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  Home > Genomes > STRING v9.0.5 > Virus ectodomain domains


Virus ectodomain superfamily domain assignments
in
STRING v9.0.5

Network of domain occurrence in all genomes

Assignment details

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STRING v9.0.5 (STRING) has 40 significant domains in 40 proteins.

     

Sequence ID   Evalue   Region   Family  
10090.ENSMUSP00000112857   6.67e-28   424-525   Virus ectodomain  
10090.ENSMUSP00000112909   1.89e-27   422-524   Virus ectodomain  
10090.ENSMUSP00000122157   2.56e-26   488-565   Virus ectodomain  
10141.ENSCPOP00000017921   2.45e-26   42-119   Virus ectodomain  
13616.ENSMODP00000018011   4.73e-18   4-58   Virus ectodomain  
31033.ENSTRUP00000002734   3.45e-20   74-167   Virus ectodomain  
31033.ENSTRUP00000003176   0.00000000000000778   3-43   Virus ectodomain  
31033.ENSTRUP00000003191   3.28e-24   77-170   Virus ectodomain  
31033.ENSTRUP00000003351   0.00000000000000117   1-43   Virus ectodomain  
31033.ENSTRUP00000004368   2.67e-19   80-161   Virus ectodomain  
31033.ENSTRUP00000004759   7.23e-27   409-497   Virus ectodomain  
31033.ENSTRUP00000007686   1.95e-19   81-160   Virus ectodomain  
31033.ENSTRUP00000007998   1e-20   348-434   Virus ectodomain  
31033.ENSTRUP00000009474   8.34e-17   2-45   Virus ectodomain  
31033.ENSTRUP00000010446   4.17e-23   376-456   Virus ectodomain  
31033.ENSTRUP00000022393   1.61e-16   2-46   Virus ectodomain  
31033.ENSTRUP00000022719   0.00000000000000889   1-43   Virus ectodomain  
31033.ENSTRUP00000039886   8.89e-20   80-161   Virus ectodomain  
59729.ENSTGUP00000001130   2.33e-27   201-274   Virus ectodomain  
59729.ENSTGUP00000007783   1.61e-26   11-115   Virus ectodomain  
59729.ENSTGUP00000015071   0.00000000000741   2-43   Virus ectodomain  
7955.ENSDARP00000020392   1.83e-24   448-537   Virus ectodomain  
7955.ENSDARP00000101155   1.78e-24   436-525   Virus ectodomain  
8090.ENSORLP00000015026   0.000000000000122   1-44   Virus ectodomain  
8090.ENSORLP00000024313   9.45e-18   3-90   Virus ectodomain  
9031.ENSGALP00000010154   0.000000000528   14-54   Virus ectodomain  
9031.ENSGALP00000023033   1.17e-17   62-151   Virus ectodomain  
9031.ENSGALP00000036431   0.00000000000000889   354-442   Virus ectodomain  
9031.ENSGALP00000038020   1.11e-30   8-115   Virus ectodomain  
9544.ENSMMUP00000010430   0.0000000139   374-462   Virus ectodomain  
9544.ENSMMUP00000032629   4.06e-26   465-559   Virus ectodomain  
9544.ENSMMUP00000035333   1.5e-26   488-591   Virus ectodomain  
9598.ENSPTRP00000058789   8.34e-26   357-456   Virus ectodomain  
9598.ENSPTRP00000059300   1.33e-27   465-558   Virus ectodomain  
9600.ENSPPYP00000016504   0.0000000667   374-463   Virus ectodomain  
9600.ENSPPYP00000018153   9.78e-26   357-456   Virus ectodomain  
9606.ENSP00000391594   8.89e-26   488-591   Virus ectodomain  
9606.ENSP00000419945   1.89e-28   320-422   Virus ectodomain  
9606.ENSP00000420174   8.34e-26   357-456   Virus ectodomain  
9823.ENSSSCP00000017796   4.34e-20   79-172   Virus ectodomain  
 
Weak hits:
10090.ENSMUSP00000023759   0.0222   411-464   Virus ectodomain  
10116.ENSRNOP00000011056   0.0378   147-263   Virus ectodomain  
10116.ENSRNOP00000029554   0.0956   394-423   Virus ectodomain  
10116.ENSRNOP00000043205   0.0222   411-464   Virus ectodomain  
10141.ENSCPOP00000000367   0.0222   411-464   Virus ectodomain  
10141.ENSCPOP00000002010   0.0163   140-195   Virus ectodomain  
10141.ENSCPOP00000017221   0.0889   323-395   Virus ectodomain  
1148.sll1272   0.023   4-50   Virus ectodomain  
121224.XP_002428516   0.0556   676-737   Virus ectodomain  
121224.XP_002431366   0.0296   386-438   Virus ectodomain  
126740.TRQ2_1122   0.00511   31-75   Virus ectodomain  
148305.A4QQM2   0.06   17-53   Virus ectodomain  
150340.VEA_003125   0.0445   240-275   Virus ectodomain  
160490.SPy_0977   0.00252   25-63   Virus ectodomain  
164546.RALTA_A1703   0.0578   32-91   Virus ectodomain  
176299.Atu0119   0.0645   10-49   Virus ectodomain  
177437.HRM2_11380   0.000964   64-111   Virus ectodomain  
186103.spyM18_1273   0.00252   25-63   Virus ectodomain  
186497.PF0900   0.0445   220-272   Virus ectodomain  
187272.Mlg_2267   0.0845   29-66   Virus ectodomain  
196164.CE2672   0.0333   5-39   Virus ectodomain  
203267.TWT041   0.0889   16-61   Virus ectodomain  
223926.VP1918   0.00778   240-274   Virus ectodomain  
233413.Mb0761   0.0734   12-48   Virus ectodomain  
235909.GK0901   0.0422   14-53   Virus ectodomain  
243161.TC0500   0.08   9-68   Virus ectodomain  
243274.TM1712   0.00511   31-75   Virus ectodomain  
246197.MXAN_1672   0.017   120-171   Virus ectodomain  
262543.Exig_0259   0.0356   10-48   Virus ectodomain  
266264.Rmet_1647   0.1   34-76   Virus ectodomain  
269797.Mbar_A3487   0.00189   133-193   Virus ectodomain  
269798.CHU_1177   0.0495   107-137   Virus ectodomain  
272624.lpg2584   0.0756   782-824   Virus ectodomain  
28377.ENSACAP00000003247   0.0608   112-168   Virus ectodomain  
28377.ENSACAP00000016784   0.0141   352-405   Virus ectodomain  
28985.Q6CYH2   0.0845   146-212   Virus ectodomain  
294381.B1N469   0.0867   43-104   Virus ectodomain  
294381.B1N4E4   0.0756   43-104   Virus ectodomain  
294381.B1N4J3   0.0856   44-105   Virus ectodomain  
294381.B1N4U0   0.0867   43-104   Virus ectodomain  
294381.B1N4Z6   0.0745   43-104   Virus ectodomain  
294381.C4M9A1   0.0934   43-104   Virus ectodomain  
294381.C4MBC8   0.0934   43-104   Virus ectodomain  
294381.C4MBL5   0.09   43-104   Virus ectodomain  
297245.lpl2507   0.0711   782-824   Virus ectodomain  
297246.lpp2637   0.0756   782-824   Virus ectodomain  
3055.JGI175502   0.0689   89-133   Virus ectodomain  
3055.JGI282292   0.0445   63-111   Virus ectodomain  
3055.JGI284941   0.0534   63-109   Virus ectodomain  
3055.JGI289388   0.0978   32-84   Virus ectodomain  
3055.JGI322217   0.0205   11-59   Virus ectodomain  
3055.JGI337577   0.0311   49-99   Virus ectodomain  
3055.JGI416295   0.0934   3-43   Virus ectodomain  
3055.JGI420726   0.0022   64-132   Virus ectodomain  
31033.ENSTRUP00000047105   0.0341   410-463   Virus ectodomain  
311402.Avi_0309   0.06   15-53   Virus ectodomain  
31234.CRE17347   0.0356   98-127   Virus ectodomain  
319224.Sputcn32_0779   0.0489   176-233   Virus ectodomain  
3218.JGI78308   0.0989   182-205   Virus ectodomain  
321956.LBUL_1472   0.0923   71-105   Virus ectodomain  
324831.LGAS_0861   0.0111   110-190   Virus ectodomain  
326423.RBAM_036540   0.00378   38-80   Virus ectodomain  
329726.AM1_3774   0.0147   4-58   Virus ectodomain  
329726.AM1_B0221   0.0206   40-79   Virus ectodomain  
329726.AM1_E0149   0.0233   40-79   Virus ectodomain  
329726.AM1_G0133   0.0612   45-86   Virus ectodomain  
336982.TBFG_10754   0.0389   38-75   Virus ectodomain  
340102.Pars_0296   0.0422   64-108   Virus ectodomain  
340177.Cag_1179   0.0667   382-412   Virus ectodomain  
340322.cgR_1876   0.00319   7-46   Virus ectodomain  
349161.Dred_2591   0.0845   3-59   Virus ectodomain  
350058.Mvan_3259   0.0867   6-40   Virus ectodomain  
350058.Mvan_3737   0.0222   24-64   Virus ectodomain  
35128.JGI23697   0.00615   1610-1666   Virus ectodomain  
351745.Sputw3181_3396   0.0489   176-233   Virus ectodomain  
360109.JJD26997_0799   0.0578   16-51   Virus ectodomain  
379066.GAU_2299   0.00845   225-299   Virus ectodomain  
381754.PSPA7_2378   0.0778   164-198   Virus ectodomain  
390333.Ldb1592   0.0923   71-105   Virus ectodomain  
390874.Tpet_1008   0.00222   31-75   Virus ectodomain  
395962.Cyan8802_3212   0.0156   143-177   Virus ectodomain  
39946.BGIOSIBCE009379   0.0341   606-646   Virus ectodomain  
39947.LOC_Os03g02260.1   0.0341   606-646   Virus ectodomain  
400667.A1S_0264   0.0245   107-156   Virus ectodomain  
400673.LPC_0561   0.0756   782-824   Virus ectodomain  
405416.ACICU_00286   0.0311   129-181   Virus ectodomain  
410289.BCG_0790   0.0734   12-48   Virus ectodomain  
41431.PCC8801_2884   0.0156   143-177   Virus ectodomain  
419665.Maeo_0551   0.00245   4-53   Virus ectodomain  
419947.MRA_0749   0.0734   12-48   Virus ectodomain  
420246.GTNG_1306   0.0511   32-100   Virus ectodomain  
420246.GTNG_1533   0.0478   19-55   Virus ectodomain  
425104.Ssed_0556   0.0741   43-61,110-127   Virus ectodomain  
439375.Oant_3243   0.0267   31-76   Virus ectodomain  
43989.cce_1414   0.0172   33-75   Virus ectodomain  
449447.MAE_05630   0.0208   145-178   Virus ectodomain  
4558.Sb02g039480.1   0.0482   66-108   Virus ectodomain  
471223.GWCH70_1700   0.0334   14-53   Virus ectodomain  
471853.Bcav_3198   0.00267   186-247   Virus ectodomain  
471854.Dfer_2538   0.0329   679-733   Virus ectodomain  
478434.TBMG_00754   0.0389   38-75   Virus ectodomain  
479433.Caci_1066   0.0867   9-41   Virus ectodomain  
479434.Sthe_0568   0.000222   12-76   Virus ectodomain  
480119.AB57_0352   0.0319   129-181   Virus ectodomain  
485916.Dtox_3053   0.0304   8-73   Virus ectodomain  
487214.SPH_1252   0.00411   28-63   Virus ectodomain  
491915.Aflv_1217   0.0322   15-53   Virus ectodomain  
502025.Hoch_0301   0.0104   107-165   Virus ectodomain  
5057.CADACLAP00000575   0.0296   205-257   Virus ectodomain  
5059.CADAFLAP00007451   0.0545   93-154   Virus ectodomain  
509170.ABSDF3264   0.0326   129-181   Virus ectodomain  
509173.ABAYE3506   0.0319   129-181   Virus ectodomain  
515619.EUBREC_0721   0.0711   8-71   Virus ectodomain  
516950.SPCG_1304   0.00411   28-63   Virus ectodomain  
525898.Sdel_0025   0.0934   100-156   Virus ectodomain  
544556.GYMC61_1688   0.0334   14-53   Virus ectodomain  
557600.ABBFA_003269   0.0319   129-181   Virus ectodomain  
561007.MAB_p12   0.00245   19-59   Virus ectodomain  
561275.JTY_0760   0.0734   12-48   Virus ectodomain  
561276.SPN23F_12770   0.0311   28-65   Virus ectodomain  
5722.A2DE92   0.0311   658-694   Virus ectodomain  
5722.A2DZ65   0.0711   180-255   Virus ectodomain  
5722.A2E4K7   0.0142   38-97   Virus ectodomain  
5722.A2FBM2   0.0934   670-708   Virus ectodomain  
5722.A2GB97   0.0422   69-143   Virus ectodomain  
5833.PFD0300w-1   0.0623   103-172   Virus ectodomain  
590168.Tnap_1094   0.00222   31-75   Virus ectodomain  
5911.XP_001017828   0.00326   619-671   Virus ectodomain  
59729.ENSTGUP00000000627   0.00734   116-171   Virus ectodomain  
59729.ENSTGUP00000002497   0.0589   625-698   Virus ectodomain  
59729.ENSTGUP00000003735   0.0148   374-427   Virus ectodomain  
59729.ENSTGUP00000010520   0.0182   213-260   Virus ectodomain  
59729.ENSTGUP00000017105   0.0267   18-79   Virus ectodomain  
59922.P9303_21921   0.017   33-97   Virus ectodomain  
59922.P9303_26741   0.0104   67-131   Virus ectodomain  
6182.Q5BWS7   0.0489   56-90   Virus ectodomain  
6239.K07A1.8.1   0.0912   309-404   Virus ectodomain  
644223.PAS_chr2-1_0131   0.00467   74-107   Virus ectodomain  
665079.A7EIT8   0.0637   22-53   Virus ectodomain  
69293.ENSGACP00000007600   0.0356   411-464   Virus ectodomain  
69293.ENSGACP00000023394   0.0823   27-72   Virus ectodomain  
6945.ISCW005839-PA   0.0978   429-494   Virus ectodomain  
6945.ISCW007514-PA   0.0119   158-215   Virus ectodomain  
6945.ISCW009439-PA   0.00889   136-178   Virus ectodomain  
6945.ISCW019453-PA   0.00193   299-353   Virus ectodomain  
7070.XP_973110   0.0489   673-736   Virus ectodomain  
7159.AAEL008099-PA   0.0478   603-669   Virus ectodomain  
7176.CPIJ008586-PA   0.0187   254-317   Virus ectodomain  
7176.CPIJ017691-PA   0.00689   132-195   Virus ectodomain  
7237.FBpp0287305   0.0989   65-106   Virus ectodomain  
7244.FBpp0226856   0.0674   33-80   Virus ectodomain  
7260.FBpp0247328   0.000334   64-109   Virus ectodomain  
73239.Q7RQE3   0.0682   299-355   Virus ectodomain  
7425.XP_001601313   0.0126   396-448   Virus ectodomain  
7668.XP_001178349   0.0348   367-421   Virus ectodomain  
7668.XP_001190973   0.0319   343-397   Virus ectodomain  
7668.XP_782297   0.0356   380-434   Virus ectodomain  
7739.JGI83434   0.0267   82-134   Virus ectodomain  
7955.ENSDARP00000009407   0.0334   406-459   Virus ectodomain  
7955.ENSDARP00000058354   0.06   317-377   Virus ectodomain  
7955.ENSDARP00000060852   0.00834   16-62   Virus ectodomain  
7955.ENSDARP00000102735   0.0222   67-127   Virus ectodomain  
8090.ENSORLP00000008632   0.0356   432-485   Virus ectodomain  
81824.JGI7421   0.00111   322-366   Virus ectodomain  
83331.MT0765   0.00534   37-76   Virus ectodomain  
83332.Rv0740   0.0734   12-48   Virus ectodomain  
8364.ENSXETP00000026405   0.00801   9-61   Virus ectodomain  
8364.ENSXETP00000029303   0.04   410-463   Virus ectodomain  
8364.ENSXETP00000031141   0.04   375-429   Virus ectodomain  
9031.ENSGALP00000005900   0.00608   110-166   Virus ectodomain  
9031.ENSGALP00000010010   0.0163   412-465   Virus ectodomain  
9031.ENSGALP00000023357   0.04   253-308   Virus ectodomain  
9258.ENSOANP00000008052   0.0348   141-197   Virus ectodomain  
9544.ENSMMUP00000008602   0.0222   411-464   Virus ectodomain  
9544.ENSMMUP00000040029   0.0162   282-341   Virus ectodomain  
9598.ENSPTRP00000008410   0.0222   411-464   Virus ectodomain  
9600.ENSPPYP00000005143   0.02   372-425   Virus ectodomain  
9606.ENSP00000378414   0.0222   411-464   Virus ectodomain  
9615.ENSCAFP00000012210   0.0222   407-460   Virus ectodomain  
9615.ENSCAFP00000022696   0.0956   163-244   Virus ectodomain  
9615.ENSCAFP00000025563   0.0437   141-195   Virus ectodomain  
9685.ENSFCAP00000008775   0.0185   352-405   Virus ectodomain  
9685.ENSFCAP00000012423   0.0211   3-29   Virus ectodomain  
9796.ENSECAP00000019574   0.0185   352-405   Virus ectodomain  
9823.ENSSSCP00000000227   0.0222   412-465   Virus ectodomain  
9913.ENSBTAP00000001284   0.0222   417-470   Virus ectodomain  
9913.ENSBTAP00000008528   0.0178   178-259   Virus ectodomain  
9913.ENSBTAP00000013678   0.0415   140-195   Virus ectodomain  
9913.ENSBTAP00000015113   0.1   371-419,450-480   Virus ectodomain  
9913.ENSBTAP00000047714   0.0356   363-430   Virus ectodomain  
9913.ENSBTAP00000048212   0.00689   383-449   Virus ectodomain  
9913.ENSBTAP00000048933   0.0111   372-427   Virus ectodomain  
9913.ENSBTAP00000050214   0.0511   380-446   Virus ectodomain  
9913.ENSBTAP00000052602   0.00333   44-107   Virus ectodomain  
9986.ENSOCUP00000013505   0.0222   411-464   Virus ectodomain  
99883.ENSTNIP00000021429   0.0348   417-470   Virus ectodomain  

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View all assignments containing a Virus ectodomain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   129255 129255
No Yes Homo sapiens 76_38 Human 9 9
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 5 5
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Sus scrofa 76_10.2 Pig 15 15
No Yes Ovis aries 76_3.1 Sheep 30 30
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 6
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 19 19
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 99 99
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 25 25
No Yes Meleagris gallopavo 76_2 Turkey 3 3
No Yes Anas platyrhynchos 76_1.0 Mallard 4 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 18 18
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Takifugu rubripes 76_4 Torafugu 13 13
No Yes Oryzias latipes 76_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 2 2
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Trypanosoma congolense 2.4   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 10 10
No Yes Homo sapiens (NCBI version) Human 8 8
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 5 5
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Homo sapiens 69_37 Human 4 4
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Mus musculus 69_38 House mouse 5 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Sus scrofa 69_10.2 Pig 14 14
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 6
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 25 25
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 4 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 3 3
No Yes Anolis carolinensis 69_2.0 Green anole 8 8
No Yes Takifugu rubripes 69_4 Torafugu 13 13
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1176 1167
No Yes STRING v9.0.5 (STRING)   40 40
No Yes Uniprot 2018_03 genome   96739 95383
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI viral sequences (Viral)   87 80
No Yes PDB chains (SCOP 1.75) (PDB)   36 36
No Yes Protein Data Bank (all PDB sequenc)   872 708
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   740 649
No Yes TargetDB (Targets)   2 2
No Yes UniProt viral sequences (Viral)   29028 28845

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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