Select to display Genome Domains Proteins No ALL 162870 162870 No Homo sapiens 76_38 Human 111 106 No Pan troglodytes 76_2.1.4 Chimpanzee 29 27 No Gorilla gorilla 76_3.1 Western gorilla 50 48 No Pongo abelii 76_2 Sumatran orangutan 23 21 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 28 27 No Papio anubis 76 Olive baboon 31 30 No Macaca mulatta 76_1 Rhesus monkey 61 59 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 70 65 No Otolemur garnettii 76_3 Small-eared galago 37 36 No Microcebus murinus 76_1 Gray mouse lemur 19 17 No Rattus norvegicus 76_5.0 Norway rat 45 44 No Mus musculus 76_38 House mouse 97 91 No Dipodomys ordii 76_1 Ord's kangaroo rat 26 24 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 37 34 No Heterocephalus glaber v1.7-2 Naked mole-rat 46 43 No Cavia porcellus 76_3 Domestic guinea pig 23 21 No Oryctolagus cuniculus 76_2 Rabbit 33 32 No Ochotona princeps 76 American pika 18 17 No Tupaia belangeri 76 Northern tree shrew 23 20 No Sus scrofa 76_10.2 Pig 37 36 No Bos taurus 76_3.1 Cattle 36 35 No Ovis aries 76_3.1 Sheep 30 29 No Vicugna pacos 76_1 Alpaca 19 18 No Tursiops truncatus 76_1 Bottlenose dolphin 18 17 No Mustela putorius furo 76_1.0 Domestic ferret 25 24 No Ailuropoda melanoleuca 76_1 Giant panda 35 33 No Canis familiaris 76_3.1 Dog 39 37 No Felis catus 76_6.2 Domestic cat 31 30 Yes Equus caballus 76_2 Horse 49 47 No Myotis lucifugus 76_2.0 Little brown bat 25 22 No Pteropus vampyrus 76_1 Large flying fox 20 18 No Sorex araneus 76_1 European shrew 14 14 No Erinaceus europaeus 76 Western European hedgehog 15 14 No Procavia capensis 76_1 Cape rock hyrax 12 11 No Loxodonta africana 76_3 African savanna elephant 45 41 No Echinops telfairi 76 Small Madagascar hedgehog 24 23 No Dasypus novemcinctus 76_2 Nine-banded armadillo 54 45 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 12 10 No Macropus eugenii 76_1.0 Tammar wallaby 23 21 No Sarcophilus harrisii 76_7.0 Tasmanian devil 33 29 No Monodelphis domestica 76_5 Gray short-tailed opossum 58 55 No Ornithorhynchus anatinus 76_5 Platypus 42 39 No Saccoglossus kowalevskii v3.0 157 124 No Petromyzon marinus 76_7.0 Sea lamprey 18 18 No Meleagris gallopavo 76_2 Turkey 51 47 No Gallus gallus 76_4 Chicken 29 28 No Anas platyrhynchos 76_1.0 Mallard 24 22 No Taeniopygia guttata 76_3.2.4 Zebra finch 25 25 No Ficedula albicollis 76_1.0 Collared flycatcher 30 29 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 33 32 No Anolis carolinensis 76_2.0 Green anole 37 36 No Xenopus laevis African clawed frog 72 70 No Xenopus tropicalis 76_4.2 Tropical clawed frog 53 50 No Latimeria chalumnae 76_1 Coelacanth 115 107 No Lepisosteus oculatus 76 Spotted gar 72 65 No Gadus morhua 76_1 Atlantic cod 36 34 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 63 61 No Takifugu rubripes 76_4 Torafugu 101 96 No Gasterosteus aculeatus 76_1 Three-spined stickleback 53 50 No Oryzias latipes 76_1 Japanese medaka 54 53 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 46 46 No Poecilia formosa 76 Amazon molly 51 46 No Oreochromis niloticus 76_1.0 Nile tilapia 81 69 No Astyanax mexicanus 76 Mexican tetra 44 40 No Danio rerio 76_9 Zebrafish 102 98 No Oikopleura dioica 26 25 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 49 44 No Ciona intestinalis 76 Vase tunicate 25 23 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 52 50 No Adineta vaga 51 47 No Octopus bimaculoides 280 84 64 No Crassostrea gigas 22 Pacific oyster 37 31 No Lottia gigantea Owl limpet 26 25 No Helobdella robusta 17 17 No Capitella sp. I 18 16 No Danaus plexippus OGS1.0 Monarch butterfly 17 15 No Heliconius melpomene Postman butterfly 15 15 No Bombyx mori Domestic silkworm 19 18 No Nasonia vitripennis Jewel wasp 15 11 No Apis mellifera 38.2d (Not maintained) Honey bee 56 46 No Harpegnathos saltator v3.3 Jerdon's jumping ant 21 18 No Linepithema humile v1.1 Argentine ant 14 11 No Pogonomyrmex barbatus v1.2 Red harvester ant 20 17 No Solenopsis invicta v.2.2.3 Red fire ant 18 14 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 21 14 No Atta cephalotes v1.1 21 18 No Camponotus floridanus v3.3 Florida carpenter ant 24 19 No Lucilia cuprina Australian sheep blowfly 18 13 No Drosophila grimshawi 1.3 12 11 No Drosophila willistoni 1.3 13 12 No Drosophila pseudoobscura 2.13 15 12 No Drosophila persimilis 1.3 15 14 No Drosophila suzukii 22 19 No Drosophila yakuba 1.3 15 13 No Drosophila simulans 1.3 10 8 No Drosophila sechellia 1.3 14 12 No Drosophila melanogaster 76_5 Fruit fly 44 43 No Drosophila erecta 1.3 13 11 No Drosophila ananassae 1.3 15 13 No Drosophila virilis 1.2 18 14 No Drosophila mojavensis 1.3 15 13 No Megaselia scalaris 22 8 7 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 30 29 No Culex pipiens quinquefasciatus Southern house mosquito 32 28 No Anopheles darlingi 22 American malaria mosquito 11 11 No Anopheles gambiae 49_3j African malaria mosquito 18 16 No Tribolium castaneum 3.0 Red flour beetle 21 18 No Pediculus humanus corporis Human body louse 11 10 No Acyrthosiphon pisum Pea aphid 13 13 No Rhodnius prolixus 22 15 14 No Daphnia pulex Common water flea 14 13 No Strigamia maritima 22 17 14 No Sarcoptes scabiei 9 9 No Tetranychus urticae Two-spotted spider mite 17 16 No Ixodes scapularis Black-legged tick 10 10 No Pristionchus pacificus 11 9 No Meloidogyne incognita Southern root-knot nematode 13 13 No Meloidogyne hapla 4 4 No Onchocerca volvulus 22 18 13 No Brugia malayi WS250 Agent of lymphatic filariasis 22 19 No Caenorhabditis japonica 11 9 No Caenorhabditis brenneri 18 15 No Caenorhabditis remanei 21 17 No Caenorhabditis elegans 76_235 Roundworm 40 34 No Caenorhabditis briggsae 2 29 24 No Trichinella spiralis 22 8 8 No Hymenolepis microstoma 23 19 No Echinococcus multilocularis 15 15 No Echinococcus granulosus 15 15 No Taenia solium Pork tapeworm 15 15 No Schistosoma mansoni 41 39 No Mnemiopsis leidyi Sea walnut 39 35 No Thelohanellus kitauei 8 8 No Acropora digitifera v1.0 56 44 No Nematostella vectensis 1.0 Starlet sea anemone 52 50 No Hydra vulgaris 29 22 No Amphimedon queenslandica 17 17 No Trichoplax adhaerens 9 9 No Proterospongia sp. ATCC 50818 26 23 No Monosiga brevicollis 17 17 No Sphaeroforma arctica JP610 22 17 No Capsaspora owczarzaki ATCC 30864 6 6 No Conidiobolus coronatus NRRL28638 v1.0 5 5 No Mortierella verticillata NRRL 6337 13 13 No Phycomyces blakesleeanus 10 10 No Rhizopus oryzae RA 99-880 13 12 No Mucor circinelloides 7 7 No Rhizomucor miehei CAU432 9 8 No Malassezia globosa CBS 7966 6 6 No Sporisorium reilianum 22 6 4 No Ustilago maydis 7 6 No Mixia osmundae IAM 14324 v1.0 4 4 No Cronartium quercuum f. sp. fusiforme G11 v1.0 3 3 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 6 6 No Melampsora laricis-populina 4 4 No Rhodotorula graminis WP1 v1.0 7 6 No Sporobolomyces roseus IAM 13481 5 4 No Microbotryum violaceum 22 7 6 No Wallemia sebi v1.0 3 3 No Sphaerobolus stellatus v1.0 9 9 No Piloderma croceum F 1598 v1.0 11 11 No Serpula lacrymans var. lacrymans S7.9 3 3 No Coniophora puteana 10 9 No Hydnomerulius pinastri v2.0 6 6 No Paxillus rubicundulus Ve08.2h10 v1.0 6 6 No Pisolithus microcarpus 441 v1.0 6 5 No Pisolithus tinctorius Marx 270 v1.0 6 6 No Scleroderma citrinum Foug A v1.0 10 10 No Coprinopsis cinerea okayama7 130 v3 18 18 No Pleurotus ostreatus Oyster mushroom 3 3 No Amanita thiersii Skay4041 v1.0 6 6 No Amanita muscaria Koide v1.0 Fly agaric 6 6 No Galerina marginata v1.0 9 9 No Hebeloma cylindrosporum h7 v2.0 9 9 No Laccaria bicolor S238N-H82 7 7 No Agaricus bisporus var. bisporus 7 6 No Schizophyllum commune 26 23 No Stereum hirsutum FP-91666 SS1 v1.0 5 5 No Heterobasidion annosum 10 9 No Gloeophyllum trabeum v1.0 12 10 No Punctularia strigosozonata v1.0 12 11 No Sebacina vermifera MAFF 305830 v1.0 10 8 No Fomitiporia mediterranea v1.0 4 4 No Tulasnella calospora AL13/4D v1.0 10 8 No Postia placenta 10 8 No Wolfiporia cocos MD-104 SS10 v1.0 6 6 No Fomitopsis pinicola v1.0 15 14 No Fomitopsis pinicola FP-58527 SS1 v3.0 16 15 No Phanerochaete chrysosporium RP-78 2.1 10 10 No Dichomitus squalens 3 3 No Trametes versicolor v1.0 7 7 No Tremella mesenterica Witches' butter 6 6 No Daldinia eschscholzii EC12 v1.0 7 7 No Apiospora montagnei NRRL 25634 v1.0 8 8 No Magnaporthe poae ATCC 64411 22 10 10 No Magnaporthe grisea 70-15 11 10 No Podospora anserina 10 10 No Sporotrichum thermophile ATCC 42464 6 6 No Thielavia terrestris NRRL 8126 7 7 No Chaetomium globosum CBS 148.51 4 4 No Neurospora tetrasperma 6 6 No Neurospora discreta FGSC 8579 6 6 No Neurospora crassa OR74A 11 10 No Cryphonectria parasitica Chestnut blight fungus 8 8 No Verticillium albo-atrum VaMs.102 5 5 No Verticillium dahliae VdLs.17 6 6 No Acremonium alcalophilum v 1.0 7 6 No Glomerella graminicola 22 7 7 No Fusarium graminearum 10 8 No Nectria haematococca mpVI 7 6 No Fusarium oxysporum f. sp. lycopersici 4286 9 9 No Fusarium verticillioides 7600 10 10 No Trichoderma asperellum CBS 433.97 v1.0 3 3 No Trichoderma atroviride 2 2 No Trichoderma citrinoviride v1.0 4 4 No Trichoderma reesei 1.2 6 6 No Trichoderma virens Gv29-8 4 4 No Trichoderma longibrachiatum ATCC 18648 v1.0 2 2 No Trichoderma harzianum CBS 226.95 v1.0 5 5 No Amorphotheca resinae v1.0 Creosote fungus 6 6 No Botrytis cinerea B05.10 6 6 No Sclerotinia sclerotiorum 6 6 No Blumeria graminis 22 6 6 No Didymella exigua CBS 183.55 v1.0 6 6 No Leptosphaeria maculans 22 9 8 No Setosphaeria turcica v1.0 7 7 No Cochliobolus miyabeanus ATCC 44560 v1.0 5 5 No Cochliobolus victoriae FI3 v1.0 8 5 No Cochliobolus carbonum 26-R-13 v1.0 8 7 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 5 4 No Alternaria brassicicola 12 9 No Cochliobolus lunatus m118 v2.0 5 5 No Pyrenophora teres f. teres 22 7 5 No Pyrenophora tritici-repentis 9 7 No Stagonospora nodorum 12 10 No Mycosphaerella graminicola IPO323 7 7 No Zasmidium cellare ATCC 36951 v1.0 13 12 No Dothistroma septosporum 5 5 No Septoria musiva v1.0 5 5 No Mycosphaerella fijiensis CIRAD86 4 4 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 10 10 No Paracoccidioides brasiliensis Pb18 6 6 No Coccidioides posadasii RMSCC 3488 2 2 No Coccidioides immitis RS 4 4 No Ajellomyces dermatitidis SLH14081 3 3 No Histoplasma capsulatum class NAmI strain WU24 6 6 No Microsporum canis CBS 113480 5 5 No Trichophyton equinum CBS 127.97 8 8 No Trichophyton verrucosum HKI 0517 8 8 No Arthroderma benhamiae CBS 112371 11 11 No Trichophyton tonsurans CBS 112818 9 9 No Trichophyton rubrum CBS 118892 6 6 No Uncinocarpus reesii 1704 6 6 No Aspergillus zonatus v1.0 3 3 No Penicillium chrysogenum Wisconsin 54-1255 4 4 No Penicillium chrysogenum v1.0 2 2 No Aspergillus acidus v1.0 8 7 No Aspergillus fumigatus Af293 8 7 No Aspergillus brasiliensis v1.0 3 3 No Aspergillus nidulans FGSC A4 6 6 No Aspergillus sydowii v1.0 9 8 No Aspergillus versicolor v1.0 12 12 No Aspergillus glaucus 3 3 No Aspergillus carbonarius ITEM 5010 5 5 No Neosartorya fischeri NRRL 181 8 8 No Aspergillus terreus NIH2624 12 12 No Aspergillus tubingensis v1.0 7 6 No Aspergillus wentii v1.0 8 8 No Aspergillus oryzae RIB40 6 6 No Aspergillus niger 22 9 8 No Aspergillus niger ATCC 1015 6 6 No Aspergillus flavus NRRL3357 6 6 No Aspergillus clavatus NRRL 1 5 5 No Penicillium marneffei ATCC 18224 6 5 No Tuber melanosporum Mel28 22 5 4 No Tuber melanosporum Vittad Perigord truffle 7 6 No Hansenula polymorpha v2.0 2 2 No Dekkera bruxellensis CBS 2499 v2.0 1 1 No Pichia membranifaciens v1.0 1 1 No Candida tanzawaensis NRRL Y-17324 v1.0 3 3 No Candida dubliniensis CD36 6 5 No Candida tropicalis MYA-3404 5 3 No Candida parapsilosis 3 3 No Candida albicans SC5314 5 5 No Lodderomyces elongisporus NRRL YB-4239 4 4 No Babjeviella inositovora NRRL Y-12698 v1.0 2 2 No Pichia stipitis CBS 6054 2 2 No Candida guilliermondii ATCC 6260 3 3 No Hyphopichia burtonii NRRL Y-1933 v1.0 3 3 No Debaromyces hansenii 5 4 No Wickerhamomyces anomalus 2 2 No Pichia pastoris GS115 4 4 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 3 3 No Yarrowia lipolytica CLIB122 7 6 No Candida lusitaniae ATCC 42720 5 5 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 1 1 No Vanderwaltozyma polyspora DSM 70294 8 4 No Candida glabrata CBS138 7 5 No Kluyveromyces thermotolerans CBS 6340 8 7 No Lachancea kluyveri 3 3 No Kluyveromyces waltii 4 4 No Ashbya gossypii ATCC 10895 3 3 No Zygosaccharomyces rouxii 7 7 No Saccharomyces mikatae MIT 6 5 No Saccharomyces paradoxus MIT 6 6 No Saccharomyces cerevisiae 76 Baker's yeast 6 5 No Saccharomyces bayanus MIT 8 7 No Kluyveromyces lactis 4 4 No Schizosaccharomyces cryophilus OY26 22 5 3 No Schizosaccharomyces octosporus yFS286 11 10 No Schizosaccharomyces japonicus yFS275 6 5 No Schizosaccharomyces pombe Fission yeast 11 10 No Catenaria anguillulae PL171 v1.0 20 18 No Allomyces macrogynus ATCC 38327 16 15 No Spizellomyces punctatus DAOM BR117 19 18 No Dictyostelium discoideum 4 4 No Dictyostelium purpureum 4 4 No Entamoeba dispar 1.2 4 3 No Entamoeba invadens 1.2 23 18 No Entamoeba histolytica 1 6 4 No Selaginella moellendorffii 15 13 No Pinus taeda Loblolly pine 4 3 No Picea abies Norway spruce 6 4 No Eucalyptus grandis v201 Rose gum 43 40 No Theobroma cacao B97-61/B2 v1 Cacao 17 15 No Gossypium raimondii v221 127 107 No Citrus clementina v165 34 31 No Citrus sinensis v154 Sweet orange 70 56 No Thellungiella halophila v173 33 28 No Brassica rapa Chiifu-401 1.2 Field mustard 39 34 No Capsella rubella v183 37 31 No Arabidopsis lyrata Lyrate rockcress 17 17 No Arabidopsis thaliana 10 Thale cress 36 35 No Carica papaya Papaya 12 11 No Medicago truncatula Barrel medic 91 75 No Phaseolus vulgaris v186 French bean 40 37 No Glycine max v109 Soybean 64 59 No Cucumis sativus v122 Cucumber 24 23 No Fragaria vesca Wild strawberry 26 24 No Malus domestica v196 Apple 36 34 No Prunus persica v139 Peach 22 20 No Linum usitatissimum v200 Flax 42 37 No Manihot esculenta v147 Cassava 25 22 No Populus trichocarpa v156 Black cottonwood 36 29 No Vitis vinifera Wine grape 6 6 No Mimulus guttatus v140 Spotted monkey flower 9 9 No Solanum lycopersicum v.2.3 Tomato 22 18 No Solanum tuberosum Potato 30 28 No Actinidia chinensis Hongyang 21 19 No Aquilegia coerulea v195 55 51 No Triticum urartu 22 19 17 No Triticum aestivum 22 Bread wheat 50 44 No Aegilops tauschii 22 17 14 No Brachypodium distachyon Stiff brome 21 19 No Oryza barthii 22 African wild rice 26 21 No Oryza meridionalis 22 27 25 No Oryza glumaepatula 22 31 23 No Oryza glaberrima African rice 21 17 No Oryza punctata 22 34 29 No Oryza nivara 22 25 21 No Oryza brachyantha 22 Malo sina 24 23 No Oryza sativa ssp. japonica 5.0 Japanese rice 42 39 No Oryza sativa v193 Rice 39 36 No Phyllostachys heterocycla var. pubescens Kikko-chiku 11 11 No Panicum virgatum v202 Switchgrass 34 26 No Setaria italica v164 Foxtail millet 21 18 No Zea mays subsp. mays Maize 23 23 No Zea mays v181 Maize 28 27 No Sorghum bicolor Sorghum 16 15 No Musa balbisiana Balbis banana 25 23 No Musa acuminata 22 Wild Malaysian banana 18 15 No Amborella trichopoda 22 11 9 No Physcomitrella patens 13 11 No Coccomyxa subellipsoidea sp. C-169 v2 14 13 No Asterochloris sp. Cgr/DA1pho v1.0 10 9 No Chlorella variabilis sp. NC64A 15 11 No Chlorella vulgaris 13 12 No Volvox carteri f. nagariensis 28 25 No Volvox carteri v199 28 25 No Chlamydomonas reinhardtii 4.0 23 18 No Ostreococcus sp. RCC809 5 4 No Ostreococcus lucimarinus CCE9901 12 9 No Ostreococcus tauri 8 8 No Bathycoccus prasinos 3 3 No Micromonas sp. RCC299 8 8 No Micromonas pusilla CCMP1545 v3.0 4 4 No Cyanidioschyzon merolae strain 10D 22 3 3 No Cyanidioschyzon merolae 3 3 No Porphyridium purpureum 02_2012 4 4 No Thecamonas trahens ATCC 50062 51 44 No Bigelowiella natans CCMP2755 22 6 6 No Giardia lamblia 2.3 13 13 No Cyanophora paradoxa 17 17 No Leishmania mexicana 2.4 16 11 No Leishmania major strain Friedlin 13 9 No Leishmania infantum JPCM5 2.4 12 5 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 19 12 No Trypanosoma vivax 14 11 No Trypanosoma cruzi strain CL Brener 4 4 No Trypanosoma congolense 2.4 7 7 No Trypanosoma brucei gambiense v4.1 10 6 No Trypanosoma brucei TREU927 v4.1 10 7 No Ectocarpus siliculosus 8 8 No Aureococcus anophagefferens 6 6 No Albugo laibachii 22 4 4 No Pythium iwayamai DAOM BR242034 22 3 3 No Pythium arrhenomanes ATCC 12531 22 5 5 No Pythium ultimum v1.7-2 4 4 No Pythium aphanidermatum DAOM BR444 22 10 8 No Pythium irregulare DAOM BR486 22 5 5 No Pythium vexans DAOM BR484 22 5 5 No Phytophthora ramorum 1.1 Sudden oak death agent 9 9 No Phytophthora sojae 1.1 15 15 No Phytophthora infestans T30-4 4 3 No Phytophthora capsici 10 10 No Hyaloperonospora arabidopsidis 22 2 2 No Phaeodactylum tricornutum CCAP 1055/1 1 1 No Fragilariopsis cylindrus 6 6 No Thalassiosira pseudonana CCMP1335 4 4 No Perkinsus marinus ATCC 50983 31 28 No Paramecium tetraurelia 60 49 No Tetrahymena thermophila SB210 1 18 17 No Ichthyophthirius multifiliis strain G5 11 7 No Cryptosporidium hominis 2 2 No Cryptosporidium parvum Iowa II 2 2 No Neospora caninum 2 2 No Toxoplasma gondii VEG 2 2 No Toxoplasma gondii ME49 2 2 No Toxoplasma gondii GT1 2 2 No Babesia bovis T2Bo 12 10 No Theileria parva 7 5 No Theileria annulata 3 3 No Plasmodium falciparum 3D7 9 9 No Plasmodium vivax SaI-1 7.0 2 2 No Plasmodium knowlesi strain H 4 4 No Plasmodium yoelii ssp. yoelii 1 1 1 No Plasmodium chabaudi 1 1 No Plasmodium berghei ANKA 4 3 No Symbiodinium minutum clade B1 v1.2 40 39 No Naegleria gruberi 8 7 No Trichomonas vaginalis 69 58 No Guillardia theta CCMP2712 v1.0 28 27 No Emiliania huxleyi CCMP1516 1 1 No Thermobaculum terrenum ATCC BAA-798 3 2 No Leptolyngbya sp. PCC 7376 1 1 No Pseudanabaena sp. PCC 7367 2 2 No Acaryochloris marina MBIC11017 1 1 No Synechocystis sp. PCC 6803 1 1 No Thermosynechococcus sp. NK55 2 2 No Thermosynechococcus elongatus BP-1 4 4 No Synechococcus sp. PCC 6312 3 3 No Synechococcus elongatus PCC 7942 1 1 No Prochlorococcus marinus str. MIT 9515 1 1 No Microcoleus sp. PCC 7113 3 3 No Trichodesmium erythraeum IMS101 10 7 No Geitlerinema sp. PCC 7407 2 2 No Cyanothece sp. PCC 8802 2 2 No Gloeocapsa sp. PCC 7428 3 3 No Halothece sp. PCC 7418 8 7 No Microcystis aeruginosa NIES-843 6 6 No Gloeobacter violaceus PCC 7421 2 2 No Rivularia sp. PCC 7116 3 3 No Calothrix sp. PCC 7507 5 5 No Anabaena variabilis ATCC 29413 4 3 No 'Nostoc azollae' 0708 2 2 No Nostoc punctiforme PCC 73102 3 3 No Nostoc sp. PCC 7120 4 3 No Nostoc sp. PCC 7524 1 1 No Aster yellows witches'-broom phytoplasma AYWB 3 3 No Ureaplasma parvum serovar 3 str. ATCC 27815 1 1 No Mycoplasma leachii 99/014/6 1 1 No Mycoplasma mycoides subsp. capri LC str. 95010 6 6 No Mycoplasma capricolum subsp. capricolum ATCC 27343 3 3 No Mycoplasma mobile 163K 1 1 No Mycoplasma pneumoniae 309 1 1 No Conexibacter woesei DSM 14684 2 2 No Eggerthella lenta DSM 2243 1 1 No Slackia heliotrinireducens DSM 20476 2 2 No Atopobium parvulum DSM 20469 1 1 No Coriobacterium glomerans PW2 1 1 No Rubrobacter xylanophilus DSM 9941 1 1 No Ilumatobacter coccineus 1 1 No Thermobispora bispora DSM 43833 1 1 No Modestobacter marinus 1 1 No Stackebrandtia nassauensis DSM 44728 1 1 No Frankia symbiont of Datisca glomerata 1 1 No Thermobifida fusca YX 1 1 No Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 1 1 No Thermomonospora curvata DSM 43183 2 2 No Streptosporangium roseum DSM 43021 1 1 No Saccharomonospora viridis DSM 43017 1 1 No Pseudonocardia dioxanivorans CB1190 1 1 No Amycolatopsis mediterranei U32 2 2 No Nocardioides sp. JS614 2 2 No Propionibacterium propionicum F0230a 1 1 No Salinispora arenicola CNS-205 1 1 No Salinispora tropica CNB-440 1 1 No Micromonospora sp. L5 1 1 No Micromonospora aurantiaca ATCC 27029 1 1 No Actinoplanes sp. SE50/110 1 1 No Nocardia farcinica IFM 10152 1 1 No Amycolicicoccus subflavus DQS3-9A1 1 1 No Mycobacterium vanbaalenii PYR-1 1 1 No Mycobacterium gilvum PYR-GCK 1 1 No Mycobacterium chubuense NBB4 1 1 No Corynebacterium resistens DSM 45100 2 2 No Corynebacterium kroppenstedtii DSM 44385 1 1 No Corynebacterium ulcerans 0102 2 2 No Corynebacterium pseudotuberculosis 316 1 1 No Kytococcus sedentarius DSM 20547 1 1 No Beutenbergia cavernae DSM 12333 1 1 No Microbacterium testaceum StLB037 1 1 No Jonesia denitrificans DSM 20603 1 1 No Isoptericola variabilis 225 3 2 No Xylanimonas cellulosilytica DSM 15894 1 1 No Cellulomonas fimi ATCC 484 1 1 No [Cellvibrio] gilvus ATCC 13127 1 1 No Arthrobacter phenanthrenivorans Sphe3 3 2 No Arthrobacter chlorophenolicus A6 1 1 No Arthrobacter aurescens TC1 1 1 No Arthrobacter arilaitensis Re117 1 1 No Arthrobacter sp. Rue61a 1 1 No Arthrobacter sp. FB24 2 2 No Gardnerella vaginalis 409-05 2 2 No Bifidobacterium dentium Bd1 1 1 No Arcanobacterium haemolyticum DSM 20595 1 1 No Mobiluncus curtisii ATCC 43063 1 1 No Caldilinea aerophila DSM 14535 = NBRC 104270 1 1 No Thermomicrobium roseum DSM 5159 3 3 No Herpetosiphon aurantiacus DSM 785 1 1 No Chloroflexus aggregans DSM 9485 3 2 No Deinococcus deserti VCD115 1 1 No Deinococcus maricopensis DSM 21211 1 1 No Deinococcus geothermalis DSM 11300 1 1 No Deinococcus proteolyticus MRP 1 1 No Oceanithermus profundus DSM 14977 1 1 No Marinithermus hydrothermalis DSM 14884 1 1 No Meiothermus silvanus DSM 9946 1 1 No Thermus sp. CCB_US3_UF1 2 2 No Thermus thermophilus HB27 1 1 No Anaerococcus prevotii DSM 20548 1 1 No Finegoldia magna ATCC 29328 1 1 No Veillonella parvula DSM 2008 1 1 No Megasphaera elsdenii DSM 20460 1 1 No Acidaminococcus intestini RyC-MR95 1 1 No Acidaminococcus fermentans DSM 20731 2 2 No Selenomonas sputigena ATCC 35185 1 1 No Erysipelothrix rhusiopathiae str. Fujisawa 2 2 No Natranaerobius thermophilus JW/NM-WN-LF 3 3 No Clostridium clariflavum DSM 19732 4 4 No Clostridium cellulolyticum H10 2 2 No Clostridium thermocellum ATCC 27405 3 3 No Ruminococcus sp. 2 2 No Ruminococcus bromii 2 2 No Ruminococcus albus 7 4 4 No Thermaerobacter marianensis DSM 12885 1 1 No Oscillibacter valericigenes Sjm18-20 1 1 No Thermincola potens JR 5 5 No Pelotomaculum thermopropionicum SI 1 1 No Dehalobacter sp. DCA 1 1 No Dehalobacter sp. CF 1 1 No Syntrophobotulus glycolicus DSM 8271 1 1 No Desulfitobacterium hafniense Y51 4 4 No Desulfotomaculum reducens MI-1 2 2 No Desulfotomaculum acetoxidans DSM 771 2 2 No Desulfotomaculum kuznetsovii DSM 6115 5 5 No Desulfotomaculum carboxydivorans CO-1-SRB 3 3 No Desulfotomaculum ruminis DSM 2154 3 3 No Acetobacterium woodii DSM 1030 2 2 No Eubacterium eligens ATCC 27750 2 2 No Eubacterium limosum KIST612 1 1 No Clostridium difficile 630 4 3 No Clostridium phytofermentans ISDg 10 2 No [Ruminococcus] obeum 3 1 No [Ruminococcus] torques 1 1 No Roseburia hominis A2-183 2 2 No Roseburia intestinalis 2 2 No Butyrivibrio proteoclasticus B316 2 2 No Butyrivibrio fibrisolvens 1 1 No Syntrophothermus lipocalidus DSM 12680 2 2 No Syntrophomonas wolfei subsp. wolfei str. Goettingen 2 2 No Heliobacterium modesticaldum Ice1 4 4 No Alkaliphilus oremlandii OhILAs 1 1 No Alkaliphilus metalliredigens QYMF 2 2 No Clostridium sp. BNL1100 2 2 No Clostridium novyi NT 2 1 No Clostridium kluyveri DSM 555 3 3 No Clostridium beijerinckii NCIMB 8052 1 1 No Clostridium perfringens ATCC 13124 1 1 No Clostridium cellulovorans 743B 2 2 No Clostridium botulinum A str. ATCC 3502 2 2 No Clostridium acetobutylicum ATCC 824 2 2 No Mahella australiensis 50-1 BON 3 3 No Thermosediminibacter oceani DSM 16646 2 2 No Caldicellulosiruptor obsidiansis OB47 4 4 No Caldicellulosiruptor kronotskyensis 2002 5 5 No Caldicellulosiruptor hydrothermalis 108 5 5 No Caldicellulosiruptor owensensis OL 5 5 No Caldicellulosiruptor lactoaceticus 6A 7 7 No Caldicellulosiruptor kristjanssonii 177R1B 7 7 No Caldicellulosiruptor saccharolyticus DSM 8903 8 8 No Caldicellulosiruptor bescii DSM 6725 5 5 No Thermoanaerobacterium xylanolyticum LX-11 3 3 No Thermoanaerobacterium thermosaccharolyticum DSM 571 3 3 No Tepidanaerobacter acetatoxydans Re1 2 2 No Thermoanaerobacter tengcongensis MB4 2 2 No Carboxydothermus hydrogenoformans Z-2901 3 3 No Thermoanaerobacter pseudethanolicus ATCC 33223 3 3 No Thermoanaerobacter sp. X514 2 2 No Thermoanaerobacter italicus Ab9 1 1 No Thermoanaerobacter wiegelii Rt8.B1 2 2 No Thermoanaerobacter brockii subsp. finnii Ako-1 2 2 No Acetohalobium arabaticum DSM 5501 3 2 No Halothermothrix orenii H 168 2 2 No Halanaerobium hydrogeniformans 4 4 No Halanaerobium praevalens DSM 2228 2 2 No Carnobacterium sp. 17-4 1 1 No Aerococcus urinae ACS-120-V-Col10a 1 1 No Tetragenococcus halophilus NBRC 12172 1 1 No Enterococcus hirae ATCC 9790 2 2 No Enterococcus faecium Aus0004 5 5 No Enterococcus faecalis 62 2 2 No Leuconostoc sp. C2 1 1 No Leuconostoc kimchii IMSNU 11154 2 2 No Leuconostoc citreum KM20 1 1 No Leuconostoc gasicomitatum LMG 18811 2 2 No Lactobacillus kefiranofaciens ZW3 2 1 No Lactobacillus crispatus ST1 1 1 No Lactobacillus rhamnosus Lc 705 2 2 No Lactobacillus johnsonii FI9785 3 2 No Lactobacillus sanfranciscensis TMW 1.1304 1 1 No Lactobacillus salivarius CECT 5713 2 2 No Lactobacillus fermentum IFO 3956 2 2 No Lactobacillus reuteri DSM 20016 3 3 No Lactobacillus gasseri ATCC 33323 3 3 No Lactobacillus brevis ATCC 367 1 1 No Lactobacillus acidophilus 30SC 1 1 No Pediococcus pentosaceus ATCC 25745 2 2 No Streptococcus gallolyticus UCN34 1 1 No Streptococcus equi subsp. equi 4047 1 1 No Streptococcus uberis 0140J 1 1 No Streptococcus parauberis KCTC 11537 2 2 No Streptococcus pneumoniae P1031 1 1 No Streptococcus sanguinis SK36 1 1 No Exiguobacterium sp. MH3 1 1 No Kyrpidia tusciae DSM 2912 7 6 No Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 1 1 No Brevibacillus brevis NBRC 100599 2 2 No Paenibacillus polymyxa M1 1 1 No Bacillus selenitireducens MLS10 2 2 No Geobacillus thermoglucosidasius C56-YS93 2 2 No Oceanobacillus iheyensis HTE831 1 1 No Anoxybacillus flavithermus WK1 3 3 No Geobacillus thermoleovorans CCB_US3_UF5 7 7 No Geobacillus kaustophilus HTA426 9 8 No Geobacillus sp. GHH01 5 5 No Geobacillus sp. WCH70 4 4 No Geobacillus thermodenitrificans NG80-2 1 1 No Bacillus sp. JS 1 1 No Bacillus sp. 1NLA3E 1 1 No Bacillus amyloliquefaciens FZB42 2 2 No Bacillus atrophaeus 1942 1 1 No Bacillus subtilis subsp. subtilis str. 168 1 1 No Bacillus licheniformis DSM 13 = ATCC 14580 3 3 No Bacillus halodurans C-125 2 2 No Bacillus weihenstephanensis KBAB4 1 1 No Bacillus cereus 03BB102 1 1 No Bacillus pseudofirmus OF4 1 1 No Bacillus clausii KSM-K16 4 4 No Bacillus cellulosilyticus DSM 2522 3 3 No Bacillus pumilus SAFR-032 1 1 No Bacillus megaterium DSM 319 2 2 No Bacillus coagulans 2-6 3 3 No Macrococcus caseolyticus JCSC5402 1 1 No Staphylococcus lugdunensis HKU09-01 1 1 No Staphylococcus carnosus subsp. carnosus TM300 1 1 No Staphylococcus aureus subsp. aureus JH1 1 1 No Staphylococcus aureus 1 1 No Gemmatimonas aurantiaca T-27 2 2 No Melioribacter roseus P3M 1 1 No Pelodictyon phaeoclathratiforme BU-1 1 1 No Chlorobium luteolum DSM 273 1 1 No Chlorobium chlorochromatii CaD3 1 1 No Chlorobium phaeobacteroides DSM 266 1 1 No Chlorobium limicola DSM 245 1 1 No Chloroherpeton thalassium ATCC 35110 2 2 No Haliscomenobacter hydrossis DSM 1100 2 2 No Niastella koreensis GR20-10 1 1 No Chitinophaga pinensis DSM 2588 2 2 No Salinibacter ruber M8 2 2 No Rhodothermus marinus DSM 4252 4 3 No Flexibacter litoralis DSM 6794 1 1 No Cyclobacterium marinum DSM 745 1 1 No Marivirga tractuosa DSM 4126 2 2 No Dyadobacter fermentans DSM 18053 1 1 No Cytophaga hutchinsonii ATCC 33406 1 1 No Spirosoma linguale DSM 74 1 1 No Runella slithyformis DSM 19594 2 2 No Prevotella ruminicola 23 1 1 No Bacteroides salanitronis DSM 18170 1 1 No Bacteroides thetaiotaomicron VPI-5482 1 1 No Bacteroides fragilis YCH46 1 1 No Pedobacter saltans DSM 12145 1 1 No Pedobacter heparinus DSM 2366 1 1 No Sphingobacterium sp. 21 2 2 No Owenweeksia hongkongensis DSM 17368 1 1 No Krokinobacter sp. 4H-3-7-5 1 1 No Maribacter sp. HTCC2170 2 2 No Robiginitalea biformata HTCC2501 1 1 No Ornithobacterium rhinotracheale DSM 15997 1 1 No Fibrobacter succinogenes subsp. succinogenes S85 2 2 No Waddlia chondrophila WSU 86-1044 1 1 No Candidatus Protochlamydia amoebophila UWE25 2 2 No Chlamydophila caviae GPIC 1 1 No Chlamydophila abortus S26/3 1 1 No Chlamydia psittaci 01DC11 1 1 No Planctomyces brasiliensis DSM 5305 1 1 No Planctomyces limnophilus DSM 3776 1 1 No Rhodopirellula baltica SH 1 2 2 No Coraliomargarita akajimensis DSM 45221 2 1 No Opitutus terrae PB90-1 3 3 No Thermovirga lienii DSM 17291 1 1 No Aminobacterium colombiense DSM 12261 1 1 No Thermanaerovibrio acidaminovorans DSM 6589 1 1 No Anaerobaculum mobile DSM 13181 2 2 No Leptospira borgpetersenii serovar Hardjo-bovis str. L550 1 1 No Leptospira interrogans serovar Lai str. IPAV 1 1 No Brachyspira murdochii DSM 12563 1 1 No Brachyspira intermedia PWS/A 1 1 No Brachyspira pilosicoli 95/1000 1 1 No Brachyspira hyodysenteriae WA1 1 1 No Borrelia garinii PBi 1 1 No Borrelia bissettii DN127 2 2 No Borrelia afzelii PKo 1 1 No Borrelia burgdorferi B31 1 1 No Borrelia recurrentis A1 2 1 No Borrelia duttonii Ly 3 3 No Borrelia crocidurae str. Achema 2 1 No Borrelia turicatae 91E135 1 1 No Borrelia hermsii DAH 1 1 No Spirochaeta caldaria DSM 7334 1 1 No Treponema primitia ZAS-2 1 1 No Treponema brennaborense DSM 12168 1 1 No Treponema paraluiscuniculi Cuniculi A 1 1 No Treponema succinifaciens DSM 2489 1 1 No Treponema pallidum subsp. pallidum SS14 2 2 No Spirochaeta africana DSM 8902 2 2 No Thermodesulfobacterium sp. OPB45 1 1 No Desulfurispirillum indicum S5 3 2 No Calditerrivibrio nitroreducens DSM 19672 2 2 No Denitrovibrio acetiphilus DSM 12809 2 1 No Deferribacter desulfuricans SSM1 2 2 No Flexistipes sinusarabici DSM 4947 1 1 No Marinitoga piezophila KA3 2 2 No Petrotoga mobilis SJ95 3 2 No Mesotoga prima MesG1.Ag.4.2 3 2 No Kosmotoga olearia TBF 19.5.1 1 1 No Fervidobacterium pennivorans DSM 9078 3 3 No Fervidobacterium nodosum Rt17-B1 4 4 No Thermosipho africanus TCF52B 2 2 No Thermotoga lettingae TMO 5 5 No Thermotoga thermarum DSM 5069 4 4 No Thermotoga sp. RQ2 4 2 No Thermotoga naphthophila RKU-10 4 2 No Thermotoga petrophila RKU-1 6 4 No Thermotoga neapolitana DSM 4359 4 3 No Thermotoga maritima MSB8 5 3 No Thermovibrio ammonificans HB-1 2 2 No Desulfurobacterium thermolithotrophum DSM 11699 1 1 No Sulfurihydrogenibium sp. YO3AOP1 2 1 No Sulfurihydrogenibium azorense Az-Fu1 3 3 No Hydrogenobaculum sp. SN 1 1 No Hydrogenobaculum sp. HO 1 1 No Hydrogenobaculum sp. Y04AAS1 2 2 No Thermocrinis albus DSM 14484 1 1 No Dictyoglomus turgidum DSM 6724 2 2 No Candidatus Chloracidobacterium thermophilum B 3 3 No Granulicella mallensis MP5ACTX8 1 1 No Thermodesulfovibrio yellowstonii DSM 11347 2 2 No Ilyobacter polytropus DSM 2926 1 1 No Candidatus Saccharimonas aalborgensis 1 1 No Bacteriovorax marinus SJ 3 3 No Bdellovibrio bacteriovorus HD100 1 1 No Nautilia profundicola AmH 1 1 No Nitratifractor salsuginis DSM 16511 3 3 No Campylobacter lari RM2100 1 1 No Campylobacter curvus 525.92 1 1 No Campylobacter concisus 13826 1 1 No Sulfurimonas denitrificans DSM 1251 1 1 No Helicobacter cetorum MIT 00-7128 2 2 No Helicobacter felis ATCC 49179 2 1 No Nitratiruptor sp. SB155-2 1 1 No Sulfurovum sp. NBC37-1 1 1 No Desulfobacca acetoxidans DSM 11109 1 1 No Desulfomonile tiedjei DSM 6799 3 3 No Desulfobulbus propionicus DSM 2032 1 1 No Desulfatibacillum alkenivorans AK-01 3 3 No Desulfomicrobium baculatum DSM 4028 1 1 No Desulfovibrio magneticus RS-1 2 2 No Desulfovibrio salexigens DSM 2638 1 1 No Geobacter daltonii FRC-32 1 1 No Geobacter uraniireducens Rf4 1 1 No Geobacter lovleyi SZ 4 4 No Pelobacter propionicus DSM 2379 1 1 No Babela massiliensis 1 1 No Sorangium cellulosum 'So ce 56' 2 2 No Anaeromyxobacter sp. Fw109-5 1 1 No Anaeromyxobacter dehalogenans 2CP-1 2 2 No Stigmatella aurantiaca DW4/3-1 3 3 No Corallococcus coralloides DSM 2259 7 5 No Myxococcus xanthus DK 1622 3 3 No Myxococcus fulvus HW-1 2 1 No Dechloromonas aromatica RCB 1 1 No Thauera sp. MZ1T 2 2 No Azoarcus sp. KH32C 2 2 No Azoarcus sp. BH72 1 1 No Aromatoleum aromaticum EbN1 2 2 No Pseudogulbenkiania sp. NH8B 1 1 No Laribacter hongkongensis HLHK9 1 1 No beta proteobacterium CB 1 1 No Burkholderia phytofirmans PsJN 1 1 No Burkholderia phymatum STM815 1 1 No Burkholderia xenovorans LB400 1 1 No Ralstonia pickettii 12D 1 1 No Burkholderia sp. RPE64 2 2 No Burkholderia thailandensis E264 4 4 No Burkholderia pseudomallei 1106a 4 3 No Burkholderia mallei SAVP1 5 5 No Burkholderia ambifaria AMMD 2 2 No Burkholderia cenocepacia HI2424 3 3 No Burkholderia multivorans ATCC 17616 3 3 No Burkholderia gladioli BSR3 2 2 No Polaromonas naphthalenivorans CJ2 1 1 No Variovorax paradoxus S110 1 1 No Acidovorax ebreus TPSY 1 1 No Acidovorax sp. KKS102 1 1 No Acidovorax sp. JS42 1 1 No Acidovorax citrulli AAC00-1 2 1 No Acidovorax avenae subsp. avenae ATCC 19860 2 2 No Herbaspirillum seropedicae SmR1 1 1 No Pusillimonas sp. T7-7 1 1 No Advenella kashmirensis WT001 1 1 No Taylorella asinigenitalis MCE3 2 2 No Taylorella equigenitalis MCE9 1 1 No Bordetella petrii DSM 12804 1 1 No Achromobacter xylosoxidans 1 1 No Nitrosospira multiformis ATCC 25196 1 1 No Nitrosomonas sp. Is79A3 1 1 No Nitrosomonas eutropha C91 1 1 No Nitrosomonas europaea ATCC 19718 1 1 No Sideroxydans lithotrophicus ES-1 1 1 No Methylotenera versatilis 301 1 1 No Methylobacillus flagellatus KT 1 1 No Magnetococcus marinus MC-1 2 2 No Parvularcula bermudensis HTCC2503 1 1 No Asticcacaulis excentricus CB 48 1 1 No Caulobacter sp. K31 2 2 No Caulobacter crescentus NA1000 1 1 No Caulobacter segnis ATCC 21756 1 1 No Erythrobacter litoralis HTCC2594 1 1 No Novosphingobium sp. PP1Y 1 1 No Novosphingobium aromaticivorans DSM 12444 2 2 No Sphingobium sp. SYK-6 1 1 No Hirschia baltica ATCC 49814 1 1 No Dinoroseobacter shibae DFL 12 2 2 No Phaeobacter gallaeciensis 2.10 2 2 No Pseudovibrio sp. FO-BEG1 1 1 No Ketogulonicigenium vulgare Y25 1 1 No Rhodobacter sphaeroides ATCC 17029 1 1 No Paracoccus denitrificans PD1222 1 1 No Tistrella mobilis KA081020-065 2 2 No Azospirillum lipoferum 4B 2 2 No Azospirillum brasilense Sp245 1 1 No Acidiphilium multivorum AIU301 2 2 No Acidiphilium cryptum JF-5 1 1 No Acetobacter pasteurianus IFO 3283-01 1 1 No Micavibrio aeruginosavorus ARL-13 2 2 No alpha proteobacterium HIMB5 1 1 No Wolbachia endosymbiont of Culex quinquefasciatus Pel 2 2 No Methylobacterium sp. 4-46 1 1 No Methylobacterium nodulans ORS 2060 2 2 No Methylobacterium radiotolerans JCM 2831 1 1 No Ochrobactrum anthropi ATCC 49188 1 1 No Brucella microti CCM 4915 2 2 No Brucella pinnipedialis B2/94 2 2 No Brucella canis ATCC 23365 2 2 No Brucella suis ATCC 23445 2 2 No Brucella melitensis ATCC 23457 2 2 No Brucella ovis ATCC 25840 2 2 No Brucella abortus S19 2 2 No Methylocella silvestris BL2 1 1 No Beijerinckia indica subsp. indica ATCC 9039 1 1 No Pelagibacterium halotolerans B2 3 3 No Rhodomicrobium vannielii ATCC 17100 1 1 No Hyphomicrobium sp. MC1 1 1 No Rhodopseudomonas palustris BisA53 2 2 No Methylocystis sp. SC2 1 1 No Bartonella henselae str. Houston-1 1 1 No Bartonella grahamii as4aup 1 1 No Teredinibacter turnerae T7901 1 1 No Cellvibrio japonicus Ueda107 2 2 No Oceanimonas sp. GK1 1 1 No Aeromonas salmonicida subsp. salmonicida A449 2 2 No Aeromonas hydrophila subsp. hydrophila ATCC 7966 1 1 No Vibrio sp. Ex25 1 1 No Vibrio harveyi ATCC BAA-1116 3 3 No Vibrio parahaemolyticus RIMD 2210633 1 1 No Photobacterium profundum SS9 1 1 No Psychromonas ingrahamii 37 4 4 No Shewanella piezotolerans WP3 1 1 No Shewanella loihica PV-4 1 1 No Shewanella oneidensis MR-1 1 1 No Shewanella baltica OS185 1 1 No Pseudoalteromonas atlantica T6c 1 1 No Glaciecola sp. 4H-3-7+YE-5 1 1 No Glaciecola nitratireducens FR1064 2 2 No Marinobacter adhaerens HP15 1 1 No Marinobacter hydrocarbonoclasticus ATCC 49840 1 1 No Marinobacter aquaeolei VT8 1 1 No Alteromonas sp. SN2 4 4 No Alteromonas macleodii str. 'Deep ecotype' 2 2 No Hahella chejuensis KCTC 2396 2 2 No Alcanivorax borkumensis SK2 1 1 No Marinomonas sp. MWYL1 1 1 No Chromohalobacter salexigens DSM 3043 1 1 No Halomonas elongata DSM 2581 3 3 No Methylomicrobium alcaliphilum 3 3 No Methylococcus capsulatus str. Bath 3 2 No Pseudoxanthomonas suwonensis 11-1 1 1 No Stenotrophomonas maltophilia K279a 2 2 No Xanthomonas axonopodis pv. citri str. 306 1 1 No Xanthomonas campestris pv. campestris str. B100 1 1 No Spiribacter sp. UAH-SP71 1 1 No Alkalilimnicola ehrlichii MLHE-1 2 2 No Thioalkalivibrio sulfidophilus HL-EbGr7 3 3 No Thioalkalivibrio sp. K90mix 1 1 No Allochromatium vinosum DSM 180 2 1 No Thiocystis violascens DSM 198 1 1 No Nitrosococcus halophilus Nc4 3 2 No Coxiella burnetii Dugway 5J108-111 1 1 No Legionella longbeachae NSW150 2 2 No gamma proteobacterium HdN1 1 1 No Photorhabdus asymbiotica 1 1 No Photorhabdus luminescens subsp. laumondii TTO1 2 2 No Xenorhabdus nematophila ATCC 19061 1 1 No Providencia stuartii MRSN 2154 1 1 No Rahnella sp. Y9602 3 3 No Rahnella aquatilis CIP 78.65 = ATCC 33071 3 3 No Yersinia pestis Pestoides F 1 1 No Yersinia enterocolitica subsp. enterocolitica 8081 1 1 No Serratia sp. AS12 2 2 No Serratia sp. ATCC 39006 1 1 No Serratia plymuthica AS9 2 2 No Serratia proteamaculans 568 1 1 No Dickeya dadantii Ech703 1 1 No Dickeya zeae Ech1591 1 1 No Pectobacterium wasabiae WPP163 2 2 No Pectobacterium sp. SCC3193 2 2 No Pectobacterium atrosepticum SCRI1043 1 1 No Pectobacterium carotovorum subsp. carotovorum PC1 1 1 No Pantoea sp. At-9b 1 1 No Pantoea ananatis LMG 20103 1 1 No Erwinia pyrifoliae Ep1/96 1 1 No Erwinia amylovora ATCC 49946 1 1 No Escherichia blattae DSM 4481 1 1 No Shigella flexneri 5 str. 8401 1 1 No Salmonella bongori NCTC 12419 1 1 No Klebsiella oxytoca E718 2 2 No Klebsiella variicola At-22 2 2 No Klebsiella pneumoniae NTUH-K2044 1 1 No Escherichia fergusonii ATCC 35469 1 1 No Enterobacter sp. R4-368 3 2 No Enterobacter sp. 638 1 1 No Enterobacter asburiae LF7a 1 1 No Enterobacter cloacae subsp. dissolvens SDM 1 1 No Citrobacter koseri ATCC BAA-895 1 1 No Pseudomonas stutzeri A1501 1 1 No Pseudomonas fulva 12-X 1 1 No Pseudomonas protegens Pf-5 1 1 No Pseudomonas sp. VLB120 2 2 No Moraxella catarrhalis RH4 1 1 No Acinetobacter calcoaceticus PHEA-2 1 1 No Methylophaga sp. JAM1 2 2 No Thioalkalimicrobium cyclicum ALM1 1 1 No Francisella tularensis subsp. tularensis WY96-3418 1 1 No Francisella cf. novicida 3523 1 1 No Francisella novicida U112 1 1 No Nanoarchaeum equitans Kin4-M 1 1 No Candidatus Caldiarchaeum subterraneum 2 2 No Cenarchaeum symbiosum A 1 1 No Candidatus Nitrosopumilus sp. AR2 3 2 No Nitrosopumilus maritimus SCM1 1 1 No Candidatus Korarchaeum cryptofilum OPF8 2 2 No Fervidicoccus fontis Kam940 1 1 No Pyrolobus fumarii 1A 2 2 No Hyperthermus butylicus DSM 5456 3 3 No Thermogladius cellulolyticus 1633 2 2 No Ignisphaera aggregans DSM 17230 6 6 No Aeropyrum pernix K1 3 3 No Thermosphaera aggregans DSM 11486 2 2 No Metallosphaera cuprina Ar-4 1 1 No Metallosphaera sedula DSM 5348 3 3 No Acidianus hospitalis W1 1 1 No Sulfolobus tokodaii str. 7 1 1 No Sulfolobus solfataricus P2 1 1 No Thermofilum sp. 1910b 5 5 No Thermofilum pendens Hrk 5 3 3 No Vulcanisaeta distributa DSM 14429 4 4 No Caldivirga maquilingensis IC-167 3 3 No Pyrobaculum sp. 1860 12 12 No Pyrobaculum calidifontis JCM 11548 2 2 No Pyrobaculum arsenaticum DSM 13514 5 5 No Pyrobaculum oguniense TE7 3 3 No Thermoproteus neutrophilus V24Sta 4 4 No Pyrobaculum aerophilum str. IM2 8 8 No Pyrobaculum islandicum DSM 4184 1 1 No Thermoproteus tenax Kra 1 3 3 No halophilic archaeon DL31 2 2 No Methanocella conradii HZ254 1 1 No Methanosaeta harundinacea 6Ac 1 1 No Methanosaeta thermophila PT 1 1 No Methanosalsum zhilinae DSM 4017 2 2 No Methanohalobium evestigatum Z-7303 2 2 No Methanosarcina acetivorans C2A 3 3 No Methanosarcina mazei Go1 3 3 No Methanosarcina barkeri str. Fusaro 1 1 No Methanohalophilus mahii DSM 5219 2 1 No Methanosphaerula palustris E1-9c 1 1 No Methanoregula boonei 6A8 2 2 No Methanospirillum hungatei JF-1 1 1 No Methanoplanus petrolearius DSM 11571 1 1 No Methanopyrus kandleri AV19 3 3 No Ferroglobus placidus DSM 10642 1 1 No Archaeoglobus profundus DSM 5631 2 1 No Thermococcus sp. 4557 2 1 No Thermococcus onnurineus NA1 2 1 No Thermococcus kodakarensis KOD1 1 1 No Thermococcus gammatolerans EJ3 2 2 No Thermococcus sibiricus MM 739 2 1 No Thermococcus barophilus MP 2 1 No Pyrococcus sp. ST04 3 2 No Pyrococcus yayanosii CH1 2 2 No Pyrococcus horikoshii OT3 3 2 No Pyrococcus abyssi GE5 2 2 No Pyrococcus furiosus COM1 1 1 No Thermoplasma acidophilum DSM 1728 1 1 No Salinarchaeum sp. Harcht-Bsk1 6 5 No Halopiger xanaduensis SH-6 4 4 No Haloterrigena turkmenica DSM 5511 5 5 No Natrinema sp. J7-2 5 5 No Natrialba magadii ATCC 43099 10 10 No Halorubrum lacusprofundi ATCC 49239 5 5 No Haloquadratum walsbyi DSM 16790 2 2 No Halogeometricum borinquense DSM 11551 3 3 No Haloferax mediterranei ATCC 33500 4 3 No Haloferax volcanii DS2 4 3 No Halomicrobium mukohataei DSM 12286 5 4 No Halorhabdus utahensis DSM 12940 1 1 No Natronomonas pharaonis DSM 2160 4 4 No Haloarcula hispanica ATCC 33960 4 4 No Haloarcula marismortui ATCC 43049 4 4 No Halalkalicoccus jeotgali B3 1 1 No Halobacterium salinarum R1 3 3 No Halobacterium sp. NRC-1 3 3 No Methanotorris igneus Kol 5 1 1 No Methanocaldococcus fervens AG86 1 1 No Methanothermus fervidus DSM 2088 1 1 No Methanosphaera stadtmanae DSM 3091 1 1 No Methanobrevibacter ruminantium M1 1 1 No Methanobrevibacter smithii ATCC 35061 1 1 No Aciduliprofundum sp. MAR08-339 1 1 No Aciduliprofundum boonei T469 3 3 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 80 77 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 34 32 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 40 38 No Ascaris suum Victoria/Ghent Pig roundworm 32 24 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 29 23 No Cryptococcus neoformans var. grubii H99 6 6 No Cryptococcus neoformans B-3501A 9 9 No Cryptococcus neoformans JEC21 7 7 No Paracoccidioides brasiliensis Pb01 8 8 No Paracoccidioides brasiliensis Pb03 8 8 No Coccidioides posadasii str. Silveira 4 4 No Coccidioides immitis RMSCC 3703 2 2 No Coccidioides immitis RMSCC 2394 4 4 No Coccidioides immitis H538.4 3 3 No Ajellomyces dermatitidis ER-3 6 6 No Histoplasma capsulatum H143 4 4 No Histoplasma capsulatum H88 4 4 No Histoplasma capsulatum G186AR 3 3 No Aspergillus fumigatus A1163 8 7 No Candida albicans WO-1 6 6 No Saccharomyces cerevisiae UC5 4 3 No Saccharomyces cerevisiae PW5 5 4 No Saccharomyces cerevisiae FL100 2 2 No Saccharomyces cerevisiae CLIB382 3 2 No Saccharomyces cerevisiae CLIB324 4 3 No Saccharomyces cerevisiae CBS7960 4 4 No Saccharomyces cerevisiae YJM269 5 4 No Saccharomyces cerevisiae T7 5 4 No Saccharomyces cerevisiae FostersB 5 4 No Saccharomyces cerevisiae FostersO 7 6 No Saccharomyces cerevisiae VL3 6 5 No Saccharomyces cerevisiae Vin13 5 4 No Saccharomyces cerevisiae LalvinQA23 8 7 No Saccharomyces cerevisiae AWRI796 5 4 No Saccharomyces cerevisiae Sigma1278b 6 5 No Saccharomyces cerevisiae W303 7 6 No Saccharomyces cerevisiae JAY291 6 5 No Saccharomyces cerevisiae AWRI1631 4 3 No Saccharomyces cerevisiae YPS163 4 3 No Saccharomyces cerevisiae M22 1 1 No Saccharomyces cerevisiae T73 4 3 No Saccharomyces cerevisiae CLIB215 4 3 No Saccharomyces cerevisiae Y10 1 1 No Saccharomyces cerevisiae YJM789 7 6 No Saccharomyces cerevisiae YJM789 7 6 No Saccharomyces cerevisiae RM11-1a 7 6 No Saccharomyces cerevisiae RM11-1a 7 6 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 6 5 No Schizosaccharomyces pombe 972h- 10 9 No Batrachochytrium dendrobatidis JEL423 5 5 No Batrachochytrium dendrobatidis JAM81 3 3 No Theobroma cacao Matina 1-6 v0.9 Cacao 20 17 No Hordeum vulgare 22 Domesticated barley 55 55 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 24 22 No Trypanosoma brucei Lister 427 v4.1 9 5 No Neospora caninum Nc-Liverpool 6.2 2 2 No Plasmodium falciparum HB3 4 4 No Plasmodium falciparum Dd2 4 4 No Chroococcidiopsis thermalis PCC 7203 1 1 No Chamaesiphon minutus PCC 6605 1 1 No Synechocystis sp. PCC 6803 substr. PCC-P 1 1 No Synechocystis sp. PCC 6803 substr. PCC-N 1 1 No Synechocystis sp. PCC 6803 substr. GT-I 1 1 No Synechocystis sp. PCC 6803 1 1 No Dactylococcopsis salina PCC 8305 2 2 No Synechococcus sp. JA-2-3B'a(2-13) 5 5 No Synechococcus sp. JA-3-3Ab 7 7 No Synechococcus sp. CC9902 1 1 No Synechococcus sp. CC9605 1 1 No Synechococcus elongatus PCC 6301 1 1 No Prochlorococcus marinus str. MIT 9301 1 1 No Prochlorococcus marinus str. AS9601 1 1 No Prochlorococcus marinus subsp. pastoris str. CCMP1986 1 1 No Prochlorococcus marinus str. MIT 9215 1 1 No Prochlorococcus marinus str. MIT 9313 1 1 No Prochlorococcus marinus str. MIT 9312 1 1 No Prochlorococcus marinus str. MIT 9303 1 1 No Crinalium epipsammum PCC 9333 2 2 No Oscillatoria nigro-viridis PCC 7112 6 6 No Oscillatoria acuminata PCC 6304 6 6 No Arthrospira platensis NIES-39 7 5 No Cyanothece sp. PCC 7822 7 7 No Cyanothece sp. PCC 7425 2 2 No Cyanothece sp. PCC 7424 5 4 No Cyanothece sp. ATCC 51142 4 4 No Cyanothece sp. PCC 8801 1 1 No Cyanobacterium aponinum PCC 10605 2 2 No Gloeobacter kilaueensis Gloeobacter sp. JS 1 1 No Pleurocapsa minor Pleurocapsa sp. PCC 7327 4 4 No Stanieria cyanosphaera PCC 7437 2 2 No Calothrix parietina Calothrix sp. PCC 6303 5 5 No Anabaena cylindrica PCC 7122 4 3 No Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 1 1 No Spiroplasma apis B31 1 1 No Mycoplasma leachii PG50 1 1 No Candidatus Mycoplasma haemominutum 'Birmingham 1' 1 1 No Mycoplasma cynos C142 2 2 No Mycoplasma pneumoniae M129-B7 2 2 No Mycoplasma pneumoniae FH 1 1 No Mycoplasma pneumoniae M129 1 1 No Gordonibacter pamelaeae 7-10-1-b 1 1 No Adlercreutzia equolifaciens DSM 19450 2 2 No Streptomyces rapamycinicus NRRL 5491 1 1 No Streptomyces venezuelae ATCC 10712 1 1 No Streptomyces collinus Tu 365 1 1 No Saccharothrix espanaensis DSM 44229 2 1 No Amycolatopsis mediterranei RB 2 2 No Amycolatopsis mediterranei S699 2 2 No Amycolatopsis mediterranei S699 2 2 No Amycolatopsis orientalis HCCB10007 1 1 No Nocardia brasiliensis ATCC 700358 1 1 No Mycobacterium tuberculosis CAS/NITR204 1 1 No Mycobacterium gilvum Spyr1 1 1 No Corynebacterium ulcerans BR-AD22 1 1 No Corynebacterium ulcerans 809 2 2 No Corynebacterium pseudotuberculosis 258 1 1 No Corynebacterium pseudotuberculosis P54B96 1 1 No Corynebacterium pseudotuberculosis 267 1 1 No Corynebacterium pseudotuberculosis 42/02-A 1 1 No Corynebacterium pseudotuberculosis 3/99-5 1 1 No Corynebacterium pseudotuberculosis CIP 52.97 1 1 No Corynebacterium pseudotuberculosis PAT10 1 1 No Corynebacterium pseudotuberculosis I19 1 1 No Corynebacterium pseudotuberculosis FRC41 1 1 No Corynebacterium pseudotuberculosis C231 1 1 No Corynebacterium pseudotuberculosis 1002 1 1 No Corynebacterium diphtheriae HC02 1 1 No Gardnerella vaginalis HMP9231 2 2 No Gardnerella vaginalis ATCC 14019 2 2 No Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 2 2 No Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 2 2 No Actinomyces graevenitzii C83 1 1 No Dehalococcoides mccartyi BTF08 2 2 No Deinococcus peraridilitoris DSM 19664 1 1 No Thermus oshimai JL-2 1 1 No Thermus thermophilus JL-18 1 1 No Thermus thermophilus HB8 1 1 No Erysipelothrix rhusiopathiae SY1027 2 2 No Clostridium thermocellum DSM 1313 3 3 No [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 1 1 No Ruminococcus champanellensis 18P13 1 1 No Clostridium acidurici 9a 3 3 No Desulfosporosinus meridiei DSM 13257 2 2 No Desulfitobacterium dichloroeliminans LMG P-21439 1 1 No Desulfitobacterium hafniense DCB-2 4 4 No Desulfotomaculum gibsoniae DSM 7213 1 1 No Clostridium difficile BI1 6 5 No Clostridium difficile R20291 4 4 No Clostridium difficile CD196 4 4 No Roseburia intestinalis XB6B4 2 2 No Clostridium saccharobutylicum DSM 13864 4 4 No Clostridium autoethanogenum DSM 10061 1 1 No Clostridium saccharoperbutylacetonicum N1-4(HMT) 1 1 No Clostridium kluyveri NBRC 12016 2 2 No Clostridium perfringens SM101 1 1 No Clostridium pasteurianum BC1 5 5 No Clostridium botulinum H04402 065 2 2 No Clostridium botulinum BKT015925 2 2 No Clostridium botulinum F str. Langeland 3 3 No Clostridium botulinum B1 str. Okra 4 4 No Clostridium botulinum Ba4 str. 657 3 3 No Clostridium botulinum A2 str. Kyoto 2 2 No Clostridium botulinum A3 str. Loch Maree 2 2 No Clostridium botulinum A str. Hall 2 2 No Clostridium botulinum A str. ATCC 19397 4 4 No Clostridium acetobutylicum DSM 1731 2 2 No Clostridium acetobutylicum EA 2018 2 2 No Thermoanaerobacterium saccharolyticum JW/SL-YS485 4 4 No Thermoanaerobacterium thermosaccharolyticum M0795 2 2 No Thermacetogenium phaeum DSM 12270 2 2 No Thermoanaerobacter sp. X513 2 2 No Enterococcus mundtii QU 25 1 1 No Enterococcus faecium Aus0085 3 3 No Enterococcus faecium NRRL B-2354 4 4 No Enterococcus faecium DO 2 2 No Enterococcus faecalis str. Symbioflor 1 1 1 No Enterococcus faecalis V583 1 1 No Leuconostoc carnosum JB16 1 1 No Leuconostoc mesenteroides subsp. mesenteroides J18 1 1 No Leuconostoc gelidum JB7 2 2 No Lactobacillus paracasei subsp. paracasei 8700:2 5 5 No Lactobacillus casei LOCK919 2 2 No Lactobacillus casei W56 1 1 No Lactobacillus casei LC2W 1 1 No Lactobacillus casei BD-II 1 1 No Lactobacillus casei BL23 1 1 No Lactobacillus casei str. Zhang 2 2 No Lactobacillus rhamnosus LOCK908 2 2 No Lactobacillus rhamnosus LOCK900 2 2 No Lactobacillus rhamnosus ATCC 8530 2 2 No Lactobacillus rhamnosus GG 2 2 No Lactobacillus rhamnosus GG 2 2 No Lactobacillus johnsonii N6.2 3 3 No Lactobacillus johnsonii DPC 6026 4 3 No Lactobacillus johnsonii NCC 533 3 2 No Lactobacillus salivarius UCC118 3 3 No Lactobacillus fermentum F-6 1 1 No Lactobacillus fermentum CECT 5716 2 2 No Lactobacillus reuteri TD1 2 2 No Lactobacillus reuteri JCM 1112 3 3 No Lactobacillus reuteri SD2112 2 2 No Lactobacillus plantarum 16 1 1 No Lactobacillus plantarum ZJ316 1 1 No Lactobacillus plantarum subsp. plantarum ST-III 2 2 No Lactobacillus plantarum subsp. plantarum P-8 1 1 No Lactobacillus helveticus CNRZ32 1 1 No Lactobacillus delbrueckii subsp. bulgaricus ND02 2 2 No Lactobacillus brevis KB290 1 1 No Lactobacillus acidophilus La-14 1 1 No Lactobacillus acidophilus NCFM 1 1 No Pediococcus pentosaceus SL4 1 1 No Lactococcus lactis subsp. lactis IO-1 1 1 No Lactococcus lactis subsp. lactis Il1403 1 1 No Streptococcus anginosus C1051 2 2 No Streptococcus equi subsp. zooepidemicus ATCC 35246 1 1 No Streptococcus equi subsp. zooepidemicus MGCS10565 2 2 No Streptococcus equi subsp. zooepidemicus 1 1 No Streptococcus dysgalactiae subsp. equisimilis RE378 2 2 No Streptococcus oligofermentans AS 1.3089 1 1 No Streptococcus pyogenes MGAS1882 1 1 No Streptococcus pyogenes MGAS15252 1 1 No Streptococcus pyogenes MGAS10750 1 1 No Streptococcus pyogenes MGAS10270 1 1 No Streptococcus pyogenes NZ131 1 1 No Streptococcus pneumoniae gamPNI0373 1 1 No Streptococcus pneumoniae AP200 1 1 No Streptococcus agalactiae NEM316 1 1 No Streptococcus suis TL13 3 2 No Streptococcus suis D12 2 2 No Thermobacillus composti KWC4 1 1 No Paenibacillus sp. Y412MC10 1 1 No Paenibacillus mucilaginosus KNP414 1 1 No Paenibacillus mucilaginosus K02 1 1 No Paenibacillus larvae subsp. larvae DSM 25430 1 1 No Paenibacillus polymyxa CR1 1 1 No Paenibacillus polymyxa SC2 1 1 No Paenibacillus polymyxa E681 1 1 No Listeria monocytogenes EGD sequence 1 1 No Listeria monocytogenes M7 2 2 No Listeria monocytogenes J1-220 1 1 No Listeria monocytogenes SLCC5850 1 1 No Listeria monocytogenes SLCC2479 1 1 No Listeria monocytogenes SLCC2540 1 1 No Listeria monocytogenes serotype 1/2b str. SLCC2755 1 1 No Listeria monocytogenes serotype 1/2c str. SLCC2372 1 1 No Listeria monocytogenes 08-5578 1 1 No Listeria monocytogenes 08-5923 1 1 No Listeria monocytogenes L99 2 2 No Listeria monocytogenes HCC23 2 2 No Listeria monocytogenes FSL R2-561 1 1 No Geobacillus sp. C56-T3 8 8 No Geobacillus sp. Y4.1MC1 2 2 No Geobacillus sp. Y412MC52 5 5 No Geobacillus sp. Y412MC61 5 5 No Bacillus amyloliquefaciens subsp. plantarum sequencing 2 2 No Bacillus amyloliquefaciens subsp. plantarum UCMB5033 2 2 No Bacillus amyloliquefaciens subsp. plantarum AS43.3 2 2 No Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 2 2 No Bacillus amyloliquefaciens subsp. plantarum UCMB5113 2 2 No Bacillus amyloliquefaciens subsp. plantarum UCMB5036 2 2 No Bacillus amyloliquefaciens subsp. plantarum CAU B946 2 2 No Bacillus amyloliquefaciens LFB112 3 3 No Bacillus amyloliquefaciens CC178 2 2 No Bacillus amyloliquefaciens Y2 1 1 No Bacillus amyloliquefaciens IT-45 2 2 No Bacillus amyloliquefaciens XH7 4 4 No Bacillus amyloliquefaciens LL3 3 3 No Bacillus amyloliquefaciens TA208 4 4 No Bacillus amyloliquefaciens DSM 7 4 4 No Bacillus licheniformis 9945A 3 3 No Bacillus subtilis PY79 1 1 No Bacillus subtilis XF-1 1 1 No Bacillus subtilis QB928 1 1 No Bacillus subtilis BSn5 1 1 No Bacillus subtilis subsp. subtilis str. BAB-1 1 1 No Bacillus subtilis subsp. subtilis str. BSP1 1 1 No Bacillus subtilis subsp. subtilis 6051-HGW 1 1 No Bacillus subtilis subsp. spizizenii TU-B-10 2 2 No Bacillus subtilis subsp. spizizenii str. W23 1 1 No Bacillus subtilis subsp. natto BEST195 1 1 No Bacillus licheniformis DSM 13 = ATCC 14580 3 3 No Bacillus infantis NRRL B-14911 2 2 No Bacillus cereus subsp. cytotoxis NVH 391-98 6 6 No Bacillus toyonensis BCT-7112 1 1 No Bacillus thuringiensis HD-771 6 6 No Bacillus thuringiensis HD-789 2 2 No Bacillus thuringiensis MC28 2 2 No Bacillus thuringiensis serovar chinensis CT-43 2 2 No Bacillus thuringiensis YBT-1518 3 3 No Bacillus thuringiensis Bt407 2 2 No Bacillus thuringiensis serovar konkukian str. 97-27 2 2 No Bacillus thuringiensis serovar kurstaki str. HD73 9 9 No Bacillus thuringiensis serovar finitimus YBT-020 3 3 No Bacillus thuringiensis serovar thuringiensis str. IS5056 2 2 No Bacillus cereus FRI-35 1 1 No Bacillus cereus AH820 1 1 No Bacillus cereus AH187 4 4 No Bacillus cereus B4264 2 2 No Bacillus cereus G9842 2 2 No Bacillus cereus Q1 1 1 No Bacillus cereus NC7401 3 3 No Bacillus cereus E33L 2 2 No Bacillus cereus ATCC 14579 1 1 No Bacillus cereus ATCC 10987 2 2 No Bacillus anthracis str. H9401 1 1 No Bacillus anthracis str. CDC 684 1 1 No Bacillus anthracis str. 'Ames Ancestor' 1 1 No Bacillus anthracis str. Sterne 2 2 No Bacillus megaterium WSH-002 1 1 No Bacillus megaterium QM B1551 2 2 No Staphylococcus pasteuri SP1 2 2 No Staphylococcus lugdunensis N920143 1 1 No Staphylococcus warneri SG1 1 1 No Staphylococcus aureus CA-347 1 1 No Staphylococcus aureus Bmb9393 1 1 No Staphylococcus aureus M1 1 1 No Staphylococcus aureus 08BA02176 1 1 No Staphylococcus aureus ST228/18412 1 1 No Staphylococcus aureus ST228/18341 1 1 No Staphylococcus aureus ST228/16125 1 1 No Staphylococcus aureus ST228/16035 1 1 No Staphylococcus aureus ST228/15532 1 1 No Staphylococcus aureus ST228/10497 1 1 No Staphylococcus aureus ST228/10388 1 1 No Staphylococcus aureus subsp. aureus 11819-97 1 1 No Staphylococcus aureus subsp. aureus HO 5096 0412 2 2 No Staphylococcus aureus subsp. aureus ED133 2 2 No Staphylococcus aureus subsp. aureus ED98 1 1 No Staphylococcus aureus subsp. aureus 55/2053 2 2 No Staphylococcus aureus subsp. aureus TCH60 1 1 No Staphylococcus aureus subsp. aureus S0385 2 2 No Staphylococcus aureus subsp. aureus USA300_TCH1516 2 2 No Staphylococcus aureus subsp. aureus USA300_FPR3757 2 2 No Staphylococcus aureus subsp. aureus JH9 1 1 No Staphylococcus aureus subsp. aureus MSSA476 1 1 No Staphylococcus aureus subsp. aureus MRSA252 1 1 No Staphylococcus aureus subsp. aureus MW2 1 1 No Staphylococcus aureus subsp. aureus COL 1 1 No Staphylococcus aureus subsp. aureus NCTC 8325 1 1 No Salinibacter ruber DSM 13855 3 3 No Rhodothermus marinus SG0.5JP17-172 2 2 No Echinicola vietnamensis DSM 17526 1 1 No Alistipes shahii WAL 8301 1 1 No Psychroflexus torquis ATCC 700755 2 2 No Fibrobacter succinogenes subsp. succinogenes S85 2 2 No Chlamydia psittaci 01DC12 1 1 No Chlamydia psittaci WC 1 1 No Chlamydia psittaci M56 2 2 No Chlamydia psittaci WS/RT/E30 1 1 No Chlamydia psittaci VS225 2 2 No Chlamydia psittaci MN 1 1 No Chlamydia psittaci GR9 1 1 No Chlamydia psittaci 84/55 1 1 No Chlamydia psittaci 08DC60 1 1 No Chlamydia psittaci 02DC15 1 1 No Chlamydia psittaci C19/98 1 1 No Chlamydia psittaci NJ1 1 1 No Chlamydia psittaci CP3 1 1 No Chlamydophila psittaci RD1 1 1 No Chlamydia psittaci Mat116 2 2 No Chlamydophila psittaci 6BC 1 1 No Chlamydophila psittaci 6BC 1 1 No Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 1 1 No Leptospira interrogans serovar Lai str. 56601 1 1 No Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 1 1 No Brachyspira pilosicoli WesB 1 1 No Brachyspira pilosicoli B2904 1 1 No Brachyspira pilosicoli P43/6/78 1 1 No Borrelia garinii NMJW1 1 1 No Borrelia garinii BgVir 1 1 No Borrelia afzelii PKo 1 1 No Borrelia burgdorferi JD1 4 4 No Borrelia burgdorferi N40 2 2 No Borrelia miyamotoi LB-2001 1 1 No Treponema pallidum str. Fribourg-Blanc 1 1 No Treponema pallidum subsp. pertenue str. Gauthier 1 1 No Treponema pallidum subsp. pertenue str. CDC2 1 1 No Treponema pallidum subsp. pertenue str. SamoaD 1 1 No Treponema pallidum subsp. pallidum str. Mexico A 1 1 No Treponema pallidum subsp. pallidum str. Chicago 1 1 No Treponema pallidum subsp. pallidum DAL-1 1 1 No Treponema pallidum subsp. pallidum str. Nichols 1 1 No Thermotoga maritima MSB8 5 3 No Fusobacterium nucleatum subsp. animalis 4_8 1 1 No Bdellovibrio exovorus JSS 2 2 No Bdellovibrio bacteriovorus str. Tiberius 1 1 No Campylobacter coli 15-537360 1 1 No Campylobacter coli CVM N29710 1 1 No Helicobacter pylori Aklavik86 1 1 No Helicobacter pylori ELS37 1 1 No Helicobacter pylori India7 1 1 No Desulfovibrio hydrothermalis AM13 = DSM 14728 2 2 No Desulfovibrio gigas DSM 1382 = ATCC 19364 1 1 No Geobacter sp. M18 1 1 No Anaeromyxobacter sp. K 2 2 No Anaeromyxobacter dehalogenans 2CP-C 1 1 No Myxococcus stipitatus DSM 14675 4 3 No Neisseria meningitidis 8013 1 1 No Neisseria meningitidis Z2491 1 1 No Neisseria meningitidis MC58 1 1 No Burkholderia phenoliruptrix BR3459a 3 3 No Ralstonia pickettii 12J 1 1 No Ralstonia solanacearum FQY_4 1 1 No Ralstonia solanacearum Po82 1 1 No Ralstonia solanacearum PSI07 1 1 No Ralstonia solanacearum CMR15 1 1 No Polynucleobacter necessarius subsp. necessarius STIR1 1 1 No Burkholderia sp. YI23 2 2 No Burkholderia sp. CCGE1003 2 1 No Burkholderia sp. CCGE1001 1 1 No Burkholderia thailandensis MSMB121 2 2 No Burkholderia pseudomallei MSHR305 2 2 No Burkholderia pseudomallei NCTC 13179 3 3 No Burkholderia pseudomallei BPC006 2 2 No Burkholderia pseudomallei 1026b 2 2 No Burkholderia pseudomallei MSHR346 1 1 No Burkholderia pseudomallei 668 2 2 No Burkholderia pseudomallei 1710b 2 2 No Burkholderia pseudomallei K96243 2 2 No Burkholderia mallei NCTC 10229 2 2 No Burkholderia mallei NCTC 10247 2 2 No Burkholderia mallei ATCC 23344 5 4 No Burkholderia lata 1 1 No Burkholderia ambifaria MC40-6 1 1 No Burkholderia cenocepacia MC0-3 4 4 No Burkholderia cenocepacia AU 1054 3 3 No Burkholderia cenocepacia J2315 3 3 No Burkholderia multivorans ATCC 17616 3 3 No Burkholderia cepacia GG4 2 2 No Taylorella asinigenitalis 14/45 1 1 No Taylorella equigenitalis 14/56 1 1 No Taylorella equigenitalis ATCC 35865 1 1 No Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 1 1 No Sulfuricella denitrificans skB26 1 1 No Caulobacter crescentus CB15 1 1 No Zymomonas mobilis subsp. mobilis CP4 1 1 No Phaeobacter gallaeciensis DSM 17395 2 2 No Phaeobacter gallaeciensis DSM 26640 2 2 No Rhodobacter sphaeroides KD131 1 1 No Rhodobacter sphaeroides ATCC 17025 1 1 No Rhodobacter sphaeroides 2.4.1 1 1 No Rhodospirillum rubrum ATCC 11170 1 1 No Acetobacter pasteurianus 386B 1 1 No Acetobacter pasteurianus IFO 3283-12 1 1 No Acetobacter pasteurianus IFO 3283-01-42C 1 1 No Acetobacter pasteurianus IFO 3283-32 1 1 No Acetobacter pasteurianus IFO 3283-26 1 1 No Acetobacter pasteurianus IFO 3283-22 1 1 No Acetobacter pasteurianus IFO 3283-07 1 1 No Acetobacter pasteurianus IFO 3283-03 1 1 No Wolbachia endosymbiont of Drosophila simulans wHa 1 1 No Wolbachia endosymbiont of Drosophila simulans wNo 1 1 No Brucella ceti TE10759-12 1 1 No Brucella canis HSK A52141 2 2 No Brucella suis VBI22 2 2 No Brucella suis 1330 2 2 No Brucella suis 1330 2 2 No Brucella melitensis NI 2 2 No Brucella melitensis M5-90 2 2 No Brucella melitensis M28 2 2 No Brucella abortus A13334 2 2 No Brucella melitensis biovar Abortus 2308 2 2 No Brucella abortus bv. 1 str. 9-941 2 2 No Rhizobium leguminosarum bv. trifolii WSM1325 1 1 No Hyphomicrobium denitrificans 1NES1 1 1 No Rhodopseudomonas palustris BisB18 2 2 No Bradyrhizobium oligotrophicum S58 1 1 No Simiduia agarivorans SA1 = DSM 21679 2 2 No Mannheimia haemolytica USMARC_2286 2 2 No Mannheimia haemolytica M42548 3 3 No Mannheimia haemolytica D174 5 5 No Mannheimia haemolytica D171 2 2 No Mannheimia haemolytica D153 3 3 No Mannheimia haemolytica USDA-ARS-USMARC-183 3 3 No Mannheimia haemolytica USDA-ARS-USMARC-185 2 2 No Pasteurella multocida subsp. multocida str. HN06 1 1 No Haemophilus influenzae KR494 1 1 No Haemophilus influenzae F3031 1 1 No Haemophilus influenzae 10810 1 1 No Haemophilus influenzae 86-028NP 1 1 No Aeromonas hydrophila ML09-119 1 1 No Shewanella sp. ANA-3 2 2 No Shewanella baltica OS678 1 1 No Shewanella baltica OS195 1 1 No Glaciecola psychrophila 170 3 2 No Alteromonas macleodii str. 'Ionian Sea UM4b' 3 2 No Alteromonas macleodii str. 'Ionian Sea UM7' 3 2 No Alteromonas macleodii str. 'Ionian Sea U8' 1 1 No Alteromonas macleodii str. 'Ionian Sea U7' 1 1 No Alteromonas macleodii str. 'Ionian Sea U4' 1 1 No Alteromonas macleodii str. 'Aegean Sea MED64' 2 2 No Alteromonas macleodii str. 'English Channel 615' 2 2 No Alteromonas macleodii AltDE1 2 1 No Alteromonas macleodii str. 'English Channel 673' 2 2 No Alteromonas macleodii str. 'Balearic Sea AD45' 3 3 No Alteromonas macleodii str. 'Black Sea 11' 1 1 No Alteromonas macleodii ATCC 27126 2 2 No Thalassolituus oleivorans MIL-1 1 1 No Stenotrophomonas maltophilia D457 2 2 No Stenotrophomonas maltophilia JV3 1 1 No Stenotrophomonas maltophilia R551-3 1 1 No Xanthomonas citri subsp. citri Aw12879 2 2 No Xanthomonas axonopodis pv. citrumelo F1 1 1 No Xanthomonas axonopodis Xac29-1 1 1 No Thioalkalivibrio nitratireducens DSM 14787 1 1 No Thioflavicoccus mobilis 8321 1 1 No Coxiella burnetii CbuK_Q154 1 1 No Coxiella burnetii CbuG_Q212 1 1 No Coxiella burnetii RSA 331 1 1 No Coxiella burnetii RSA 493 1 1 No Proteus mirabilis BB2000 1 1 No Rahnella aquatilis HX2 3 3 No Yersinia pestis A1122 1 1 No Yersinia pestis Z176003 1 1 No Yersinia pestis D182038 1 1 No Yersinia pestis D106004 1 1 No Yersinia pestis biovar Medievalis str. Harbin 35 1 1 No Yersinia pestis Nepal516 1 1 No Yersinia pestis Antiqua 1 1 No Yersinia pestis Angola 1 1 No Yersinia pestis CO92 1 1 No Yersinia pestis KIM10+ 1 1 No Serratia sp. AS13 2 2 No Serratia plymuthica S13 1 1 No Serratia plymuthica 4Rx13 1 1 No Serratia marcescens FGI94 2 2 No Serratia marcescens WW4 1 1 No Serratia liquefaciens ATCC 27592 2 2 No Dickeya dadantii Ech586 2 2 No Dickeya dadantii 3937 1 1 No Pectobacterium carotovorum subsp. carotovorum PCC21 1 1 No Pantoea ananatis LMG 5342 1 1 No Pantoea ananatis PA13 1 1 No Pantoea ananatis AJ13355 2 2 No Erwinia pyrifoliae DSM 12163 1 1 No Erwinia amylovora CFBP1430 1 1 No Raoultella ornithinolytica B6 1 1 No Shigella flexneri 2002017 2 2 No Shigella flexneri 2a str. 2457T 1 1 No Shigella flexneri 2a str. 301 1 1 No Salmonella bongori N268-08 1 1 No Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 1 1 No Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 1 1 No Salmonella enterica subsp. enterica serovar Newport str. SL254 1 1 No Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 1 1 No Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 2 2 No Salmonella enterica subsp. enterica serovar Typhimurium str. U288 1 1 No Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 1 1 No Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 1 1 No Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 1 1 No Salmonella enterica subsp. enterica serovar Typhi str. CT18 1 1 No Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 1 1 No Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 1 1 No Salmonella enterica subsp. enterica serovar Heidelberg str. B182 1 1 No Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 2 2 No Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 1 1 No Salmonella enterica subsp. enterica serovar Pullorum str. S06004 1 1 No Klebsiella oxytoca KCTC 1686 2 2 No Klebsiella pneumoniae JM45 2 2 No Klebsiella pneumoniae CG43 2 2 No Klebsiella pneumoniae KCTC 2242 1 1 No Klebsiella pneumoniae 342 2 2 No Klebsiella pneumoniae subsp. pneumoniae 1084 1 1 No Klebsiella pneumoniae subsp. pneumoniae HS11286 4 4 No Klebsiella pneumoniae subsp. pneumoniae MGH 78578 2 2 No Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 1 1 No Enterobacter aerogenes EA1509E 1 1 No Escherichia coli O104:H4 str. 2009EL-2050 1 1 No Escherichia coli O104:H4 str. 2009EL-2071 1 1 No Escherichia coli O104:H4 str. 2011C-3493 1 1 No Escherichia coli 042 1 1 No Escherichia coli UMNK88 2 2 No Escherichia coli ABU 83972 1 1 No Escherichia coli KO11FL 1 1 No Escherichia coli KO11FL 1 1 No Escherichia coli LF82 1 1 No Escherichia coli ED1a 1 1 No Escherichia coli 55989 1 1 No Escherichia coli W 1 1 No Escherichia coli W 1 1 No Escherichia coli APEC O1 2 2 No Escherichia coli HS 1 1 No Escherichia coli O26:H11 str. 11368 1 1 No Escherichia coli CFT073 1 1 No Enterobacter cloacae EcWSU1 1 1 No Enterobacter cloacae subsp. cloacae ENHKU01 1 1 No Enterobacter cloacae subsp. cloacae ATCC 13047 1 1 No Pseudomonas syringae pv. phaseolicola 1448A 1 1 No Pseudomonas stutzeri CCUG 29243 1 1 No Pseudomonas stutzeri DSM 4166 1 1 No Pseudomonas stutzeri RCH2 1 1 No Pseudomonas stutzeri ATCC 17588 = LMG 11199 1 1 No Pseudomonas monteilii SB3101 1 1 No Pseudomonas monteilii SB3078 1 1 No Pseudomonas putida NBRC 14164 2 2 No Pseudomonas putida S16 1 1 No Pseudomonas putida W619 1 1 No Pseudomonas putida GB-1 1 1 No Pseudomonas protegens CHA0 1 1 No Pseudomonas fluorescens Pf0-1 1 1 No Acinetobacter sp. SH024 1 1 No Acinetobacter lwoffii SH145 1 1 No Francisella tularensis subsp. holarctica F92 1 1 No Francisella tularensis subsp. holarctica FTNF002-00 1 1 No Francisella tularensis subsp. holarctica OSU18 1 1 No Francisella tularensis subsp. holarctica LVS 1 1 No Francisella tularensis subsp. holarctica FSC200 1 1 No Francisella tularensis subsp. tularensis TIGB03 1 1 No Francisella tularensis subsp. tularensis TI0902 1 1 No Francisella tularensis subsp. tularensis NE061598 1 1 No Francisella tularensis subsp. tularensis FSC198 1 1 No Francisella tularensis subsp. tularensis SCHU S4 1 1 No Francisella cf. novicida Fx1 1 1 No Candidatus Nitrososphaera gargensis Ga9.2 1 1 No Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 2 1 No Aeropyrum camini SY1 = JCM 12091 4 3 No Sulfolobus acidocaldarius SUSAZ 1 1 No Methanomethylovorans hollandica DSM 15978 3 3 No Methanolobus psychrophilus R15 2 2 No Methanosarcina mazei Tuc01 2 2 No Methanoregula formicica Methanoregula formicicum SMSP 1 1 No Archaeoglobus sulfaticallidus PM70-1 1 1 No Thermococcus sp. AM4 1 1 No Thermococcus sp. CL1 3 1 No Thermococcus litoralis DSM 5473 1 1 No Pyrococcus sp. NA2 1 1 No Pyrococcus furiosus DSM 3638 1 1 No Candidatus Methanomethylophilus alvus Mx1201 1 1 No Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1 1 No Halovivax ruber XH-70 4 4 No Natrinema pellirubrum DSM 15624 6 6 No Natronococcus occultus SP4 2 2 No Natronobacterium gregoryi SP2 7 5 No Haloquadratum walsbyi C23 2 2 No Halorhabdus tiamatea SARL4B 6 6 No Natronomonas moolapensis 8.8.11 4 4 No Haloarcula hispanica N601 4 4 No Methanococcus maripaludis C6 1 1 No Methanococcus maripaludis C7 1 1 No Homo sapiens 75_37 (old version GRC) Human 114 108 No Homo sapiens Human 39 37 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 33 31 No Heliconius numata 7 7 No Loa loa v3.3 (Request) Eye worm 11 10 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 13 13 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 7 5 No Moniliophthora perniciosa FA553 9 9 No Lotus japonicus 27 22 No Malus x domestica (Duplicate) Apple 36 34 No Ricinus communis Castor bean 17 15 No Nicotiana benthamiana 0.4.4 (Early draft) 35 33 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 19 17 No Solanum lycopersicum v2.3 (Early assembly) Tomato 22 18 No Phoenix dactylifera Date palm 16 13 No Vibrio campbellii ATCC BAA-1116 (Duplicate of NC) 3 3 No Homo sapiens 69_37 Human 23 21 No Pan troglodytes 69_2.1.4 Chimpanzee 27 25 No Gorilla gorilla 69_3.1 Western gorilla 29 27 No Pongo abelii 69_2 Sumatran orangutan 22 20 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 26 24 No Macaca mulatta 69_1 Rhesus monkey 29 27 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 33 30 No Otolemur garnettii 69_3 Small-eared galago 36 35 No Microcebus murinus 69_1 Gray mouse lemur 19 17 No Rattus norvegicus 69_3.4 Norway rat 33 33 No Mus musculus 69_38 House mouse 35 33 No Dipodomys ordii 69_1 Ord's kangaroo rat 26 24 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 35 32 No Cavia porcellus 69_3 Domestic guinea pig 21 19 No Oryctolagus cuniculus 69_2 Rabbit 31 29 No Ochotona princeps 69 American pika 18 17 No Tupaia belangeri 69 Northern tree shrew 23 20 No Sus scrofa 69_10.2 Pig 36 35 No Bos taurus 69_3.1 Cattle 32 31 No Vicugna pacos 69_1 Alpaca 19 18 No Tursiops truncatus 69_1 Bottlenose dolphin 18 17 No Mustela putorius furo 69_1.0 Domestic ferret 25 24 No Ailuropoda melanoleuca 69_1 Giant panda 27 25 No Canis familiaris 69_3.1 Dog 27 25 No Felis catus 69 Domestic cat 14 12 No Equus caballus 69_2 Horse 34 32 No Myotis lucifugus 69_2.0 Little brown bat 24 21 No Pteropus vampyrus 69_1 Large flying fox 20 18 No Sorex araneus 69_1 European shrew 14 14 No Erinaceus europaeus 69 Western European hedgehog 15 14 No Procavia capensis 69_1 Cape rock hyrax 12 11 No Loxodonta africana 69_3 African savanna elephant 28 25 No Echinops telfairi 69 Small Madagascar hedgehog 24 23 No Dasypus novemcinctus 69_2 Nine-banded armadillo 19 17 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 12 10 No Macropus eugenii 69_1.0 Tammar wallaby 23 21 No Sarcophilus harrisii 69_7.0 Tasmanian devil 25 22 No Monodelphis domestica 69_5 Gray short-tailed opossum 55 52 No Ornithorhynchus anatinus 69_5 Platypus 36 33 No Petromyzon marinus 69_7.0 Sea lamprey 16 16 No Meleagris gallopavo 69_2 Turkey 33 32 No Gallus gallus 69_2 Chicken 27 26 No Taeniopygia guttata 69_3.2.4 Zebra finch 25 25 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 29 28 No Anolis carolinensis 69_2.0 Green anole 31 30 No Xenopus tropicalis 69_4.2 Tropical clawed frog 37 35 No Latimeria chalumnae 69_1 Coelacanth 94 89 No Gadus morhua 69_1 Atlantic cod 34 32 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 44 42 No Takifugu rubripes 69_4 Torafugu 38 35 No Gasterosteus aculeatus 69_1 Three-spined stickleback 41 38 No Oryzias latipes 69_1 Japanese medaka 45 44 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 46 46 No Oreochromis niloticus 69_1.0 Nile tilapia 60 53 No Danio rerio 69_9 Zebrafish 59 56 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 24 20 No Ciona intestinalis 69 Vase tunicate 25 23 No Drosophila melanogaster 69_5 Fruit fly 13 12 No Caenorhabditis elegans 69_215 Roundworm 15 13 No Saccharomyces cerevisiae 69_4 Baker's yeast 6 5 No Arabidopsis thaliana 10 Thale cress 25 24 No 1_050719N (meta-genome) 21 21 No 1_Upper_euphotic (meta-genome) 1 1 No 2_050719S (meta-genome) 17 17 No 3_050719R (meta-genome) 9 9 No 4_050719Q (meta-genome) 30 30 No 4_Deep_abyss (meta-genome) 1 1 No 5_050719P (meta-genome) 23 23 No 5_Below_upper_mesopelagic (meta-genome) 2 1 No 6_Upper_euphotic (meta-genome) 3 3 No 7_Oxygen_minimum_layer (meta-genome) 2 2 No Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 3 3 No Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 10 9 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 2 2 No Atta cephalotes fungus garden (ACEF) (meta-genome) 7 7 No Bath Hot Springs, filamentous community (meta-genome) 12 12 No Bath Hot Springs, planktonic community (meta-genome) 28 28 No Combined (meta-genome) 9 9 No Core Eukaryotic Genes 458 (CEGMA) 4 3 No Cyphomyrmex longiscapus fungus garden (meta-genome) 9 9 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 5 5 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 6 6 No Dump bottom (Dump bottom) (meta-genome) 36 36 No Dump top (Dump top) (meta-genome) 40 40 No Endophytic microbiome from Rice (meta-genome) 5 5 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 5 5 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 2 2 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 2 2 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 7 7 No Fungus garden combined (combined) (meta-genome) 8 8 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 10 10 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 13 13 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 6 6 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 6 6 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 4 4 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 5 5 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 5 5 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 3 3 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 4 4 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 3 3 No Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 14 14 No Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 18 18 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 42 42 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 10 9 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 10 10 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 29 29 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 7 7 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 7 7 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 33 33 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome) 25 24 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 11 11 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome) 27 27 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 23 23 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 21 21 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 12 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 12 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome) 5 5 No Human Gut Community Subject 7 (meta-genome) 10 10 No Human Gut Community Subject 8 (meta-genome) 12 10 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 17 17 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 4 4 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 6 6 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 32 31 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 8 7 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 4 4 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 7 7 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 6 6 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 8 8 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 6 6 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 2 2 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 4 4 No Mouse Gut Community lean1 (meta-genome) 1 1 No NCBI 2017_08 genome 91115 87649 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 24 24 No Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 9 9 No Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome) 1 1 No Protozoadb 2010_08 (Protozoadb) 326 264 No simHC - Simulated High Complexity Metagenome (meta-genome) 26 26 No simLC - Simulated Low Complexity Metagenome (meta-genome) 12 12 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 9 9 No Sludge/Australian, Phrap Assembly (meta-genome) 3 3 No Sludge/US, Phrap Assembly (meta-genome) 2 2 No Soil microbial communities from Minnesota Farm (meta-genome) 13 13 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 31 31 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 27 27 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 15 15 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 19 19 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 18 18 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 16 16 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 17 17 No STRING v9.0.5 (STRING) 2838 2614 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 1 1 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 9 9 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 1 1 No Termite Protist Endosymbiont Community (meta-genome) 4 4 No Uniprot 2018_03 genome 45295 42225 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 18 18 No Global Ocean Sampling Expedition (GOS) 703 686 No NCBI plasmid sequences (Plasmids) 174 174 No NCBI viral sequences (Viral) 108 104 No PDB chains (SCOP 1.75 ) (PDB) 8 8 No Protein Data Bank (all PDB sequenc) 120 120 No SCOP2 SCOPe CATH ECOD (all domain sequ) 65 65 No TargetDB 75 69 No The Salmonella enterica Pan-genome (meta-genome) 8 8 No UniProt 112 109
