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Chicken cartilage matrix protein superfamily domain assignments
in
STRING v9.0.5

Assignment details

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STRING v9.0.5 (STRING) has 71 significant domains in 71 proteins.

     

Sequence ID   Evalue   Region   Family  
10090.ENSMUSP00000020899   0.0000102   438-475   Chicken cartilage matrix protein  
10090.ENSMUSP00000022947   0.0000000196   893-934   Chicken cartilage matrix protein  
10090.ENSMUSP00000051009   0.00000000051   580-620   Chicken cartilage matrix protein  
10090.ENSMUSP00000099636   4.97e-17   457-500   Chicken cartilage matrix protein  
10116.ENSRNOP00000008361   0.0000000876   864-905   Chicken cartilage matrix protein  
10116.ENSRNOP00000014666   6.02e-17   455-498   Chicken cartilage matrix protein  
10116.ENSRNOP00000018844   0.00000000051   580-620   Chicken cartilage matrix protein  
10141.ENSCPOP00000002772   0.0000131   864-907   Chicken cartilage matrix protein  
10141.ENSCPOP00000004271   0.0000034   369-409   Chicken cartilage matrix protein  
10141.ENSCPOP00000009111   2.35e-17   453-496   Chicken cartilage matrix protein  
10141.ENSCPOP00000013953   0.00000000432   539-579   Chicken cartilage matrix protein  
13616.ENSMODP00000029292   0.00000000824   556-581   Chicken cartilage matrix protein  
28377.ENSACAP00000000907   0.00000000981   416-443   Chicken cartilage matrix protein  
31033.ENSTRUP00000001167   0.00000000000105   728-769   Chicken cartilage matrix protein  
31033.ENSTRUP00000026987   0.0000785   785-828   Chicken cartilage matrix protein  
31033.ENSTRUP00000032874   0.0000000000000209   615-658   Chicken cartilage matrix protein  
31033.ENSTRUP00000046457   0.000034   356-383   Chicken cartilage matrix protein  
59729.ENSTGUP00000000816   0.00000000445   440-466   Chicken cartilage matrix protein  
59729.ENSTGUP00000005188   0.00000353   551-598   Chicken cartilage matrix protein  
59729.ENSTGUP00000012362   0.0000549   863-905   Chicken cartilage matrix protein  
69293.ENSGACP00000000030   0.000000000405   761-804   Chicken cartilage matrix protein  
69293.ENSGACP00000007577   0.00000000000000275   473-516   Chicken cartilage matrix protein  
69293.ENSGACP00000012812   0.0000000209   302-342   Chicken cartilage matrix protein  
7955.ENSDARP00000049044   7.32e-16   464-507   Chicken cartilage matrix protein  
7955.ENSDARP00000065681   4.71e-16   779-820   Chicken cartilage matrix protein  
7955.ENSDARP00000091381   0.0000000157   428-468   Chicken cartilage matrix protein  
7955.ENSDARP00000099817   0.0000000157   428-468   Chicken cartilage matrix protein  
8090.ENSORLP00000003608   0.0000484   857-900   Chicken cartilage matrix protein  
8090.ENSORLP00000014001   0.0000000484   525-551   Chicken cartilage matrix protein  
8090.ENSORLP00000015701   0.00000157   423-463   Chicken cartilage matrix protein  
8364.ENSXETP00000013062   0.000000000000131   446-491   Chicken cartilage matrix protein  
8364.ENSXETP00000056243   0.000017   359-383   Chicken cartilage matrix protein  
9031.ENSGALP00000000760   0.00000000000000445   461-507   Chicken cartilage matrix protein  
9031.ENSGALP00000006403   0.00000000119   577-617   Chicken cartilage matrix protein  
9031.ENSGALP00000023393   0.00000209   870-913   Chicken cartilage matrix protein  
9361.ENSDNOP00000010694   0.0000209   912-955   Chicken cartilage matrix protein  
9361.ENSDNOP00000011278   0.0000196   408-446   Chicken cartilage matrix protein  
9361.ENSDNOP00000011590   0.00000000128   363-403   Chicken cartilage matrix protein  
9544.ENSMMUP00000002108   0.00000693   441-479   Chicken cartilage matrix protein  
9544.ENSMMUP00000008450   1.57e-16   452-494   Chicken cartilage matrix protein  
9544.ENSMMUP00000026407   0.0000196   867-910   Chicken cartilage matrix protein  
9598.ENSPTRP00000020087   0.00000589   442-480   Chicken cartilage matrix protein  
9598.ENSPTRP00000023256   0.00000000863   578-618   Chicken cartilage matrix protein  
9598.ENSPTRP00000034969   0.0000209   912-955   Chicken cartilage matrix protein  
9600.ENSPPYP00000001876   3.92e-17   417-459   Chicken cartilage matrix protein  
9600.ENSPPYP00000012347   0.00000000863   578-618   Chicken cartilage matrix protein  
9600.ENSPPYP00000014093   0.00000366   448-486   Chicken cartilage matrix protein  
9600.ENSPPYP00000021056   0.0000209   911-954   Chicken cartilage matrix protein  
9606.ENSP00000254898   0.00000732   912-954   Chicken cartilage matrix protein  
9606.ENSP00000343164   0.00000000785   537-577   Chicken cartilage matrix protein  
9606.ENSP00000362870   4.32e-17   453-495   Chicken cartilage matrix protein  
9606.ENSP00000383894   0.0000114   442-479   Chicken cartilage matrix protein  
9615.ENSCAFP00000014207   0.00000275   581-622   Chicken cartilage matrix protein  
9615.ENSCAFP00000016606   0.00000017   538-563   Chicken cartilage matrix protein  
9615.ENSCAFP00000020407   0.0000196   865-908   Chicken cartilage matrix protein  
9796.ENSECAP00000002858   0.0000000549   865-906   Chicken cartilage matrix protein  
9796.ENSECAP00000006851   0.0000000000123   451-493   Chicken cartilage matrix protein  
9796.ENSECAP00000014693   0.0000301   370-407   Chicken cartilage matrix protein  
9796.ENSECAP00000015123   0.0000222   542-583   Chicken cartilage matrix protein  
9823.ENSSSCP00000006494   0.00000811   631-673   Chicken cartilage matrix protein  
9823.ENSSSCP00000007874   0.0000000034   580-620   Chicken cartilage matrix protein  
9823.ENSSSCP00000009174   0.00000209   442-480   Chicken cartilage matrix protein  
9913.ENSBTAP00000014986   0.000000000392   580-620   Chicken cartilage matrix protein  
9913.ENSBTAP00000022815   0.00000523   914-956   Chicken cartilage matrix protein  
9913.ENSBTAP00000040771   0.0000000000000017   454-498   Chicken cartilage matrix protein  
9986.ENSOCUP00000014938   0.0000116   912-954   Chicken cartilage matrix protein  
9986.ENSOCUP00000020595   0.0000000000000222   459-502   Chicken cartilage matrix protein  
99883.ENSTNIP00000002893   0.000000562   713-758   Chicken cartilage matrix protein  
99883.ENSTNIP00000005690   0.000000484   407-451   Chicken cartilage matrix protein  
99883.ENSTNIP00000016285   0.000000288   547-587   Chicken cartilage matrix protein  
99883.ENSTNIP00000020108   0.0000000111   974-1001   Chicken cartilage matrix protein  
 
Weak hits:
10116.ENSRNOP00000059524   0.000745   438-475   Chicken cartilage matrix protein  
13616.ENSMODP00000029056   0.00107   579-604   Chicken cartilage matrix protein  
15368.BRADI1G03890.3   0.00144   42-74   Chicken cartilage matrix protein  
167555.NATL1_20521   0.0915   3-27   Chicken cartilage matrix protein  
209261.t1389   0.0123   20-56   Chicken cartilage matrix protein  
220341.STY1599   0.0123   20-56   Chicken cartilage matrix protein  
251221.gsl0405   0.0471   68-92   Chicken cartilage matrix protein  
264732.Moth_0219   0.000392   37-76   Chicken cartilage matrix protein  
28377.ENSACAP00000012102   0.000405   551-574   Chicken cartilage matrix protein  
2850.JGI32645   0.0772   204-234   Chicken cartilage matrix protein  
290397.Adeh_1296   0.00863   72-100   Chicken cartilage matrix protein  
29760.GSVIVG00004137001   0.0103   333-365   Chicken cartilage matrix protein  
29760.GSVIVG00004191001   0.000745   40-72   Chicken cartilage matrix protein  
29760.GSVIVG00009533001   0.00405   90-128   Chicken cartilage matrix protein  
3055.JGI93846   0.0235   56-78   Chicken cartilage matrix protein  
31033.ENSTRUP00000017188   0.00719   353-381   Chicken cartilage matrix protein  
318161.Sden_1516   0.0102   84-107   Chicken cartilage matrix protein  
3218.JGI206792   0.00863   39-71   Chicken cartilage matrix protein  
323261.Noc_2166   0.0523   76-105   Chicken cartilage matrix protein  
329726.AM1_5130   0.0837   87-110   Chicken cartilage matrix protein  
3694.estExt_Genewise1_v1.C_LG_IX4179   0.0745   251-274   Chicken cartilage matrix protein  
3694.gw1.XIV.452.1   0.00994   37-69   Chicken cartilage matrix protein  
3702.AT2G22640.1-P   0.000981   40-73   Chicken cartilage matrix protein  
3702.AT4G17700.1-P   0.00968   90-108   Chicken cartilage matrix protein  
39947.LOC_Os02g58320.1   0.00288   43-74   Chicken cartilage matrix protein  
405416.ACICU_02749   0.0314   49-76   Chicken cartilage matrix protein  
447217.AnaeK_2564   0.00837   72-100   Chicken cartilage matrix protein  
455488.A2cp1_2660   0.00719   72-100   Chicken cartilage matrix protein  
4558.Sb03g016946.1   0.0497   62-83   Chicken cartilage matrix protein  
4558.Sb04g006335.1   0.00129   20-56   Chicken cartilage matrix protein  
4558.Sb04g038300.1   0.00131   41-73   Chicken cartilage matrix protein  
51511.ENSCSAVP00000020072   0.00131   142-176   Chicken cartilage matrix protein  
5671.LinJ31.3610   0.0497   407-447   Chicken cartilage matrix protein  
5722.A2DCA7   0.0144   37-68   Chicken cartilage matrix protein  
5722.A2ERD2   0.0144   37-68   Chicken cartilage matrix protein  
59689.fgenesh1_pg.C_scaffold_4000159   0.034   40-73   Chicken cartilage matrix protein  
59729.ENSTGUP00000013537   0.0458   361-387   Chicken cartilage matrix protein  
6239.ZK596.1   0.00327   85-117   Chicken cartilage matrix protein  
69293.ENSGACP00000017142   0.000589   359-395   Chicken cartilage matrix protein  
7244.FBpp0231651   0.0222   12-37   Chicken cartilage matrix protein  
7245.FBpp0258900   0.0562   1256-1290   Chicken cartilage matrix protein  
7955.ENSDARP00000091428   0.00549   435-461   Chicken cartilage matrix protein  
8364.ENSXETP00000049389   0.000471   418-444   Chicken cartilage matrix protein  
9031.ENSGALP00000026536   0.0102   408-435   Chicken cartilage matrix protein  
9361.ENSDNOP00000007193   0.085   111-143   Chicken cartilage matrix protein  
9544.ENSMMUP00000028625   0.0706   153-184   Chicken cartilage matrix protein  
9615.ENSCAFP00000005694   0.00196   369-395   Chicken cartilage matrix protein  
9615.ENSCAFP00000030573   0.0785   42-71   Chicken cartilage matrix protein  
9685.ENSFCAP00000002001   0.000667   887-929   Chicken cartilage matrix protein  
9913.ENSBTAP00000027836   0.000275   445-471   Chicken cartilage matrix protein  
9986.ENSOCUP00000024838   0.000103   369-407   Chicken cartilage matrix protein  
99883.ENSTNIP00000021957   0.000798   355-383   Chicken cartilage matrix protein  

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View all assignments containing a Chicken cartilage matrix protein domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   3034 3034
No Yes Homo sapiens 76_38 Human 14 14
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 3 3
No Yes Gorilla gorilla 76_3.1 Western gorilla 5 5
No Yes Pongo abelii 76_2 Sumatran orangutan 4 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 4 4
No Yes Papio anubis 76 Olive baboon 4 4
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 10 10
No Yes Otolemur garnettii 76_3 Small-eared galago 4 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 76_5.0 Norway rat 3 3
No Yes Mus musculus 76_38 House mouse 8 8
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 3 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 2 2
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 3 3
No Yes Vicugna pacos 76_1 Alpaca 3 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 3 3
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 4 4
No Yes Myotis lucifugus 76_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 76_1 Large flying fox 4 4
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 5 5
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 4 4
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 3 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 3 3
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 4 4
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 5 5
No Yes Gadus morhua 76_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 8 8
No Yes Takifugu rubripes 76_4 Torafugu 17 17
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 76_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 4 4
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 5 5
No Yes Astyanax mexicanus 76 Mexican tetra 4 4
No Yes Danio rerio 76_9 Zebrafish 16 16
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 16 16
No Yes Homo sapiens (NCBI version) Human 7 7
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 4 4
No Yes Homo sapiens 69_37 Human 4 4
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 3 3
No Yes Gorilla gorilla 69_3.1 Western gorilla 4 4
No Yes Pongo abelii 69_2 Sumatran orangutan 4 4
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 4 4
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 4 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 69_3.4 Norway rat 3 3
No Yes Mus musculus 69_38 House mouse 4 4
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 3 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 2 2
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 3 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Equus caballus 69_2 Horse 4 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 69_1 Large flying fox 4 4
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 4 4
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 4 4
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 3 3
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 69_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 4 4
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes NCBI 2017_08 genome   1703 1703
No Yes STRING v9.0.5 (STRING)   71 71
No Yes Uniprot 2018_03 genome   603 603
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   2 2

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