Select to display Genome Domains Proteins No ALL 31323 31323 No Amphimedon queenslandica 1 1 No Trichoplax adhaerens 1 1 No Proterospongia sp. ATCC 50818 5 5 No Monosiga brevicollis 3 2 No Acholeplasma laidlawii PG-8A 1 1 No Gloeobacter violaceus PCC 7421 6 6 No Nostoc sp. PCC 7524 1 1 No Anabaena sp. 90 1 1 No Eggerthella lenta DSM 2243 1 1 No Microbacterium testaceum StLB037 1 1 No Truepera radiovictrix DSM 17093 1 1 No Deinococcus gobiensis I-0 1 1 No Deinococcus deserti VCD115 1 1 No Deinococcus maricopensis DSM 21211 1 1 No Deinococcus geothermalis DSM 11300 1 1 No Deinococcus proteolyticus MRP 1 1 No Deinococcus radiodurans R1 1 1 No Erysipelothrix rhusiopathiae str. Fujisawa 1 1 No Clostridium clariflavum DSM 19732 81 79 No Clostridium cellulolyticum H10 62 62 No Clostridium thermocellum ATCC 27405 73 71 No Ruminococcus bromii 27 26 No Ruminococcus albus 7 60 60 No Desulfotomaculum acetoxidans DSM 771 10 10 No Acetobacterium woodii DSM 1030 1 1 No Eubacterium eligens ATCC 27750 1 1 No Eubacterium limosum KIST612 5 5 No Clostridium difficile 630 1 1 No Clostridium saccharolyticum WM1 1 1 No Clostridium lentocellum DSM 5427 1 1 No [Ruminococcus] obeum 1 1 No Eubacterium rectale M104/1 1 1 No Eubacterium rectale ATCC 33656 1 1 No Roseburia hominis A2-183 1 1 No Butyrivibrio fibrisolvens 1 1 No Candidatus Arthromitus sp. SFB-mouse-Japan 1 1 No Clostridium sp. BNL1100 72 72 No Clostridium perfringens ATCC 13124 4 4 No Clostridium cellulovorans 743B 45 44 No Clostridium acetobutylicum ATCC 824 10 10 No Lactobacillus casei ATCC 334 1 1 No Lactobacillus rhamnosus Lc 705 1 1 No Paenibacillus sp. JDR-2 8 8 No Paenibacillus mucilaginosus 3016 9 9 No Bacillus selenitireducens MLS10 1 1 No Oceanobacillus iheyensis HTE831 2 2 No Bacillus thuringiensis str. Al Hakam 2 2 No Bacillus cereus 03BB102 2 2 No Candidatus Cloacamonas acidaminovorans 1 1 No Melioribacter roseus P3M 1 1 No Ignavibacterium album JCM 16511 7 7 No Haliscomenobacter hydrossis DSM 1100 18 18 No Salinibacter ruber M8 1 1 No Parabacteroides distasonis ATCC 8503 1 1 No Prevotella melaninogenica ATCC 25845 1 1 No Bacteroides helcogenes P 36-108 1 1 No Bacteroides thetaiotaomicron VPI-5482 1 1 No Bacteroides fragilis YCH46 1 1 No Robiginitalea biformata HTCC2501 1 1 No Ornithobacterium rhinotracheale DSM 15997 1 1 No Capnocytophaga canimorsus Cc5 1 1 No Flavobacterium johnsoniae UW101 1 1 No Phycisphaera mikurensis NBRC 102666 1 1 No Isosphaera pallida ATCC 43644 7 7 No Rhodopirellula baltica SH 1 18 18 No Pirellula staleyi DSM 6068 1 1 No Opitutus terrae PB90-1 1 1 No Akkermansia muciniphila ATCC BAA-835 1 1 No Elusimicrobium minutum Pei191 1 1 No Caldisericum exile AZM16c01 2 2 No Granulicella mallensis MP5ACTX8 1 1 No Terriglobus saanensis SP1PR4 2 2 No Desulfobacca acetoxidans DSM 11109 1 1 No Syntrophobacter fumaroxidans MPOB 1 1 No Desulfatibacillum alkenivorans AK-01 18 18 No Desulfococcus oleovorans Hxd3 1 1 No Geobacter daltonii FRC-32 4 4 No Geobacter uraniireducens Rf4 7 7 No Geobacter sulfurreducens KN400 4 4 No Geobacter metallireducens GS-15 1 1 No Corallococcus coralloides DSM 2259 2 2 No Myxococcus fulvus HW-1 2 2 No Cellvibrio japonicus Ueda107 1 1 No Shewanella piezotolerans WP3 1 1 No Pseudoalteromonas atlantica T6c 3 3 No Glaciecola sp. 4H-3-7+YE-5 1 1 No Marinobacter hydrocarbonoclasticus ATCC 49840 1 1 No Marinobacter aquaeolei VT8 1 1 No Alteromonas sp. SN2 2 2 No Alteromonas macleodii str. 'Deep ecotype' 1 1 No Hahella chejuensis KCTC 2396 2 2 No Methylomicrobium alcaliphilum 1 1 No Methylomonas methanica MC09 2 2 No Methanocella conradii HZ254 1 1 No Methanosaeta harundinacea 6Ac 1 1 No Methanosaeta thermophila PT 3 3 No Methanosaeta concilii GP6 8 8 No Methanococcoides burtonii DSM 6242 1 1 No Methanosarcina acetivorans C2A 3 3 No Methanosarcina mazei Go1 1 1 No Methanosphaerula palustris E1-9c 36 36 No Methanospirillum hungatei JF-1 4 4 No Methanoplanus petrolearius DSM 11571 1 1 No Methanoculleus bourgensis MS2 8 8 No Methanoculleus marisnigri JR1 1 1 No Archaeoglobus fulgidus DSM 4304 1 1 No Pyrococcus abyssi GE5 1 1 No Pyrococcus furiosus COM1 1 1 No Thermoplasmatales archaeon BRNA1 2 2 No Halopiger xanaduensis SH-6 1 1 No Haloterrigena turkmenica DSM 5511 2 2 No Natrialba magadii ATCC 43099 2 2 No Halogeometricum borinquense DSM 11551 2 2 No Haloferax mediterranei ATCC 33500 2 2 No Halomicrobium mukohataei DSM 12286 1 1 No Halorhabdus utahensis DSM 12940 3 3 No Haloarcula hispanica ATCC 33960 2 2 No Haloarcula marismortui ATCC 43049 4 4 No Halobacterium salinarum R1 1 1 No Halobacterium sp. NRC-1 1 1 No Methanotorris igneus Kol 5 2 2 No methanocaldococcus infernus ME 3 3 No Methanothermococcus okinawensis IH1 4 4 No Methanococcus aeolicus Nankai-3 3 3 No Methanococcus voltae A3 2 2 No Methanococcus vannielii SB 1 1 No Dactylococcopsis salina PCC 8305 2 2 No Synechococcus sp. JA-2-3B'a(2-13) 1 1 No Synechococcus sp. JA-3-3Ab 1 1 No Cyanothece sp. PCC 7822 3 3 No Gloeobacter kilaueensis Gloeobacter sp. JS 7 7 No Stanieria cyanosphaera PCC 7437 1 1 No Anabaena cylindrica PCC 7122 1 1 No Deinococcus peraridilitoris DSM 19664 1 1 No Erysipelothrix rhusiopathiae SY1027 1 1 No Clostridium thermocellum DSM 1313 78 76 No [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 1 1 No Ruminococcus champanellensis 18P13 63 62 No Clostridium difficile BI1 1 1 No Clostridium difficile R20291 1 1 No Clostridium difficile CD196 1 1 No Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 1 1 No Candidatus Arthromitus sp. SFB-rat-Yit 1 1 No Candidatus Arthromitus sp. SFB-mouse-Yit 1 1 No Clostridium saccharoperbutylacetonicum N1-4(HMT) 8 8 No Clostridium perfringens str. 13 3 3 No Clostridium acetobutylicum DSM 1731 10 10 No Clostridium acetobutylicum EA 2018 10 10 No Thermoanaerobacterium saccharolyticum JW/SL-YS485 1 1 No Enterococcus faecalis OG1RF 1 1 No Enterococcus faecalis V583 1 1 No Lactobacillus rhamnosus LOCK908 1 1 No Lactobacillus rhamnosus LOCK900 1 1 No Lactobacillus rhamnosus ATCC 8530 1 1 No Lactobacillus rhamnosus GG 1 1 No Lactobacillus rhamnosus GG 1 1 No Thermobacillus composti KWC4 1 1 No Paenibacillus mucilaginosus KNP414 9 9 No Paenibacillus mucilaginosus K02 8 8 No Bacillus toyonensis BCT-7112 2 2 No Bacillus thuringiensis MC28 2 2 No Bacillus thuringiensis serovar chinensis CT-43 1 1 No Bacillus thuringiensis YBT-1518 1 1 No Bacillus thuringiensis Bt407 1 1 No Bacillus thuringiensis serovar kurstaki str. HD73 1 1 No Bacillus thuringiensis BMB171 1 1 No Bacillus thuringiensis serovar finitimus YBT-020 1 1 No Bacillus thuringiensis serovar thuringiensis str. IS5056 1 1 No Bacillus cereus FRI-35 2 2 No Bacillus cereus biovar anthracis str. CI 2 2 No Bacillus cereus AH187 1 1 No Bacillus cereus B4264 1 1 No Bacillus cereus Q1 1 1 No Bacillus cereus F837/76 2 2 No Bacillus cereus NC7401 1 1 No Bacillus cereus E33L 1 1 No Bacillus cereus ATCC 14579 1 1 No Bacillus cereus ATCC 10987 1 1 No Salinibacter ruber DSM 13855 1 1 No Rhodothermus marinus SG0.5JP17-172 2 2 No Bacteroides fragilis 638R 1 1 No Bacteroides fragilis NCTC 9343 1 1 No Singulisphaera acidiphila DSM 18658 3 3 No Desulfocapsa sulfexigens DSM 10523 1 1 No Geobacter sulfurreducens PCA 4 4 No Sorangium cellulosum So0157-2 1 1 No Myxococcus stipitatus DSM 14675 1 1 No Sulfuricella denitrificans skB26 1 1 No Alteromonas macleodii str. 'Ionian Sea UM4b' 1 1 No Alteromonas macleodii str. 'Ionian Sea UM7' 1 1 No Alteromonas macleodii str. 'Ionian Sea U8' 1 1 No Alteromonas macleodii str. 'Ionian Sea U7' 1 1 No Alteromonas macleodii str. 'Ionian Sea U4' 1 1 No Alteromonas macleodii str. 'Aegean Sea MED64' 1 1 No Alteromonas macleodii AltDE1 1 1 No Alteromonas macleodii str. 'English Channel 673' 1 1 No Alteromonas macleodii str. 'Balearic Sea AD45' 1 1 No Alteromonas macleodii str. 'Black Sea 11' 1 1 No Alteromonas macleodii ATCC 27126 1 1 No Methanolobus psychrophilus R15 1 1 No Methanosarcina mazei Tuc01 1 1 No Archaeoglobus sulfaticallidus PM70-1 4 4 No Thermococcus litoralis DSM 5473 1 1 No Pyrococcus sp. NA2 1 1 No Pyrococcus furiosus DSM 3638 1 1 No Candidatus Methanomethylophilus alvus Mx1201 3 3 No Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 9 9 No Natronobacterium gregoryi SP2 1 1 No Halorhabdus tiamatea SARL4B 7 7 No Haloarcula hispanica N601 2 2 No Methanococcus maripaludis X1 2 2 No Acholeplasma laidlawii PG-8A (duplicate) 1 1 No 1_050719N (meta-genome) 2 2 No 1_Upper_euphotic (meta-genome) 2 2 No 2_Base_of_chrolophyll_max (meta-genome) 2 2 No 3_050719R (meta-genome) 135 134 No 3_Below_base_of_euphotic (meta-genome) 2 2 No 4_050719Q (meta-genome) 97 97 No 4_Deep_abyss (meta-genome) 8 8 No 5_050719P (meta-genome) 142 142 No 5_Below_upper_mesopelagic (meta-genome) 3 3 No 6_Upper_euphotic (meta-genome) 3 3 No 7_Oxygen_minimum_layer (meta-genome) 12 12 No Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome) 3 3 No Bath Hot Springs, planktonic community (meta-genome) 1 1 No Combined (meta-genome) 1 1 No Cyphomyrmex longiscapus fungus garden (meta-genome) 3 3 No Dump bottom (Dump bottom) (meta-genome) 4 4 No Dump top (Dump top) (meta-genome) 6 6 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 2 2 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 15 15 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 2 2 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 8 8 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 3 3 No Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 5 5 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 6 6 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 7 7 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 11 11 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 15 15 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 8 8 No Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 7 7 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 11 11 No Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 58 58 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 33 33 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 9 9 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 12 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 12 12 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 20 20 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 13 13 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 1 1 No Human Gut Community Subject 7 (meta-genome) 13 13 No Human Gut Community Subject 8 (meta-genome) 18 18 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 55 55 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 2 2 No Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 7 7 No Marine anammox bioreactor enriched for Scalindua species (meta-genome) 3 3 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 75 75 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 29 29 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 16 16 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 25 25 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 6 6 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 8 8 No Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 10 10 No NCBI 2017_08 genome 11161 11071 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 29 29 No Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 1 1 No simHC - Simulated High Complexity Metagenome (meta-genome) 13 13 No simLC - Simulated Low Complexity Metagenome (meta-genome) 2 2 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 7 7 No Sludge/Australian, Phrap Assembly (meta-genome) 1 1 No Sludge/US, Jazz Assembly (meta-genome) 1 1 No Sludge/US, Phrap Assembly (meta-genome) 2 2 No Soil microbial communities from Minnesota Farm (meta-genome) 36 36 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 70 70 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 16 16 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 7 7 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 22 22 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 24 24 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 6 6 Yes STRING v9.0.5 (STRING) 349 346 No Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 2 2 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 30 30 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 5 5 No Uniprot 2018_03 genome 15933 15737 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 35 35 No Global Ocean Sampling Expedition (GOS) 766 765 No NCBI plasmid sequences (Plasmids) 22 22 No NCBI viral sequences (Viral) 1 1 No PDB chains (SCOP 1.75 ) (PDB) 5 5 No Protein Data Bank (all PDB sequenc) 47 47 No SCOP2 SCOPe CATH ECOD (all domain sequ) 69 69 No TargetDB 46 44
