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  Home > Genomes > Homo sapiens 76_38 > SOCS box-like domains


SOCS box-like superfamily domain assignments
in
Homo sapiens 76_38

Assignment details

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Homo sapiens 76_38 has 79 significant domains in 79 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000218249   0.000000000314   189-227   SOCS box-like  
ENSP00000248139   0.0000000000785   189-228   SOCS box-like  
ENSP00000262394   0.0000000000916   375-419   SOCS box-like  
ENSP00000263634   0.00000000667   452-502   SOCS box-like  
ENSP00000264607   0.00000144   288-333   SOCS box-like  
ENSP00000269347   0.000000000144   10-48   SOCS box-like  
ENSP00000275699   0.00000000131   524-579   SOCS box-like  
ENSP00000275838   0.0000000327   378-422   SOCS box-like  
ENSP00000277458   0.00000000811   365-413   SOCS box-like  
ENSP00000284142   0.0000144   250-292   SOCS box-like  
ENSP00000293414   0.000000523   404-446   SOCS box-like  
ENSP00000294173   0.00000000000157   210-257   SOCS box-like  
ENSP00000296525   0.000000157   287-328   SOCS box-like  
ENSP00000305133   0.0000000000000981   482-523   SOCS box-like  
ENSP00000305648   0.0000000000968   189-227   SOCS box-like  
ENSP00000311609   0.00000366   235-272   SOCS box-like  
ENSP00000313756   0.00000000746   490-540   SOCS box-like  
ENSP00000319474   0.0000000103   357-403   SOCS box-like  
ENSP00000320675   0.0000000523   537-585   SOCS box-like  
ENSP00000320893   0.0000196   243-286   SOCS box-like  
ENSP00000321388   0.00000235   374-421   SOCS box-like  
ENSP00000327055   0.0000000000484   229-273   SOCS box-like  
ENSP00000328327   0.0000000471   269-313   SOCS box-like  
ENSP00000329418   0.000000196   165-210   SOCS box-like  
ENSP00000330341   0.000000000536   176-223   SOCS box-like  
ENSP00000339428   0.00000000000000379   150-197   SOCS box-like  
ENSP00000341327   0.0000000000000327   387-427   SOCS box-like  
ENSP00000343408   0.00000144   259-301   SOCS box-like  
ENSP00000350331   0.0000102   235-277   SOCS box-like  
ENSP00000361596   0.000000109   243-284   SOCS box-like  
ENSP00000361716   0.0000000000968   189-227   SOCS box-like  
ENSP00000367098   0.0000000301   401-445   SOCS box-like  
ENSP00000369837   0.00000157   263-305   SOCS box-like  
ENSP00000369855   0.00000127   252-292   SOCS box-like  
ENSP00000374252   0.000000000706   525-576   SOCS box-like  
ENSP00000378206   0.00000000536   379-429   SOCS box-like  
ENSP00000378330   0.0000000000000981   482-523   SOCS box-like  
ENSP00000378855   0.0000000000000327   387-427   SOCS box-like  
ENSP00000381034   0.00000000000109   497-535   SOCS box-like  
ENSP00000384728   0.00000000536   379-429   SOCS box-like  
ENSP00000385085   0.00000000732   487-537   SOCS box-like  
ENSP00000386532   0.0000000144   419-461   SOCS box-like  
ENSP00000387025   0.000000785   187-232   SOCS box-like  
ENSP00000390963   0.00000000131   524-579   SOCS box-like  
ENSP00000391137   0.0000000314   416-460   SOCS box-like  
ENSP00000397655   0.00000000131   524-579   SOCS box-like  
ENSP00000409131   0.000000011   374-420   SOCS box-like  
ENSP00000409346   0.0000000000017   227-274   SOCS box-like  
ENSP00000416172   0.00000000732   336-384   SOCS box-like  
ENSP00000416433   0.00000000131   524-579   SOCS box-like  
ENSP00000417914   0.0000017   280-322   SOCS box-like  
ENSP00000419199   0.000000000706   525-576   SOCS box-like  
ENSP00000422877   0.000000115   234-275   SOCS box-like  
ENSP00000428338   0.00000101   221-262   SOCS box-like  
ENSP00000430872   0.00000101   221-262   SOCS box-like  
ENSP00000438382   0.0000000000785   189-228   SOCS box-like  
ENSP00000438492   0.0000000000785   189-228   SOCS box-like  
ENSP00000439450   0.0000000105   359-405   SOCS box-like  
ENSP00000442898   0.00000000000000379   150-197   SOCS box-like  
ENSP00000444431   0.00000000314   147-193   SOCS box-like  
ENSP00000445050   0.0000000000785   189-228   SOCS box-like  
ENSP00000445622   0.0000196   243-286   SOCS box-like  
ENSP00000447161   0.00000000000000379   150-197   SOCS box-like  
ENSP00000448815   0.00000000000000379   150-197   SOCS box-like  
ENSP00000449227   0.00000000000000379   150-197   SOCS box-like  
ENSP00000451575   0.0000000589   585-633   SOCS box-like  
ENSP00000452522   0.0000000000000327   387-427   SOCS box-like  
ENSP00000453626   0.0000000196   66-111   SOCS box-like  
ENSP00000455029   0.000051   189-213   SOCS box-like  
ENSP00000455225   0.0000000000602   157-196   SOCS box-like  
ENSP00000461785   0.00000000102   189-227   SOCS box-like  
ENSP00000463395   0.00000000000109   497-535   SOCS box-like  
ENSP00000474805   0.00000000000000124   23-70   SOCS box-like  
ENSP00000474888   0.0000000000000523   2-38   SOCS box-like  
ENSP00000480388   0.0000000589   585-633   SOCS box-like  
ENSP00000480736   0.0000000000103   515-554   SOCS box-like  
ENSP00000481249   0.00000000000000379   150-197   SOCS box-like  
ENSP00000482229   0.0000000000103   515-554   SOCS box-like  
ENSP00000484381   0.00000000000955   481-520   SOCS box-like  
 
Weak hits:
ENSP00000301717   0.00445   275-311   SOCS box-like  
ENSP00000307854   0.0876   341-359   SOCS box-like  
ENSP00000330221   0.000248   235-272   SOCS box-like  
ENSP00000350573   0.000248   235-272   SOCS box-like  
ENSP00000353739   0.0667   337-354   SOCS box-like  
ENSP00000355195   0.000693   269-315   SOCS box-like  
ENSP00000358773   0.0785   314-332   SOCS box-like  
ENSP00000366616   0.000248   235-272   SOCS box-like  
ENSP00000428099   0.0667   337-354   SOCS box-like  
ENSP00000444026   0.0432   261-278   SOCS box-like  
ENSP00000457206   0.00445   275-311   SOCS box-like  
ENSP00000476726   0.0837   79-98   SOCS box-like  
ENSP00000477398   0.0419   191-209   SOCS box-like  
  0.051   89-108   SOCS box-like  
ENSP00000478638   0.0575   242-260   SOCS box-like  
  0.0706   140-158   SOCS box-like  
ENSP00000482166   0.0876   341-359   SOCS box-like  

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View all assignments containing a SOCS box-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   29430 29430
No Yes Homo sapiens 76_38 Human 79 79
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 36 36
No Yes Gorilla gorilla 76_3.1 Western gorilla 39 39
No Yes Pongo abelii 76_2 Sumatran orangutan 29 29
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 37 37
No Yes Papio anubis 76 Olive baboon 33 33
No Yes Macaca mulatta 76_1 Rhesus monkey 40 40
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 65 65
No Yes Otolemur garnettii 76_3 Small-eared galago 32 32
No Yes Microcebus murinus 76_1 Gray mouse lemur 21 21
No Yes Rattus norvegicus 76_5.0 Norway rat 35 35
No Yes Mus musculus 76_38 House mouse 56 56
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 32 32
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 31 31
No Yes Cavia porcellus 76_3 Domestic guinea pig 30 30
No Yes Oryctolagus cuniculus 76_2 Rabbit 31 31
No Yes Ochotona princeps 76 American pika 23 23
No Yes Tupaia belangeri 76 Northern tree shrew 20 20
No Yes Sus scrofa 76_10.2 Pig 31 31
No Yes Bos taurus 76_3.1 Cattle 33 33
No Yes Ovis aries 76_3.1 Sheep 32 32
No Yes Vicugna pacos 76_1 Alpaca 20 20
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 30 30
No Yes Mustela putorius furo 76_1.0 Domestic ferret 30 30
No Yes Ailuropoda melanoleuca 76_1 Giant panda 32 32
No Yes Canis familiaris 76_3.1 Dog 32 32
No Yes Felis catus 76_6.2 Domestic cat 32 32
No Yes Equus caballus 76_2 Horse 30 30
No Yes Myotis lucifugus 76_2.0 Little brown bat 29 29
No Yes Pteropus vampyrus 76_1 Large flying fox 27 27
No Yes Sorex araneus 76_1 European shrew 11 11
No Yes Erinaceus europaeus 76 Western European hedgehog 13 13
No Yes Procavia capensis 76_1 Cape rock hyrax 23 23
No Yes Loxodonta africana 76_3 African savanna elephant 34 34
No Yes Echinops telfairi 76 Small Madagascar hedgehog 19 19
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 34 34
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 17
No Yes Macropus eugenii 76_1.0 Tammar wallaby 22 22
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 37 37
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 76_5 Platypus 16 16
No Yes Saccoglossus kowalevskii v3.0   45 45
No Yes Petromyzon marinus 76_7.0 Sea lamprey 15 15
No Yes Meleagris gallopavo 76_2 Turkey 29 29
No Yes Gallus gallus 76_4 Chicken 30 30
No Yes Anas platyrhynchos 76_1.0 Mallard 26 26
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 26 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 28 28
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 31 31
No Yes Anolis carolinensis 76_2.0 Green anole 28 28
No Yes Xenopus laevis African clawed frog 44 44
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 27 27
No Yes Latimeria chalumnae 76_1 Coelacanth 38 38
No Yes Lepisosteus oculatus 76 Spotted gar 37 37
No Yes Gadus morhua 76_1 Atlantic cod 33 33
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 38 38
No Yes Takifugu rubripes 76_4 Torafugu 59 59
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 38 38
No Yes Oryzias latipes 76_1 Japanese medaka 35 35
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 40 40
No Yes Poecilia formosa 76 Amazon molly 39 39
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 40 40
No Yes Astyanax mexicanus 76 Mexican tetra 38 38
No Yes Danio rerio 76_9 Zebrafish 63 63
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 9 9
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 15 15
No Yes Adineta vaga   11 11
No Yes Octopus bimaculoides 280   36 36
No Yes Crassostrea gigas 22 Pacific oyster 32 32
No Yes Lottia gigantea Owl limpet 21 21
No Yes Helobdella robusta   13 13
No Yes Capitella sp. I   33 33
No Yes Danaus plexippus OGS1.0 Monarch butterfly 8 8
No Yes Heliconius melpomene Postman butterfly 6 6
No Yes Bombyx mori Domestic silkworm 3 3
No Yes Nasonia vitripennis Jewel wasp 4 4
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 12 12
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 11 11
No Yes Linepithema humile v1.1 Argentine ant 7 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 8 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 8 8
No Yes Atta cephalotes v1.1   8 8
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 9
No Yes Lucilia cuprina Australian sheep blowfly 6 6
No Yes Drosophila grimshawi 1.3   8 8
No Yes Drosophila willistoni 1.3   8 8
No Yes Drosophila pseudoobscura 2.13   8 8
No Yes Drosophila persimilis 1.3   6 6
No Yes Drosophila suzukii   7 6
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   7 7
No Yes Drosophila sechellia 1.3   8 8
No Yes Drosophila melanogaster 76_5 Fruit fly 23 23
No Yes Drosophila erecta 1.3   7 7
No Yes Drosophila ananassae 1.3   8 8
No Yes Drosophila virilis 1.2   8 8
No Yes Drosophila mojavensis 1.3   9 9
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 13 13
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 5
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 8 8
No Yes Tribolium castaneum 3.0 Red flour beetle 10 10
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 5
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   9 9
No Yes Daphnia pulex Common water flea 9 9
No Yes Strigamia maritima 22   14 14
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 6 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 10 10
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   4 4
No Yes Echinococcus granulosus   4 4
No Yes Taenia solium Pork tapeworm 4 4
No Yes Schistosoma mansoni   5 5
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   16 16
No Yes Nematostella vectensis 1.0 Starlet sea anemone 12 12
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   6 6
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 51 51
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 14 14
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 10 10
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 86 86
No Yes Homo sapiens (NCBI version) Human 53 53
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 33 33
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Homo sapiens 69_37 Human 35 35
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 34 34
No Yes Gorilla gorilla 69_3.1 Western gorilla 34 34
No Yes Pongo abelii 69_2 Sumatran orangutan 28 28
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 33 33
No Yes Macaca mulatta 69_1 Rhesus monkey 31 31
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 34 34
No Yes Otolemur garnettii 69_3 Small-eared galago 32 32
No Yes Microcebus murinus 69_1 Gray mouse lemur 21 21
No Yes Rattus norvegicus 69_3.4 Norway rat 30 30
No Yes Mus musculus 69_38 House mouse 33 33
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 30 30
No Yes Cavia porcellus 69_3 Domestic guinea pig 30 30
No Yes Oryctolagus cuniculus 69_2 Rabbit 30 30
No Yes Ochotona princeps 69 American pika 23 23
No Yes Tupaia belangeri 69 Northern tree shrew 20 20
No Yes Sus scrofa 69_10.2 Pig 28 28
No Yes Bos taurus 69_3.1 Cattle 31 31
No Yes Vicugna pacos 69_1 Alpaca 20 20
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 30 30
No Yes Mustela putorius furo 69_1.0 Domestic ferret 30 30
No Yes Ailuropoda melanoleuca 69_1 Giant panda 30 30
No Yes Canis familiaris 69_3.1 Dog 29 29
No Yes Felis catus 69 Domestic cat 19 19
No Yes Equus caballus 69_2 Horse 29 29
No Yes Myotis lucifugus 69_2.0 Little brown bat 28 28
No Yes Pteropus vampyrus 69_1 Large flying fox 27 27
No Yes Sorex araneus 69_1 European shrew 11 11
No Yes Erinaceus europaeus 69 Western European hedgehog 13 13
No Yes Procavia capensis 69_1 Cape rock hyrax 23 23
No Yes Loxodonta africana 69_3 African savanna elephant 32 32
No Yes Echinops telfairi 69 Small Madagascar hedgehog 19 19
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 14 14
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 17
No Yes Macropus eugenii 69_1.0 Tammar wallaby 22 22
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 30 30
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 69_5 Platypus 16 16
No Yes Petromyzon marinus 69_7.0 Sea lamprey 14 14
No Yes Meleagris gallopavo 69_2 Turkey 28 28
No Yes Gallus gallus 69_2 Chicken 28 28
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 26 26
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 27 27
No Yes Anolis carolinensis 69_2.0 Green anole 28 28
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 26 26
No Yes Latimeria chalumnae 69_1 Coelacanth 32 32
No Yes Gadus morhua 69_1 Atlantic cod 26 26
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 36 36
No Yes Takifugu rubripes 69_4 Torafugu 30 30
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 32 32
No Yes Oryzias latipes 69_1 Japanese medaka 30 30
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 40 40
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 37 37
No Yes Danio rerio 69_9 Zebrafish 41 41
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 6
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 8 8
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes NCBI 2017_08 genome   14758 14754
No Yes STRING v9.0.5 (STRING)   901 901
No Yes Uniprot 2018_03 genome   7179 7177
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   16 16
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   23 23
No Yes TargetDB (Targets)   35 35
No Yes UniProt viral sequences (Viral)   2 2

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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