SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


beta-beta-alpha zinc fingers superfamily domain assignments
in
Caenorhabditis elegans 76_235

Assignment details

(show help)


Caenorhabditis elegans 76_235 has 352 significant domains in 190 proteins.

     

Sequence ID   Evalue   Region   Family  
B0280.4   9.3e-17   150-202   Classic zinc finger, C2H2  
  0.0000000142   125-159   Classic zinc finger, C2H2  
B0310.2   0.000000000000605   304-358   Classic zinc finger, C2H2  
C03B8.4   0.000075   1309-1330,1551-1578   Classic zinc finger, C2H2  
  0.00189   956-1002   Plant C2H2 finger (QALGGH zinc finger)  
  0.0102   1657-1708   Classic zinc finger, C2H2  
  0.0155   500-529   Classic zinc finger, C2H2  
  0.0172   1141-1186   Classic zinc finger, C2H2  
C04F5.9   0.00000197   3-54   Classic zinc finger, C2H2  
  0.0000351   263-312   Classic zinc finger, C2H2  
  0.00018   151-174   Classic zinc finger, C2H2  
  0.00617   396-430   Classic zinc finger, C2H2  
C06E1.8   0.0000000774   76-127   Classic zinc finger, C2H2  
  0.000000341   49-76   Classic zinc finger, C2H2  
C07A12.1a   0.000000732   41-92   Plant C2H2 finger (QALGGH zinc finger)  
  0.00000186   14-43   Classic zinc finger, C2H2  
C07A12.1b   0.000000376   41-92   Plant C2H2 finger (QALGGH zinc finger)  
  0.00000189   14-43   Classic zinc finger, C2H2  
C09H6.1a   0.00000107   111-163   Classic zinc finger, C2H2  
  0.00000795   707-759   Classic zinc finger, C2H2  
  0.000135   1022-1075   Classic zinc finger, C2H2  
  0.00819   1163-1212   Classic zinc finger, C2H2  
  0.0238   585-635   Classic zinc finger, C2H2  
C09H6.1b   0.00000107   111-163   Classic zinc finger, C2H2  
  0.00000795   707-759   Classic zinc finger, C2H2  
  0.000135   1022-1075   Classic zinc finger, C2H2  
  0.0032   1163-1212   Classic zinc finger, C2H2  
  0.0238   585-635   Classic zinc finger, C2H2  
C10A4.8   8.43e-19   166-224   Classic zinc finger, C2H2  
  0.0000000000106   213-248   Classic zinc finger, C2H2  
C16A3.4   0.000000000476   66-108   Classic zinc finger, C2H2  
  0.00000000238   145-223,252-266   Classic zinc finger, C2H2  
  0.000217   2-41   Classic zinc finger, C2H2  
C16C10.8   0.0000000452   29-58   C2HC finger  
  0.000000607   1-27   C2HC finger  
C18D1.1.1   0.00000391   314-382   Classic zinc finger, C2H2  
C18D1.1.2   0.00000391   314-382   Classic zinc finger, C2H2  
C27A12.2   0.00000000000000375   428-485   Classic zinc finger, C2H2  
  0.00000000000216   69-127   Classic zinc finger, C2H2  
  0.0000000000146   465-526   Classic zinc finger, C2H2  
  0.000239   117-150   Classic zinc finger, C2H2  
C27A12.3   1.11e-16   279-334   Classic zinc finger, C2H2  
  0.00000000000000161   68-118   Classic zinc finger, C2H2  
  0.000000131   319-375   Classic zinc finger, C2H2  
  0.0000666   107-141   Classic zinc finger, C2H2  
  0.0695   47-77   Classic zinc finger, C2H2  
C27A2.7   0.000000232   162-196   Classic zinc finger, C2H2  
  0.000705   84-136   Classic zinc finger, C2H2  
C27C12.2   5.23e-17   398-450   Classic zinc finger, C2H2  
  0.000000000000441   367-413   Classic zinc finger, C2H2  
C34H3.2   6.62e-18   146-198   Classic zinc finger, C2H2  
  0.000000000458   121-155   Classic zinc finger, C2H2  
C46E10.8   0.00000215   28-86   Classic zinc finger, C2H2  
C46E10.9   0.0000000000236   208-260   Classic zinc finger, C2H2  
C47C12.3a.1   6.87e-20   119-174   Classic zinc finger, C2H2  
  0.00000000000421   178-226   Classic zinc finger, C2H2  
C47C12.3a.2   6.87e-20   119-174   Classic zinc finger, C2H2  
  0.00000000000421   178-226   Classic zinc finger, C2H2  
C47C12.3b   7.38e-20   132-187   Classic zinc finger, C2H2  
  0.00000000000446   191-239   Classic zinc finger, C2H2  
C52E12.6   0.000000362   146-197   Classic zinc finger, C2H2  
  0.0000628   107-133   Classic zinc finger, C2H2  
  0.0000702   214-260   Classic zinc finger, C2H2  
C53D5.4   0.00000000000453   227-277   Classic zinc finger, C2H2  
C55B7.12a   6.55e-21   144-196   Classic zinc finger, C2H2  
  9.59e-20   105-157   Classic zinc finger, C2H2  
  0.00000175   189-213   Classic zinc finger, C2H2  
C55B7.12b   9.83e-21   203-255   Classic zinc finger, C2H2  
  1.5e-19   164-216   Classic zinc finger, C2H2  
  0.00000244   248-272   Classic zinc finger, C2H2  
C55C2.1   5.39e-19   116-168   Classic zinc finger, C2H2  
  0.000000000154   93-125   Classic zinc finger, C2H2  
F08B4.7   1.93e-21   1-56   HkH motif-containing C2H2 finger  
F08C6.7   0.000000000426   111-159   Classic zinc finger, C2H2  
  0.0000000554   240-274   Classic zinc finger, C2H2  
  0.069   150-188   Classic zinc finger, C2H2  
F10B5.3   0.0000307   254-301   Classic zinc finger, C2H2  
  0.00379   322-343,388-412   Classic zinc finger, C2H2  
F11A10.2   0.000000913   47-89   HkH motif-containing C2H2 finger  
F12E12.5   0.0000000000123   62-109   Classic zinc finger, C2H2  
  0.00000521   271-319   Classic zinc finger, C2H2  
  0.00714   18-47   Classic zinc finger, C2H2  
  0.0303   154-179   Classic zinc finger, C2H2  
F13D11.2a   0.0000000889   929-977   Classic zinc finger, C2H2  
  0.000000306   578-629   Classic zinc finger, C2H2  
  0.00005   337-381   Classic zinc finger, C2H2  
  0.0000575   536-589   Classic zinc finger, C2H2  
F13D11.2b   0.0000000834   907-955   Classic zinc finger, C2H2  
  0.000000269   556-607   Classic zinc finger, C2H2  
  0.0000473   315-359   Classic zinc finger, C2H2  
  0.000056   514-567   Classic zinc finger, C2H2  
F13G3.1   0.0000000000771   88-134   Classic zinc finger, C2H2  
F13H6.1a   2.72e-16   495-544   Classic zinc finger, C2H2  
  0.000163   533-572   Classic zinc finger, C2H2  
F13H6.1b.1   2.8e-16   499-548   Classic zinc finger, C2H2  
  0.000165   537-576   Classic zinc finger, C2H2  
F13H6.1b.2   2.8e-16   499-548   Classic zinc finger, C2H2  
  0.000165   537-576   Classic zinc finger, C2H2  
F15C11.1   1.11e-16   589-639   Classic zinc finger, C2H2  
  0.000000000000033   304-355   Classic zinc finger, C2H2  
  0.00195   701-721   Classic zinc finger, C2H2  
  0.00437   105-150   Classic zinc finger, C2H2  
F21A9.2   0.000000851   325-376   Classic zinc finger, C2H2  
  0.0000128   280-303   C2HC finger  
  0.0131   122-152   Classic zinc finger, C2H2  
F25D7.3a   3.58e-19   545-601   Classic zinc finger, C2H2  
  6.55e-16   504-554   Classic zinc finger, C2H2  
  7.96e-16   586-638   Classic zinc finger, C2H2  
F25D7.3b   3.58e-19   545-601   Classic zinc finger, C2H2  
  6.37e-16   504-554   Classic zinc finger, C2H2  
  7.93e-16   586-638   Classic zinc finger, C2H2  
F25H8.6   0.000000000583   127-176   BED zinc finger  
F26A10.2   0.0000000000997   46-94   Classic zinc finger, C2H2  
  0.000000583   265-319   Classic zinc finger, C2H2  
F26F4.8   0.0000000347   234-284   Classic zinc finger, C2H2  
  0.000000169   25-73   Classic zinc finger, C2H2  
F28F9.1   0.00000000000000262   503-555   Classic zinc finger, C2H2  
  0.0000000000000611   22-71   Classic zinc finger, C2H2  
  0.00000000821   478-512   Classic zinc finger, C2H2  
F34D10.5   5.78e-16   155-207   Classic zinc finger, C2H2  
  0.0000726   133-164   Classic zinc finger, C2H2  
F35H8.3   0.00000000000000124   322-374   Classic zinc finger, C2H2  
  0.0000000189   299-330   Classic zinc finger, C2H2  
  0.000000094   170-222   Classic zinc finger, C2H2  
  0.000362   228-275   Classic zinc finger, C2H2  
F36F12.8   0.0000518   67-116   Classic zinc finger, C2H2  
  0.00584   40-75   Classic zinc finger, C2H2  
F37D6.2a.1   0.0000104   274-321   Classic zinc finger, C2H2  
F37D6.2a.2   0.0000104   274-321   Classic zinc finger, C2H2  
F37D6.2b   0.0000104   273-320   Classic zinc finger, C2H2  
F37D6.2c.1   0.0000194   274-321   Classic zinc finger, C2H2  
F37D6.2c.2   0.0000194   274-321   Classic zinc finger, C2H2  
F39B2.1   0.00000000369   411-462   Classic zinc finger, C2H2  
  0.0000000126   306-366   Classic zinc finger, C2H2  
  0.0000607   246-269   Classic zinc finger, C2H2  
  0.000199   469-496   Plant C2H2 finger (QALGGH zinc finger)  
  0.000213   354-401   Classic zinc finger, C2H2  
  0.00504   179-204   Classic zinc finger, C2H2  
F40F8.7.1   0.00000406   158-207   Classic zinc finger, C2H2  
F40F8.7.2   0.00000406   158-207   Classic zinc finger, C2H2  
F41B5.1   0.00000143   3-54   BED zinc finger  
F43G9.11   3.17e-17   213-265   Classic zinc finger, C2H2  
  0.000000000000153   174-228   Classic zinc finger, C2H2  
  0.000000124   134-187   Classic zinc finger, C2H2  
F45B8.4   4.55e-20   162-219   Classic zinc finger, C2H2  
  1.68e-16   208-260   Classic zinc finger, C2H2  
  0.0000000000000122   124-176   Classic zinc finger, C2H2  
F45H11.1a   0.00000277   259-288   Classic zinc finger, C2H2  
F45H11.1b   0.00000299   259-288   Classic zinc finger, C2H2  
F46B6.7.1   1.27e-27   427-564   variant C2H2 finger  
  0.00000000000000809   344-424   Classic zinc finger, C2H2  
F46B6.7.2   1.27e-27   427-564   variant C2H2 finger  
  0.00000000000000809   344-424   Classic zinc finger, C2H2  
F47E1.3   2.66e-22   532-589   Classic zinc finger, C2H2  
  0.0000000000157   493-546   Classic zinc finger, C2H2  
  0.00913   462-504   Classic zinc finger, C2H2  
F47H4.1a   0.0000207   52-101   Classic zinc finger, C2H2  
  0.000773   24-62   Classic zinc finger, C2H2  
F47H4.1b   0.0000417   6-55   Classic zinc finger, C2H2  
F49H12.1a   0.00000000000000363   104-156   Classic zinc finger, C2H2  
  0.000000000062   73-115   Classic zinc finger, C2H2  
  0.0184   290-321   Classic zinc finger, C2H2  
F49H12.1b.1   0.00000000000000322   78-130   Classic zinc finger, C2H2  
  0.0000000000478   47-89   Classic zinc finger, C2H2  
  0.0163   264-295   Classic zinc finger, C2H2  
F49H12.1b.2   0.00000000000000322   78-130   Classic zinc finger, C2H2  
  0.0000000000478   47-89   Classic zinc finger, C2H2  
  0.0163   264-295   Classic zinc finger, C2H2  
F52B5.7   0.0000597   190-228   Classic zinc finger, C2H2  
F52E10.1   0.00000164   118-166   Classic zinc finger, C2H2  
  0.000501   267-293   Classic zinc finger, C2H2  
F52F12.4   4.41e-17   63-115   Classic zinc finger, C2H2  
  0.000000000141   36-74   Classic zinc finger, C2H2  
  0.00399   220-275   Classic zinc finger, C2H2  
F53B3.1   0.00000000812   440-490   Classic zinc finger, C2H2  
  0.000175   412-452   Classic zinc finger, C2H2  
  0.00411   328-355   Classic zinc finger, C2H2  
F53F8.1   0.0000000000000143   212-256   Classic zinc finger, C2H2  
  0.00000000011   245-281   Classic zinc finger, C2H2  
F53H10.2c   0.0000907   411-445   Classic zinc finger, C2H2  
F54H5.4a   0.0000000000000085   238-282   Classic zinc finger, C2H2  
  0.0000000000071   271-307   Classic zinc finger, C2H2  
F54H5.4b   0.0000000000000087   244-288   Classic zinc finger, C2H2  
  0.00000000000728   277-313   Classic zinc finger, C2H2  
F55C5.11   0.00000439   107-155   Classic zinc finger, C2H2  
F55H12.6a   0.0000455   243-291   Classic zinc finger, C2H2  
  0.00319   80-102   Classic zinc finger, C2H2  
F55H12.6b   0.000000464   8-50   Classic zinc finger, C2H2  
  0.0000513   223-271   Classic zinc finger, C2H2  
F55H12.6c   0.0000135   82-130   Classic zinc finger, C2H2  
F56D1.1   0.0000000292   405-448   Classic zinc finger, C2H2  
  0.00000156   74-112   Classic zinc finger, C2H2  
  0.000147   350-375   Classic zinc finger, C2H2  
F56F11.3.1   0.00000000000000183   428-472   Classic zinc finger, C2H2  
  0.0000000000607   461-496   Classic zinc finger, C2H2  
F56F11.3.2   0.00000000000000183   428-472   Classic zinc finger, C2H2  
  0.0000000000607   461-496   Classic zinc finger, C2H2  
F57C9.4b   1.1e-18   787-837   Classic zinc finger, C2H2  
  0.000119   830-852   Classic zinc finger, C2H2  
  0.00716   749-796   Classic zinc finger, C2H2  
F57C9.4c   4.97e-19   405-455   Classic zinc finger, C2H2  
  0.0000572   448-470   Classic zinc finger, C2H2  
  0.00299   367-414   Classic zinc finger, C2H2  
F58A4.11   0.000000476   197-243   Classic zinc finger, C2H2  
  0.00000262   428-474   Classic zinc finger, C2H2  
F58G1.2a.1   0.00000000982   342-394   Classic zinc finger, C2H2  
  0.000151   111-135,224-248   Classic zinc finger, C2H2  
  0.000355   305-353   Classic zinc finger, C2H2  
  0.082   390-420   Classic zinc finger, C2H2  
F58G1.2a.2   0.00000000982   342-394   Classic zinc finger, C2H2  
  0.000151   111-135,224-248   Classic zinc finger, C2H2  
  0.000355   305-353   Classic zinc finger, C2H2  
  0.082   390-420   Classic zinc finger, C2H2  
F58G1.2a.3   0.00000000982   342-394   Classic zinc finger, C2H2  
  0.000151   111-135,224-248   Classic zinc finger, C2H2  
  0.000355   305-353   Classic zinc finger, C2H2  
  0.082   390-420   Classic zinc finger, C2H2  
F58G1.2b   0.0000000113   397-449   Classic zinc finger, C2H2  
  0.000238   166-190,279-303   Classic zinc finger, C2H2  
  0.000518   360-408   Classic zinc finger, C2H2  
K02D7.2   6.31e-17   95-146   Classic zinc finger, C2H2  
  0.0000000416   133-174   Classic zinc finger, C2H2  
  0.0000000658   42-92   Classic zinc finger, C2H2  
K09A11.1   0.00000000345   4-53   BED zinc finger  
K10G6.3a   0.0000239   554-577,755-780   Classic zinc finger, C2H2  
  0.000588   1724-1752   Classic zinc finger, C2H2  
  0.00265   1174-1203   Classic zinc finger, C2H2  
  0.0246   317-340   Classic zinc finger, C2H2  
K10G6.3b   0.0000181   554-577,610-635   Classic zinc finger, C2H2  
  0.00248   1029-1058   Classic zinc finger, C2H2  
  0.0217   317-340   Classic zinc finger, C2H2  
K10G6.3c   0.000021   554-577,755-780   Classic zinc finger, C2H2  
  0.00243   1174-1203   Classic zinc finger, C2H2  
  0.0231   317-340   Classic zinc finger, C2H2  
K10G6.3d   0.0000168   312-335,513-538   Classic zinc finger, C2H2  
  0.0021   932-961   Classic zinc finger, C2H2  
  0.0196   75-98   Classic zinc finger, C2H2  
K11D12.12   0.0000115   130-181   Classic zinc finger, C2H2  
K11D2.4a   1.18e-16   269-321   Classic zinc finger, C2H2  
  0.000000000000597   233-284   Classic zinc finger, C2H2  
K11D2.4b   6.72e-17   105-163   Classic zinc finger, C2H2  
  0.000000000203   79-129   Classic zinc finger, C2H2  
  0.00000000328   152-186   Classic zinc finger, C2H2  
K11D2.4c   9.71e-17   195-247   Classic zinc finger, C2H2  
  0.00000000000044   159-210   Classic zinc finger, C2H2  
K11D2.4d   7.13e-17   27-85   Classic zinc finger, C2H2  
  0.000000000197   2-51   Classic zinc finger, C2H2  
  0.00000000215   74-108   Classic zinc finger, C2H2  
K11D2.4e   1.17e-16   257-309   Classic zinc finger, C2H2  
  0.000000000000576   221-272   Classic zinc finger, C2H2  
K11G9.4   0.0000038   181-230   Classic zinc finger, C2H2  
M03D4.4a   2.19e-16   125-181   Classic zinc finger, C2H2  
  0.0000000000000791   87-138   Classic zinc finger, C2H2  
  0.000000000168   166-217   Classic zinc finger, C2H2  
  0.00697   5-29   Classic zinc finger, C2H2  
  0.0325   322-348   Plant C2H2 finger (QALGGH zinc finger)  
M03D4.4b   1.65e-16   76-132   Classic zinc finger, C2H2  
  0.0000000000000701   38-89   Classic zinc finger, C2H2  
  0.0000000000333   117-168   Classic zinc finger, C2H2  
  0.0284   273-299   Plant C2H2 finger (QALGGH zinc finger)  
M163.2   0.00000000000000311   300-354   Classic zinc finger, C2H2  
  0.000000000943   264-313   Classic zinc finger, C2H2  
  0.0000721   348-373   Classic zinc finger, C2H2  
  0.0953   232-256   Classic zinc finger, C2H2  
R06C7.9a   0.0000266   204-241   Classic zinc finger, C2H2  
  0.0000317   466-513   Classic zinc finger, C2H2  
  0.00347   176-214   Classic zinc finger, C2H2  
  0.00545   630-680   Classic zinc finger, C2H2  
  0.00921   519-580   Classic zinc finger, C2H2  
R06C7.9b   0.000021   204-241   Classic zinc finger, C2H2  
  0.0000357   466-513   Classic zinc finger, C2H2  
  0.00264   176-214   Classic zinc finger, C2H2  
  0.00926   630-677   Plant C2H2 finger (QALGGH zinc finger)  
  0.0106   519-580   Classic zinc finger, C2H2  
R07E5.5   0.00000875   49-111   Classic zinc finger, C2H2  
R08E3.4a   0.00000000000083   132-183   Classic zinc finger, C2H2  
  0.0000837   195-243   Classic zinc finger, C2H2  
  0.00174   6-27,98-125   Classic zinc finger, C2H2  
R08E3.4b   0.000000000000856   132-183   Classic zinc finger, C2H2  
  0.000000964   421-467   Classic zinc finger, C2H2  
  0.0000797   170-232   Classic zinc finger, C2H2  
  0.00164   6-27,98-125   Classic zinc finger, C2H2  
R11E3.6a   0.000000000000207   622-674   Classic zinc finger, C2H2  
  0.000000000147   539-589   Classic zinc finger, C2H2  
  0.00000000501   480-531   Classic zinc finger, C2H2  
  0.00421   594-627   Classic zinc finger, C2H2  
R11E3.6b   0.0000000000000399   4-56   Classic zinc finger, C2H2  
R53.3a   6.56e-17   440-490   Classic zinc finger, C2H2  
  0.000000000011   159-209   Classic zinc finger, C2H2  
R53.3b   3.05e-17   219-269   Classic zinc finger, C2H2  
T03F6.2   0.0000000000417   305-355   Classic zinc finger, C2H2  
  0.0702   450-474   Classic zinc finger, C2H2  
T05A10.1a   0.000000000403   1270-1318   Classic zinc finger, C2H2  
  0.0000000101   1612-1641   Classic zinc finger, C2H2  
  0.000000797   1522-1576   Classic zinc finger, C2H2  
  0.0188   1963-1992   Classic zinc finger, C2H2  
T05A10.1c   0.000000000324   896-944   Classic zinc finger, C2H2  
  0.00000000791   1238-1267   Classic zinc finger, C2H2  
  0.000000742   1148-1202   Classic zinc finger, C2H2  
  0.0172   1590-1618   Classic zinc finger, C2H2  
T05A10.1d   0.000000000423   1338-1386   Classic zinc finger, C2H2  
  0.0000000105   1680-1709   Classic zinc finger, C2H2  
  0.000000833   1590-1644   Classic zinc finger, C2H2  
  0.0221   2032-2060   Classic zinc finger, C2H2  
T05A10.1e   0.000000000413   1338-1386   Classic zinc finger, C2H2  
  0.0000000103   1680-1709   Classic zinc finger, C2H2  
  0.000000815   1590-1644   Classic zinc finger, C2H2  
  0.019   1998-2027   Classic zinc finger, C2H2  
T05A10.1f   0.000000000403   1338-1386   Classic zinc finger, C2H2  
  0.0000000101   1680-1709   Classic zinc finger, C2H2  
  0.000000797   1590-1644   Classic zinc finger, C2H2  
  0.0186   1945-1974   Classic zinc finger, C2H2  
T05A10.1g.1   0.000000000361   1338-1386   Classic zinc finger, C2H2  
  0.00000000901   1680-1709   Classic zinc finger, C2H2  
  0.000000779   1590-1644   Classic zinc finger, C2H2  
T05A10.1g.2   0.000000000361   1338-1386   Classic zinc finger, C2H2  
  0.00000000901   1680-1709   Classic zinc finger, C2H2  
  0.000000779   1590-1644   Classic zinc finger, C2H2  
T05A10.1h   0.000000000979   13-41   Classic zinc finger, C2H2  
  0.00000000199   328-357   Classic zinc finger, C2H2  
  0.000000215   238-292   Classic zinc finger, C2H2  
T05A10.1i   0.000000000374   1338-1386   Classic zinc finger, C2H2  
  0.00000000934   1680-1709   Classic zinc finger, C2H2  
  0.000000797   1590-1644   Classic zinc finger, C2H2  
T05A10.1j   0.00000000039   1338-1386   Classic zinc finger, C2H2  
T05A10.1l   0.000000000423   1377-1425   Classic zinc finger, C2H2  
  0.0000000106   1719-1748   Classic zinc finger, C2H2  
  0.000000851   1629-1683   Classic zinc finger, C2H2  
  0.0221   2071-2099   Classic zinc finger, C2H2  
T05A10.1m   0.000000000446   1469-1517   Classic zinc finger, C2H2  
  0.0000000108   1811-1840   Classic zinc finger, C2H2  
  0.000000887   1721-1775   Classic zinc finger, C2H2  
  0.0243   2130-2158   Classic zinc finger, C2H2  
T06A10.3   0.00000988   19-46   CHHC finger  
  0.0131   55-84   CHHC finger  
T09F3.1   0.00000069   207-269   Classic zinc finger, C2H2  
T22B3.1   0.0000000547   141-188   BED zinc finger  
  0.000000286   354-399   Classic zinc finger, C2H2  
T22C8.3   0.0000000916   173-220   Classic zinc finger, C2H2  
T22C8.4   0.0000258   175-222   Classic zinc finger, C2H2  
T22C8.5   0.0000000000000011   91-142   Classic zinc finger, C2H2  
  0.0000578   137-160   Classic zinc finger, C2H2  
T27B1.2   0.00000000000000136   106-158   Classic zinc finger, C2H2  
  0.0000000369   81-115   Classic zinc finger, C2H2  
W03C9.4a   2.24e-19   189-247   Classic zinc finger, C2H2  
  0.0000000000102   141-189   Classic zinc finger, C2H2  
  0.00000000924   236-291   Classic zinc finger, C2H2  
W03C9.4b   2.24e-19   185-243   Classic zinc finger, C2H2  
  0.0000000000101   137-185   Classic zinc finger, C2H2  
  0.00000000854   232-287   Classic zinc finger, C2H2  
W03C9.4c   1.38e-19   47-105   Classic zinc finger, C2H2  
  0.0000000000285   5-47   Classic zinc finger, C2H2  
  0.00000000514   94-149   Classic zinc finger, C2H2  
W06H12.1   0.00000000525   387-434   Classic zinc finger, C2H2  
  0.0000373   358-387   Classic zinc finger, C2H2  
Y111B2A.10a   0.00000000413   356-406   Classic zinc finger, C2H2  
  0.0000000473   145-200   Classic zinc finger, C2H2  
  0.000624   185-244   Classic zinc finger, C2H2  
  0.0789   311-336   Classic zinc finger, C2H2  
Y111B2A.10b   0.00000000293   238-288   Classic zinc finger, C2H2  
  0.0000000268   27-82   Classic zinc finger, C2H2  
  0.000499   66-126   Classic zinc finger, C2H2  
  0.0521   193-218   Classic zinc finger, C2H2  
Y37E11B.1a.1   0.00000000171   6-52   Classic zinc finger, C2H2  
Y37E11B.1a.2   0.00000000171   6-52   Classic zinc finger, C2H2  
Y37E11B.1b   0.0000000000307   69-120   Classic zinc finger, C2H2  
  0.000000000228   13-63   Classic zinc finger, C2H2  
  0.0000000666   107-153   Classic zinc finger, C2H2  
Y38H8A.5   3.93e-20   61-117   Classic zinc finger, C2H2  
  1.19e-16   102-154   Classic zinc finger, C2H2  
  0.000000000000325   145-201   Classic zinc finger, C2H2  
Y39B6A.12a   0.0000000405   58-102   BED zinc finger  
Y39B6A.12b   0.0000000405   58-102   BED zinc finger  
Y40B1A.4   4.81e-19   325-383   Classic zinc finger, C2H2  
Y47D3A.6a   3.35e-18   255-316   Classic zinc finger, C2H2  
  0.00000000209   299-356   Classic zinc finger, C2H2  
  0.000000597   207-235   Classic zinc finger, C2H2  
Y47D3A.6b   0.000000298   207-235   Classic zinc finger, C2H2  
  0.000000428   243-272   Classic zinc finger, C2H2  
Y47D3B.9   0.00000333   353-399   Plant C2H2 finger (QALGGH zinc finger)  
  0.00179   187-232   Classic zinc finger, C2H2  
Y48G8AL.10   0.00000000000000223   900-958   Classic zinc finger, C2H2  
  0.000000000000198   862-914   Classic zinc finger, C2H2  
  0.00000211   444-511   Plant C2H2 finger (QALGGH zinc finger)  
  0.00000829   619-659   Plant C2H2 finger (QALGGH zinc finger)  
  0.0000655   321-366   Classic zinc finger, C2H2  
  0.0000706   285-314   Classic zinc finger, C2H2  
  0.000074   181-238   Classic zinc finger, C2H2  
  0.00714   1207-1243   Classic zinc finger, C2H2  
  0.00734   355-367,395-426   Classic zinc finger, C2H2  
  0.0294   131-154   Classic zinc finger, C2H2  
  0.0347   546-578   HkH motif-containing C2H2 finger  
  0.0476   752-776   Classic zinc finger, C2H2  
Y52B11A.9   0.0000115   26-60   Classic zinc finger, C2H2  
Y53H1A.2a   0.00000000887   137-186   Classic zinc finger, C2H2  
Y53H1A.2b   0.00000000918   140-189   Classic zinc finger, C2H2  
Y54E10BR.8   1.75e-19   286-343   Classic zinc finger, C2H2  
  0.000000000000125   249-299   Classic zinc finger, C2H2  
  0.00103   8-56   Classic zinc finger, C2H2  
Y55F3AM.14   5.47e-18   100-161   Classic zinc finger, C2H2  
  1.52e-16   272-324   Classic zinc finger, C2H2  
  0.0000000000081   241-283   Classic zinc finger, C2H2  
  0.00000000000856   356-403   Classic zinc finger, C2H2  
  0.00000000003   158-211   Classic zinc finger, C2H2  
  0.00000473   210-242   Classic zinc finger, C2H2  
  0.00243   414-441   Classic zinc finger, C2H2  
Y55F3AM.7a   7.78e-17   202-254   Classic zinc finger, C2H2  
  0.00000000000000728   169-217   Classic zinc finger, C2H2  
Y55F3AM.7b   3.24e-16   206-258   Classic zinc finger, C2H2  
  0.00000000000000772   169-217   Classic zinc finger, C2H2  
Y55F3AM.7c   1.42e-17   37-89   Classic zinc finger, C2H2  
  0.00000000000000164   5-52   Classic zinc finger, C2H2  
Y55F3AM.7d   1.94e-17   37-89   Classic zinc finger, C2H2  
  0.00000000000000184   5-52   Classic zinc finger, C2H2  
Y56A3A.18   8.03e-17   39-100   HkH motif-containing C2H2 finger  
Y56A3A.28   9.97e-19   221-271   Classic zinc finger, C2H2  
  0.0000862   263-289   Classic zinc finger, C2H2  
  0.0633   17-38   Classic zinc finger, C2H2  
Y59A8B.13a   0.0000000551   45-93   Plant C2H2 finger (QALGGH zinc finger)  
  0.0767   98-129   Classic zinc finger, C2H2  
Y59A8B.13b   0.0000000438   45-93   Plant C2H2 finger (QALGGH zinc finger)  
  0.0728   98-129   Classic zinc finger, C2H2  
Y59A8B.13c   0.0000000469   45-93   Plant C2H2 finger (QALGGH zinc finger)  
  0.0714   98-129   Classic zinc finger, C2H2  
Y59A8B.13d   0.0000000976   45-93   Plant C2H2 finger (QALGGH zinc finger)  
  0.0701   98-129   Classic zinc finger, C2H2  
Y5F2A.4   0.00000000000013   41-89   Classic zinc finger, C2H2  
  0.0000000242   160-207   Classic zinc finger, C2H2  
  0.00000632   3-52   Classic zinc finger, C2H2  
  0.000454   106-138   Classic zinc finger, C2H2  
Y67H2A.10a   0.000000452   154-177,266-291   Classic zinc finger, C2H2  
  0.000624   10-36   Classic zinc finger, C2H2  
Y67H2A.10b   0.000000452   154-177,266-291   Classic zinc finger, C2H2  
  0.000624   10-36   Classic zinc finger, C2H2  
Y6G8.3   0.0000362   25-72   Classic zinc finger, C2H2  
  0.00724   80-103   Classic zinc finger, C2H2  
Y94H6A.11a   0.00000000000106   147-201   Classic zinc finger, C2H2  
  0.000825   194-226   Classic zinc finger, C2H2  
Y95B8A.8   0.00000000153   117-159   Classic zinc finger, C2H2  
  0.0000000465   312-361   HkH motif-containing C2H2 finger  
  0.00000119   167-204   Classic zinc finger, C2H2  
ZC123.3   0.00000000209   1359-1396   HkH motif-containing C2H2 finger  
  0.0000535   155-179   Classic zinc finger, C2H2  
  0.000113   418-459   Classic zinc finger, C2H2  
  0.000369   517-557   Classic zinc finger, C2H2  
  0.000371   470-511   HkH motif-containing C2H2 finger  
  0.00573   245-285   Classic zinc finger, C2H2  
  0.1   101-126   Classic zinc finger, C2H2  
ZC328.2   8.39e-17   246-303   Classic zinc finger, C2H2  
  0.00000367   293-325   Classic zinc finger, C2H2  
ZC395.6   0.0000000635   392-425   Classic zinc finger, C2H2  
ZK177.3   0.0000314   7-59   Classic zinc finger, C2H2  
ZK337.2   1.28e-16   367-419   Classic zinc finger, C2H2  
  0.0000000000127   405-448   Classic zinc finger, C2H2  
  0.00172   330-357   Classic zinc finger, C2H2  
ZK546.5   0.0000387   274-321   Classic zinc finger, C2H2  
ZK616.10a   0.0000000000316   3-52   Classic zinc finger, C2H2  
  0.00000165   208-255   Classic zinc finger, C2H2  
  0.000355   87-117   Classic zinc finger, C2H2  
  0.0369   39-82   Classic zinc finger, C2H2  
ZK616.10b   0.00000119   164-211   Classic zinc finger, C2H2  
  0.000294   43-73   Classic zinc finger, C2H2  
  0.00579   3-36   Classic zinc finger, C2H2  
ZK616.10c   0.00000074   121-168   Classic zinc finger, C2H2  
  0.000212   43-73   Classic zinc finger, C2H2  
  0.00409   3-36   Classic zinc finger, C2H2  
ZK686.4   0.0000000021   85-128   HkH motif-containing C2H2 finger  
ZK686.5   0.000000341   111-160   Classic zinc finger, C2H2  
  0.000017   147-192   Classic zinc finger, C2H2  
ZK867.1c   0.0000000000000167   46-98   Classic zinc finger, C2H2  
  0.00000000709   13-57   Classic zinc finger, C2H2  
  0.019   367-393   Classic zinc finger, C2H2  
ZK867.1d   0.0000000000000137   63-115   Classic zinc finger, C2H2  
  0.00000362   13-74   Classic zinc finger, C2H2  
  0.0163   384-410   Classic zinc finger, C2H2  
 
Weak hits:
2L52.1   0.0333   18-47   Classic zinc finger, C2H2  
B0035.1a   0.0113   5-33   Classic zinc finger, C2H2  
B0035.1b   0.00291   5-33   Classic zinc finger, C2H2  
C01B7.1a.1   0.00863   558-615   Classic zinc finger, C2H2  
  0.0754   86-127   Classic zinc finger, C2H2  
C01B7.1a.2   0.00863   558-615   Classic zinc finger, C2H2  
  0.0754   86-127   Classic zinc finger, C2H2  
C01B7.1b.1   0.0334   444-469   Classic zinc finger, C2H2  
  0.0385   86-127   Classic zinc finger, C2H2  
  0.0486   121-148   Classic zinc finger, C2H2  
C01B7.1b.2   0.0334   444-469   Classic zinc finger, C2H2  
  0.0385   86-127   Classic zinc finger, C2H2  
  0.0486   121-148   Classic zinc finger, C2H2  
C01B7.1c.1   0.00873   563-620   Classic zinc finger, C2H2  
  0.0754   86-127   Classic zinc finger, C2H2  
C01B7.1c.2   0.00873   563-620   Classic zinc finger, C2H2  
  0.0754   86-127   Classic zinc finger, C2H2  
C01B7.1d.1   0.00844   541-598   Classic zinc finger, C2H2  
  0.0714   86-127   Classic zinc finger, C2H2  
C01B7.1d.2   0.00844   541-598   Classic zinc finger, C2H2  
  0.0714   86-127   Classic zinc finger, C2H2  
C06E2.1   0.0635   176-208   Classic zinc finger, C2H2  
C07A12.1c   0.00239   3-31   Classic zinc finger, C2H2  
C07A12.5a   0.000505   244-284   Classic zinc finger, C2H2  
  0.00234   20-44   Classic zinc finger, C2H2  
C07A12.5b   0.000424   244-284   Classic zinc finger, C2H2  
  0.00128   18-66   Classic zinc finger, C2H2  
  0.0824   122-161   Classic zinc finger, C2H2  
C08B11.3   0.0117   945-972   Classic zinc finger, C2H2  
C09F5.3   0.000341   76-141   Classic zinc finger, C2H2  
C26C6.1a   0.0132   1531-1557   Classic zinc finger, C2H2  
C26C6.1b.1   0.00374   161-187   Classic zinc finger, C2H2  
C26C6.1b.2   0.00374   161-187   Classic zinc finger, C2H2  
C27A12.4   0.00724   49-87   Classic zinc finger, C2H2  
C28G1.4   0.00181   799-855   Classic zinc finger, C2H2  
  0.00296   929-979   Classic zinc finger, C2H2  
C28H8.9a   0.000681   211-236   Classic zinc finger, C2H2  
C33D9.3a   0.022   247-273   Classic zinc finger, C2H2  
C33D9.3b.1   0.0215   244-270   Classic zinc finger, C2H2  
C33D9.3b.2   0.0215   244-270   Classic zinc finger, C2H2  
C34H4.5a.1   0.000164   80-126   Classic zinc finger, C2H2  
  0.00545   22-48   Classic zinc finger, C2H2  
C34H4.5a.2   0.000164   80-126   Classic zinc finger, C2H2  
  0.00545   22-48   Classic zinc finger, C2H2  
C37A2.5a   0.000683   412-438   Classic zinc finger, C2H2  
C37A2.5b   0.000699   430-456   Classic zinc finger, C2H2  
C37A2.5c   0.000675   273-299   Classic zinc finger, C2H2  
C37A2.5d   0.000486   124-150   Classic zinc finger, C2H2  
C38D4.7   0.0893   237-271   Classic zinc finger, C2H2  
D1046.2.1   0.0434   120-142   Classic zinc finger, C2H2  
D1046.2.2   0.0434   120-142   Classic zinc finger, C2H2  
D2030.7   0.00276   353-379   Classic zinc finger, C2H2  
D2092.10   0.00187   32-89   Classic zinc finger, C2H2  
EGAP9.4   0.0754   70-92   Classic zinc finger, C2H2  
F18A1.2a.1   0.00298   300-337   Classic zinc finger, C2H2  
F18A1.2a.2   0.00298   300-337   Classic zinc finger, C2H2  
F18A1.2b.1   0.00545   300-337   Classic zinc finger, C2H2  
F18A1.2b.2   0.00545   300-337   Classic zinc finger, C2H2  
F18A1.2c   0.00337   332-375   Classic zinc finger, C2H2  
F18A1.3a   0.00266   179-213   Classic zinc finger, C2H2  
F18A1.3b   0.00282   179-213   Classic zinc finger, C2H2  
F18A1.3c   0.00123   179-213   Classic zinc finger, C2H2  
F18A1.3d   0.00266   179-213   Classic zinc finger, C2H2  
F18A1.3e   0.00123   119-153   Classic zinc finger, C2H2  
F18A1.3f   0.00111   119-153   Classic zinc finger, C2H2  
F18A1.3g   0.000436   24-58   Classic zinc finger, C2H2  
F18A1.3h   0.000833   24-58   Classic zinc finger, C2H2  
F18A1.3i   0.00266   179-213   Classic zinc finger, C2H2  
F18A1.3j   0.00111   119-153   Classic zinc finger, C2H2  
F18A1.3k   0.000436   24-58   Classic zinc finger, C2H2  
F18A1.3l   0.0027   179-213   Classic zinc finger, C2H2  
F18A1.3m   0.00119   119-153   Classic zinc finger, C2H2  
F18A1.3n   0.000555   24-58   Classic zinc finger, C2H2  
F18A1.4a   0.000595   455-511   Classic zinc finger, C2H2  
F18A1.4b   0.000674   389-445   Classic zinc finger, C2H2  
F21D5.9   0.00205   150-176   Classic zinc finger, C2H2  
F27D4.6b   0.0357   1150-1189   HkH motif-containing C2H2 finger  
F34D10.4   0.0289   40-75   Classic zinc finger, C2H2  
F37B4.10   0.0774   50-75   Classic zinc finger, C2H2  
F37H8.1   0.000109   189-248   Classic zinc finger, C2H2  
F44E2.7a   0.00559   14-45   Classic zinc finger, C2H2  
F44E2.7d   0.00559   14-45   Classic zinc finger, C2H2  
F48F7.5   0.0142   31-57   Classic zinc finger, C2H2  
F53H10.2a   0.000157   731-764   Classic zinc finger, C2H2  
F53H10.2b   0.000111   507-540   Classic zinc finger, C2H2  
F53H10.2d   0.000106   488-521   Classic zinc finger, C2H2  
F54F2.5a   0.00201   241-290   Classic zinc finger, C2H2  
  0.017   99-123   Classic zinc finger, C2H2  
F56G4.4   0.00173   8-53   HkH motif-containing C2H2 finger  
F57G12.2b   0.0822   233-258   Classic zinc finger, C2H2  
F58D12.5   0.00797   49-82   Classic zinc finger, C2H2  
F59B2.14   0.000473   42-67   Classic zinc finger, C2H2  
  0.0155   70-118   Classic zinc finger, C2H2  
H16D19.3   0.00571   155-186   Classic zinc finger, C2H2  
K09H9.7   0.000206   96-134   Classic zinc finger, C2H2  
K10B3.5   0.000437   322-371   Classic zinc finger, C2H2  
K10D2.3   0.000405   268-303   Classic zinc finger, C2H2  
K10G6.3e   0.00104   403-432   Classic zinc finger, C2H2  
K12H6.12   0.0852   155-195   Classic zinc finger, C2H2  
  0.0923   328-353   Classic zinc finger, C2H2  
M04B2.1   0.00373   712-773   Classic zinc finger, C2H2  
  0.00456   824-869   Classic zinc finger, C2H2  
M04G12.4a   0.0119   450-485   Classic zinc finger, C2H2  
M04G12.4b.1   0.0108   421-456   Classic zinc finger, C2H2  
M04G12.4b.2   0.0108   421-456   Classic zinc finger, C2H2  
R05D3.3.1   0.000202   216-259   Classic zinc finger, C2H2  
R05D3.3.2   0.000202   216-259   Classic zinc finger, C2H2  
R10E4.11a   0.00192   258-325   Classic zinc finger, C2H2  
R10E4.11b   0.000763   34-101   Classic zinc finger, C2H2  
R10E4.11c   0.000385   225-281   Classic zinc finger, C2H2  
T03G11.3   0.0176   10-34   Classic zinc finger, C2H2  
T04A8.10   0.000754   10-47   HkH motif-containing C2H2 finger  
T04H1.5   0.0476   254-279   Classic zinc finger, C2H2  
T05G11.1a   0.000177   13-59   Classic zinc finger, C2H2  
  0.000245   334-418   Classic zinc finger, C2H2  
  0.000847   176-213   Classic zinc finger, C2H2  
  0.00194   203-259   Classic zinc finger, C2H2  
  0.0192   310-343   Classic zinc finger, C2H2  
T05G11.1b   0.000294   299-383   Classic zinc finger, C2H2  
  0.00105   141-178   Classic zinc finger, C2H2  
  0.00189   168-222   Classic zinc finger, C2H2  
  0.00243   3-42   Classic zinc finger, C2H2  
  0.0239   275-308   Classic zinc finger, C2H2  
T07D10.3   0.00112   230-261   Classic zinc finger, C2H2  
  0.00548   151-182   Classic zinc finger, C2H2  
T07G12.10   0.00575   493-534   Classic zinc finger, C2H2  
T07G12.11   0.0464   460-502   Classic zinc finger, C2H2  
T07G12.6a   0.0226   494-520   Classic zinc finger, C2H2  
T07G12.6b   0.0226   494-520   Classic zinc finger, C2H2  
T07G12.6c   0.00425   112-138   Classic zinc finger, C2H2  
T07G12.6d   0.00408   112-138   Classic zinc finger, C2H2  
T08B2.5a   0.0493   739-776   Classic zinc finger, C2H2  
T08B2.5b   0.0493   740-777   Classic zinc finger, C2H2  
T08B2.5c   0.0459   681-718   Classic zinc finger, C2H2  
T08B2.5f   0.0442   653-690   Classic zinc finger, C2H2  
T08B2.5g   0.0397   510-548   Classic zinc finger, C2H2  
T08G5.7   0.00797   49-82   Classic zinc finger, C2H2  
T09A5.12.1   0.0687   268-294   Classic zinc finger, C2H2  
T09A5.12.2   0.0687   268-294   Classic zinc finger, C2H2  
T10B5.10   0.00167   35-78   Classic zinc finger, C2H2  
T20F7.1   0.0102   274-295   Classic zinc finger, C2H2  
T20H4.2   0.00153   128-170   Classic zinc finger, C2H2  
  0.0212   161-204   Classic zinc finger, C2H2  
T23F11.4   0.000319   211-258   Classic zinc finger, C2H2  
W02D7.6   0.0155   55-79,122-149   HkH motif-containing C2H2 finger  
  0.0884   6-30   Classic zinc finger, C2H2  
W03F9.2a   0.000732   66-100   Classic zinc finger, C2H2  
W04D2.4   0.0417   63-110   Classic zinc finger, C2H2  
Y105C5A.15b   0.00988   151-195   Classic zinc finger, C2H2  
Y105E8A.21a   0.0953   89-114   Classic zinc finger, C2H2  
Y14H12B.1a   0.0102   24-53   Classic zinc finger, C2H2  
Y17G7B.22   0.00047   64-121   Classic zinc finger, C2H2  
Y20F4.4   0.0204   41-75   Classic zinc finger, C2H2  
Y22D7AL.16   0.000268   60-95   Classic zinc finger, C2H2  
  0.000286   84-131   Classic zinc finger, C2H2  
Y37F4.6a   0.00215   221-246   Classic zinc finger, C2H2  
  0.00258   61-99   Classic zinc finger, C2H2  
  0.0375   151-180   Classic zinc finger, C2H2  
Y37F4.6b   0.00349   187-225   Classic zinc finger, C2H2  
  0.00378   347-372   Classic zinc finger, C2H2  
  0.0728   277-306   Classic zinc finger, C2H2  
Y39B6A.46   0.00124   107-144   Classic zinc finger, C2H2  
  0.0794   175-199   Classic zinc finger, C2H2  
Y48C3A.4   0.00476   258-309   Classic zinc finger, C2H2  
Y48G1BM.8   0.00976   61-110   Classic zinc finger, C2H2  
Y48G9A.11   0.0212   90-113   Classic zinc finger, C2H2  
Y49A3A.3   0.00214   50-80   CHHC finger  
Y51H1A.6a   0.00337   255-283   Classic zinc finger, C2H2  
Y53F4B.5   0.00111   53-84   Plant C2H2 finger (QALGGH zinc finger)  
Y66D12A.12   0.00738   18-64   Classic zinc finger, C2H2  
  0.0338   67-95   Classic zinc finger, C2H2  
Y71A12B.8   0.0251   225-249,446-470   Classic zinc finger, C2H2  
Y73F8A.33   0.075   155-180   Classic zinc finger, C2H2  
Y79H2A.3a   0.000674   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3b   0.000353   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3c   0.000349   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3d   0.000674   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3e   0.000674   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3f   0.000516   13-44   HkH motif-containing C2H2 finger  
Y79H2A.3g   0.0913   137-169   Classic zinc finger, C2H2  
ZC395.8   0.000242   18-55   Classic zinc finger, C2H2  
  0.00218   324-356   Classic zinc finger, C2H2  
ZK673.4   0.0069   6-51   Classic zinc finger, C2H2  
ZK867.1a   0.0303   289-315   Classic zinc finger, C2H2  
ZK867.1b   0.00725   67-93   Classic zinc finger, C2H2  
ZK892.7   0.00473   13-44   Classic zinc finger, C2H2  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a beta-beta-alpha zinc fingers domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   3000708 3000708
No Yes Homo sapiens 76_38 Human 10873 2243
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 3948 743
No Yes Gorilla gorilla 76_3.1 Western gorilla 4906 944
No Yes Pongo abelii 76_2 Sumatran orangutan 3610 708
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 4053 744
No Yes Papio anubis 76 Olive baboon 4383 764
No Yes Macaca mulatta 76_1 Rhesus monkey 6298 1208
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7038 1369
No Yes Otolemur garnettii 76_3 Small-eared galago 3626 651
No Yes Microcebus murinus 76_1 Gray mouse lemur 2020 471
No Yes Rattus norvegicus 76_5.0 Norway rat 2770 620
No Yes Mus musculus 76_38 House mouse 6284 1346
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1411 357
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1796 442
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2928 594
No Yes Cavia porcellus 76_3 Domestic guinea pig 1518 400
No Yes Oryctolagus cuniculus 76_2 Rabbit 2337 510
No Yes Ochotona princeps 76 American pika 1450 368
No Yes Tupaia belangeri 76 Northern tree shrew 1530 376
No Yes Sus scrofa 76_10.2 Pig 2758 594
No Yes Bos taurus 76_3.1 Cattle 3268 640
No Yes Ovis aries 76_3.1 Sheep 2282 526
No Yes Vicugna pacos 76_1 Alpaca 1376 329
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2473 538
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2547 539
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2526 567
No Yes Canis familiaris 76_3.1 Dog 3120 672
No Yes Felis catus 76_6.2 Domestic cat 2017 478
No Yes Equus caballus 76_2 Horse 3828 689
No Yes Myotis lucifugus 76_2.0 Little brown bat 1720 443
No Yes Pteropus vampyrus 76_1 Large flying fox 2124 485
No Yes Sorex araneus 76_1 European shrew 1119 297
No Yes Erinaceus europaeus 76 Western European hedgehog 1184 323
No Yes Procavia capensis 76_1 Cape rock hyrax 1899 453
No Yes Loxodonta africana 76_3 African savanna elephant 2079 535
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1956 469
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4229 826
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1666 390
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1226 323
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3509 629
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6103 870
No Yes Ornithorhynchus anatinus 76_5 Platypus 1093 325
No Yes Saccoglossus kowalevskii v3.0   2230 518
No Yes Petromyzon marinus 76_7.0 Sea lamprey 620 197
No Yes Meleagris gallopavo 76_2 Turkey 877 272
No Yes Gallus gallus 76_4 Chicken 963 283
No Yes Anas platyrhynchos 76_1.0 Mallard 860 264
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2478 613
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 788 256
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2607 536
No Yes Anolis carolinensis 76_2.0 Green anole 6509 851
No Yes Xenopus laevis African clawed frog 2006 610
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2705 537
No Yes Latimeria chalumnae 76_1 Coelacanth 1231 376
No Yes Lepisosteus oculatus 76 Spotted gar 1510 417
No Yes Gadus morhua 76_1 Atlantic cod 1205 395
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1265 404
No Yes Takifugu rubripes 76_4 Torafugu 4079 996
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1529 424
No Yes Oryzias latipes 76_1 Japanese medaka 1745 451
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1689 455
No Yes Poecilia formosa 76 Amazon molly 2634 511
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2923 633
No Yes Astyanax mexicanus 76 Mexican tetra 2780 539
No Yes Danio rerio 76_9 Zebrafish 9699 1867
No Yes Oikopleura dioica   259 153
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1494 215
No Yes Ciona intestinalis 76 Vase tunicate 387 143
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1624 331
No Yes Adineta vaga   441 215
No Yes Octopus bimaculoides 280   12514 2144
No Yes Crassostrea gigas 22 Pacific oyster 814 264
No Yes Lottia gigantea Owl limpet 1476 356
No Yes Helobdella robusta   593 283
No Yes Capitella sp. I   1159 377
No Yes Danaus plexippus OGS1.0 Monarch butterfly 996 303
No Yes Heliconius melpomene Postman butterfly 803 260
No Yes Bombyx mori Domestic silkworm 745 318
No Yes Nasonia vitripennis Jewel wasp 374 127
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1273 373
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 250 149
No Yes Linepithema humile v1.1 Argentine ant 682 272
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 706 274
No Yes Solenopsis invicta v.2.2.3 Red fire ant 641 243
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 683 221
No Yes Atta cephalotes v1.1   744 287
No Yes Camponotus floridanus v3.3 Florida carpenter ant 548 215
No Yes Lucilia cuprina Australian sheep blowfly 1068 252
No Yes Drosophila grimshawi 1.3   836 291
No Yes Drosophila willistoni 1.3   765 271
No Yes Drosophila pseudoobscura 2.13   866 305
No Yes Drosophila persimilis 1.3   815 288
No Yes Drosophila suzukii   1012 290
No Yes Drosophila yakuba 1.3   852 292
No Yes Drosophila simulans 1.3   705 263
No Yes Drosophila sechellia 1.3   814 293
No Yes Drosophila melanogaster 76_5 Fruit fly 1591 560
No Yes Drosophila erecta 1.3   844 289
No Yes Drosophila ananassae 1.3   782 271
No Yes Drosophila virilis 1.2   912 300
No Yes Drosophila mojavensis 1.3   811 278
No Yes Megaselia scalaris 22   261 128
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2227 637
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2138 691
No Yes Anopheles darlingi 22 American malaria mosquito 591 220
No Yes Anopheles gambiae 49_3j African malaria mosquito 908 311
No Yes Tribolium castaneum 3.0 Red flour beetle 1062 291
No Yes Pediculus humanus corporis (Early assembly) Human body louse 782 217
No Yes Acyrthosiphon pisum Pea aphid 966 215
No Yes Rhodnius prolixus 22   694 240
No Yes Daphnia pulex Common water flea 480 204
No Yes Strigamia maritima 22   581 201
No Yes Sarcoptes scabiei   196 88
No Yes Tetranychus urticae Two-spotted spider mite 317 146
No Yes Ixodes scapularis (Preliminary) Black-legged tick 777 296
No Yes Pristionchus pacificus   322 194
No Yes Meloidogyne incognita Southern root-knot nematode 238 167
No Yes Meloidogyne hapla   113 76
No Yes Onchocerca volvulus 22   236 112
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 308 159
No Yes Caenorhabditis japonica   207 118
No Yes Caenorhabditis brenneri   324 168
No Yes Caenorhabditis remanei   325 183
No Yes Caenorhabditis elegans 76_235 Roundworm 352 190
No Yes Caenorhabditis briggsae 2   257 139
No Yes Trichinella spiralis 22   187 93
No Yes Hymenolepis microstoma   273 149
No Yes Echinococcus multilocularis   244 122
No Yes Echinococcus granulosus   233 120
No Yes Taenia solium Pork tapeworm 246 133
No Yes Schistosoma mansoni   290 139
No Yes Mnemiopsis leidyi Sea walnut 474 187
No Yes Thelohanellus kitauei   64 46
No Yes Acropora digitifera v1.0   307 114
No Yes Nematostella vectensis 1.0 Starlet sea anemone 880 236
No Yes Hydra vulgaris   350 150
No Yes Amphimedon queenslandica   162 112
No Yes Trichoplax adhaerens   114 62
No Yes Proterospongia sp. ATCC 50818   92 53
No Yes Monosiga brevicollis   54 45
No Yes Sphaeroforma arctica JP610   233 90
No Yes Capsaspora owczarzaki ATCC 30864   57 33
No Yes Conidiobolus coronatus NRRL28638 v1.0   98 80
No Yes Mortierella verticillata NRRL 6337   151 92
No Yes Phycomyces blakesleeanus   191 148
No Yes Rhizopus oryzae RA 99-880   170 116
No Yes Mucor circinelloides   162 115
No Yes Rhizomucor miehei CAU432   132 92
No Yes Malassezia globosa CBS 7966   64 48
No Yes Sporisorium reilianum 22   54 38
No Yes Ustilago maydis   49 34
No Yes Mixia osmundae IAM 14324 v1.0   48 37
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   60 50
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   93 80
No Yes Melampsora laricis-populina   71 60
No Yes Rhodotorula graminis WP1 v1.0   56 36
No Yes Sporobolomyces roseus IAM 13481   29 24
No Yes Microbotryum violaceum 22   55 40
No Yes Wallemia sebi v1.0   43 34
No Yes Sphaerobolus stellatus v1.0   154 130
No Yes Piloderma croceum F 1598 v1.0   79 61
No Yes Serpula lacrymans var. lacrymans S7.9   42 32
No Yes Coniophora puteana   55 47
No Yes Hydnomerulius pinastri v2.0   71 53
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   67 54
No Yes Pisolithus microcarpus 441 v1.0   81 63
No Yes Pisolithus tinctorius Marx 270 v1.0   78 62
No Yes Scleroderma citrinum Foug A v1.0   89 71
No Yes Coprinopsis cinerea okayama7 130 v3   85 60
No Yes Pleurotus ostreatus Oyster mushroom 73 62
No Yes Amanita thiersii Skay4041 v1.0   66 48
No Yes Amanita muscaria Koide v1.0 Fly agaric 100 79
No Yes Galerina marginata v1.0   74 57
No Yes Hebeloma cylindrosporum h7 v2.0   71 56
No Yes Laccaria bicolor S238N-H82   75 58
No Yes Agaricus bisporus var. bisporus   57 44
No Yes Schizophyllum commune   101 88
No Yes Stereum hirsutum FP-91666 SS1 v1.0   73 56
No Yes Heterobasidion annosum   96 77
No Yes Gloeophyllum trabeumv1.0   67 51
No Yes Punctularia strigosozonata v1.0   82 67
No Yes Sebacina vermifera MAFF 305830 v1.0   121 100
No Yes Fomitiporia mediterranea v1.0   75 58
No Yes Tulasnella calospora AL13/4D v1.0   77 67
No Yes Postia placenta   131 103
No Yes Wolfiporia cocos MD-104 SS10 v1.0   73 57
No Yes Fomitopsis pinicolav1.0   80 63
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   82 66
No Yes Phanerochaete chrysosporium RP-78 2.1   56 43
No Yes Dichomitus squalens   73 57
No Yes Trametes versicolor v1.0   68 52
No Yes Tremella mesenterica Witches' butter 44 33
No Yes Daldinia eschscholzii EC12 v1.0   75 62
No Yes Apiospora montagnei NRRL 25634 v1.0   95 79
No Yes Magnaporthe poae ATCC 64411 22   64 51
No Yes Magnaporthe grisea 70-15   68 53
No Yes Podospora anserina   71 55
No Yes Sporotrichum thermophile ATCC 42464   61 51
No Yes Thielavia terrestris NRRL 8126   75 63
No Yes Chaetomium globosum CBS 148.51   58 51
No Yes Neurospora tetrasperma   76 60
No Yes Neurospora discreta FGSC 8579   78 60
No Yes Neurospora crassa OR74A   77 62
No Yes Cryphonectria parasitica Chestnut blight fungus 69 55
No Yes Verticillium albo-atrum VaMs.102   52 43
No Yes Verticillium dahliae VdLs.17   67 56
No Yes Acremonium alcalophilumv 1.0   61 49
No Yes Glomerella graminicola 22   79 61
No Yes Fusarium graminearum   76 59
No Yes Nectria haematococca mpVI   94 75
No Yes Fusarium oxysporum f. sp. lycopersici 4286   89 69
No Yes Fusarium verticillioides 7600   68 56
No Yes Trichoderma asperellum CBS 433.97 v1.0   74 62
No Yes Trichoderma atroviride   73 57
No Yes Trichoderma citrinoviride v1.0   67 52
No Yes Trichoderma reesei 1.2   68 51
No Yes Trichoderma virens Gv29-8   84 63
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   70 54
No Yes Trichoderma harzianum CBS 226.95 v1.0   90 75
No Yes Amorphotheca resinae v1.0 Creosote fungus 63 51
No Yes Botrytis cinerea B05.10   55 45
No Yes Sclerotinia sclerotiorum   69 56
No Yes Blumeria graminis 22   47 36
No Yes Didymella exigua CBS 183.55 v1.0   72 61
No Yes Leptosphaeria maculans 22   58 49
No Yes Setosphaeria turcica v1.0   74 59
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   77 63
No Yes Cochliobolus victoriae FI3 v1.0   80 64
No Yes Cochliobolus carbonum 26-R-13 v1.0   79 64
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 63 51
No Yes Alternaria brassicicola   52 45
No Yes Cochliobolus lunatus m118 v2.0   71 57
No Yes Pyrenophora teres f. teres 22   67 55
No Yes Pyrenophora tritici-repentis   74 56
No Yes Stagonospora nodorum   72 62
No Yes Mycosphaerella graminicola IPO323   60 50
No Yes Zasmidium cellare ATCC 36951 v1.0   93 80
No Yes Dothistroma septosporum   80 70
No Yes Septoria musiva v1.0   68 55
No Yes Mycosphaerella fijiensis CIRAD86   67 56
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   73 62
No Yes Paracoccidioides brasiliensis Pb18   52 41
No Yes Coccidioides posadasii RMSCC 3488   62 47
No Yes Coccidioides immitis RS   73 57
No Yes Ajellomyces dermatitidis SLH14081   60 48
No Yes Histoplasma capsulatum class NAmI strain WU24   55 43
No Yes Microsporum canis CBS 113480   53 39
No Yes Trichophyton equinum CBS 127.97   63 47
No Yes Trichophyton verrucosum HKI 0517   46 37
No Yes Arthroderma benhamiae CBS 112371   45 36
No Yes Trichophyton tonsurans CBS 112818   63 47
No Yes Trichophyton rubrum CBS 118892   62 48
No Yes Uncinocarpus reesii 1704   50 46
No Yes Aspergillus zonatus v1.0   75 60
No Yes Penicillium chrysogenum Wisconsin 54-1255   105 88
No Yes Penicillium chrysogenum v1.0   89 74
No Yes Aspergillus acidus v1.0   94 78
No Yes Aspergillus fumigatus Af293   70 54
No Yes Aspergillus brasiliensis v1.0   97 82
No Yes Aspergillus nidulans FGSC A4   75 60
No Yes Aspergillus sydowii v1.0   116 97
No Yes Aspergillus versicolor v1.0   121 102
No Yes Aspergillus glaucus   82 69
No Yes Aspergillus carbonarius ITEM 5010   74 60
No Yes Neosartorya fischeri NRRL 181   76 62
No Yes Aspergillus terreus NIH2624   68 57
No Yes Aspergillus tubingensis v1.0   81 68
No Yes Aspergillus wentii v1.0   88 74
No Yes Aspergillus oryzae RIB40   46 38
No Yes Aspergillus niger 22   80 66
No Yes Aspergillus niger ATCC 1015   53 42
No Yes Aspergillus flavus NRRL3357   60 51
No Yes Aspergillus clavatus NRRL 1   69 56
No Yes Penicillium marneffei ATCC 18224   83 63
No Yes Tuber melanosporum Mel28 22   61 48
No Yes Tuber melanosporum Vittad Perigord truffle 64 51
No Yes Hansenula polymorpha v2.0   51 40
No Yes Dekkera bruxellensis CBS 2499 v2.0   47 37
No Yes Pichia membranifaciensv1.0   52 42
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   49 40
No Yes Candida dubliniensis CD36   51 40
No Yes Candida tropicalis MYA-3404   51 38
No Yes Candida parapsilosis   50 39
No Yes Candida albicans SC5314   51 40
No Yes Lodderomyces elongisporus NRRL YB-4239   49 38
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   55 44
No Yes Pichia stipitis CBS 6054   51 41
No Yes Candida guilliermondii ATCC 6260   49 40
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   45 38
No Yes Debaromyces hansenii   50 42
No Yes Wickerhamomyces anomalus   59 45
No Yes Pichia pastoris GS115   47 36
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   36 32
No Yes Yarrowia lipolytica CLIB122   50 40
No Yes Candida lusitaniae ATCC 42720   43 35
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   55 40
No Yes Vanderwaltozyma polyspora DSM 70294   55 46
No Yes Candida glabrata CBS138   62 50
No Yes Kluyveromyces thermotolerans CBS 6340   44 35
No Yes Lachancea kluyveri   58 43
No Yes Kluyveromyces waltii   48 37
No Yes Ashbya gossypii ATCC 10895   48 40
No Yes Zygosaccharomyces rouxii   39 29
No Yes Saccharomyces mikatae MIT   53 43
No Yes Saccharomyces paradoxus MIT   54 44
No Yes Saccharomyces cerevisiae 76 Baker's yeast 55 44
No Yes Saccharomyces bayanus MIT   47 42
No Yes Kluyveromyces lactis   45 35
No Yes Schizosaccharomyces cryophilus OY26 22   32 24
No Yes Schizosaccharomyces octosporus yFS286   31 23
No Yes Schizosaccharomyces japonicus yFS275   33 24
No Yes Schizosaccharomyces pombe Fission yeast 34 27
No Yes Catenaria anguillulae PL171 v1.0   59 43
No Yes Allomyces macrogynus ATCC 38327   132 85
No Yes Spizellomyces punctatus DAOM BR117   100 69
No Yes Dictyostelium discoideum   26 20
No Yes Dictyostelium purpureum   22 17
No Yes Entamoeba dispar 1.2   21 13
No Yes Entamoeba invadens 1.2   18 13
No Yes Entamoeba histolytica 1   28 17
No Yes Selaginella moellendorffii   110 82
No Yes Pinus taeda Loblolly pine 84 59
No Yes Picea abies Norway spruce 81 63
No Yes Eucalyptus grandis v201 Rose gum 179 138
No Yes Theobroma cacao B97-61/B2 v1 Cacao 184 157
No Yes Gossypium raimondii v221   401 308
No Yes Citrus clementina v165   221 150
No Yes Citrus sinensis v154 Sweet orange 197 153
No Yes Thellungiella halophila v173   153 121
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 236 197
No Yes Capsella rubella v183   166 135
No Yes Arabidopsis lyrata Lyrate rockcress 163 133
No Yes Arabidopsis thaliana 10 Thale cress 178 136
No Yes Carica papaya Papaya 113 90
No Yes Medicago truncatula Barrel medic 167 129
No Yes Phaseolus vulgaris v186 French bean 220 180
No Yes Glycine max v109 Soybean 327 277
No Yes Cucumis sativus v122 Cucumber 152 129
No Yes Fragaria vesca Wild strawberry 172 136
No Yes Malus domestica v196 Apple 265 209
No Yes Prunus persica v139 Peach 181 142
No Yes Linum usitatissimum v200 Flax 216 167
No Yes Manihot esculenta v147 Cassava 220 167
No Yes Populus trichocarpa v156 Black cottonwood 268 203
No Yes Vitis vinifera Wine grape 117 84
No Yes Mimulus guttatus v140 Spotted monkey flower 152 118
No Yes Solanum lycopersicum v.2.3 Tomato 169 135
No Yes Solanum tuberosum Potato 258 207
No Yes Actinidia chinensis Hongyang   228 194
No Yes Aquilegia coerulea v195   213 153
No Yes Triticum urartu 22   145 108
No Yes Triticum aestivum 22 Bread wheat 318 258
No Yes Aegilops tauschii 22   168 121
No Yes Brachypodium distachyon Stiff brome 175 139
No Yes Oryza barthii 22 African wild rice 194 138
No Yes Oryza meridionalis 22   191 145
No Yes Oryza glumaepatula 22   205 156
No Yes Oryza glaberrima African rice 155 124
No Yes Oryza punctata 22   202 148
No Yes Oryza nivara 22   231 165
No Yes Oryza brachyantha 22 Malo sina 150 116
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 322 273
No Yes Oryza sativa v193 Rice 319 270
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 186 131
No Yes Panicum virgatum v202 Switchgrass 411 311
No Yes Setaria italica v164 Foxtail millet 195 153
No Yes Zea mays subsp. mays Maize 293 223
No Yes Zea mays v181 Maize 311 239
No Yes Sorghum bicolor Sorghum 214 163
No Yes Musa balbisiana Balbis banana 261 223
No Yes Musa acuminata 22 Wild Malaysian banana 243 204
No Yes Amborella trichopoda 22   113 90
No Yes Physcomitrella patens   85 63
No Yes Coccomyxa subellipsoidea sp. C-169 v2   19 11
No Yes Asterochloris sp. Cgr/DA1pho v1.0   19 10
No Yes Chlorella variabilis sp. NC64A   14 9
No Yes Chlorella vulgaris   19 11
No Yes Volvox carteri f. nagariensis   13 11
No Yes Volvox carteri v199   13 11
No Yes Chlamydomonas reinhardtii 4.0   15 13
No Yes Ostreococcus sp. RCC809   14 10
No Yes Ostreococcus lucimarinus CCE9901   14 10
No Yes Ostreococcus tauri   10 8
No Yes Bathycoccus prasinos   151 58
No Yes Micromonas sp. RCC299   24 16
No Yes Micromonas pusilla CCMP1545 v3.0   22 13
No Yes Cyanidioschyzon merolae strain 10D 22   18 12
No Yes Cyanidioschyzon merolae   18 12
No Yes Porphyridium purpureum 02_2012   98 66
No Yes Thecamonas trahens ATCC 50062   21 14
No Yes Bigelowiella natans CCMP2755 22   192 112
No Yes Giardia lamblia 2.3   10 10
No Yes Cyanophora paradoxa   25 19
No Yes Leishmania mexicana 2.4   13 12
No Yes Leishmania major strain Friedlin   12 11
No Yes Leishmania infantum JPCM5 2.4   12 11
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   14 11
No Yes Trypanosoma vivax   49 41
No Yes Trypanosoma cruzi strain CL Brener   11 9
No Yes Trypanosoma congolense 2.4   55 47
No Yes Trypanosoma brucei gambiense v4.1   15 14
No Yes Trypanosoma brucei TREU927 v4.1   13 12
No Yes Ectocarpus siliculosus   24 18
No Yes Aureococcus anophagefferens   7 6
No Yes Albugo laibachii 22   41 33
No Yes Pythium iwayamai DAOM BR242034 22   63 42
No Yes Pythium arrhenomanes ATCC 12531 22   40 27
No Yes Pythium ultimum v1.7-2   82 49
No Yes Pythium aphanidermatum DAOM BR444 22   46 30
No Yes Pythium irregulare DAOM BR486 22   69 43
No Yes Pythium vexans DAOM BR484 22   55 36
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 70 44
No Yes Phytophthora sojae 1.1   66 41
No Yes Phytophthora infestans T30-4   78 49
No Yes Phytophthora capsici   70 42
No Yes Hyaloperonospora arabidopsidis 22   43 27
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 8
No Yes Fragilariopsis cylindrus   26 24
No Yes Thalassiosira pseudonana CCMP1335   14 13
No Yes Perkinsus marinus ATCC 50983   51 41
No Yes Paramecium tetraurelia   59 45
No Yes Tetrahymena thermophila SB210 1   36 23
No Yes Ichthyophthirius multifiliis strain G5   7 6
No Yes Cryptosporidium hominis   10 7
No Yes Cryptosporidium muris   14 11
No Yes Cryptosporidium parvum Iowa II   13 10
No Yes Neospora caninum   14 11
No Yes Toxoplasma gondii VEG   13 12
No Yes Toxoplasma gondii ME49   18 13
No Yes Toxoplasma gondii GT1   13 12
No Yes Babesia bovis T2Bo   22 18
No Yes Theileria parva   10 10
No Yes Theileria annulata   12 10
No Yes Plasmodium falciparum 3D7   10 8
No Yes Plasmodium vivax SaI-1 7.0   11 9
No Yes Plasmodium knowlesi strain H   10 9
No Yes Plasmodium yoelii ssp. yoelii 1   12 9
No Yes Plasmodium chabaudi   12 9
No Yes Plasmodium berghei ANKA   11 9
No Yes Symbiodinium minutum clade B1 v1.2   28 25
No Yes Naegleria gruberi   15 10
No Yes Trichomonas vaginalis   17 11
No Yes Guillardia theta CCMP2712 v1.0   28 22
No Yes Emiliania huxleyi CCMP1516   56 44
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes Babela massiliensis   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Pantoea sp. At-9b   6 2
No Yes Pseudomonas sp. UW4   4 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   3 3
No Yes Pyrolobus fumarii 1A   1 1
No Yes Ignisphaera aggregans DSM 17230   2 2
No Yes Acidianus hospitalis W1   2 2
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   2 2
No Yes Sulfolobus solfataricus P2   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   2 2
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3492 796
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1223 428
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 995 341
No Yes Ascaris suum Victoria/Ghent Pig roundworm 186 101
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 316 164
No Yes Cryptococcus neoformans var. grubii H99   37 26
No Yes Cryptococcus neoformans B-3501A   41 31
No Yes Cryptococcus neoformans JEC21   29 22
No Yes Paracoccidioides brasiliensis Pb01   51 41
No Yes Paracoccidioides brasiliensis Pb03   48 38
No Yes Coccidioides posadasii str. Silveira   61 46
No Yes Coccidioides immitis RMSCC 3703   53 42
No Yes Coccidioides immitis RMSCC 2394   60 46
No Yes Coccidioides immitis H538.4   46 35
No Yes Ajellomyces dermatitidis ER-3   60 49
No Yes Histoplasma capsulatum H143   53 40
No Yes Histoplasma capsulatum H88   62 47
No Yes Histoplasma capsulatum G186AR   57 42
No Yes Aspergillus fumigatus A1163   72 56
No Yes Candida albicans WO-1   48 37
No Yes Saccharomyces cerevisiae UC5   48 39
No Yes Saccharomyces cerevisiae PW5   44 36
No Yes Saccharomyces cerevisiae FL100   40 31
No Yes Saccharomyces cerevisiae CLIB382   3 3
No Yes Saccharomyces cerevisiae CLIB324   32 26
No Yes Saccharomyces cerevisiae CBS7960   39 30
No Yes Saccharomyces cerevisiae YJM269   41 35
No Yes Saccharomyces cerevisiae T7   56 44
No Yes Saccharomyces cerevisiae FostersB   42 34
No Yes Saccharomyces cerevisiae FostersO   38 31
No Yes Saccharomyces cerevisiae VL3   48 36
No Yes Saccharomyces cerevisiae Vin13   41 35
No Yes Saccharomyces cerevisiae LalvinQA23   36 32
No Yes Saccharomyces cerevisiae AWRI796   48 38
No Yes Saccharomyces cerevisiae Sigma1278b   56 44
No Yes Saccharomyces cerevisiae W303   54 43
No Yes Saccharomyces cerevisiae JAY291   54 43
No Yes Saccharomyces cerevisiae AWRI1631   40 32
No Yes Saccharomyces cerevisiae YPS163   24 19
No Yes Saccharomyces cerevisiae M22   23 19
No Yes Saccharomyces cerevisiae T73   29 25
No Yes Saccharomyces cerevisiae CLIB215   31 29
No Yes Saccharomyces cerevisiae Y10   12 12
No Yes Saccharomyces cerevisiae YJM789   56 44
No Yes Saccharomyces cerevisiae YJM789   52 43
No Yes Saccharomyces cerevisiae RM11-1a   55 43
No Yes Saccharomyces cerevisiae RM11-1a   55 43
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 55 44
No Yes Schizosaccharomyces pombe 972h-   33 26
No Yes Batrachochytrium dendrobatidis JEL423   73 49
No Yes Batrachochytrium dendrobatidis JAM81   69 47
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 161 132
No Yes Hordeum vulgare 22 Domesticated barley 316 206
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 236 190
No Yes Trypanosoma brucei Lister 427 v4.1   17 16
No Yes Neospora caninum Nc-Liverpool 6.2   14 11
No Yes Plasmodium falciparum HB3   10 8
No Yes Plasmodium falciparum Dd2   7 5
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   13 13
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   3 3
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   3 3
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   2 2
No Yes Sulfolobus islandicus M.16.4   2 2
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Natronococcus occultus SP4   2 2
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 11212 2302
No Yes Homo sapiens (NCBI version) Human 6518 1203
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3574 698
No Yes Heliconius numata (Incomplete)   146 95
No Yes Loa loa v3.3 (Request) Eye worm 468 274
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 193 115
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 435 175
No Yes Moniliophthora perniciosa FA553 (Genome survey)   19 18
No Yes Encephalitozoon intestinalis (endoparasite)   15 11
No Yes Encephalitozoon cuniculi (endoparasite)   14 11
No Yes Picea sitchensis (Incomplete) Sitka spruce 9 8
No Yes Lotus japonicus (Early assembly)   147 124
No Yes Malus x domestica (Duplicate) Apple 265 209
No Yes Ricinus communis (Early assembly) Castor bean 137 101
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   287 236
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 168 134
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 169 135
No Yes Phoenix dactylifera (Early draft) Date palm 52 41
No Yes Homo sapiens 69_37 Human 4393 801
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 3707 696
No Yes Gorilla gorilla 69_3.1 Western gorilla 3478 682
No Yes Pongo abelii 69_2 Sumatran orangutan 3417 673
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3499 657
No Yes Macaca mulatta 69_1 Rhesus monkey 3738 723
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3611 657
No Yes Otolemur garnettii 69_3 Small-eared galago 3496 629
No Yes Microcebus murinus 69_1 Gray mouse lemur 2020 471
No Yes Rattus norvegicus 69_3.4 Norway rat 2465 564
No Yes Mus musculus 69_38 House mouse 3610 702
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1407 356
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1708 423
No Yes Cavia porcellus 69_3 Domestic guinea pig 1359 367
No Yes Oryctolagus cuniculus 69_2 Rabbit 1442 368
No Yes Ochotona princeps 69 American pika 1450 368
No Yes Tupaia belangeri 69 Northern tree shrew 1530 376
No Yes Sus scrofa 69_10.2 Pig 2491 519
No Yes Bos taurus 69_3.1 Cattle 2866 565
No Yes Vicugna pacos 69_1 Alpaca 1376 329
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2468 537
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2538 536
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2090 480
No Yes Canis familiaris 69_3.1 Dog 2741 571
No Yes Felis catus 69 Domestic cat 1827 424
No Yes Equus caballus 69_2 Horse 3057 582
No Yes Myotis lucifugus 69_2.0 Little brown bat 1572 405
No Yes Pteropus vampyrus 69_1 Large flying fox 2121 484
No Yes Sorex araneus 69_1 European shrew 1119 297
No Yes Erinaceus europaeus 69 Western European hedgehog 1184 323
No Yes Procavia capensis 69_1 Cape rock hyrax 1897 452
No Yes Loxodonta africana 69_3 African savanna elephant 1436 383
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1956 469
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1797 449
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1666 390
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1221 322
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3317 572
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 5882 829
No Yes Ornithorhynchus anatinus 69_5 Platypus 1002 297
No Yes Petromyzon marinus 69_7.0 Sea lamprey 548 174
No Yes Meleagris gallopavo 69_2 Turkey 759 235
No Yes Gallus gallus 69_2 Chicken 991 261
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2414 590
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2371 483
No Yes Anolis carolinensis 69_2.0 Green anole 5846 744
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2325 443
No Yes Latimeria chalumnae 69_1 Coelacanth 1071 313
No Yes Gadus morhua 69_1 Atlantic cod 1011 334
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1165 366
No Yes Takifugu rubripes 69_4 Torafugu 1284 361
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1341 364
No Yes Oryzias latipes 69_1 Japanese medaka 1463 383
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1688 454
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2520 511
No Yes Danio rerio 69_9 Zebrafish 7070 1273
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 547 116
No Yes Ciona intestinalis 69 Vase tunicate 375 140
No Yes Drosophila melanogaster 69_5 Fruit fly 820 267
No Yes Caenorhabditis elegans 69_215 Roundworm 220 118
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 55 44
No Yes Arabidopsis thaliana 10 Thale cress 147 115
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Core Eukaryotic Genes 458 (CEGMA)   13 8
No Yes Crater Hills (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 3
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   5 4
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes NCBI 2017_08 genome   1502267 352898
No Yes Protozoadb 2010_08 (Protozoadb)   462 356
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   92266 23815
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   7 7
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   732602 249271
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   793 563
No Yes NCBI plasmid sequences (Plasmids)   11 9
No Yes NCBI viral sequences (Viral)   45 41
No Yes PDB chains (SCOP 1.75) (PDB)   212 173
No Yes Protein Data Bank (all PDB sequenc)   558 421
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1126 1112
No Yes TargetDB (Targets)   948 499
No Yes UniProt viral sequences (Viral)   30 25

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]