Select to display Genome Domains Proteins No ALL 151093 151093 No Homo sapiens 76_38 Human 251 246 No Pan troglodytes 76_2.1.4 Chimpanzee 58 56 No Gorilla gorilla 76_3.1 Western gorilla 65 64 No Pongo abelii 76_2 Sumatran orangutan 58 57 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 57 55 No Papio anubis 76 Olive baboon 63 60 No Macaca mulatta 76_1 Rhesus monkey 85 84 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 115 113 No Otolemur garnettii 76_3 Small-eared galago 64 63 No Microcebus murinus 76_1 Gray mouse lemur 48 47 No Rattus norvegicus 76_5.0 Norway rat 63 60 No Mus musculus 76_38 House mouse 150 146 No Dipodomys ordii 76_1 Ord's kangaroo rat 50 46 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 55 54 No Heterocephalus glaber v1.7-2 Naked mole-rat 117 115 No Cavia porcellus 76_3 Domestic guinea pig 60 58 No Oryctolagus cuniculus 76_2 Rabbit 68 67 No Ochotona princeps 76 American pika 47 45 No Tupaia belangeri 76 Northern tree shrew 50 49 No Sus scrofa 76_10.2 Pig 51 50 No Bos taurus 76_3.1 Cattle 65 63 No Ovis aries 76_3.1 Sheep 69 66 No Vicugna pacos 76_1 Alpaca 37 37 No Tursiops truncatus 76_1 Bottlenose dolphin 50 48 No Mustela putorius furo 76_1.0 Domestic ferret 54 53 No Ailuropoda melanoleuca 76_1 Giant panda 52 52 No Canis familiaris 76_3.1 Dog 71 70 No Felis catus 76_6.2 Domestic cat 52 51 No Equus caballus 76_2 Horse 52 51 No Myotis lucifugus 76_2.0 Little brown bat 63 62 No Pteropus vampyrus 76_1 Large flying fox 49 48 No Sorex araneus 76_1 European shrew 42 41 No Erinaceus europaeus 76 Western European hedgehog 47 44 No Procavia capensis 76_1 Cape rock hyrax 48 46 No Loxodonta africana 76_3 African savanna elephant 72 72 No Echinops telfairi 76 Small Madagascar hedgehog 51 50 No Dasypus novemcinctus 76_2 Nine-banded armadillo 64 64 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 54 50 No Macropus eugenii 76_1.0 Tammar wallaby 46 44 No Sarcophilus harrisii 76_7.0 Tasmanian devil 59 59 No Monodelphis domestica 76_5 Gray short-tailed opossum 59 57 No Ornithorhynchus anatinus 76_5 Platypus 49 49 No Saccoglossus kowalevskii v3.0 82 77 No Petromyzon marinus 76_7.0 Sea lamprey 33 32 No Meleagris gallopavo 76_2 Turkey 49 49 No Gallus gallus 76_4 Chicken 47 47 No Anas platyrhynchos 76_1.0 Mallard 46 46 No Taeniopygia guttata 76_3.2.4 Zebra finch 46 46 No Ficedula albicollis 76_1.0 Collared flycatcher 47 47 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 48 48 No Anolis carolinensis 76_2.0 Green anole 47 47 No Xenopus laevis African clawed frog 146 144 No Xenopus tropicalis 76_4.2 Tropical clawed frog 66 65 No Latimeria chalumnae 76_1 Coelacanth 69 68 No Lepisosteus oculatus 76 Spotted gar 63 61 No Gadus morhua 76_1 Atlantic cod 67 64 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 61 59 No Takifugu rubripes 76_4 Torafugu 96 89 No Gasterosteus aculeatus 76_1 Three-spined stickleback 78 76 No Oryzias latipes 76_1 Japanese medaka 69 67 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 62 60 No Poecilia formosa 76 Amazon molly 62 60 No Oreochromis niloticus 76_1.0 Nile tilapia 67 65 No Astyanax mexicanus 76 Mexican tetra 66 64 No Danio rerio 76_9 Zebrafish 101 98 No Oikopleura dioica 43 43 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 35 35 No Ciona intestinalis 76 Vase tunicate 35 35 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 60 58 No Adineta vaga 175 174 No Octopus bimaculoides 280 51 51 No Crassostrea gigas 22 Pacific oyster 51 47 No Lottia gigantea Owl limpet 50 50 No Helobdella robusta 41 41 No Capitella sp. I 56 55 No Danaus plexippus OGS1.0 Monarch butterfly 35 35 No Heliconius melpomene Postman butterfly 32 32 No Bombyx mori Domestic silkworm 29 29 No Nasonia vitripennis Jewel wasp 35 35 No Apis mellifera 38.2d (Not maintained) Honey bee 49 49 No Harpegnathos saltator v3.3 Jerdon's jumping ant 34 34 No Linepithema humile v1.1 Argentine ant 36 36 No Pogonomyrmex barbatus v1.2 Red harvester ant 34 34 No Solenopsis invicta v.2.2.3 Red fire ant 33 32 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 34 34 No Atta cephalotes v1.1 37 37 No Camponotus floridanus v3.3 Florida carpenter ant 38 38 No Lucilia cuprina Australian sheep blowfly 30 30 No Drosophila grimshawi 1.3 45 44 No Drosophila willistoni 1.3 44 43 No Drosophila pseudoobscura 2.13 66 65 No Drosophila persimilis 1.3 57 56 No Drosophila suzukii 44 41 No Drosophila yakuba 1.3 44 43 No Drosophila simulans 1.3 46 44 No Drosophila sechellia 1.3 46 44 No Drosophila melanogaster 76_5 Fruit fly 84 82 No Drosophila erecta 1.3 44 43 No Drosophila ananassae 1.3 47 46 No Drosophila virilis 1.2 47 46 No Drosophila mojavensis 1.3 44 44 No Megaselia scalaris 22 15 15 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 41 41 No Culex pipiens quinquefasciatus Southern house mosquito 38 37 No Anopheles darlingi 22 American malaria mosquito 22 22 No Anopheles gambiae 49_3j African malaria mosquito 37 37 No Tribolium castaneum 3.0 Red flour beetle 39 39 No Pediculus humanus corporis Human body louse 36 36 No Acyrthosiphon pisum Pea aphid 39 39 No Rhodnius prolixus 22 37 37 No Daphnia pulex Common water flea 37 37 No Strigamia maritima 22 41 39 No Sarcoptes scabiei 27 27 No Tetranychus urticae Two-spotted spider mite 37 37 No Ixodes scapularis Black-legged tick 39 37 No Pristionchus pacificus 31 31 No Meloidogyne incognita Southern root-knot nematode 60 60 No Meloidogyne hapla 29 29 No Onchocerca volvulus 22 36 35 No Brugia malayi WS250 Agent of lymphatic filariasis 39 39 No Caenorhabditis japonica 28 28 No Caenorhabditis brenneri 48 48 No Caenorhabditis remanei 33 33 No Caenorhabditis elegans 76_235 Roundworm 45 45 No Caenorhabditis briggsae 2 35 35 No Trichinella spiralis 22 30 29 No Hymenolepis microstoma 40 40 No Echinococcus multilocularis 38 38 No Echinococcus granulosus 38 38 No Taenia solium Pork tapeworm 42 42 No Schistosoma mansoni 46 46 No Mnemiopsis leidyi Sea walnut 32 32 No Thelohanellus kitauei 14 14 No Acropora digitifera v1.0 46 46 No Nematostella vectensis 1.0 Starlet sea anemone 57 57 No Hydra vulgaris 39 39 No Amphimedon queenslandica 69 69 No Trichoplax adhaerens 42 41 No Proterospongia sp. ATCC 50818 44 44 No Monosiga brevicollis 34 34 No Sphaeroforma arctica JP610 26 26 No Capsaspora owczarzaki ATCC 30864 32 32 No Conidiobolus coronatus NRRL28638 v1.0 16 16 No Mortierella verticillata NRRL 6337 30 29 No Phycomyces blakesleeanus 27 27 No Rhizopus oryzae RA 99-880 31 31 No Mucor circinelloides 27 27 No Rhizomucor miehei CAU432 25 25 No Malassezia globosa CBS 7966 30 30 No Sporisorium reilianum 22 22 22 No Ustilago maydis 21 21 No Mixia osmundae IAM 14324 v1.0 24 24 No Cronartium quercuum f. sp. fusiforme G11 v1.0 24 24 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 23 23 No Melampsora laricis-populina 22 22 No Rhodotorula graminis WP1 v1.0 23 23 No Sporobolomyces roseus IAM 13481 19 19 No Microbotryum violaceum 22 26 26 No Wallemia sebi v1.0 20 20 No Sphaerobolus stellatus v1.0 31 31 No Piloderma croceum F 1598 v1.0 30 30 No Serpula lacrymans var. lacrymans S7.9 24 24 No Coniophora puteana 25 25 No Hydnomerulius pinastri v2.0 26 26 No Paxillus rubicundulus Ve08.2h10 v1.0 24 24 No Pisolithus microcarpus 441 v1.0 30 30 No Pisolithus tinctorius Marx 270 v1.0 27 27 No Scleroderma citrinum Foug A v1.0 26 26 No Coprinopsis cinerea okayama7 130 v3 28 28 No Pleurotus ostreatus Oyster mushroom 27 27 No Amanita thiersii Skay4041 v1.0 25 25 No Amanita muscaria Koide v1.0 Fly agaric 26 26 No Galerina marginata v1.0 31 31 No Hebeloma cylindrosporum h7 v2.0 29 29 No Laccaria bicolor S238N-H82 27 27 No Agaricus bisporus var. bisporus 24 24 No Schizophyllum commune 28 28 No Stereum hirsutum FP-91666 SS1 v1.0 27 27 No Heterobasidion annosum 24 24 No Gloeophyllum trabeum v1.0 27 27 No Punctularia strigosozonata v1.0 24 24 No Sebacina vermifera MAFF 305830 v1.0 29 29 No Fomitiporia mediterranea v1.0 25 25 No Tulasnella calospora AL13/4D v1.0 26 26 No Postia placenta 41 41 No Wolfiporia cocos MD-104 SS10 v1.0 27 27 No Fomitopsis pinicola v1.0 27 27 No Fomitopsis pinicola FP-58527 SS1 v3.0 26 26 No Phanerochaete chrysosporium RP-78 2.1 23 23 No Dichomitus squalens 26 26 No Trametes versicolor v1.0 26 26 No Tremella mesenterica Witches' butter 25 25 No Daldinia eschscholzii EC12 v1.0 29 28 No Apiospora montagnei NRRL 25634 v1.0 32 31 No Magnaporthe poae ATCC 64411 22 24 23 No Magnaporthe grisea 70-15 28 28 No Podospora anserina 26 25 No Sporotrichum thermophile ATCC 42464 29 28 No Thielavia terrestris NRRL 8126 28 27 No Chaetomium globosum CBS 148.51 28 27 No Neurospora tetrasperma 25 24 No Neurospora discreta FGSC 8579 24 23 No Neurospora crassa OR74A 28 26 No Cryphonectria parasitica Chestnut blight fungus 28 27 No Verticillium albo-atrum VaMs.102 26 25 No Verticillium dahliae VdLs.17 30 29 No Acremonium alcalophilum v 1.0 27 26 No Glomerella graminicola 22 30 29 No Fusarium graminearum 28 27 No Nectria haematococca mpVI 29 28 No Fusarium oxysporum f. sp. lycopersici 4286 29 28 No Fusarium verticillioides 7600 26 25 No Trichoderma asperellum CBS 433.97 v1.0 27 26 No Trichoderma atroviride 27 26 No Trichoderma citrinoviride v1.0 27 26 No Trichoderma reesei 1.2 28 27 No Trichoderma virens Gv29-8 27 26 No Trichoderma longibrachiatum ATCC 18648 v1.0 27 26 No Trichoderma harzianum CBS 226.95 v1.0 27 26 No Amorphotheca resinae v1.0 Creosote fungus 28 27 No Botrytis cinerea B05.10 27 26 No Sclerotinia sclerotiorum 29 29 No Blumeria graminis 22 22 22 No Didymella exigua CBS 183.55 v1.0 31 30 No Leptosphaeria maculans 22 30 29 No Setosphaeria turcica v1.0 34 33 No Cochliobolus miyabeanus ATCC 44560 v1.0 31 30 No Cochliobolus victoriae FI3 v1.0 32 31 No Cochliobolus carbonum 26-R-13 v1.0 31 30 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 30 29 No Alternaria brassicicola 32 31 No Cochliobolus lunatus m118 v2.0 34 33 No Pyrenophora teres f. teres 22 33 32 No Pyrenophora tritici-repentis 30 29 No Stagonospora nodorum 35 34 No Mycosphaerella graminicola IPO323 34 33 No Zasmidium cellare ATCC 36951 v1.0 33 32 No Dothistroma septosporum 35 34 No Septoria musiva v1.0 31 30 No Mycosphaerella fijiensis CIRAD86 30 29 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 33 32 No Paracoccidioides brasiliensis Pb18 26 25 No Coccidioides posadasii RMSCC 3488 29 28 No Coccidioides immitis RS 30 29 No Ajellomyces dermatitidis SLH14081 28 27 No Histoplasma capsulatum class NAmI strain WU24 27 25 No Microsporum canis CBS 113480 28 27 No Trichophyton equinum CBS 127.97 28 27 No Trichophyton verrucosum HKI 0517 22 22 No Arthroderma benhamiae CBS 112371 22 21 No Trichophyton tonsurans CBS 112818 28 27 No Trichophyton rubrum CBS 118892 29 28 No Uncinocarpus reesii 1704 25 24 No Aspergillus zonatus v1.0 29 28 No Penicillium chrysogenum Wisconsin 54-1255 29 28 No Penicillium chrysogenum v1.0 29 28 No Aspergillus acidus v1.0 31 30 No Aspergillus fumigatus Af293 29 28 No Aspergillus brasiliensis v1.0 31 30 No Aspergillus nidulans FGSC A4 30 29 No Aspergillus sydowii v1.0 30 29 No Aspergillus versicolor v1.0 30 29 No Aspergillus glaucus 29 28 No Aspergillus carbonarius ITEM 5010 31 30 No Neosartorya fischeri NRRL 181 30 29 No Aspergillus terreus NIH2624 29 28 No Aspergillus tubingensis v1.0 31 30 No Aspergillus wentii v1.0 31 30 No Aspergillus oryzae RIB40 27 27 No Aspergillus niger 22 30 29 No Aspergillus niger ATCC 1015 21 21 No Aspergillus flavus NRRL3357 26 25 No Aspergillus clavatus NRRL 1 30 29 No Penicillium marneffei ATCC 18224 35 35 No Tuber melanosporum Mel28 22 27 26 No Tuber melanosporum Vittad Perigord truffle 27 26 No Hansenula polymorpha v2.0 19 19 No Dekkera bruxellensis CBS 2499 v2.0 19 19 No Pichia membranifaciens v1.0 19 19 No Candida tanzawaensis NRRL Y-17324 v1.0 19 19 No Candida dubliniensis CD36 19 19 No Candida tropicalis MYA-3404 20 19 No Candida parapsilosis 18 18 No Candida albicans SC5314 19 19 No Lodderomyces elongisporus NRRL YB-4239 19 19 No Babjeviella inositovora NRRL Y-12698 v1.0 21 21 No Pichia stipitis CBS 6054 19 19 No Candida guilliermondii ATCC 6260 18 18 No Hyphopichia burtonii NRRL Y-1933 v1.0 19 19 No Debaromyces hansenii 19 19 No Wickerhamomyces anomalus 23 23 No Pichia pastoris GS115 19 19 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 16 16 No Yarrowia lipolytica CLIB122 23 23 No Candida lusitaniae ATCC 42720 18 18 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 19 19 No Vanderwaltozyma polyspora DSM 70294 18 18 No Candida glabrata CBS138 17 17 No Kluyveromyces thermotolerans CBS 6340 19 19 No Lachancea kluyveri 19 19 No Kluyveromyces waltii 18 18 No Ashbya gossypii ATCC 10895 17 17 No Zygosaccharomyces rouxii 19 19 No Saccharomyces mikatae MIT 18 18 No Saccharomyces paradoxus MIT 19 19 No Saccharomyces cerevisiae 76 Baker's yeast 19 19 No Saccharomyces bayanus MIT 19 19 No Kluyveromyces lactis 18 18 No Schizosaccharomyces cryophilus OY26 22 18 18 No Schizosaccharomyces octosporus yFS286 18 18 No Schizosaccharomyces japonicus yFS275 19 19 No Schizosaccharomyces pombe Fission yeast 19 19 No Catenaria anguillulae PL171 v1.0 35 33 No Allomyces macrogynus ATCC 38327 57 54 No Spizellomyces punctatus DAOM BR117 34 33 No Dictyostelium discoideum 38 37 No Dictyostelium purpureum 39 38 No Entamoeba dispar 1.2 26 26 No Entamoeba invadens 1.2 22 22 No Entamoeba histolytica 1 26 26 No Selaginella moellendorffii 73 73 No Pinus taeda Loblolly pine 126 114 No Picea abies Norway spruce 41 40 No Eucalyptus grandis v201 Rose gum 87 87 No Theobroma cacao B97-61/B2 v1 Cacao 54 54 No Gossypium raimondii v221 296 290 No Citrus clementina v165 113 113 No Citrus sinensis v154 Sweet orange 138 138 No Thellungiella halophila v173 176 176 No Brassica rapa Chiifu-401 1.2 Field mustard 108 108 No Capsella rubella v183 66 66 No Arabidopsis lyrata Lyrate rockcress 64 64 No Arabidopsis thaliana 10 Thale cress 94 94 No Carica papaya Papaya 43 43 No Medicago truncatula Barrel medic 109 108 No Phaseolus vulgaris v186 French bean 61 61 No Glycine max v109 Soybean 178 178 No Cucumis sativus v122 Cucumber 73 73 No Fragaria vesca Wild strawberry 63 63 No Malus domestica v196 Apple 149 146 No Prunus persica v139 Peach 72 71 No Linum usitatissimum v200 Flax 85 85 No Manihot esculenta v147 Cassava 98 98 No Populus trichocarpa v156 Black cottonwood 104 104 No Vitis vinifera Wine grape 49 49 No Mimulus guttatus v140 Spotted monkey flower 71 71 No Solanum lycopersicum v.2.3 Tomato 69 68 No Solanum tuberosum Potato 103 102 No Actinidia chinensis Hongyang 83 81 No Aquilegia coerulea v195 80 80 No Triticum urartu 22 56 56 No Triticum aestivum 22 Bread wheat 210 210 No Aegilops tauschii 22 73 70 No Brachypodium distachyon Stiff brome 86 86 No Oryza barthii 22 African wild rice 96 84 No Oryza meridionalis 22 76 69 No Oryza glumaepatula 22 87 76 No Oryza glaberrima African rice 49 49 No Oryza punctata 22 79 74 No Oryza nivara 22 87 84 No Oryza brachyantha 22 Malo sina 55 55 No Oryza sativa ssp. japonica 5.0 Japanese rice 95 95 No Oryza sativa v193 Rice 95 95 No Phyllostachys heterocycla var. pubescens Kikko-chiku 83 80 No Panicum virgatum v202 Switchgrass 163 163 No Setaria italica v164 Foxtail millet 87 87 No Zea mays subsp. mays Maize 187 187 No Zea mays v181 Maize 216 215 No Sorghum bicolor Sorghum 59 56 No Musa balbisiana Balbis banana 86 82 No Musa acuminata 22 Wild Malaysian banana 100 99 No Amborella trichopoda 22 45 45 No Physcomitrella patens 49 49 No Coccomyxa subellipsoidea sp. C-169 v2 30 29 No Asterochloris sp. Cgr/DA1pho v1.0 22 22 No Chlorella variabilis sp. NC64A 32 31 No Chlorella vulgaris 30 29 No Volvox carteri f. nagariensis 26 26 No Volvox carteri v199 26 26 No Chlamydomonas reinhardtii 4.0 28 28 No Ostreococcus sp. RCC809 22 22 No Ostreococcus lucimarinus CCE9901 18 18 No Ostreococcus tauri 22 22 No Bathycoccus prasinos 23 22 No Micromonas sp. RCC299 24 23 No Micromonas pusilla CCMP1545 v3.0 26 26 No Cyanidioschyzon merolae strain 10D 22 19 19 No Cyanidioschyzon merolae 20 20 No Porphyridium purpureum 02_2012 23 23 No Thecamonas trahens ATCC 50062 37 36 No Bigelowiella natans CCMP2755 22 46 46 No Giardia lamblia 2.3 13 13 No Cyanophora paradoxa 27 27 No Leishmania mexicana 2.4 21 21 No Leishmania major strain Friedlin 20 20 No Leishmania infantum JPCM5 2.4 20 20 No Leishmania braziliensis MHOM/BR/75/M2904 2.4 24 24 No Trypanosoma vivax 20 20 No Trypanosoma cruzi strain CL Brener 26 26 No Trypanosoma congolense 2.4 22 22 No Trypanosoma brucei gambiense v4.1 20 20 No Trypanosoma brucei TREU927 v4.1 21 21 No Ectocarpus siliculosus 41 40 No Aureococcus anophagefferens 27 27 No Albugo laibachii 22 24 24 No Pythium iwayamai DAOM BR242034 22 31 30 No Pythium arrhenomanes ATCC 12531 22 28 28 No Pythium ultimum v1.7-2 27 27 No Pythium aphanidermatum DAOM BR444 22 26 26 No Pythium irregulare DAOM BR486 22 27 27 No Pythium vexans DAOM BR484 22 28 27 No Phytophthora ramorum 1.1 Sudden oak death agent 26 26 No Phytophthora sojae 1.1 25 25 No Phytophthora infestans T30-4 28 28 No Phytophthora capsici 22 22 No Hyaloperonospora arabidopsidis 22 25 25 No Phaeodactylum tricornutum CCAP 1055/1 23 23 No Fragilariopsis cylindrus 43 43 No Thalassiosira pseudonana CCMP1335 25 25 No Perkinsus marinus ATCC 50983 52 51 No Paramecium tetraurelia 82 82 No Tetrahymena thermophila SB210 1 50 50 No Ichthyophthirius multifiliis strain G5 30 30 No Cryptosporidium hominis 9 9 No Cryptosporidium muris 18 18 No Cryptosporidium parvum Iowa II 17 17 No Neospora caninum 20 20 No Toxoplasma gondii VEG 21 21 No Toxoplasma gondii ME49 21 21 No Toxoplasma gondii GT1 21 21 No Babesia bovis T2Bo 34 34 No Theileria parva 14 14 No Theileria annulata 15 15 No Plasmodium falciparum 3D7 18 18 No Plasmodium vivax SaI-1 7.0 17 17 No Plasmodium knowlesi strain H 17 17 No Plasmodium yoelii ssp. yoelii 1 16 16 No Plasmodium chabaudi 17 17 No Plasmodium berghei ANKA 17 17 No Symbiodinium minutum clade B1 v1.2 70 68 No Naegleria gruberi 40 40 No Trichomonas vaginalis 48 48 No Guillardia theta CCMP2712 v1.0 41 40 No Emiliania huxleyi CCMP1516 76 73 No Acaryochloris marina MBIC11017 1 1 No Gloeocapsa sp. PCC 7428 1 1 No Rivularia sp. PCC 7116 1 1 No Frankia alni ACN14a 1 1 No Streptomyces scabiei 87.22 2 2 No Actinoplanes missouriensis 431 1 1 No Arthrobacter sp. FB24 1 1 No Flexibacter litoralis DSM 6794 1 1 No Runella slithyformis DSM 19594 1 1 No Isosphaera pallida ATCC 43644 1 1 No Pirellula staleyi DSM 6068 2 2 No Turneriella parva DSM 21527 1 1 No Candidatus Chloracidobacterium thermophilum B 1 1 No Granulicella mallensis MP5ACTX8 2 2 No Syntrophus aciditrophicus SB 1 1 No Desulfotalea psychrophila LSv54 1 1 No Desulfobulbus propionicus DSM 2032 1 1 No Desulfomicrobium baculatum DSM 4028 1 1 No Pusillimonas sp. T7-7 1 1 No Magnetococcus marinus MC-1 1 1 No Sphingomonas sp. MM-1 1 1 No Roseobacter denitrificans OCh 114 1 1 No Parvibaculum lavamentivorans DS-1 1 1 No Candidatus Caldiarchaeum subterraneum 1 1 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 138 135 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 63 61 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 39 39 No Ascaris suum Victoria/Ghent Pig roundworm 40 40 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 38 38 No Cryptococcus neoformans var. grubii H99 25 25 No Cryptococcus neoformans B-3501A 24 24 No Cryptococcus neoformans JEC21 23 23 No Paracoccidioides brasiliensis Pb01 26 25 No Paracoccidioides brasiliensis Pb03 25 23 No Coccidioides posadasii str. Silveira 29 28 No Coccidioides immitis RMSCC 3703 27 26 No Coccidioides immitis RMSCC 2394 29 28 No Coccidioides immitis H538.4 28 28 No Ajellomyces dermatitidis ER-3 28 27 No Histoplasma capsulatum H143 26 24 No Histoplasma capsulatum H88 27 25 No Histoplasma capsulatum G186AR 29 27 No Aspergillus fumigatus A1163 30 29 No Candida albicans WO-1 17 17 No Saccharomyces cerevisiae UC5 17 17 No Saccharomyces cerevisiae PW5 18 18 No Saccharomyces cerevisiae FL100 11 11 No Saccharomyces cerevisiae CLIB382 4 4 No Saccharomyces cerevisiae CLIB324 11 11 No Saccharomyces cerevisiae CBS7960 16 16 No Saccharomyces cerevisiae YJM269 17 17 No Saccharomyces cerevisiae T7 20 20 No Saccharomyces cerevisiae FostersB 15 15 No Saccharomyces cerevisiae FostersO 17 17 No Saccharomyces cerevisiae VL3 19 19 No Saccharomyces cerevisiae Vin13 17 17 No Saccharomyces cerevisiae LalvinQA23 18 18 No Saccharomyces cerevisiae AWRI796 19 19 No Saccharomyces cerevisiae Sigma1278b 19 19 No Saccharomyces cerevisiae W303 19 19 No Saccharomyces cerevisiae JAY291 19 19 No Saccharomyces cerevisiae AWRI1631 15 15 No Saccharomyces cerevisiae YPS163 8 8 No Saccharomyces cerevisiae M22 9 9 No Saccharomyces cerevisiae T73 7 7 No Saccharomyces cerevisiae CLIB215 18 18 No Saccharomyces cerevisiae Y10 10 10 No Saccharomyces cerevisiae YJM789 20 20 No Saccharomyces cerevisiae YJM789 20 20 No Saccharomyces cerevisiae RM11-1a 20 20 No Saccharomyces cerevisiae RM11-1a 20 20 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 19 19 No Schizosaccharomyces pombe 972h- 19 19 No Batrachochytrium dendrobatidis JEL423 29 29 No Batrachochytrium dendrobatidis JAM81 26 26 No Theobroma cacao Matina 1-6 v0.9 Cacao 52 51 No Hordeum vulgare 22 Domesticated barley 71 71 No Oryza sativa ssp. Indica (Subspecies) Long-grained rice 60 60 No Trypanosoma brucei Lister 427 v4.1 20 20 No Neospora caninum Nc-Liverpool 6.2 20 20 No Plasmodium falciparum HB3 16 16 No Plasmodium falciparum Dd2 9 9 No Crinalium epipsammum PCC 9333 1 1 No Calothrix parietina Calothrix sp. PCC 6303 1 1 No Propionibacterium acidipropionici ATCC 4875 1 1 No Clostridium saccharoperbutylacetonicum N1-4(HMT) 1 1 No Enterococcus faecium Aus0085 1 1 No Singulisphaera acidiphila DSM 18658 1 1 No Desulfocapsa sulfexigens DSM 10523 1 1 No Myxococcus stipitatus DSM 14675 1 1 No Ralstonia solanacearum CMR15 1 1 No Burkholderia cenocepacia MC0-3 1 1 No Octadecabacter antarcticus 307 1 1 No Rhizobium etli CFN 42 1 1 No Pseudomonas stutzeri DSM 10701 1 1 No Methylophaga sp. JAM7 1 1 No Homo sapiens 75_37 (old version GRC) Human 265 259 No Homo sapiens Human 101 99 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 67 64 No Heliconius numata 25 25 No Loa loa v3.3 (Request) Eye worm 38 37 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 41 41 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 31 No Moniliophthora perniciosa FA553 15 15 No Encephalitozoon intestinalis 9 9 No Encephalitozoon cuniculi (endoparasite) 8 8 No Picea sitchensis Sitka spruce 16 16 No Lotus japonicus 57 57 No Malus x domestica (Duplicate) Apple 149 146 No Ricinus communis Castor bean 47 47 No Nicotiana benthamiana 0.4.4 (Early draft) 130 124 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 68 67 No Solanum lycopersicum v2.3 (Early assembly) Tomato 69 68 No Phoenix dactylifera Date palm 55 55 No Guillardia theta (nucleomorph) 3 3 No Homo sapiens 69_37 Human 59 57 No Pan troglodytes 69_2.1.4 Chimpanzee 56 54 No Gorilla gorilla 69_3.1 Western gorilla 55 54 No Pongo abelii 69_2 Sumatran orangutan 57 56 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 53 51 No Macaca mulatta 69_1 Rhesus monkey 61 60 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 57 56 No Otolemur garnettii 69_3 Small-eared galago 63 62 No Microcebus murinus 69_1 Gray mouse lemur 48 47 No Rattus norvegicus 69_3.4 Norway rat 64 61 No Mus musculus 69_38 House mouse 65 62 No Dipodomys ordii 69_1 Ord's kangaroo rat 50 46 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 53 52 No Cavia porcellus 69_3 Domestic guinea pig 60 58 No Oryctolagus cuniculus 69_2 Rabbit 66 65 No Ochotona princeps 69 American pika 47 45 No Tupaia belangeri 69 Northern tree shrew 50 49 No Sus scrofa 69_10.2 Pig 49 48 No Bos taurus 69_3.1 Cattle 64 62 No Vicugna pacos 69_1 Alpaca 37 37 No Tursiops truncatus 69_1 Bottlenose dolphin 50 48 No Mustela putorius furo 69_1.0 Domestic ferret 54 53 No Ailuropoda melanoleuca 69_1 Giant panda 49 49 No Canis familiaris 69_3.1 Dog 65 64 No Felis catus 69 Domestic cat 39 39 No Equus caballus 69_2 Horse 50 49 No Myotis lucifugus 69_2.0 Little brown bat 61 60 No Pteropus vampyrus 69_1 Large flying fox 49 48 No Sorex araneus 69_1 European shrew 42 41 No Erinaceus europaeus 69 Western European hedgehog 47 44 No Procavia capensis 69_1 Cape rock hyrax 48 46 No Loxodonta africana 69_3 African savanna elephant 59 59 No Echinops telfairi 69 Small Madagascar hedgehog 51 50 No Dasypus novemcinctus 69_2 Nine-banded armadillo 46 43 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 54 50 No Macropus eugenii 69_1.0 Tammar wallaby 46 44 No Sarcophilus harrisii 69_7.0 Tasmanian devil 52 52 No Monodelphis domestica 69_5 Gray short-tailed opossum 53 52 No Ornithorhynchus anatinus 69_5 Platypus 48 48 No Petromyzon marinus 69_7.0 Sea lamprey 31 30 No Meleagris gallopavo 69_2 Turkey 45 45 No Gallus gallus 69_2 Chicken 42 42 No Taeniopygia guttata 69_3.2.4 Zebra finch 45 45 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 45 45 No Anolis carolinensis 69_2.0 Green anole 42 42 No Xenopus tropicalis 69_4.2 Tropical clawed frog 54 53 No Latimeria chalumnae 69_1 Coelacanth 52 51 No Gadus morhua 69_1 Atlantic cod 65 62 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 59 57 No Takifugu rubripes 69_4 Torafugu 54 52 No Gasterosteus aculeatus 69_1 Three-spined stickleback 59 57 No Oryzias latipes 69_1 Japanese medaka 54 52 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 62 60 No Oreochromis niloticus 69_1.0 Nile tilapia 61 59 No Danio rerio 69_9 Zebrafish 65 63 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 30 30 No Ciona intestinalis 69 Vase tunicate 35 35 No Drosophila melanogaster 69_5 Fruit fly 43 42 No Caenorhabditis elegans 69_215 Roundworm 35 35 No Saccharomyces cerevisiae 69_4 Baker's yeast 19 19 No Arabidopsis thaliana 10 Thale cress 57 57 No 2_050719S (meta-genome) 2 2 No 3_Below_base_of_euphotic (meta-genome) 1 1 No 4_050719Q (meta-genome) 1 1 No 5_050719P (meta-genome) 2 2 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 3 3 No Atta cephalotes fungus garden (ACEF) (meta-genome) 3 3 No Core Eukaryotic Genes 458 (CEGMA) 30 30 No Cyphomyrmex longiscapus fungus garden (meta-genome) 1 1 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 4 4 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 7 7 No Dump top (Dump top) (meta-genome) 3 3 No Endophytic microbiome from Rice (meta-genome) 1 1 No Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 1 1 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 2 2 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 1 1 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 1 1 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 4 4 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 2 2 No Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 1 1 No Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 7 7 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 3 3 No Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 2 2 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 1 1 No NCBI 2017_08 genome 47881 47090 No Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 1 1 No Protozoadb 2010_08 (Protozoadb) 718 718 No Soil microbial communities from Minnesota Farm (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 6 6 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 5 5 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 6 6 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 3 3 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 3 3 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 2 2 No STRING v9.0.5 (STRING) 4465 4398 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 1 1 Yes Uniprot 2018_03 genome 56727 55734 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 2 2 No Global Ocean Sampling Expedition (GOS) 353 352 No NCBI plasmid sequences (Plasmids) 8 8 No NCBI viral sequences (Viral) 28 24 No PDB chains (SCOP 1.75 ) (PDB) 68 68 No Protein Data Bank (all PDB sequenc) 464 464 No SCOP2 SCOPe CATH ECOD (all domain sequ) 1163 1163 No TargetDB 204 199 No UniProt 13 12
