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EGF/Laminin superfamily domain assignments
in
Mnemiopsis leidyi

Assignment details

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Mnemiopsis leidyi has 178 significant domains in 50 proteins.

     

Sequence ID   Evalue   Region   Family  
ML00359a-PA   0.0000000639   1083-1118   EGF-type module  
ML004921a-PA   0.000000000878   1146-1189   EGF-type module  
  0.00000000176   2784-2827   EGF-type module  
  0.00000000939   1033-1079   EGF-type module  
  0.0000000166   1220-1262   EGF-type module  
  0.0000000168   1498-1541   EGF-type module  
  0.0000000719   768-805   EGF-type module  
  0.00000016   2975-3016   EGF-type module  
  0.000000184   3050-3088   EGF-type module  
  0.000000189   991-1030   EGF-type module  
  0.00000026   1776-1819   EGF-type module  
  0.00000027   3013-3055   EGF-type module  
  0.000000293   581-622   EGF-type module  
  0.00000037   808-850   EGF-type module  
  0.00000046   846-893   EGF-type module  
  0.000000503   1375-1422   EGF-type module  
  0.000000984   1067-1111   EGF-type module  
  0.00000102   2819-2859   EGF-type module  
  0.0000016   1184-1222   EGF-type module  
  0.000002   1419-1465   EGF-type module  
  0.00000234   2747-2784   EGF-type module  
  0.00000319   2933-2974   EGF-type module  
  0.00000532   1108-1150   EGF-type module  
  0.00000739   2895-2935   EGF-type module  
  0.0000103   1301-1350   EGF-type module  
  0.0000158   1462-1502   EGF-type module  
  0.0000246   1262-1308   EGF-type module  
  0.0000251   3089-3134   EGF-type module  
  0.0000287   539-577   EGF-type module  
  0.0000347   619-662   EGF-type module  
  0.0000419   2627-2669   EGF-type module  
  0.0000592   884-923   EGF-type module  
  0.000075   929-975   EGF-type module  
ML007435a-PA   0.000000104   599-649   EGF-type module  
ML00872a-PA   0.00000268   1203-1249   Laminin-type module  
ML016314a-PA   0.0000000461   248-288   EGF-type module  
ML016345a-PA   0.0000132   108-144   EGF-type module  
ML017422a-PA   0.0000135   76-118   EGF-type module  
ML019111a-PA   0.000000000175   351-398   EGF-type module  
ML020019a-PA   0.00000437   343-391   EGF-type module  
ML020038a-PA   0.00000000671   1050-1101   EGF-type module  
  0.0000000383   1144-1190   Laminin-type module  
  0.000000103   1203-1248   Laminin-type module  
ML020113a-PA   0.00000652   1844-1890   EGF-type module  
ML02274a-PA   0.0000000103   1062-1111   EGF-type module  
  0.000000587   1097-1142   EGF-type module  
ML035910a-PA   0.0000000391   420-471   Laminin-type module  
  0.000000142   472-518   Laminin-type module  
  0.00000117   368-415   Laminin-type module  
  0.0000642   521-572   Laminin-type module  
ML03664a-PA   0.00000209   403-445   EGF-type module  
ML040527a-PA   0.000000024   1217-1268   EGF-type module  
ML04262a-PA   0.00000162   476-524   Laminin-type module  
  0.0000144   1054-1087   EGF-type module  
ML044918a-PA   0.0000000271   655-696   EGF-type module  
  0.000000196   373-415   EGF-type module  
  0.000000652   145-180   EGF-type module  
  0.0000127   471-510   EGF-type module  
ML046712a-PA   0.0000000128   981-1035   EGF-type module  
  0.00000014   1134-1178   Laminin-type module  
  0.0000218   1075-1121   Laminin-type module  
ML04798a-PA   0.000000711   204-256   Laminin-type module  
  0.00000243   130-178   Laminin-type module  
  0.0000347   302-341   Laminin-type module  
ML049626a-PA   0.0000000186   842-893   EGF-type module  
  0.0000067   936-983   Laminin-type module  
ML05951a-PA   0.000000000446   594-648   Laminin-type module  
  0.00000000176   487-539   Laminin-type module  
  0.00000000419   647-694   Laminin-type module  
  0.00000000474   107-157   Laminin-type module  
  0.00000022   58-100   Laminin-type module  
  0.0000067   155-204   Laminin-type module  
  0.000019   545-596   Laminin-type module  
ML06733a-PA   0.000000112   328-365   EGF-type module  
  0.00000069   685-723   EGF-type module  
ML06736a-PA   0.0000419   549-587   EGF-type module  
ML07112a-PA   0.000000114   246-289   Laminin-type module  
  0.000000164   179-228   EGF-type module  
  0.000000502   305-350   Laminin-type module  
ML073410a-PA   0.000000000393   410-447   EGF-type module  
  0.000000000632   687-728   EGF-type module  
  0.00000000658   1001-1042   EGF-type module  
  0.0000000201   648-691   EGF-type module  
  0.00000015   967-1002   EGF-type module  
  0.000003   926-964   EGF-type module  
ML082718a-PA   0.0000000000677   311-355   EGF-type module  
  0.0000000129   341-383   EGF-type module  
ML097515a-PA   0.000000000218   724-770   Laminin-type module  
  0.00000000251   1170-1218   Laminin-type module  
  0.000000187   869-921   Laminin-type module  
  0.00000128   1329-1371   Laminin-type module  
  0.00000145   1535-1581   Laminin-type module  
  0.00000502   73-111   Laminin-type module  
  0.0000176   1131-1172   Laminin-type module  
  0.0000212   30-70   Laminin-type module  
  0.0000363   775-820   Laminin-type module  
  0.0000391   1287-1331   Laminin-type module  
ML09866a-PA   0.00000075   154-185   EGF-type module  
  0.000000857   189-225   EGF-type module  
  0.0000798   31-63   EGF-type module  
ML101022a-PA   0.0000000123   672-721   Laminin-type module  
  0.0000000307   269-312   Laminin-type module  
  0.00000014   469-517   Laminin-type module  
  0.000000239   69-118   Laminin-type module  
  0.000000446   770-816   Laminin-type module  
  0.000000977   1102-1140   Laminin-type module  
  0.00000586   1397-1437   Laminin-type module  
  0.00000949   1509-1548   Laminin-type module  
  0.00000949   2033-2083   Laminin-type module  
  0.0000103   1932-1973   Laminin-type module  
  0.0000114   369-409   Laminin-type module  
  0.0000335   1564-1610   Laminin-type module  
  0.0000698   2156-2202   Laminin-type module  
ML10903a-PA   0.000000142   5-49   EGF-type module  
ML120750a-PA   0.000000265   1124-1169   Laminin-type module  
  0.000000642   1065-1111   Laminin-type module  
  0.00000164   972-1021   EGF-type module  
ML12581a-PA   0.0000235   416-452   EGF-type module  
ML128617a-PA   0.0000000000142   133-175   EGF-type module  
  0.000000000102   95-138   EGF-type module  
  0.000000000347   283-324   EGF-type module  
  0.00000000198   207-248   EGF-type module  
  0.0000000158   441-476   EGF-type module  
  0.0000000305   324-364   EGF-type module  
  0.0000000672   480-516   EGF-type module  
  0.00000267   57-98   EGF-type module  
  0.0000224   405-439   EGF-type module  
  0.0000225   371-408   EGF-type module  
  0.0000317   252-285   EGF-type module  
ML128618a-PA   0.0000000000229   127-165   EGF-type module  
  0.0000000018   91-132   EGF-type module  
  0.00000781   16-60   EGF-type module  
  0.0000429   164-199   EGF-type module  
ML13913a-PA   0.000000000335   97-142   Laminin-type module  
ML141745a-PA   0.000000307   342-386   Laminin-type module  
  0.0000193   295-344   Laminin-type module  
ML14875a-PA   0.0000000229   306-356   EGF-type module  
ML20264a-PA   0.0000000293   437-478   EGF-type module  
  0.000000318   1289-1332   EGF-type module  
  0.0000768   1590-1631   EGF-type module  
ML20591a-PA   0.000000000949   457-499   Laminin-type module  
  0.00000000195   338-390   Laminin-type module  
  0.000000307   287-340   Laminin-type module  
  0.000000586   506-544   Laminin-type module  
ML20686a-PA   0.00000103   25-68   EGF-type module  
ML21866a-PA   0.000000000725   513-560   Laminin-type module  
  0.0000001   568-614   Laminin-type module  
  0.000000106   617-658   Laminin-type module  
  0.00000022   413-463   Laminin-type module  
  0.00000558   152-200   Laminin-type module  
  0.0000103   3-42   Laminin-type module  
  0.0000642   113-154   Laminin-type module  
ML238312a-PA   0.0000838   408-449   EGF-type module  
ML239512a-PA   0.000067   554-591   EGF-type module  
ML24001a-PA   0.0000000244   1172-1225   EGF-type module  
  0.000000363   1325-1370   Laminin-type module  
  0.00000111   1266-1312   Laminin-type module  
ML24144a-PA   0.000000000335   316-362   EGF-type module  
  0.00000000142   72-109   EGF-type module  
  0.0000000018   397-437   EGF-type module  
  0.0000000032   951-991   EGF-type module  
  0.0000000226   357-394   EGF-type module  
  0.0000000335   913-956   EGF-type module  
  0.00000771   434-477   EGF-type module  
  0.000011   112-149   EGF-type module  
  0.0000111   987-1028   EGF-type module  
  0.0000174   866-901   EGF-type module  
  0.0000599   273-311   EGF-type module  
ML258254a-PA   0.00000711   857-904   Laminin-type module  
ML267515a-PA   0.00000000237   302-351   EGF-type module  
  0.00000000753   135-185   EGF-type module  
  0.0000000211   102-145   EGF-type module  
ML26752a-PA   0.0000000000136   766-815   EGF-type module  
  0.0000000524   800-848   EGF-type module  
ML30814a-PA   0.000000135   1247-1298   EGF-type module  
  0.00000173   1400-1445   Laminin-type module  
  0.00000433   1341-1387   Laminin-type module  
ML31401a-PA   0.0000000000347   471-516   EGF-type module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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