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  Home > Genomes > Latimeria chalumnae 76_1 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Latimeria chalumnae 76_1

Assignment details

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Latimeria chalumnae 76_1 has 484 significant domains in 444 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSLACP00000000041   2.21e-22   60-127   RING finger domain, C3HC4  
ENSLACP00000000052   5.52e-17   7-90   RING finger domain, C3HC4  
ENSLACP00000000053   3.53e-19   10-80   RING finger domain, C3HC4  
ENSLACP00000000054   3.53e-19   4-74   RING finger domain, C3HC4  
ENSLACP00000000087   8.52e-18   12-86   RING finger domain, C3HC4  
ENSLACP00000000391   0.00000883   163-202   RING finger domain, C3HC4  
  0.00236   10-55   RING finger domain, C3HC4  
  0.00428   75-134   RING finger domain, C3HC4  
ENSLACP00000000453   0.0000000000518   8-59   RING finger domain, C3HC4  
ENSLACP00000000454   0.0000000000518   8-59   RING finger domain, C3HC4  
ENSLACP00000000455   0.0000000000196   8-59   RING finger domain, C3HC4  
ENSLACP00000000474   2.16e-22   4-76   RING finger domain, C3HC4  
ENSLACP00000000475   1.79e-17   528-592   RING finger domain, C3HC4  
ENSLACP00000000545   0.00000833   234-275   RING finger domain, C3HC4  
ENSLACP00000000570   6.36e-21   219-297   ZZ domain  
ENSLACP00000000627   1.02e-16   10-79   RING finger domain, C3HC4  
ENSLACP00000000671   9.98e-20   13-83   RING finger domain, C3HC4  
ENSLACP00000000672   5.96e-20   4-73   RING finger domain, C3HC4  
ENSLACP00000000790   1.35e-20   3-72   RING finger domain, C3HC4  
ENSLACP00000000855   0.0000000167   352-421   RING finger domain, C3HC4  
ENSLACP00000000856   0.0000000151   246-315   RING finger domain, C3HC4  
ENSLACP00000000872   0.0000000000000331   5-51   RING finger domain, C3HC4  
ENSLACP00000000880   2.7e-24   3-76   RING finger domain, C3HC4  
ENSLACP00000000925   9.28e-20   19-91   RING finger domain, C3HC4  
ENSLACP00000000955   0.0000000102   10-75   RING finger domain, C3HC4  
ENSLACP00000001012   9.28e-21   3-72   RING finger domain, C3HC4  
ENSLACP00000001013   7.51e-21   4-74   RING finger domain, C3HC4  
ENSLACP00000001025   1.08e-20   24-97   RING finger domain, C3HC4  
ENSLACP00000001051   0.00000000128   1434-1486   RING finger domain, C3HC4  
ENSLACP00000001054   1.43e-22   6-79   RING finger domain, C3HC4  
ENSLACP00000001061   4e-19   203-281   ZZ domain  
ENSLACP00000001063   0.000000000000125   2-69   RING finger domain, C3HC4  
ENSLACP00000001172   2.21e-22   5-78   RING finger domain, C3HC4  
ENSLACP00000001315   8.94e-24   7-79   RING finger domain, C3HC4  
ENSLACP00000001324   0.0000618   2-36   RING finger domain, C3HC4  
ENSLACP00000001339   4.18e-20   94-198   RING finger domain, C3HC4  
ENSLACP00000001354   1.48e-22   6-84   RING finger domain, C3HC4  
ENSLACP00000001469   0.000000000000994   41-94   RING finger domain, C3HC4  
ENSLACP00000001470   0.0000000000641   41-92   RING finger domain, C3HC4  
ENSLACP00000001658   1.34e-21   6-78   RING finger domain, C3HC4  
ENSLACP00000001666   0.00000000000000636   797-865   IBR domain  
  0.0000000053   714-777   RING finger domain, C3HC4  
  0.00000836   878-948   RING finger domain, C3HC4  
ENSLACP00000001680   1.15e-19   4-79   RING finger domain, C3HC4  
ENSLACP00000001755   0.00000000000162   18-111   RING finger domain, C3HC4  
ENSLACP00000001841   0.0000494   151-193   RING finger domain, C3HC4  
  0.0212   66-122   RING finger domain, C3HC4  
  0.0847   3-46   RING finger domain, C3HC4  
ENSLACP00000001870   0.000000000149   594-658   RING finger domain, C3HC4  
ENSLACP00000001923   5.74e-20   7-77   RING finger domain, C3HC4  
ENSLACP00000002005   0.000000000000683   6-71   RING finger domain, C3HC4  
ENSLACP00000002157   5.98e-19   220-284   RING finger domain, C3HC4  
ENSLACP00000002179   5.96e-22   16-89   RING finger domain, C3HC4  
ENSLACP00000002218   6.59e-27   3-97   Zf-UBP  
ENSLACP00000002314   1.35e-21   4-75   RING finger domain, C3HC4  
ENSLACP00000002368   8.84e-22   15-88   RING finger domain, C3HC4  
ENSLACP00000002438   9.28e-22   7-79   RING finger domain, C3HC4  
ENSLACP00000002450   4.16e-20   11-84   RING finger domain, C3HC4  
ENSLACP00000002454   0.000000000000163   16-75   RING finger domain, C3HC4  
ENSLACP00000002494   0.00000000000000424   8-68   RING finger domain, C3HC4  
ENSLACP00000002496   0.0000188   146-224   RING finger domain, C3HC4  
ENSLACP00000002497   0.0000188   146-224   RING finger domain, C3HC4  
ENSLACP00000002644   1.2e-22   11-84   RING finger domain, C3HC4  
ENSLACP00000002659   2.87e-18   1-68   RING finger domain, C3HC4  
ENSLACP00000002680   0.000000000177   131-183   RING finger domain, C3HC4  
ENSLACP00000002682   6.87e-21   20-93   RING finger domain, C3HC4  
ENSLACP00000002689   3.18e-24   1254-1332   U-box  
ENSLACP00000002690   3.18e-24   1267-1345   U-box  
ENSLACP00000002748   1.46e-20   11-81   RING finger domain, C3HC4  
ENSLACP00000002802   4.16e-20   14-86   RING finger domain, C3HC4  
ENSLACP00000002876   0.00000000000000117   63-129   RING finger domain, C3HC4  
ENSLACP00000002918   3.53e-22   6-77   RING finger domain, C3HC4  
ENSLACP00000002960   2.3e-18   5-76   RING finger domain, C3HC4  
ENSLACP00000002961   2.01e-18   5-76   RING finger domain, C3HC4  
ENSLACP00000002970   0.0000000000000175   51-100   RING finger domain, C3HC4  
ENSLACP00000002996   2.87e-23   10-82   RING finger domain, C3HC4  
ENSLACP00000002997   2.87e-23   8-80   RING finger domain, C3HC4  
ENSLACP00000002998   0.000000000000454   24-118   RING finger domain, C3HC4  
ENSLACP00000002999   0.00000000000113   17-113   RING finger domain, C3HC4  
ENSLACP00000003101   6.83e-28   2-96   Zf-UBP  
ENSLACP00000003205   4.48e-19   2-68   RING finger domain, C3HC4  
ENSLACP00000003285   1.98e-23   4-77   RING finger domain, C3HC4  
ENSLACP00000003331   4.86e-16   5-69   RING finger domain, C3HC4  
ENSLACP00000003343   0.0000000000000291   229-283   RING finger domain, C3HC4  
ENSLACP00000003401   2.59e-17   177-240   RING finger domain, C3HC4  
ENSLACP00000003455   5.3e-16   37-102   RING finger domain, C3HC4  
ENSLACP00000003479   7.95e-18   3-75   RING finger domain, C3HC4  
ENSLACP00000003485   2.43e-19   908-961   RING finger domain, C3HC4  
ENSLACP00000003510   8.62e-20   6-77   RING finger domain, C3HC4  
ENSLACP00000003537   2e-22   61-154   Zf-UBP  
ENSLACP00000003538   1.88e-22   40-133   Zf-UBP  
ENSLACP00000003554   0.000000055   4808-4881   RING finger domain, C3HC4  
ENSLACP00000003556   9.98e-19   69-140   RING finger domain, C3HC4  
ENSLACP00000003651   0.00000000000000139   3-90   RING finger domain, C3HC4  
  0.00233   110-165   RING finger domain, C3HC4  
ENSLACP00000003706   6.41e-23   3-76   RING finger domain, C3HC4  
ENSLACP00000003759   8.32e-23   9-81   RING finger domain, C3HC4  
ENSLACP00000003852   2.43e-20   10-79   RING finger domain, C3HC4  
ENSLACP00000003857   0.0000000000000486   3-55   U-box  
ENSLACP00000003873   9.06e-23   8-79   RING finger domain, C3HC4  
ENSLACP00000003907   3.53e-22   21-94   RING finger domain, C3HC4  
ENSLACP00000003937   0.0000000000000589   5-76   RING finger domain, C3HC4  
ENSLACP00000003952   0.0000000000000203   1-50   RING finger domain, C3HC4  
ENSLACP00000004020   7.28e-17   473-535   RING finger domain, C3HC4  
  0.000000000152   141-213   RING finger domain, C3HC4  
ENSLACP00000004056   0.00000000000000208   39-91   RING finger domain, C3HC4  
ENSLACP00000004099   0.00000000000000729   17-91   RING finger domain, C3HC4  
ENSLACP00000004211   0.00000000000601   13-73   RING finger domain, C3HC4  
ENSLACP00000004320   1.62e-24   6-79   RING finger domain, C3HC4  
ENSLACP00000004395   7.3e-17   27-87   RING finger domain, C3HC4  
ENSLACP00000004496   0.0000000000000353   459-530   RING finger domain, C3HC4  
ENSLACP00000004568   4.62e-34   28-110   RING finger domain, C3HC4  
ENSLACP00000004629   7.51e-24   15-88   RING finger domain, C3HC4  
ENSLACP00000004940   6.41e-23   21-93   RING finger domain, C3HC4  
ENSLACP00000004955   3.53e-25   267-351   RING finger domain, C3HC4  
ENSLACP00000004975   9.06e-23   7-79   RING finger domain, C3HC4  
ENSLACP00000005034   0.000000000141   937-994   RING finger domain, C3HC4  
ENSLACP00000005116   0.00000000252   2-30   RING finger domain, C3HC4  
ENSLACP00000005256   1.21e-22   9-80   RING finger domain, C3HC4  
ENSLACP00000005350   0.00000000000000589   72-128   Variant RING domain  
ENSLACP00000005351   0.0000000000000659   261-316   Variant RING domain  
ENSLACP00000005384   0.000000000000328   7-75   RING finger domain, C3HC4  
ENSLACP00000005392   6.47e-18   211-285   ZZ domain  
  0.0000000000000231   336-393   RING finger domain, C3HC4  
  0.0000000124   136-202   RING finger domain, C3HC4  
ENSLACP00000005408   9.24e-32   1-83   RING finger domain, C3HC4  
ENSLACP00000005530   0.0000000000565   21-87   IBR domain  
  0.0000000006   102-152   RING finger domain, C3HC4  
ENSLACP00000005552   1.09e-19   222-286   RING finger domain, C3HC4  
ENSLACP00000005659   6.85e-20   8-82   RING finger domain, C3HC4  
ENSLACP00000005705   5.3e-40   20-105   RING finger domain, C3HC4  
ENSLACP00000005724   0.0000000000000353   3-79   RING finger domain, C3HC4  
ENSLACP00000005740   0.0000000000365   222-274   ZZ domain  
ENSLACP00000005741   0.0000000000365   221-273   ZZ domain  
ENSLACP00000005754   7.77e-18   3-63   ZZ domain  
ENSLACP00000005782   1.17e-22   6-78   RING finger domain, C3HC4  
ENSLACP00000005860   0.0000000104   21-77   RING finger domain, C3HC4  
ENSLACP00000005878   2.21e-16   3-76   RING finger domain, C3HC4  
ENSLACP00000005892   1.61e-22   8-81   RING finger domain, C3HC4  
ENSLACP00000005967   0.00000000000000141   4-109   Zf-UBP  
ENSLACP00000005968   0.00000000000000141   4-109   Zf-UBP  
ENSLACP00000006041   4.36e-23   9-92   Zf-UBP  
ENSLACP00000006207   1.84e-18   272-336   RING finger domain, C3HC4  
ENSLACP00000006335   0.000000169   357-409   RING finger domain, C3HC4  
ENSLACP00000006405   1.21e-18   9-84   RING finger domain, C3HC4  
ENSLACP00000006406   1.26e-18   9-84   RING finger domain, C3HC4  
ENSLACP00000006461   0.0000000000000326   5-75   RING finger domain, C3HC4  
ENSLACP00000006535   0.00000000000000895   67-120   Variant RING domain  
ENSLACP00000006740   3.74e-32   3-103   RING finger domain, C3HC4  
ENSLACP00000006754   1.13e-21   551-639   ZZ domain  
ENSLACP00000006765   0.00000000157   41-84   RING finger domain, C3HC4  
ENSLACP00000006820   0.00000000000027   14-68   RING finger domain, C3HC4  
ENSLACP00000006845   1.06e-20   16-92   RING finger domain, C3HC4  
ENSLACP00000006922   3.53e-17   448-510   RING finger domain, C3HC4  
  0.0000000000404   114-181   RING finger domain, C3HC4  
ENSLACP00000006923   3.33e-17   414-476   RING finger domain, C3HC4  
  0.0000000000379   78-145   RING finger domain, C3HC4  
ENSLACP00000006946   4.42e-18   18-86   RING finger domain, C3HC4  
ENSLACP00000006964   0.0000000000111   3-57   RING finger domain, C3HC4  
ENSLACP00000006977   1.03e-20   116-170   RING finger domain, C3HC4  
ENSLACP00000006978   9.24e-21   135-189   RING finger domain, C3HC4  
ENSLACP00000006983   0.00000000203   131-204   RING finger domain, C3HC4  
ENSLACP00000007009   1.19e-16   394-453   RING finger domain, C3HC4  
ENSLACP00000007218   0.000000166   18-100   RING finger domain, C3HC4  
ENSLACP00000007259   8.48e-17   26-110   RING finger domain, C3HC4  
  0.0000000000000918   187-231   RING finger domain, C3HC4  
  0.00000000383   102-168   IBR domain  
ENSLACP00000007266   1.58e-18   8-85   RING finger domain, C3HC4  
ENSLACP00000007334   2.24e-36   175-284   Zf-UBP  
ENSLACP00000007370   1.59e-19   518-580   RING finger domain, C3HC4  
ENSLACP00000007426   0.00000000129   186-235   RING finger domain, C3HC4  
  0.000212   105-154   RING finger domain, C3HC4  
  0.00113   33-93   RING finger domain, C3HC4  
ENSLACP00000007593   0.0000000000000115   283-336   Variant RING domain  
ENSLACP00000007599   0.00000000000000236   2-55   RING finger domain, C3HC4  
ENSLACP00000007626   0.0000000000000225   422-475   RING finger domain, C3HC4  
ENSLACP00000007632   0.00000209   65-127   RING finger domain, C3HC4  
ENSLACP00000007650   2.36e-20   548-596   RING finger domain, C3HC4  
ENSLACP00000007850   2.08e-22   15-86   RING finger domain, C3HC4  
ENSLACP00000007918   1.77e-23   1008-1102   Zf-UBP  
ENSLACP00000007942   2.91e-22   5-83   RING finger domain, C3HC4  
ENSLACP00000008027   0.00000000000000753   574-638   Variant RING domain  
ENSLACP00000008028   0.00000000000000683   525-589   Variant RING domain  
ENSLACP00000008089   2.87e-20   9-81   RING finger domain, C3HC4  
ENSLACP00000008208   0.0000503   151-187   RING finger domain, C3HC4  
  0.0336   66-122   RING finger domain, C3HC4  
  0.0706   3-46   RING finger domain, C3HC4  
ENSLACP00000008248   1.08e-23   9-81   RING finger domain, C3HC4  
ENSLACP00000008283   0.00000000959   355-407   RING finger domain, C3HC4  
ENSLACP00000008290   0.0000000148   465-528   RING finger domain, C3HC4  
ENSLACP00000008306   0.00000000000203   36-81   RING finger domain, C3HC4  
ENSLACP00000008341   2.19e-18   3-72   RING finger domain, C3HC4  
ENSLACP00000008377   4.71e-21   53-127   ZZ domain  
  0.0000000442   927-987   RING finger domain, C3HC4  
  0.00389   798-841   RING finger domain, C3HC4  
  0.0169   845-890   RING finger domain, C3HC4  
ENSLACP00000008428   5.96e-21   298-346   RING finger domain, C3HC4  
ENSLACP00000008430   0.000000000000457   10-62   RING finger domain, C3HC4  
ENSLACP00000008431   0.0000000000000998   16-68   RING finger domain, C3HC4  
ENSLACP00000008445   4.71e-18   7-78   RING finger domain, C3HC4  
ENSLACP00000008481   1.92e-21   15-86   RING finger domain, C3HC4  
ENSLACP00000008611   0.0000000000000118   26-86   RING finger domain, C3HC4  
  0.000000000000565   204-271   RING finger domain, C3HC4  
ENSLACP00000008765   0.00000000000000335   26-110   RING finger domain, C3HC4  
  0.00000000000335   191-230   RING finger domain, C3HC4  
  0.000000113   103-168   IBR domain  
ENSLACP00000008766   0.00000000000000371   26-110   RING finger domain, C3HC4  
  0.00000000000168   189-228   RING finger domain, C3HC4  
  0.000000111   103-168   IBR domain  
ENSLACP00000008870   0.00000000000872   231-299   RING finger domain, C3HC4  
ENSLACP00000008874   2.83e-16   3-75   RING finger domain, C3HC4  
ENSLACP00000008914   0.0000000000000265   753-804   RING finger domain, C3HC4  
ENSLACP00000009036   7.07e-18   35-108   RING finger domain, C3HC4  
ENSLACP00000009144   0.00000000033   25-68   RING finger domain, C3HC4  
ENSLACP00000009152   0.0000000000106   606-664   RING finger domain, C3HC4  
ENSLACP00000009188   1.29e-17   23-131   Zf-UBP  
ENSLACP00000009233   0.00000000000129   344-390   ZZ domain  
ENSLACP00000009234   0.000000000000624   353-399   ZZ domain  
ENSLACP00000009404   0.0000000000000186   25-99   RING finger domain, C3HC4  
ENSLACP00000009547   4.83e-20   220-301   ZZ domain  
ENSLACP00000009551   0.00000000000188   1827-1888   ZZ domain  
  0.00000008   1785-1835   ZZ domain  
ENSLACP00000009552   5.14e-19   70-136   RING finger domain, C3HC4  
ENSLACP00000009576   0.00000000000388   30-70   Variant RING domain  
ENSLACP00000009585   0.0000000000126   129-190   RING finger domain, C3HC4  
ENSLACP00000009586   0.0000000000126   129-190   RING finger domain, C3HC4  
ENSLACP00000009588   7.07e-20   413-479   RING finger domain, C3HC4  
ENSLACP00000009619   3.74e-16   3-84   RING finger domain, C3HC4  
ENSLACP00000009650   0.0000000158   331-386   RING finger domain, C3HC4  
ENSLACP00000010141   0.000000000544   14-59   RING finger domain, C3HC4  
  0.06   140-190   ZZ domain  
ENSLACP00000010314   0.000000000383   42-97   RING finger domain, C3HC4  
ENSLACP00000010350   0.00000000495   1641-1692   RING finger domain, C3HC4  
ENSLACP00000010658   0.0000000139   9-59   RING finger domain, C3HC4  
ENSLACP00000010676   0.0000201   57-105   RING finger domain, C3HC4  
ENSLACP00000010703   0.0000148   1135-1194   RING finger domain, C3HC4  
ENSLACP00000010733   0.0000000864   298-362   RING finger domain, C3HC4  
ENSLACP00000010758   0.0000000000000116   10-71   RING finger domain, C3HC4  
ENSLACP00000011052   5.42e-34   218-293   RING finger domain, C3HC4  
ENSLACP00000011130   7.51e-24   211-277   RING finger domain, C3HC4  
ENSLACP00000011225   0.00000000000000104   814-877   ZZ domain  
ENSLACP00000011262   0.00000000618   212-273   RING finger domain, C3HC4  
ENSLACP00000011320   0.00000000000000122   2-88   RING finger domain, C3HC4  
  0.000918   112-161   ZZ domain  
ENSLACP00000011356   0.000000022   27-75   RING finger domain, C3HC4  
ENSLACP00000011480   0.000000000000377   17-111   RING finger domain, C3HC4  
ENSLACP00000011488   0.0000000346   185-237   RING finger domain, C3HC4  
ENSLACP00000011575   0.000000739   48-95   RING finger domain, C3HC4  
ENSLACP00000011584   0.0000000353   17-67   RING finger domain, C3HC4  
ENSLACP00000011599   0.00000159   431-479   RING finger domain, C3HC4  
ENSLACP00000011606   0.00000000000121   14-67   RING finger domain, C3HC4  
ENSLACP00000011646   2.35e-19   1-117   Zf-UBP  
ENSLACP00000011664   0.000000000000229   8-69   RING finger domain, C3HC4  
ENSLACP00000011709   0.0000000659   8-53   ZZ domain  
ENSLACP00000011805   0.00000000000906   763-828   RING finger domain, C3HC4  
ENSLACP00000011847   1.15e-24   206-285   U-box  
ENSLACP00000011904   0.000000000000226   2-42   Variant RING domain  
ENSLACP00000011949   1.06e-16   10-81   RING finger domain, C3HC4  
ENSLACP00000011995   0.000000942   55-121   RING finger domain, C3HC4  
ENSLACP00000011999   0.00000000000025   9-79   RING finger domain, C3HC4  
ENSLACP00000012000   0.000000000000291   9-79   RING finger domain, C3HC4  
ENSLACP00000012140   0.00000000000848   12-65   RING finger domain, C3HC4  
ENSLACP00000012141   0.0000000000113   8-60   RING finger domain, C3HC4  
ENSLACP00000012167   9.64e-22   204-290   RING finger domain, C3HC4  
  3.18e-16   379-436   RING finger domain, C3HC4  
  0.000000000000653   279-342   IBR domain  
ENSLACP00000012196   4.12e-19   37-146   Zf-UBP  
ENSLACP00000012279   5.11e-22   23-95   RING finger domain, C3HC4  
ENSLACP00000012336   6.71e-24   9-94   Zf-UBP  
ENSLACP00000012402   0.000000000000024   246-329   U-box  
  0.00000234   471-520   RING finger domain, C3HC4  
ENSLACP00000012428   0.00000000141   542-608   IBR domain  
  0.00000000159   466-515   RING finger domain, C3HC4  
ENSLACP00000012517   2.64e-19   9-88   RING finger domain, C3HC4  
ENSLACP00000012645   6.68e-18   97-167   RING finger domain, C3HC4  
ENSLACP00000012646   5.95e-18   87-157   RING finger domain, C3HC4  
ENSLACP00000012754   0.00000111   16-64   ZZ domain  
ENSLACP00000012876   1.37e-18   9-83   RING finger domain, C3HC4  
ENSLACP00000012920   0.00000000000177   1688-1735   ZZ domain  
ENSLACP00000013081   0.0000000000000376   375-439   RING finger domain, C3HC4  
ENSLACP00000013091   2.33e-18   3-75   RING finger domain, C3HC4  
ENSLACP00000013147   0.00000000000000154   36-108   RING finger domain, C3HC4  
ENSLACP00000013148   0.00000000000000152   41-113   RING finger domain, C3HC4  
ENSLACP00000013300   1.92e-20   5-80   RING finger domain, C3HC4  
ENSLACP00000013470   1.11e-21   289-346   RING finger domain, C3HC4  
ENSLACP00000013482   0.00000000000000287   246-305   RING finger domain, C3HC4  
ENSLACP00000013564   0.000000000942   377-430   RING finger domain, C3HC4  
ENSLACP00000013567   0.000053   60-113   RING finger domain, C3HC4  
ENSLACP00000013572   3.53e-19   4-78   RING finger domain, C3HC4  
ENSLACP00000013599   1.36e-19   261-317   RING finger domain, C3HC4  
ENSLACP00000013600   1.34e-19   261-317   RING finger domain, C3HC4  
ENSLACP00000013706   0.00000000000000183   120-170   RING finger domain, C3HC4  
ENSLACP00000013719   3.09e-18   9-82   RING finger domain, C3HC4  
  0.0942   56-138   Zf-UBP  
ENSLACP00000013753   0.000000000000137   78-124   RING finger domain, C3HC4  
ENSLACP00000013819   5.41e-18   347-405   RING finger domain, C3HC4  
ENSLACP00000013831   6e-17   108-163   ZZ domain  
ENSLACP00000013833   6.48e-16   450-499   RING finger domain, C3HC4  
  0.0000000000000942   266-350   RING finger domain, C3HC4  
  0.000123   343-424   RING finger domain, C3HC4  
ENSLACP00000013834   0.0000000000000012   105-154   RING finger domain, C3HC4  
  0.000707   6-79   RING finger domain, C3HC4  
ENSLACP00000013845   0.0000000103   475-528   RING finger domain, C3HC4  
ENSLACP00000013881   6.85e-24   5-80   RING finger domain, C3HC4  
ENSLACP00000014006   2.7e-27   289-390   Zf-UBP  
ENSLACP00000014007   2.5e-27   279-380   Zf-UBP  
ENSLACP00000014008   0.0000000000000459   12-76   Variant RING domain  
ENSLACP00000014010   1.04e-20   240-327   RING finger domain, C3HC4  
ENSLACP00000014011   1.06e-20   242-329   RING finger domain, C3HC4  
ENSLACP00000014022   1.06e-17   33-105   RING finger domain, C3HC4  
ENSLACP00000014096   0.000000000000707   5-61   RING finger domain, C3HC4  
ENSLACP00000014138   3.33e-40   312-388   RING finger domain, C3HC4  
ENSLACP00000014139   2.29e-40   309-385   RING finger domain, C3HC4  
ENSLACP00000014284   4.48e-16   397-446   RING finger domain, C3HC4  
  0.000000000252   99-152   RING finger domain, C3HC4  
ENSLACP00000014285   4.16e-16   420-469   RING finger domain, C3HC4  
  0.000000000236   66-119   RING finger domain, C3HC4  
ENSLACP00000014565   0.00000000000146   36-101   RING finger domain, C3HC4  
ENSLACP00000014577   9.94e-24   6-78   RING finger domain, C3HC4  
ENSLACP00000014681   1.88e-21   332-405   RING finger domain, C3HC4  
  1.2e-17   3-72   RING finger domain, C3HC4  
ENSLACP00000014776   0.0000000115   122-184   RING finger domain, C3HC4  
ENSLACP00000014838   6.19e-21   8-81   RING finger domain, C3HC4  
ENSLACP00000014839   5.61e-21   5-78   RING finger domain, C3HC4  
ENSLACP00000014965   0.0000000326   40-88   RING finger domain, C3HC4  
ENSLACP00000014971   0.0000000000154   258-307   RING finger domain, C3HC4  
ENSLACP00000014972   0.000000000011   249-298   RING finger domain, C3HC4  
ENSLACP00000015038   1.22e-24   18-98   RING finger domain, C3HC4  
ENSLACP00000015170   1.99e-16   16-98   RING finger domain, C3HC4  
ENSLACP00000015171   2.03e-16   4-86   RING finger domain, C3HC4  
ENSLACP00000015272   0.0000177   39-81   RING finger domain, C3HC4  
ENSLACP00000015349   5.3e-22   7-78   RING finger domain, C3HC4  
ENSLACP00000015440   6.63e-19   1-71   RING finger domain, C3HC4  
ENSLACP00000015452   4.12e-20   14-83   RING finger domain, C3HC4  
ENSLACP00000015501   0.000000825   518-568   RING finger domain, C3HC4  
ENSLACP00000015619   1.96e-21   27-96   RING finger domain, C3HC4  
ENSLACP00000015662   0.0000000209   40-110   RING finger domain, C3HC4  
ENSLACP00000015730   0.000000000000518   8-45   RING finger domain, C3HC4  
  0.0000226   175-206   RING finger domain, C3HC4  
ENSLACP00000015811   1.75e-22   31-101   RING finger domain, C3HC4  
ENSLACP00000015891   0.000000000199   37-89   RING finger domain, C3HC4  
ENSLACP00000015938   1.83e-23   9-79   RING finger domain, C3HC4  
ENSLACP00000016048   4.42e-24   3-75   RING finger domain, C3HC4  
ENSLACP00000016084   0.000000000000598   744-794   RING finger domain, C3HC4  
ENSLACP00000016105   8.48e-22   826-914   ZZ domain  
ENSLACP00000016107   1.32e-19   218-307   ZZ domain  
ENSLACP00000016197   7.95e-22   13-88   RING finger domain, C3HC4  
ENSLACP00000016201   5.41e-23   2-73   RING finger domain, C3HC4  
ENSLACP00000016247   2.59e-34   168-276   Zf-UBP  
ENSLACP00000016248   2.47e-34   174-282   Zf-UBP  
ENSLACP00000016316   0.00000000000283   63-130   RING finger domain, C3HC4  
ENSLACP00000016352   4.12e-21   57-136   ZZ domain  
ENSLACP00000016369   1.6e-18   11-80   RING finger domain, C3HC4  
ENSLACP00000016370   1.43e-18   23-92   RING finger domain, C3HC4  
ENSLACP00000016416   0.00000204   34-96   RING finger domain, C3HC4  
ENSLACP00000016435   4.54e-17   88-170   RING finger domain, C3HC4  
  0.000000000000332   256-311   RING finger domain, C3HC4  
  0.00000000000177   161-230   IBR domain  
ENSLACP00000016512   4.2e-22   4-76   RING finger domain, C3HC4  
ENSLACP00000016526   0.000000000707   2-51   RING finger domain, C3HC4  
ENSLACP00000016614   0.000000000000003   38-104   U-box  
ENSLACP00000016777   6.85e-16   11-79   RING finger domain, C3HC4  
ENSLACP00000016844   5.81e-38   26-117   RING finger domain, C3HC4  
ENSLACP00000016861   0.000019   31-62   RING finger domain, C3HC4  
ENSLACP00000016862   0.0000232   24-55   RING finger domain, C3HC4  
ENSLACP00000016945   0.000000371   129-165   RING finger domain, C3HC4  
  0.0335   45-100   RING finger domain, C3HC4  
ENSLACP00000016974   5.89e-18   9-77   RING finger domain, C3HC4  
ENSLACP00000017046   0.000000000000181   40-95   RING finger domain, C3HC4  
ENSLACP00000017105   0.0000003   164-200   RING finger domain, C3HC4  
  0.00447   72-135   RING finger domain, C3HC4  
ENSLACP00000017165   2.5e-21   318-383   RING finger domain, C3HC4  
ENSLACP00000017166   2.5e-21   319-384   RING finger domain, C3HC4  
ENSLACP00000017213   1.61e-21   6-75   RING finger domain, C3HC4  
ENSLACP00000017217   1.38e-20   374-440   RING finger domain, C3HC4  
ENSLACP00000017308   0.000000000000243   251-319   RING finger domain, C3HC4  
ENSLACP00000017309   0.00000000283   37-105   RING finger domain, C3HC4  
ENSLACP00000017437   1.41e-21   9-78   RING finger domain, C3HC4  
ENSLACP00000017490   0.000000000000589   161-197   RING finger domain, C3HC4  
ENSLACP00000017491   0.000000000191   164-202   RING finger domain, C3HC4  
ENSLACP00000017492   0.00000000000353   147-183   RING finger domain, C3HC4  
ENSLACP00000017506   0.000000442   678-727   RING finger domain, C3HC4  
ENSLACP00000017599   0.000000631   3-53   RING finger domain, C3HC4  
ENSLACP00000017635   4.29e-16   1101-1151   RING finger domain, C3HC4  
ENSLACP00000017687   1.64e-20   6-76   RING finger domain, C3HC4  
ENSLACP00000017840   0.000000000173   724-778   RING finger domain, C3HC4  
  0.000000206   655-715   IBR domain  
  0.000000384   571-652   RING finger domain, C3HC4  
ENSLACP00000017905   0.000000212   512-561   RING finger domain, C3HC4  
ENSLACP00000017949   0.000000053   1-43   RING finger domain, C3HC4  
ENSLACP00000017976   0.00000000000000353   217-282   RING finger domain, C3HC4  
ENSLACP00000017977   0.000000000000139   210-271   RING finger domain, C3HC4  
ENSLACP00000017978   0.000000000000141   173-240   RING finger domain, C3HC4  
ENSLACP00000017994   7.95e-23   503-574   Variant RING domain  
ENSLACP00000018031   0.00000000042   481-529   RING finger domain, C3HC4  
ENSLACP00000018114   0.000000000000924   275-324   RING finger domain, C3HC4  
ENSLACP00000018115   0.00000000000101   248-297   RING finger domain, C3HC4  
ENSLACP00000018159   0.0000000000000139   11-83   RING finger domain, C3HC4  
  0.000353   75-135   Zf-UBP  
ENSLACP00000018184   0.000000000000232   3-68   Variant RING domain  
ENSLACP00000018235   1.19e-20   10-84   RING finger domain, C3HC4  
ENSLACP00000018266   1.2e-20   18-92   RING finger domain, C3HC4  
ENSLACP00000018376   0.000000000294   8-58   RING finger domain, C3HC4  
ENSLACP00000018377   0.000000000244   8-58   RING finger domain, C3HC4  
ENSLACP00000018381   1.3e-16   101-182   RING finger domain, C3HC4  
  0.000000000000578   269-324   RING finger domain, C3HC4  
  0.0000000000106   173-241   IBR domain  
ENSLACP00000018486   8.84e-17   151-199   RING finger domain, C3HC4  
ENSLACP00000018550   0.000000000000656   14-107   RING finger domain, C3HC4  
ENSLACP00000018590   0.000000000027   14-61   RING finger domain, C3HC4  
ENSLACP00000018633   0.00000000141   560-611   RING finger domain, C3HC4  
ENSLACP00000018643   0.0000000000000177   8-75   RING finger domain, C3HC4  
ENSLACP00000018644   0.000000173   392-446   RING finger domain, C3HC4  
ENSLACP00000018653   0.000000000489   23-68   RING finger domain, C3HC4  
ENSLACP00000018888   5.81e-21   226-279   RING finger domain, C3HC4  
ENSLACP00000018962   1.14e-17   37-95   RING finger domain, C3HC4  
ENSLACP00000019020   0.0000000000766   265-325   RING finger domain, C3HC4  
ENSLACP00000019046   0.0000000053   27-78   U-box  
  0.00000283   214-267   U-box  
ENSLACP00000019047   0.0000000053   33-85   U-box  
  0.000003   228-281   U-box  
ENSLACP00000019087   1.58e-17   7-78   RING finger domain, C3HC4  
ENSLACP00000019088   1.56e-17   8-79   RING finger domain, C3HC4  
ENSLACP00000019228   1.88e-18   288-344   RING finger domain, C3HC4  
  0.00000000000000299   135-221   RING finger domain, C3HC4  
  0.000000000177   207-276   IBR domain  
ENSLACP00000019280   3.65e-17   499-575   ZZ domain  
ENSLACP00000019450   1.58e-23   202-267   RING finger domain, C3HC4  
ENSLACP00000019499   0.000000157   332-391   RING finger domain, C3HC4  
ENSLACP00000019500   0.0000000353   125-184   RING finger domain, C3HC4  
ENSLACP00000019518   2.12e-23   435-509   Variant RING domain  
ENSLACP00000019566   9.89e-16   28-81   Variant RING domain  
ENSLACP00000019682   0.0000000000141   301-352   RING finger domain, C3HC4  
ENSLACP00000019950   5.82e-20   537-601   RING finger domain, C3HC4  
ENSLACP00000019951   4.99e-20   541-605   RING finger domain, C3HC4  
ENSLACP00000020026   8.64e-21   3-89   RING finger domain, C3HC4  
ENSLACP00000020056   0.00000068   862-920   RING finger domain, C3HC4  
ENSLACP00000020094   0.0000000000000353   25-75   RING finger domain, C3HC4  
ENSLACP00000020141   5.61e-43   338-416   RING finger domain, C3HC4  
ENSLACP00000020294   3.98e-19   625-693   RING finger domain, C3HC4  
ENSLACP00000020295   4.42e-19   633-701   RING finger domain, C3HC4  
ENSLACP00000020331   0.00000000000166   292-363   RING finger domain, C3HC4  
ENSLACP00000020399   0.00000000000009   39-97   RING finger domain, C3HC4  
  0.0000024   7-37   IBR domain  
ENSLACP00000020406   0.00000000000000268   96-151   Variant RING domain  
ENSLACP00000020696   5.74e-28   985-1069   U-box  
ENSLACP00000020704   0.000000000000377   212-272   RING finger domain, C3HC4  
ENSLACP00000020730   6.45e-17   159-206   RING finger domain, C3HC4  
ENSLACP00000020802   0.00000000913   479-524   RING finger domain, C3HC4  
ENSLACP00000020861   0.0000000061   83-149   RING finger domain, C3HC4  
ENSLACP00000020862   0.00000000642   69-135   RING finger domain, C3HC4  
ENSLACP00000020883   8.84e-20   255-320   RING finger domain, C3HC4  
ENSLACP00000020900   3.3e-17   101-167   RING finger domain, C3HC4  
ENSLACP00000020980   2.17e-16   8-80   RING finger domain, C3HC4  
ENSLACP00000020984   0.0000000000000353   18-88   RING finger domain, C3HC4  
ENSLACP00000021002   0.00000133   285-346   RING finger domain, C3HC4  
ENSLACP00000021017   5.98e-16   12-74   RING finger domain, C3HC4  
ENSLACP00000021029   0.00000000119   2-62   RING finger domain, C3HC4  
ENSLACP00000021034   8.67e-20   399-503   RING finger domain, C3HC4  
ENSLACP00000021035   8.03e-20   379-483   RING finger domain, C3HC4  
ENSLACP00000021053   0.000000152   336-377   RING finger domain, C3HC4  
ENSLACP00000021054   0.000000212   330-376   RING finger domain, C3HC4  
ENSLACP00000021128   0.0000000000224   5-54   RING finger domain, C3HC4  
ENSLACP00000021146   0.000000228   313-354   RING finger domain, C3HC4  
ENSLACP00000021373   0.00000000000329   11-81   RING finger domain, C3HC4  
ENSLACP00000021461   1.63e-24   580-656   Variant RING domain  
ENSLACP00000021534   1.04e-19   8-79   RING finger domain, C3HC4  
ENSLACP00000021611   0.000000000505   358-415   RING finger domain, C3HC4  
ENSLACP00000021704   0.000000000864   269-311   RING finger domain, C3HC4  
ENSLACP00000021776   4.94e-22   58-138   ZZ domain  
  0.00000311   888-935   RING finger domain, C3HC4  
  0.00306   814-858   RING finger domain, C3HC4  
ENSLACP00000021945   9.42e-21   283-349   RING finger domain, C3HC4  
ENSLACP00000022024   0.0000486   34-87   RING finger domain, C3HC4  
ENSLACP00000022060   0.000000000000979   275-324   RING finger domain, C3HC4  
ENSLACP00000022131   0.0000000000000238   246-329   U-box  
ENSLACP00000022155   0.00000133   285-346   RING finger domain, C3HC4  
ENSLACP00000022182   0.0000000199   240-289   RING finger domain, C3HC4  
ENSLACP00000022216   0.000000000000518   6-61   RING finger domain, C3HC4  
ENSLACP00000022258   0.0000000000126   129-190   RING finger domain, C3HC4  
ENSLACP00000022292   5.82e-20   537-601   RING finger domain, C3HC4  
ENSLACP00000022324   6.82e-38   61-152   RING finger domain, C3HC4  
ENSLACP00000022374   0.0000004   226-285   U-box  
ENSLACP00000022565   0.0000000000000116   7-65   RING finger domain, C3HC4  
ENSLACP00000022712   0.000000000141   937-994   RING finger domain, C3HC4  
ENSLACP00000022732   2.43e-19   908-961   RING finger domain, C3HC4  
ENSLACP00000022882   4.77e-16   58-113   Variant RING domain  
ENSLACP00000022988   0.0000153   31-62   RING finger domain, C3HC4  
ENSLACP00000023065   0.00000000000000129   61-118   Variant RING domain  
ENSLACP00000023096   0.00000000000177   1711-1758   ZZ domain  
ENSLACP00000023176   6.47e-24   6-91   Zf-UBP  
ENSLACP00000023194   1.41e-17   23-131   Zf-UBP  
ENSLACP00000023301   0.000000000000291   8-69   RING finger domain, C3HC4  
ENSLACP00000023370   5.55e-20   360-426   RING finger domain, C3HC4  
ENSLACP00000023399   0.00000000000000185   2-88   RING finger domain, C3HC4  
  0.00219   108-163   RING finger domain, C3HC4  
ENSLACP00000023449   6.31e-21   247-300   RING finger domain, C3HC4  
ENSLACP00000023455   3.41e-22   218-306   ZZ domain  
ENSLACP00000023496   9.89e-20   220-301   ZZ domain  
ENSLACP00000023514   0.000000000000271   633-697   Variant RING domain  
ENSLACP00000023553   4.42e-19   633-701   RING finger domain, C3HC4  
ENSLACP00000023606   9.89e-18   211-285   ZZ domain  
  0.0000000000000169   343-400   RING finger domain, C3HC4  
  0.0000000187   136-202   RING finger domain, C3HC4  
ENSLACP00000023612   2.65e-24   1087-1165   U-box  
 
Weak hits:
ENSLACP00000001074   0.0194   1138-1195   RING finger domain, C3HC4  
ENSLACP00000002167   0.0115   16-44   RING finger domain, C3HC4  
ENSLACP00000002406   0.000589   36-69   Zf-UBP  
ENSLACP00000002615   0.0953   19-52   Zf-UBP  
ENSLACP00000002753   0.00224   441-473   RING finger domain, C3HC4  
ENSLACP00000002898   0.0353   324-365   RING finger domain, C3HC4  
ENSLACP00000003458   0.053   61-88   Zf-UBP  
ENSLACP00000004135   0.00678   1379-1431   RING finger domain, C3HC4  
ENSLACP00000004492   0.000219   750-780   RING finger domain, C3HC4  
ENSLACP00000004569   0.0106   23-56   RING finger domain, C3HC4  
ENSLACP00000004822   0.00757   2-44   RING finger domain, C3HC4  
ENSLACP00000005785   0.00187   183-234   RING finger domain, C3HC4  
ENSLACP00000007100   0.000318   650-687   ZZ domain  
ENSLACP00000007136   0.00023   10-66   RING finger domain, C3HC4  
ENSLACP00000007219   0.0459   6-29   RING finger domain, C3HC4  
ENSLACP00000007279   0.0335   338-406   RING finger domain, C3HC4  
ENSLACP00000009269   0.0053   13-39   RING finger domain, C3HC4  
ENSLACP00000009825   0.00012   379-429   RING finger domain, C3HC4  
ENSLACP00000010571   0.000254   11-61   RING finger domain, C3HC4  
ENSLACP00000011158   0.000129   233-286   IBR domain  
ENSLACP00000011450   0.0106   53-93   RING finger domain, C3HC4  
ENSLACP00000012443   0.0124   313-367   RING finger domain, C3HC4  
ENSLACP00000012605   0.000536   641-712   RING finger domain, C3HC4  
ENSLACP00000014623   0.0306   451-487   RING finger domain, C3HC4  
ENSLACP00000015112   0.00177   721-788   RING finger domain, C3HC4  
ENSLACP00000015826   0.0494   593-638   RING finger domain, C3HC4  
ENSLACP00000015853   0.000365   58-103   Zf-UBP  
ENSLACP00000016171   0.00053   1271-1329   RING finger domain, C3HC4  
ENSLACP00000017644   0.000512   587-640   RING finger domain, C3HC4  
ENSLACP00000017760   0.00127   591-663   RING finger domain, C3HC4  
ENSLACP00000018024   0.0172   325-367   RING finger domain, C3HC4  
ENSLACP00000018791   0.0212   35-71   U-box  
ENSLACP00000019205   0.0127   142-198   RING finger domain, C3HC4  
ENSLACP00000019717   0.0449   346-397   RING finger domain, C3HC4  
ENSLACP00000021624   0.00187   294-342   RING finger domain, C3HC4  
ENSLACP00000021948   0.000512   594-647   RING finger domain, C3HC4  
ENSLACP00000022020   0.000908   182-213   RING finger domain, C3HC4  
ENSLACP00000022188   0.0339   332-400   RING finger domain, C3HC4  
ENSLACP00000023039   0.00187   183-234   RING finger domain, C3HC4  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.