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  Home > Genomes > Protein Data Bank > Clostridium neurotoxins, "coiled-coil" domain domains


Clostridium neurotoxins, "coiled-coil" domain superfamily domain assignments
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Protein Data Bank

Network of domain occurrence in all genomes

Assignment details

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Protein Data Bank (all PDB sequenc) has 48 significant domains in 48 proteins.

     

Sequence ID   Evalue   Region   Family  
1epw_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1f31_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1g9a_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1g9b_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1g9c_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1g9d_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1i1e_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0b_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0c_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0d_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0e_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0f_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
1s0g_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
2np0_A   3.81e-126   535-860   Clostridium neurotoxins, "coiled-coil" domain  
2nyy_A   1.17e-123   548-873   Clostridium neurotoxins, "coiled-coil" domain  
2nz9_A   1.17e-123   548-873   Clostridium neurotoxins, "coiled-coil" domain  
2nz9_B   1.17e-123   548-873   Clostridium neurotoxins, "coiled-coil" domain  
2w2d_B   8.05e-125   103-428   Clostridium neurotoxins, "coiled-coil" domain  
2w2d_D   8.05e-125   103-428   Clostridium neurotoxins, "coiled-coil" domain  
2xhl_B   1.1e-126   98-419   Clostridium neurotoxins, "coiled-coil" domain  
3bta_A   1.17e-123   548-873   Clostridium neurotoxins, "coiled-coil" domain  
3ffz_A   8.78e-128   518-848   Clostridium neurotoxins, "coiled-coil" domain  
3ffz_B   8.78e-128   518-848   Clostridium neurotoxins, "coiled-coil" domain  
3v0a_A   1.17e-123   549-874   Clostridium neurotoxins, "coiled-coil" domain  
3v0a_B   1.46e-119   500-832   Clostridium neurotoxins, "coiled-coil" domain  
3v0b_A   1.17e-123   549-874   Clostridium neurotoxins, "coiled-coil" domain  
3v0b_B   1.46e-119   500-832   Clostridium neurotoxins, "coiled-coil" domain  
3v0c_A   1.24e-123   549-874   Clostridium neurotoxins, "coiled-coil" domain  
3vuo_A   5.56e-112   499-828   Clostridium neurotoxins, "coiled-coil" domain  
3zuq_A   7.32e-126   571-892   Clostridium neurotoxins, "coiled-coil" domain  
3zur_A   4.39e-123   631-951   Clostridium neurotoxins, "coiled-coil" domain  
3zur_B   4.39e-123   631-951   Clostridium neurotoxins, "coiled-coil" domain  
3zus_A   4.03e-123   598-918   Clostridium neurotoxins, "coiled-coil" domain  
3zus_B   4.03e-123   598-918   Clostridium neurotoxins, "coiled-coil" domain  
3zus_C   4.03e-123   598-918   Clostridium neurotoxins, "coiled-coil" domain  
3zus_D   4.03e-123   598-918   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_A   3.66e-128   518-848   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_B   6.81e-118   465-795   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_C   3.66e-128   518-848   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_D   6.81e-118   465-795   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_E   3.66e-128   518-848   Clostridium neurotoxins, "coiled-coil" domain  
4zkt_F   6.81e-118   465-795   Clostridium neurotoxins, "coiled-coil" domain  
5bqm_B   3.15e-118   154-474   Clostridium neurotoxins, "coiled-coil" domain  
5bqm_D   3.15e-118   154-474   Clostridium neurotoxins, "coiled-coil" domain  
5bqn_A   6.3e-118   551-872   Clostridium neurotoxins, "coiled-coil" domain  
5n0b_A   2.71e-116   579-904   Clostridium neurotoxins, "coiled-coil" domain  
5n0c_A   2.71e-116   579-904   Clostridium neurotoxins, "coiled-coil" domain  
5n0c_B   2.71e-116   579-904   Clostridium neurotoxins, "coiled-coil" domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   905 905
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   2 2
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum BKT015925   2 2
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   2 2
No Yes Clostridium botulinum Ba4 str. 657   4 4
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   2 2
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   385 385
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   23 23
No Yes Uniprot 2018_03 genome   312 312
No Yes Global Ocean Sampling Expedition (GOS)   5 5
No Yes NCBI plasmid sequences (Plasmids)   16 16
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   48 48
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   65 65
No Yes UniProt viral sequences (Viral)   7 7

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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