Yes Strigamia maritima 22   25 24
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 14 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 7
No Yes Pristionchus pacificus   27 27
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   9 9
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 19 19
No Yes Caenorhabditis japonica   9 9
No Yes Caenorhabditis brenneri   18 18
No Yes Caenorhabditis remanei   21 21
No Yes Caenorhabditis elegans 76_235 Roundworm 38 38
No Yes Caenorhabditis briggsae 2   19 18
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   4 4
No Yes Echinococcus multilocularis   5 5
No Yes Echinococcus granulosus   5 5
No Yes Taenia solium Pork tapeworm 4 4
No Yes Schistosoma mansoni   9 9
No Yes Mnemiopsis leidyi Sea walnut 6 6
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   44 42
No Yes Nematostella vectensis 1.0 Starlet sea anemone 25 25
No Yes Hydra vulgaris   7 7
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Naegleria gruberi   3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 98 76
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 24 24
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 11 11
No Yes Ascaris suum Victoria/Ghent Pig roundworm 13 13
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 25 25
No Yes Homo sapiens 75_37 (old version GRC) Human 182 161
No Yes Homo sapiens (NCBI version) Human 80 69
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 62 56
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 12 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 8 8
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 6 6
No Yes Homo sapiens 69_37 Human 65 60
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 39 36
No Yes Gorilla gorilla 69_3.1 Western gorilla 41 37
No Yes Pongo abelii 69_2 Sumatran orangutan 41 36
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 40 34
No Yes Macaca mulatta 69_1 Rhesus monkey 41 35
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 46 39
No Yes Otolemur garnettii 69_3 Small-eared galago 45 39
No Yes Microcebus murinus 69_1 Gray mouse lemur 34 29
No Yes Rattus norvegicus 69_3.4 Norway rat 52 50
No Yes Mus musculus 69_38 House mouse 64 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 28 25
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 37 33
No Yes Cavia porcellus 69_3 Domestic guinea pig 41 38
No Yes Oryctolagus cuniculus 69_2 Rabbit 35 31
No Yes Ochotona princeps 69 American pika 30 27
No Yes Tupaia belangeri 69 Northern tree shrew 24 23
No Yes Sus scrofa 69_10.2 Pig 30 25
No Yes Bos taurus 69_3.1 Cattle 41 37
No Yes Vicugna pacos 69_1 Alpaca 19 17
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 34 30
No Yes Mustela putorius furo 69_1.0 Domestic ferret 39 34
No Yes Ailuropoda melanoleuca 69_1 Giant panda 47 41
No Yes Canis familiaris 69_3.1 Dog 46 42
No Yes Felis catus 69 Domestic cat 31 28
No Yes Equus caballus 69_2 Horse 40 34
No Yes Myotis lucifugus 69_2.0 Little brown bat 38 33
No Yes Pteropus vampyrus 69_1 Large flying fox 30 28
No Yes Sorex araneus 69_1 European shrew 20 18
No Yes Erinaceus europaeus 69 Western European hedgehog 24 24
No Yes Procavia capensis 69_1 Cape rock hyrax 31 28
No Yes Loxodonta africana 69_3 African savanna elephant 39 36
No Yes Echinops telfairi 69 Small Madagascar hedgehog 21 18
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 18
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 14
No Yes Macropus eugenii 69_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 37 33
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 34 29
No Yes Ornithorhynchus anatinus 69_5 Platypus 21 21
No Yes Petromyzon marinus 69_7.0 Sea lamprey 14 14
No Yes Meleagris gallopavo 69_2 Turkey 27 26
No Yes Gallus gallus 69_2 Chicken 23 22
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 27 26
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 37 31
No Yes Anolis carolinensis 69_2.0 Green anole 46 38
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 59 42
No Yes Latimeria chalumnae 69_1 Coelacanth 18 17
No Yes Gadus morhua 69_1 Atlantic cod 25 25
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 36 36
No Yes Takifugu rubripes 69_4 Torafugu 30 29
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 29 29
No Yes Oryzias latipes 69_1 Japanese medaka 34 32
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 30 28
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 53 46
No Yes Danio rerio 69_9 Zebrafish 50 39
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 23 23
No Yes Ciona intestinalis 69 Vase tunicate 33 33
No Yes Drosophila melanogaster 69_5 Fruit fly 12 12
No Yes Caenorhabditis elegans 69_215 Roundworm 25 25
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes NCBI 2017_08 genome   18110 16302
No Yes STRING v9.0.5 (STRING)   1305 1214
No Yes Uniprot 2018_03 genome   12772 11554
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   76 68
No Yes Protein Data Bank (all PDB sequenc)   363 321
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   924 924
No Yes TargetDB (Targets)   64 52
No Yes UniProt viral sequences (Viral)   2 2

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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