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  Home > Genomes > Sarcophilus harrisii 76_7.0 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
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Sarcophilus harrisii 76_7.0

Assignment details

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Sarcophilus harrisii 76_7.0 has 281 significant domains in 61 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSHAP00000001392   4.98e-21   453-527   Complement control module/SCR domain  
  1.28e-17   583-650   Complement control module/SCR domain  
  0.0000000000000931   334-389   Complement control module/SCR domain  
  0.00000000000017   206-268   Complement control module/SCR domain  
  0.00000000000175   396-454   Complement control module/SCR domain  
  0.00000000001   273-327   Complement control module/SCR domain  
  0.0000000000432   526-585   Complement control module/SCR domain  
  0.00000000472   90-147   Complement control module/SCR domain  
  0.0000000751   154-214   Complement control module/SCR domain  
  0.0000524   39-94   Complement control module/SCR domain  
ENSSHAP00000001393   5.11e-21   454-528   Complement control module/SCR domain  
  5.95e-18   584-654   Complement control module/SCR domain  
  0.000000000000097   335-390   Complement control module/SCR domain  
  0.000000000000183   207-269   Complement control module/SCR domain  
  0.00000000000175   397-455   Complement control module/SCR domain  
  0.0000000000104   274-328   Complement control module/SCR domain  
  0.0000000000445   527-586   Complement control module/SCR domain  
  0.00000000486   91-148   Complement control module/SCR domain  
  0.0000000778   155-215   Complement control module/SCR domain  
  0.0000537   40-95   Complement control module/SCR domain  
ENSSHAP00000001394   4.98e-21   453-527   Complement control module/SCR domain  
  5.49e-18   583-653   Complement control module/SCR domain  
  0.0000000000000957   334-389   Complement control module/SCR domain  
  0.00000000000017   206-268   Complement control module/SCR domain  
  0.00000000000175   396-454   Complement control module/SCR domain  
  0.0000000000103   273-327   Complement control module/SCR domain  
  0.0000000000445   526-585   Complement control module/SCR domain  
  0.00000000486   90-147   Complement control module/SCR domain  
  0.0000000778   154-214   Complement control module/SCR domain  
  0.0000537   39-94   Complement control module/SCR domain  
ENSSHAP00000001395   4.98e-21   453-527   Complement control module/SCR domain  
  6.41e-18   583-652   Complement control module/SCR domain  
  0.0000000000000944   334-389   Complement control module/SCR domain  
  0.00000000000017   206-268   Complement control module/SCR domain  
  0.00000000000175   396-454   Complement control module/SCR domain  
  0.0000000000101   273-327   Complement control module/SCR domain  
  0.0000000000445   526-585   Complement control module/SCR domain  
  0.00000000486   90-147   Complement control module/SCR domain  
  0.0000000764   154-214   Complement control module/SCR domain  
  0.0000537   39-94   Complement control module/SCR domain  
ENSSHAP00000001442   0.0000000000796   10-71   Complement control module/SCR domain  
ENSSHAP00000002247   0.0000000000000111   253-311   Complement control module/SCR domain  
  0.0000000000000347   106-168   Complement control module/SCR domain  
  0.000000000792   69-121   Complement control module/SCR domain  
ENSSHAP00000003064   0.00000000000000375   116-178   Complement control module/SCR domain  
  0.0000000000000667   263-322   Complement control module/SCR domain  
  0.00000000959   78-126   Complement control module/SCR domain  
ENSSHAP00000003265   5.9e-17   82-153   Complement control module/SCR domain  
  0.00000000000000114   532-603   Complement control module/SCR domain  
  0.00000000000000537   274-335   Complement control module/SCR domain  
  0.00000000000000584   142-209   Complement control module/SCR domain  
  0.0000000000000104   653-722   Complement control module/SCR domain  
  0.0000000000000167   339-406   Complement control module/SCR domain  
  0.000000000000341   593-664   Complement control module/SCR domain  
  0.000000000000786   213-271   Complement control module/SCR domain  
  0.00000000000459   467-526   Complement control module/SCR domain  
  0.0000000000148   395-461   Complement control module/SCR domain  
  0.0000000000419   728-780   Complement control module/SCR domain  
  0.000000256   22-86   Complement control module/SCR domain  
ENSSHAP00000003266   3.41e-17   82-153   Complement control module/SCR domain  
  0.00000000000000315   274-335   Complement control module/SCR domain  
  0.00000000000000347   142-209   Complement control module/SCR domain  
  0.00000000000000612   456-525   Complement control module/SCR domain  
  0.000000000000135   339-406   Complement control module/SCR domain  
  0.000000000000144   396-467   Complement control module/SCR domain  
  0.000000000000486   213-271   Complement control module/SCR domain  
  0.000000197   22-85   Complement control module/SCR domain  
ENSSHAP00000003461   0.00000000000000137   859-920   Complement control module/SCR domain  
  0.000000000000354   623-684   Complement control module/SCR domain  
  0.00000000000229   801-861   Complement control module/SCR domain  
  0.00000000000852   249-310   Complement control module/SCR domain  
  0.000000000017   674-735   Complement control module/SCR domain  
  0.0000000000236   375-430   Complement control module/SCR domain  
  0.0000000000275   316-372   Complement control module/SCR domain  
  0.0000000000446   733-795   Complement control module/SCR domain  
  0.0000000000511   493-548   Complement control module/SCR domain  
  0.0000000000655   554-632   Complement control module/SCR domain  
  0.000000236   79-135   Complement control module/SCR domain  
  0.000000236   134-192   Complement control module/SCR domain  
  0.0000197   4-73   Complement control module/SCR domain  
  0.0000262   195-258   Complement control module/SCR domain  
ENSSHAP00000003639   2.36e-17   612-672   Complement control module/SCR domain  
ENSSHAP00000004028   6.95e-19   2571-2639   Complement control module/SCR domain  
  9.03e-19   2331-2399   Complement control module/SCR domain  
  4.99e-18   2747-2816   Complement control module/SCR domain  
  6.48e-17   2388-2455   Complement control module/SCR domain  
  6.48e-16   2687-2752   Complement control module/SCR domain  
  8.2e-16   2867-2935   Complement control module/SCR domain  
  0.00000000000000175   13-85   Complement control module/SCR domain  
  0.00000000000000181   2629-2698   Complement control module/SCR domain  
  0.00000000000000256   2447-2514   Complement control module/SCR domain  
  0.00000000000000431   2273-2335   Complement control module/SCR domain  
  0.00000000000000526   1737-1805   Complement control module/SCR domain  
  0.0000000000000106   2503-2564   Complement control module/SCR domain  
  0.0000000000000229   1564-1626   Complement control module/SCR domain  
  0.0000000000000405   1212-1279   Complement control module/SCR domain  
  0.0000000000000653   537-597   Complement control module/SCR domain  
  0.0000000000000675   2081-2154   Complement control module/SCR domain  
  0.000000000000181   2799-2861   Complement control module/SCR domain  
  0.000000000000445   191-253   Complement control module/SCR domain  
  0.000000000000917   2144-2213   Complement control module/SCR domain  
  0.00000000000292   1390-1454   Complement control module/SCR domain  
  0.00000000000351   1907-1970   Complement control module/SCR domain  
  0.00000000000542   362-430   Complement control module/SCR domain  
  0.00000000000723   2217-2283   Complement control module/SCR domain  
  0.0000000000131   2926-2984   Complement control module/SCR domain  
  0.0000000000297   710-772   Complement control module/SCR domain  
ENSSHAP00000005068   0.000000005   103-157   Complement control module/SCR domain  
  0.0000101   54-101   Complement control module/SCR domain  
ENSSHAP00000005709   2.29e-21   1375-1446   Complement control module/SCR domain  
  2.16e-19   1019-1087   Complement control module/SCR domain  
  7.64e-19   1316-1386   Complement control module/SCR domain  
  2.08e-18   1076-1144   Complement control module/SCR domain  
  8.23e-18   1135-1201   Complement control module/SCR domain  
  1.89e-16   1435-1504   Complement control module/SCR domain  
  3.47e-16   960-1023   Complement control module/SCR domain  
  9.31e-16   833-900   Complement control module/SCR domain  
  0.00000000000000128   1494-1550   Complement control module/SCR domain  
  0.00000000000000292   426-495   Complement control module/SCR domain  
  0.00000000000000542   1190-1251   Complement control module/SCR domain  
  0.0000000000000109   1555-1623   Complement control module/SCR domain  
  0.0000000000000167   771-844   Complement control module/SCR domain  
  0.0000000000000189   254-316   Complement control module/SCR domain  
  0.000000000000222   80-146   Complement control module/SCR domain  
  0.00000000000108   1614-1672   Complement control module/SCR domain  
  0.00000000000133   907-971   Complement control module/SCR domain  
  0.0000000000351   597-660   Complement control module/SCR domain  
  0.0000000598   1258-1327   Complement control module/SCR domain  
ENSSHAP00000005825   4.45e-19   678-746   Complement control module/SCR domain  
  1.31e-18   86-155   Complement control module/SCR domain  
  7.56e-18   383-452   Complement control module/SCR domain  
  7.56e-18   619-683   Complement control module/SCR domain  
  1.53e-17   561-624   Complement control module/SCR domain  
  1.62e-17   266-336   Complement control module/SCR domain  
  2.29e-17   789-853   Complement control module/SCR domain  
  1.89e-16   441-508   Complement control module/SCR domain  
  3.61e-16   325-394   Complement control module/SCR domain  
  0.00000000000000418   849-914   Complement control module/SCR domain  
  0.00000000000000806   904-968   Complement control module/SCR domain  
  0.0000000000000189   492-560   Complement control module/SCR domain  
  0.0000000000000324   146-215   Complement control module/SCR domain  
  0.0000000000000903   209-277   Complement control module/SCR domain  
  0.00000000000158   735-794   Complement control module/SCR domain  
  0.000000000361   25-92   Complement control module/SCR domain  
ENSSHAP00000006017   2.22e-20   5-73   Complement control module/SCR domain  
  1.62e-18   62-131   Complement control module/SCR domain  
  1.31e-16   420-489   Complement control module/SCR domain  
  4.45e-16   478-535   Complement control module/SCR domain  
  5.67e-16   358-417   Complement control module/SCR domain  
  0.00000000000000121   299-363   Complement control module/SCR domain  
  0.00000000000000661   540-608   Complement control module/SCR domain  
  0.00000000000000862   114-181   Complement control module/SCR domain  
  0.00000000000903   599-657   Complement control module/SCR domain  
ENSSHAP00000006298   2.36e-20   264-343   Complement control module/SCR domain  
  1.57e-16   83-149   Complement control module/SCR domain  
  0.000000000000642   140-214   Complement control module/SCR domain  
  0.00000000000202   205-267   Complement control module/SCR domain  
  0.0000000000157   22-93   Complement control module/SCR domain  
ENSSHAP00000007594   0.000000000000222   280-350   Complement control module/SCR domain  
ENSSHAP00000007595   0.000000000000222   282-352   Complement control module/SCR domain  
ENSSHAP00000008458   0.0000000000445   3302-3361   Complement control module/SCR domain  
ENSSHAP00000008459   0.000000000025   1951-2010   Complement control module/SCR domain  
ENSSHAP00000008460   0.000000000025   1954-2013   Complement control module/SCR domain  
ENSSHAP00000009469   0.000000000139   1479-1553   Complement control module/SCR domain  
  0.00000153   1419-1485   Complement control module/SCR domain  
  0.000012   1545-1602   Complement control module/SCR domain  
ENSSHAP00000010100   0.00000000000126   600-661   Complement control module/SCR domain  
  0.00000000000264   83-143   Complement control module/SCR domain  
  0.00000000000264   666-722   Complement control module/SCR domain  
  0.0000167   23-74   Complement control module/SCR domain  
  0.0000361   546-586   Complement control module/SCR domain  
ENSSHAP00000010101   0.000000000000667   94-155   Complement control module/SCR domain  
  0.00000000000139   160-216   Complement control module/SCR domain  
  0.0000167   40-80   Complement control module/SCR domain  
ENSSHAP00000010460   0.00000000000000195   887-951   Complement control module/SCR domain  
  0.00000000000000584   18-82   Complement control module/SCR domain  
  0.0000000000000236   712-781   Complement control module/SCR domain  
  0.0000000000000283   188-248   Complement control module/SCR domain  
  0.0000000000000375   367-427   Complement control module/SCR domain  
  0.0000000000000375   1235-1298   Complement control module/SCR domain  
  0.0000000000000612   1059-1123   Complement control module/SCR domain  
  0.00000000000132   542-604   Complement control module/SCR domain  
ENSSHAP00000011304   9.03e-16   326-399   Complement control module/SCR domain  
  0.00000000000000347   388-460   Complement control module/SCR domain  
  0.00000000000000796   506-572   Complement control module/SCR domain  
  0.00000000000000946   444-510   Complement control module/SCR domain  
  0.000000000000153   259-325   Complement control module/SCR domain  
  0.00000000000278   211-270   Complement control module/SCR domain  
  0.00000000000347   568-633   Complement control module/SCR domain  
  0.00000000000542   680-741   Complement control module/SCR domain  
ENSSHAP00000011305   7.78e-16   316-389   Complement control module/SCR domain  
  0.00000000000000347   378-450   Complement control module/SCR domain  
  0.00000000000000715   496-562   Complement control module/SCR domain  
  0.00000000000000903   434-500   Complement control module/SCR domain  
  0.000000000000139   249-315   Complement control module/SCR domain  
  0.000000000000153   563-633   Complement control module/SCR domain  
  0.000000000000208   620-685   Complement control module/SCR domain  
  0.0000000000025   201-259   Complement control module/SCR domain  
ENSSHAP00000011546   0.00000000000000354   286-349   Complement control module/SCR domain  
  0.000000000000144   640-698   Complement control module/SCR domain  
  0.000000000000337   700-762   Complement control module/SCR domain  
  0.00000000000275   767-826   Complement control module/SCR domain  
  0.0000000197   461-526   Complement control module/SCR domain  
ENSSHAP00000012060   0.0000000000000473   252-317   Complement control module/SCR domain  
  0.000000000000162   195-268   Complement control module/SCR domain  
  0.000000000000208   314-379   Complement control module/SCR domain  
ENSSHAP00000012061   0.000000000000132   252-317   Complement control module/SCR domain  
  0.000000000000195   197-260   Complement control module/SCR domain  
ENSSHAP00000012321   6.67e-17   307-380   Complement control module/SCR domain  
  3.89e-16   433-506   Complement control module/SCR domain  
  9.45e-16   496-566   Complement control module/SCR domain  
  0.00000000000000236   369-443   Complement control module/SCR domain  
  0.0000000000000486   246-312   Complement control module/SCR domain  
  0.000000000000334   552-617   Complement control module/SCR domain  
  0.000000000000598   184-255   Complement control module/SCR domain  
ENSSHAP00000012322   5.98e-17   309-382   Complement control module/SCR domain  
  9.59e-16   435-505   Complement control module/SCR domain  
  0.00000000000000153   371-445   Complement control module/SCR domain  
  0.00000000000005   241-307   Complement control module/SCR domain  
  0.000000000000292   491-556   Complement control module/SCR domain  
  0.000000000000528   186-257   Complement control module/SCR domain  
ENSSHAP00000012409   0.000000000000903   27-91   Complement control module/SCR domain  
ENSSHAP00000012577   0.0000000000903   1412-1479   Complement control module/SCR domain  
  0.00000000236   1343-1415   Complement control module/SCR domain  
  0.0000000792   1282-1348   Complement control module/SCR domain  
  0.0000136   1212-1285   Complement control module/SCR domain  
ENSSHAP00000012580   0.0000389   10-41   Complement control module/SCR domain  
ENSSHAP00000012709   0.00000264   17-76   Complement control module/SCR domain  
  0.0000116   115-173   Complement control module/SCR domain  
ENSSHAP00000013100   0.00000000000653   625-694   Complement control module/SCR domain  
ENSSHAP00000013101   0.00000000000639   625-694   Complement control module/SCR domain  
ENSSHAP00000013782   0.000000000000917   1203-1263   Complement control module/SCR domain  
ENSSHAP00000014221   0.00000000378   644-707   Complement control module/SCR domain  
  0.00000054   698-756   Complement control module/SCR domain  
ENSSHAP00000014996   0.000000000000236   189-261   Complement control module/SCR domain  
  0.000000000337   251-311   Complement control module/SCR domain  
  0.00000000162   63-124   Complement control module/SCR domain  
  0.0000000433   131-188   Complement control module/SCR domain  
ENSSHAP00000015581   0.00000000000000612   641-706   Complement control module/SCR domain  
  0.000000000000865   768-827   Complement control module/SCR domain  
  0.00000000000153   700-762   Complement control module/SCR domain  
  0.0000000000417   285-346   Complement control module/SCR domain  
ENSSHAP00000015805   0.00000000000167   571-634   Complement control module/SCR domain  
  0.000000264   626-688   Complement control module/SCR domain  
ENSSHAP00000015806   0.00000000000167   558-621   Complement control module/SCR domain  
  0.000000264   613-675   Complement control module/SCR domain  
ENSSHAP00000015870   0.000000000000195   2-73   Complement control module/SCR domain  
ENSSHAP00000016354   0.000000000000117   366-437   Complement control module/SCR domain  
  0.000000000000139   300-369   Complement control module/SCR domain  
ENSSHAP00000016857   0.0000000000153   204-264   Complement control module/SCR domain  
ENSSHAP00000017080   0.00000000000000138   12-72   Complement control module/SCR domain  
ENSSHAP00000017826   0.000000000000292   306-375   Complement control module/SCR domain  
ENSSHAP00000018007   0.0000000000000125   686-751   Complement control module/SCR domain  
  0.000000000000653   812-872   Complement control module/SCR domain  
  0.00000000000236   745-807   Complement control module/SCR domain  
  0.00000000000389   332-397   Complement control module/SCR domain  
  0.000000000195   508-572   Complement control module/SCR domain  
ENSSHAP00000018754   7.92e-17   79-147   Complement control module/SCR domain  
ENSSHAP00000018755   7.23e-17   66-134   Complement control module/SCR domain  
ENSSHAP00000019365   0.00000000000264   1941-2001   Complement control module/SCR domain  
ENSSHAP00000019461   0.000000000000222   370-441   Complement control module/SCR domain  
  0.00000000000806   316-373   Complement control module/SCR domain  
ENSSHAP00000019606   0.000000000000306   309-380   Complement control module/SCR domain  
  0.000000000000459   377-450   Complement control module/SCR domain  
ENSSHAP00000019887   0.000000000181   2-64   Complement control module/SCR domain  
ENSSHAP00000019952   0.0000000414   34-93   Complement control module/SCR domain  
ENSSHAP00000021940   1.7e-17   95-167   Complement control module/SCR domain  
  2.97e-16   156-219   Complement control module/SCR domain  
  0.0000000000000104   218-283   Complement control module/SCR domain  
  0.00000000000148   462-519   Complement control module/SCR domain  
  0.00000000000334   406-466   Complement control module/SCR domain  
  0.00000000008   32-105   Complement control module/SCR domain  
  0.00000000249   282-344   Complement control module/SCR domain  
ENSSHAP00000022038   5.84e-17   159-231   Complement control module/SCR domain  
  0.00000000000000117   220-281   Complement control module/SCR domain  
  0.000000000000328   33-99   Complement control module/SCR domain  
  0.00000000000917   94-169   Complement control module/SCR domain  
ENSSHAP00000022039   4.17e-17   162-234   Complement control module/SCR domain  
  0.00000000000000131   223-284   Complement control module/SCR domain  
  0.000000000000236   36-102   Complement control module/SCR domain  
  0.00000000000852   97-172   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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