Intermediate filament protein, coiled coil region superfamily domain assignments in Homo sapiens

Intermediate filament protein, coiled coil region superfamily domain assignments
in
Homo sapiens

Assignment details

Click on a sequence ID to see the domain architecture and all domain assignment details for that sequence.
The 'Alignments' button links to the alignment between the sequences on this page and a model.
The 'View' button links to a comparison of the domain architectures of all sequences on this page.
The 'Domain Combinations' button links to all of the domain architectures containing this domain in this genome.
The table is sorted on sequence ID then evalue.
Large tables are split into pages containing 3000 sequences each. The 3000 sequences will contain both strong and weak hits.
Only 25 genomes are shown for large groups of genomes.

Homo sapiens (NCBI version) has 185 significant domains in 86 proteins.

Sequence ID	Evalue	Region	Family
gi\|10337581\|ref\|NP_002270.1\|	4.36e-22	295-365	Intermediate filament protein, coiled coil region
	0.0000000199	54-86	Intermediate filament protein, coiled coil region
gi\|105990539\|ref\|NP_006149.2\|	1.74e-23	318-395	Intermediate filament protein, coiled coil region
	0.0000000000204	89-122	Intermediate filament protein, coiled coil region
gi\|109148552\|ref\|NP_476429.2\|	1.92e-23	431-508	Intermediate filament protein, coiled coil region
	0.0000000000167	197-231	Intermediate filament protein, coiled coil region
	0.000000492	243-309	Intermediate filament protein, coiled coil region
gi\|112382237\|ref\|NP_663780.2\|	0.0000000000000126	244-317	Intermediate filament protein, coiled coil region
	0.0000371	10-43	Intermediate filament protein, coiled coil region
gi\|112382239\|ref\|NP_056101.5\|	0.00000000000000942	244-317	Intermediate filament protein, coiled coil region
	0.0000282	10-43	Intermediate filament protein, coiled coil region
gi\|114431246\|ref\|NP_853513.2\|	6.28e-21	318-396	Intermediate filament protein, coiled coil region
	0.00000000523	84-118	Intermediate filament protein, coiled coil region
gi\|116488398\|ref\|NP_002269.3\|	2.96e-22	334-405	Intermediate filament protein, coiled coil region
	0.00000000575	94-129	Intermediate filament protein, coiled coil region
gi\|119395750\|ref\|NP_006112.3\|	3.66e-22	411-488	Intermediate filament protein, coiled coil region
	0.0000000000497	178-213	Intermediate filament protein, coiled coil region
	0.000000167	223-293	Intermediate filament protein, coiled coil region
gi\|119395754\|ref\|NP_000415.2\|	3.31e-24	399-476	Intermediate filament protein, coiled coil region
	0.0000000000445	167-201	Intermediate filament protein, coiled coil region
	0.000000012	206-277	Intermediate filament protein, coiled coil region
gi\|119703753\|ref\|NP_005546.2\|	1.13e-23	394-471	Intermediate filament protein, coiled coil region
	0.0000000000429	162-196	Intermediate filament protein, coiled coil region
	0.00000000173	201-272	Intermediate filament protein, coiled coil region
gi\|125490370\|ref\|NP_872303.2\|	1.55e-21	327-399	Intermediate filament protein, coiled coil region
	0.00000000256	87-122	Intermediate filament protein, coiled coil region
gi\|125628632\|ref\|NP_001074961.1\|	1.13e-20	315-389	Intermediate filament protein, coiled coil region
	0.0000000146	81-116	Intermediate filament protein, coiled coil region
	0.00068	119-193	Intermediate filament protein, coiled coil region
gi\|125628636\|ref\|NP_872313.2\|	1.26e-20	315-389	Intermediate filament protein, coiled coil region
	0.0000000162	81-116	Intermediate filament protein, coiled coil region
	0.000785	119-193	Intermediate filament protein, coiled coil region
gi\|131412225\|ref\|NP_705694.2\|	2.62e-25	333-411	Intermediate filament protein, coiled coil region
	0.00000000214	102-136	Intermediate filament protein, coiled coil region
gi\|131412228\|ref\|NP_002265.2\|	2.27e-25	333-411	Intermediate filament protein, coiled coil region
	0.00000000188	102-136	Intermediate filament protein, coiled coil region
gi\|14249342\|ref\|NP_116116.1\|	4.53e-25	324-402	Intermediate filament protein, coiled coil region
	0.0000000000134	92-128	Intermediate filament protein, coiled coil region
gi\|14318422\|ref\|NP_002275.1\|	6.63e-21	335-412	Intermediate filament protein, coiled coil region
	0.0000000000309	105-139	Intermediate filament protein, coiled coil region
	0.000523	143-213	Intermediate filament protein, coiled coil region
gi\|148277620\|ref\|NP_998821.3\|	1.69e-19	324-401	Intermediate filament protein, coiled coil region
	0.0000000146	94-129	Intermediate filament protein, coiled coil region
gi\|148612803\|ref\|NP_778223.2\|	1.6e-23	370-448	Intermediate filament protein, coiled coil region
	0.0000000000272	139-173	Intermediate filament protein, coiled coil region
	0.000000251	180-248	Intermediate filament protein, coiled coil region
gi\|14917115\|ref\|NP_002268.2\|	3.31e-22	294-365	Intermediate filament protein, coiled coil region
	0.0000000209	54-86	Intermediate filament protein, coiled coil region
gi\|14917117\|ref\|NP_004129.2\|	2.79e-22	294-365	Intermediate filament protein, coiled coil region
	0.0000000199	54-86	Intermediate filament protein, coiled coil region
gi\|14917119\|ref\|NP_066293.2\|	4.01e-22	336-407	Intermediate filament protein, coiled coil region
	0.0000000209	96-128	Intermediate filament protein, coiled coil region
gi\|153791158\|ref\|NP_004684.2\|	1.74e-24	380-457	Intermediate filament protein, coiled coil region
	0.0000000000209	148-182	Intermediate filament protein, coiled coil region
	0.0000000157	187-258	Intermediate filament protein, coiled coil region
gi\|153791670\|ref\|NP_056932.2\|	1.71e-23	414-491	Intermediate filament protein, coiled coil region
	0.0000000000146	182-216	Intermediate filament protein, coiled coil region
	0.00000183	226-289	Intermediate filament protein, coiled coil region
gi\|153945736\|ref\|NP_853515.2\|	1.17e-20	316-394	Intermediate filament protein, coiled coil region
	0.00000000785	82-116	Intermediate filament protein, coiled coil region
	0.0994	276-330	Intermediate filament protein, coiled coil region
gi\|15431310\|ref\|NP_000517.2\|	8.37e-26	343-421	Intermediate filament protein, coiled coil region
	0.00000000413	114-147	Intermediate filament protein, coiled coil region
	0.0246	188-226	Intermediate filament protein, coiled coil region
gi\|15431316\|ref\|NP_149034.2\|	1.92e-22	394-471	Intermediate filament protein, coiled coil region
	0.000000000011	164-198	Intermediate filament protein, coiled coil region
	0.000439	200-272	Intermediate filament protein, coiled coil region
gi\|15431318\|ref\|NP_006762.3\|	2.44e-22	343-413	Intermediate filament protein, coiled coil region
	0.00000000152	102-135	Intermediate filament protein, coiled coil region
gi\|155969697\|ref\|NP_775109.2\|	8.72e-24	394-471	Intermediate filament protein, coiled coil region
	0.0000000000429	162-196	Intermediate filament protein, coiled coil region
	0.00000000256	201-272	Intermediate filament protein, coiled coil region
gi\|15618995\|ref\|NP_258259.1\|	1.67e-21	361-437	Intermediate filament protein, coiled coil region
	0.0000000000277	129-163	Intermediate filament protein, coiled coil region
	0.0000000251	170-239	Intermediate filament protein, coiled coil region
gi\|157738641\|ref\|NP_001099011.1\|	0.00000000000000663	1-34	Intermediate filament protein, coiled coil region
gi\|157738649\|ref\|NP_005373.2\|	2.79e-25	329-407	Intermediate filament protein, coiled coil region
	0.00000000000183	99-135	Intermediate filament protein, coiled coil region
gi\|169790841\|ref\|NP_002273.3\|	6.8e-21	340-417	Intermediate filament protein, coiled coil region
	0.0000000000319	110-144	Intermediate filament protein, coiled coil region
	0.000994	148-218	Intermediate filament protein, coiled coil region
gi\|169790853\|ref\|NP_002272.2\|	7.15e-21	335-412	Intermediate filament protein, coiled coil region
	0.000000000033	105-139	Intermediate filament protein, coiled coil region
	0.000575	143-213	Intermediate filament protein, coiled coil region
gi\|192807292\|ref\|NP_061889.2\|	5.93e-22	373-451	Intermediate filament protein, coiled coil region
	0.00000000204	138-173	Intermediate filament protein, coiled coil region
gi\|194018511\|ref\|NP_778253.2\|	8.02e-19	395-472	Intermediate filament protein, coiled coil region
	0.000000000115	163-197	Intermediate filament protein, coiled coil region
	0.000408	208-273	Intermediate filament protein, coiled coil region
gi\|195972866\|ref\|NP_000412.3\|	4.71e-24	377-455	Intermediate filament protein, coiled coil region
	0.00000000194	144-179	Intermediate filament protein, coiled coil region
gi\|196115290\|ref\|NP_001124491.1\|	2.09e-23	294-372	Intermediate filament protein, coiled coil region
	0.00000000000033	68-104	Intermediate filament protein, coiled coil region
gi\|210147457\|ref\|NP_001129737.1\|	0.000000000000366	412-480	Intermediate filament protein, coiled coil region
	0.000628	57-87	Intermediate filament protein, coiled coil region
gi\|21264345\|ref\|NP_006253.2\|	3.31e-23	324-402	Intermediate filament protein, coiled coil region
	0.000000000000502	95-131	Intermediate filament protein, coiled coil region
gi\|226246663\|ref\|NP_001139697.1\|	3.66e-21	356-432	Intermediate filament protein, coiled coil region
	0.0000000000298	124-158	Intermediate filament protein, coiled coil region
	0.00000209	165-234	Intermediate filament protein, coiled coil region
gi\|226246665\|ref\|NP_001139698.1\|	4.01e-21	324-395	Intermediate filament protein, coiled coil region
	0.0000000000256	124-158	Intermediate filament protein, coiled coil region
	0.00000183	165-234	Intermediate filament protein, coiled coil region
gi\|22748757\|ref\|NP_689562.1\|	7.32e-20	67-144	Intermediate filament protein, coiled coil region
gi\|24234699\|ref\|NP_002267.2\|	2.44e-24	308-386	Intermediate filament protein, coiled coil region
	0.0000000022	78-112	Intermediate filament protein, coiled coil region
gi\|24430190\|ref\|NP_002266.2\|	2.62e-25	334-412	Intermediate filament protein, coiled coil region
	0.00000000183	103-137	Intermediate filament protein, coiled coil region
gi\|24430192\|ref\|NP_005548.2\|	1.73e-26	345-423	Intermediate filament protein, coiled coil region
	0.00000000413	116-149	Intermediate filament protein, coiled coil region
gi\|254675185\|ref\|NP_853517.2\|	2.09e-20	315-393	Intermediate filament protein, coiled coil region
	0.0000000214	81-115	Intermediate filament protein, coiled coil region
gi\|27436946\|ref\|NP_733821.1\|	4.36e-18	306-382	Intermediate filament protein, coiled coil region
	0.0000000628	30-62	Intermediate filament protein, coiled coil region
gi\|27436948\|ref\|NP_733822.1\|	4.19e-18	306-382	Intermediate filament protein, coiled coil region
	0.0000000575	30-62	Intermediate filament protein, coiled coil region
gi\|27436951\|ref\|NP_116126.2\|	1.29e-18	301-377	Intermediate filament protein, coiled coil region
	0.000000022	25-58	Intermediate filament protein, coiled coil region
gi\|27477127\|ref\|NP_149022.3\|	6.98e-22	349-426	Intermediate filament protein, coiled coil region
	0.0000000000785	119-153	Intermediate filament protein, coiled coil region
	0.0000162	156-227	Intermediate filament protein, coiled coil region
gi\|27894337\|ref\|NP_061883.1\|	4.53e-24	298-376	Intermediate filament protein, coiled coil region
	0.000000000115	68-104	Intermediate filament protein, coiled coil region
gi\|27894339\|ref\|NP_056330.3\|	2.44e-23	299-377	Intermediate filament protein, coiled coil region
	0.00000000471	70-103	Intermediate filament protein, coiled coil region
gi\|28173564\|ref\|NP_778238.1\|	1.03e-23	363-440	Intermediate filament protein, coiled coil region
	0.0000000000575	131-165	Intermediate filament protein, coiled coil region
	0.000000105	172-241	Intermediate filament protein, coiled coil region
gi\|28372503\|ref\|NP_542785.1\|	3.66e-21	356-432	Intermediate filament protein, coiled coil region
	0.0000000000298	124-158	Intermediate filament protein, coiled coil region
	0.00000209	165-234	Intermediate filament protein, coiled coil region
gi\|301500709\|ref\|NP_001180386.1\|	0.000000000000698	465-533	Intermediate filament protein, coiled coil region
	0.00167	77-107	Intermediate filament protein, coiled coil region
gi\|302148456\|ref\|NP_542768.2\|	0.00000000000068	456-524	Intermediate filament protein, coiled coil region
	0.00162	77-107	Intermediate filament protein, coiled coil region
gi\|310689049\|ref\|NP_001185486.1\|	2.79e-17	110-177	Intermediate filament protein, coiled coil region
gi\|31559829\|ref\|NP_853512.1\|	2.79e-20	311-389	Intermediate filament protein, coiled coil region
	0.0000000288	77-111	Intermediate filament protein, coiled coil region
gi\|32483416\|ref\|NP_066554.2\|	2.09e-23	331-408	Intermediate filament protein, coiled coil region
	0.00000000068	96-129	Intermediate filament protein, coiled coil region
gi\|32567786\|ref\|NP_787028.1\|	8.37e-21	385-456	Intermediate filament protein, coiled coil region
	0.0000000000194	141-175	Intermediate filament protein, coiled coil region
	0.000000282	183-253	Intermediate filament protein, coiled coil region
gi\|331999954\|ref\|NP_002263.3\|	6.28e-22	368-445	Intermediate filament protein, coiled coil region
	0.000000000188	136-170	Intermediate filament protein, coiled coil region
	0.00000267	176-246	Intermediate filament protein, coiled coil region
gi\|334688844\|ref\|NP_001229305.1\|	2.09e-23	294-372	Intermediate filament protein, coiled coil region
	0.000000000000335	68-104	Intermediate filament protein, coiled coil region
	0.022	121-174	Intermediate filament protein, coiled coil region
gi\|341916344\|ref\|XP_003403930.1\|	4.01e-22	336-407	Intermediate filament protein, coiled coil region
	0.0000000209	96-128	Intermediate filament protein, coiled coil region
gi\|38176300\|ref\|NP_006608.1\|	0.00000000453	241-312	Intermediate filament protein, coiled coil region
	0.0000889	7-41	Intermediate filament protein, coiled coil region
gi\|40354195\|ref\|NP_954657.1\|	2.27e-22	308-385	Intermediate filament protein, coiled coil region
	0.000000000785	78-113	Intermediate filament protein, coiled coil region
gi\|4502995\|ref\|NP_003562.1\|	0.00000000000000314	344-414	Intermediate filament protein, coiled coil region
gi\|4503979\|ref\|NP_002046.1\|	2.09e-23	294-372	Intermediate filament protein, coiled coil region
	0.00000000000033	68-104	Intermediate filament protein, coiled coil region
gi\|4504919\|ref\|NP_002264.1\|	1.15e-25	320-397	Intermediate filament protein, coiled coil region
	0.00000000000575	90-124	Intermediate filament protein, coiled coil region
	0.000000178	126-197	Intermediate filament protein, coiled coil region
gi\|4504927\|ref\|NP_003762.1\|	1.15e-24	321-399	Intermediate filament protein, coiled coil region
	0.00000000523	91-126	Intermediate filament protein, coiled coil region
gi\|4504935\|ref\|NP_002274.1\|	9.59e-22	352-429	Intermediate filament protein, coiled coil region
	0.0000000000251	122-156	Intermediate filament protein, coiled coil region
	0.000628	159-230	Intermediate filament protein, coiled coil region
gi\|4557699\|ref\|NP_000214.1\|	2.62e-22	357-435	Intermediate filament protein, coiled coil region
	0.00000000146	123-158	Intermediate filament protein, coiled coil region
gi\|4557701\|ref\|NP_000413.1\|	3.66e-26	312-390	Intermediate filament protein, coiled coil region
	0.00000000293	82-116	Intermediate filament protein, coiled coil region
gi\|4557888\|ref\|NP_000215.1\|	2.27e-22	308-385	Intermediate filament protein, coiled coil region
	0.000000000785	78-113	Intermediate filament protein, coiled coil region
gi\|47132620\|ref\|NP_000414.2\|	1.19e-22	409-486	Intermediate filament protein, coiled coil region
	0.0000000000387	177-211	Intermediate filament protein, coiled coil region
	0.0000136	222-287	Intermediate filament protein, coiled coil region
gi\|5031839\|ref\|NP_005545.1\|	1.13e-23	394-471	Intermediate filament protein, coiled coil region
	0.0000000000162	162-196	Intermediate filament protein, coiled coil region
	0.00000000345	201-272	Intermediate filament protein, coiled coil region
gi\|5031875\|ref\|NP_005563.1\|	3.84e-18	306-382	Intermediate filament protein, coiled coil region
	0.0000000502	30-62	Intermediate filament protein, coiled coil region
gi\|5031877\|ref\|NP_005564.1\|	3.14e-17	320-387	Intermediate filament protein, coiled coil region
	0.00000000942	31-64	Intermediate filament protein, coiled coil region
gi\|55749932\|ref\|NP_001918.3\|	7.15e-25	333-411	Intermediate filament protein, coiled coil region
	0.000000000000173	106-142	Intermediate filament protein, coiled coil region
gi\|55770882\|ref\|NP_003761.3\|	1.71e-22	343-413	Intermediate filament protein, coiled coil region
	0.00000000424	102-135	Intermediate filament protein, coiled coil region
gi\|55956899\|ref\|NP_000217.2\|	2.27e-21	382-460	Intermediate filament protein, coiled coil region
	0.000000046	151-186	Intermediate filament protein, coiled coil region
gi\|62414289\|ref\|NP_003371.2\|	1.43e-25	328-406	Intermediate filament protein, coiled coil region
	0.0000000000000115	101-138	Intermediate filament protein, coiled coil region
gi\|67782365\|ref\|NP_005547.3\|	8.02e-23	321-398	Intermediate filament protein, coiled coil region
	0.000000000068	90-124	Intermediate filament protein, coiled coil region
	0.00000377	136-199	Intermediate filament protein, coiled coil region
gi\|89213250\|ref\|NP_001034759.1\|	0.00000000000068	457-525	Intermediate filament protein, coiled coil region
	0.00162	77-107	Intermediate filament protein, coiled coil region
gi\|89357932\|ref\|NP_775487.2\|	1.12e-20	343-419	Intermediate filament protein, coiled coil region
	0.0000000000942	110-144	Intermediate filament protein, coiled coil region
	0.00000366	149-224	Intermediate filament protein, coiled coil region
gi\|94538345\|ref\|NP_002271.3\|	6.28e-23	325-402	Intermediate filament protein, coiled coil region
	0.000000000392	95-129	Intermediate filament protein, coiled coil region

Weak hits:
gi\|166706887\|ref\|NP_110413.2\|	0.000115	391-456	Intermediate filament protein, coiled coil region
gi\|22208850\|ref\|NP_078799.2\|	0.0602	15-57	Intermediate filament protein, coiled coil region
gi\|239787821\|ref\|NP_001155180.1\|	0.00012	391-457	Intermediate filament protein, coiled coil region
gi\|56549091\|ref\|NP_061332.2\|	0.0392	178-229	Intermediate filament protein, coiled coil region

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Select to display Genome Domains Proteins

No Yes ALL 91545 91545

No Yes Homo sapiens 76_38 Human 312 169

No Yes Pan troglodytes 76_2.1.4 Chimpanzee 180 85

No Yes Gorilla gorilla 76_3.1 Western gorilla 291 147

No Yes Pongo abelii 76_2 Sumatran orangutan 158 78

No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 152 75

No Yes Papio anubis 76 Olive baboon 210 99

No Yes Macaca mulatta 76_1 Rhesus monkey 284 161

No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 492 246

No Yes Otolemur garnettii 76_3 Small-eared galago 182 92

No Yes Microcebus murinus 76_1 Gray mouse lemur 130 67

No Yes Rattus norvegicus 76_5.0 Norway rat 163 82

No Yes Mus musculus 76_38 House mouse 188 94

No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 117 63

No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 129 61

No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 139 71

No Yes Cavia porcellus 76_3 Domestic guinea pig 71 37

No Yes Oryctolagus cuniculus 76_2 Rabbit 144 69

No Yes Ochotona princeps 76 American pika 119 61

No Yes Tupaia belangeri 76 Northern tree shrew 108 57

No Yes Sus scrofa 76_10.2 Pig 138 69

No Yes Bos taurus 76_3.1 Cattle 177 82

No Yes Ovis aries 76_3.1 Sheep 163 77

No Yes Vicugna pacos 76_1 Alpaca 58 37

No Yes Tursiops truncatus 76_1 Bottlenose dolphin 84 48

No Yes Mustela putorius furo 76_1.0 Domestic ferret 139 69

No Yes Ailuropoda melanoleuca 76_1 Giant panda 172 87

No Yes Canis familiaris 76_3.1 Dog 206 107

No Yes Felis catus 76_6.2 Domestic cat 161 79

No Yes Equus caballus 76_2 Horse 190 92

No Yes Myotis lucifugus 76_2.0 Little brown bat 168 86

No Yes Pteropus vampyrus 76_1 Large flying fox 132 69

No Yes Sorex araneus 76_1 European shrew 75 46

No Yes Erinaceus europaeus 76 Western European hedgehog 115 60

No Yes Procavia capensis 76_1 Cape rock hyrax 109 59

No Yes Loxodonta africana 76_3 African savanna elephant 188 90

No Yes Echinops telfairi 76 Small Madagascar hedgehog 103 57

No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 177 77

No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 60 39

No Yes Macropus eugenii 76_1.0 Tammar wallaby 118 66

No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 160 79

No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 121 63

No Yes Ornithorhynchus anatinus 76_5 Platypus 151 82

No Yes Saccoglossus kowalevskii v3.0 2 1

No Yes Petromyzon marinus 76_7.0 Sea lamprey 56 36

No Yes Meleagris gallopavo 76_2 Turkey 97 50

No Yes Gallus gallus 76_4 Chicken 73 39

No Yes Anas platyrhynchos 76_1.0 Mallard 56 34

No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 53 37

No Yes Ficedula albicollis 76_1.0 Collared flycatcher 88 48

No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 69 43

No Yes Anolis carolinensis 76_2.0 Green anole 102 54

No Yes Xenopus laevis African clawed frog 367 182

No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 121 64

No Yes Latimeria chalumnae 76_1 Coelacanth 82 41

No Yes Lepisosteus oculatus 76 Spotted gar 101 50

No Yes Gadus morhua 76_1 Atlantic cod 113 64

No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 103 58

No Yes Takifugu rubripes 76_4 Torafugu 397 197

No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 153 79

No Yes Oryzias latipes 76_1 Japanese medaka 128 67

No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 88 49

No Yes Poecilia formosa 76 Amazon molly 105 48

No Yes Oreochromis niloticus 76_1.0 Nile tilapia 116 59

No Yes Astyanax mexicanus 76 Mexican tetra 115 58

No Yes Danio rerio 76_9 Zebrafish 200 107

No Yes Oikopleura dioica 8 4

No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 19 11

No Yes Ciona intestinalis 76 Vase tunicate 12 7

No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 5 4

No Yes Adineta vaga 63 35

No Yes Octopus bimaculoides 280 17 12

No Yes Crassostrea gigas 22 Pacific oyster 7 4

No Yes Lottia gigantea Owl limpet 11 6

No Yes Helobdella robusta 21 12

No Yes Capitella sp. I 3 2

No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1

No Yes Heliconius melpomene Postman butterfly 2 1

No Yes Bombyx mori Domestic silkworm 2 2

No Yes Nasonia vitripennis Jewel wasp 2 1

No Yes Apis mellifera 38.2d (Not maintained) Honey bee 4 4

No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 1

No Yes Linepithema humile v1.1 Argentine ant 2 1

No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1

No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2

No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 1

No Yes Atta cephalotes v1.1 2 1

No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 2

No Yes Lucilia cuprina Australian sheep blowfly 4 2

No Yes Drosophila grimshawi 1.3 4 2

No Yes Drosophila willistoni 1.3 4 2

No Yes Drosophila pseudoobscura 2.13 4 2

No Yes Drosophila persimilis 1.3 4 3

No Yes Drosophila suzukii 4 2

No Yes Drosophila yakuba 1.3 4 2

No Yes Drosophila simulans 1.3 2 1

No Yes Drosophila sechellia 1.3 4 2

No Yes Drosophila melanogaster 76_5 Fruit fly 10 5

No Yes Drosophila erecta 1.3 4 2

No Yes Drosophila ananassae 1.3 4 2

No Yes Drosophila virilis 1.2 4 2

No Yes Drosophila mojavensis 1.3 4 2

No Yes Megaselia scalaris 22 2 1

No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 2

No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 2

No Yes Anopheles darlingi 22 American malaria mosquito 4 2

No Yes Anopheles gambiae 49_3j African malaria mosquito 4 2

No Yes Tribolium castaneum 3.0 Red flour beetle 2 1

No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 1

No Yes Acyrthosiphon pisum Pea aphid 5 3

No Yes Rhodnius prolixus 22 2 1

No Yes Daphnia pulex Common water flea 3 2

No Yes Strigamia maritima 22 2 1

No Yes Sarcoptes scabiei 2 1

No Yes Tetranychus urticae Two-spotted spider mite 1 1

No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 1

No Yes Pristionchus pacificus 11 7

No Yes Meloidogyne incognita Southern root-knot nematode 10 5

No Yes Meloidogyne hapla 3 2

No Yes Onchocerca volvulus 22 10 5

No Yes Brugia malayi WS250 Agent of lymphatic filariasis 14 10

No Yes Caenorhabditis japonica 17 10

No Yes Caenorhabditis brenneri 24 13

No Yes Caenorhabditis remanei 24 13

No Yes Caenorhabditis elegans 76_235 Roundworm 48 25

No Yes Caenorhabditis briggsae 2 25 14

No Yes Trichinella spiralis 22 8 5

No Yes Hymenolepis microstoma 7 4

No Yes Echinococcus multilocularis 6 4

No Yes Echinococcus granulosus 6 4

No Yes Taenia solium Pork tapeworm 6 4

No Yes Schistosoma mansoni 6 4

No Yes Mnemiopsis leidyi Sea walnut 1 1

No Yes Acropora digitifera v1.0 4 2

No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 1

No Yes Hydra vulgaris 2 2

No Yes Amphimedon queenslandica 4 2

No Yes Proterospongia sp. ATCC 50818 2 2

No Yes Monosiga brevicollis 1 1

No Yes Capsaspora owczarzaki ATCC 30864 1 1

No Yes Sebacina vermifera MAFF 305830 v1.0 1 1

No Yes Penicillium marneffei ATCC 18224 1 1

No Yes Amborella trichopoda 22 2 2

No Yes Thecamonas trahens ATCC 50062 1 1

No Yes Albugo laibachii 22 1 1

No Yes Pythium iwayamai DAOM BR242034 22 1 1

No Yes Pythium aphanidermatum DAOM BR444 22 1 1

No Yes Pythium irregulare DAOM BR486 22 1 1

No Yes Pythium vexans DAOM BR484 22 1 1

No Yes Phytophthora sojae 1.1 1 1

No Yes Phytophthora infestans T30-4 1 1

No Yes Hyaloperonospora arabidopsidis 22 1 1

No Yes Trichomonas vaginalis 2 2

No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 238 119

No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 2

No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 2

No Yes Ascaris suum Victoria/Ghent Pig roundworm 14 10

No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 34 18

No Yes Homo sapiens 75_37 (old version GRC) Human 313 169

No Yes Homo sapiens (NCBI version) Human 185 86

No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 157 72

No Yes Loa loa v3.3 (Request) Eye worm 11 6

No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 8 7

No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 7 5

No Yes Homo sapiens 69_37 Human 184 85

No Yes Pan troglodytes 69_2.1.4 Chimpanzee 152 72

No Yes Gorilla gorilla 69_3.1 Western gorilla 208 106

No Yes Pongo abelii 69_2 Sumatran orangutan 153 75

No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 136 66

No Yes Macaca mulatta 69_1 Rhesus monkey 220 122

No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 310 154

No Yes Otolemur garnettii 69_3 Small-eared galago 179 91

No Yes Microcebus murinus 69_1 Gray mouse lemur 130 67

No Yes Rattus norvegicus 69_3.4 Norway rat 145 73

No Yes Mus musculus 69_38 House mouse 159 74

No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 117 63

No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 126 60

No Yes Cavia porcellus 69_3 Domestic guinea pig 69 36

No Yes Oryctolagus cuniculus 69_2 Rabbit 122 60

No Yes Ochotona princeps 69 American pika 119 61

No Yes Tupaia belangeri 69 Northern tree shrew 108 57

No Yes Sus scrofa 69_10.2 Pig 131 64

No Yes Bos taurus 69_3.1 Cattle 166 77

No Yes Vicugna pacos 69_1 Alpaca 58 37

No Yes Tursiops truncatus 69_1 Bottlenose dolphin 84 48

No Yes Mustela putorius furo 69_1.0 Domestic ferret 139 69

No Yes Ailuropoda melanoleuca 69_1 Giant panda 153 77

No Yes Canis familiaris 69_3.1 Dog 149 76

No Yes Felis catus 69 Domestic cat 116 63

No Yes Equus caballus 69_2 Horse 165 81

No Yes Myotis lucifugus 69_2.0 Little brown bat 167 85

No Yes Pteropus vampyrus 69_1 Large flying fox 132 69

No Yes Sorex araneus 69_1 European shrew 75 46

No Yes Erinaceus europaeus 69 Western European hedgehog 115 60

No Yes Procavia capensis 69_1 Cape rock hyrax 109 59

No Yes Loxodonta africana 69_3 African savanna elephant 123 60

No Yes Echinops telfairi 69 Small Madagascar hedgehog 103 57

No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 85 53

No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 60 39

No Yes Macropus eugenii 69_1.0 Tammar wallaby 118 66

No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 141 69

No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 116 60

No Yes Ornithorhynchus anatinus 69_5 Platypus 125 70

No Yes Petromyzon marinus 69_7.0 Sea lamprey 53 33

No Yes Meleagris gallopavo 69_2 Turkey 56 32

No Yes Gallus gallus 69_2 Chicken 62 35

No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 49 34

No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 60 39

No Yes Anolis carolinensis 69_2.0 Green anole 82 44

No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 96 50

No Yes Latimeria chalumnae 69_1 Coelacanth 77 39

No Yes Gadus morhua 69_1 Atlantic cod 89 52

No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 90 51

No Yes Takifugu rubripes 69_4 Torafugu 90 46

No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 85 44

No Yes Oryzias latipes 69_1 Japanese medaka 88 48

No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 88 49

No Yes Oreochromis niloticus 69_1.0 Nile tilapia 98 50

No Yes Danio rerio 69_9 Zebrafish 128 65

No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 12 6

No Yes Ciona intestinalis 69 Vase tunicate 12 7

No Yes Drosophila melanogaster 69_5 Fruit fly 4 2

No Yes Caenorhabditis elegans 69_215 Roundworm 21 11

No Yes 1_050719N (meta-genome) 2 2

No Yes 2_050719S (meta-genome) 1 1

No Yes Bath Hot Springs, planktonic community (meta-genome) 1 1

No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 2 2

No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 1 1

No Yes Mouse Gut Community lean2 (meta-genome) 1 1

No Yes NCBI 2017_08 genome 37582 19325

No Yes Protozoadb 2010_08 (Protozoadb) 4 4

No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 1 1

No Yes STRING v9.0.5 (STRING) 3252 1692

No Yes Uniprot 2018_03 genome 24274 12807

No Yes Global Ocean Sampling Expedition (GOS) 4 4

No Yes PDB chains (SCOP 1.75) (PDB) 4 4

No Yes Protein Data Bank (all PDB sequenc) 27 27

No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 31 31

No Yes TargetDB (Targets) 100 54

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Intermediate filament protein, coiled coil region superfamily domain assignments
in
Homo sapiens

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Add assignments from groups of genomes

Add assignments from individual genomes