SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Complement control module/SCR domain superfamily domain assignments
in
Felis catus 69

Assignment details

(show help)


Felis catus 69 has 175 significant domains in 42 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSFCAP00000000045   0.0000000000000236   375-445   Complement control module/SCR domain  
  0.00000000000115   309-378   Complement control module/SCR domain  
ENSFCAP00000000160   0.00000000000005   359-429   Complement control module/SCR domain  
  0.00000000000931   300-362   Complement control module/SCR domain  
ENSFCAP00000000164   0.00000379   184-231   Complement control module/SCR domain  
ENSFCAP00000002219   2.83e-18   3030-3101   Complement control module/SCR domain  
  1.75e-17   3090-3159   Complement control module/SCR domain  
  0.00000000000000361   319-391   Complement control module/SCR domain  
  0.00000000000000553   2731-2788   Complement control module/SCR domain  
  0.0000000000000256   115-176   Complement control module/SCR domain  
  0.0000000000000297   1885-1947   Complement control module/SCR domain  
  0.00000000000012   3210-3267   Complement control module/SCR domain  
  0.000000000000216   1186-1249   Complement control module/SCR domain  
  0.000000000000292   3142-3204   Complement control module/SCR domain  
  0.000000000000556   497-559   Complement control module/SCR domain  
  0.00000000000089   1534-1601   Complement control module/SCR domain  
  0.000000000005   668-736   Complement control module/SCR domain  
  0.0000000000103   1016-1078   Complement control module/SCR domain  
  0.0000000000445   2401-2462   Complement control module/SCR domain  
  0.000000000625   2228-2291   Complement control module/SCR domain  
  0.000000000862   1711-1774   Complement control module/SCR domain  
ENSFCAP00000003048   0.0000000000000195   262-321   Complement control module/SCR domain  
  0.00000000000138   115-177   Complement control module/SCR domain  
  0.00000000473   77-125   Complement control module/SCR domain  
ENSFCAP00000004170   0.000000000000709   149-205   Complement control module/SCR domain  
  0.0000361   23-72   Complement control module/SCR domain  
ENSFCAP00000004171   0.0000000000000514   164-220   Complement control module/SCR domain  
  0.000000000000433   98-159   Complement control module/SCR domain  
  0.00000598   44-84   Complement control module/SCR domain  
ENSFCAP00000004435   5e-19   1881-1950   Complement control module/SCR domain  
  1.15e-18   2502-2571   Complement control module/SCR domain  
  1.28e-18   1698-1766   Complement control module/SCR domain  
  2.5e-18   2560-2629   Complement control module/SCR domain  
  1.53e-17   2968-3037   Complement control module/SCR domain  
  2.08e-17   2618-2687   Complement control module/SCR domain  
  1.26e-16   1584-1646   Complement control module/SCR domain  
  4.03e-16   2283-2350   Complement control module/SCR domain  
  5.28e-16   2444-2506   Complement control module/SCR domain  
  6.12e-16   2792-2859   Complement control module/SCR domain  
  9.03e-16   2167-2236   Complement control module/SCR domain  
  0.00000000000000153   2001-2065   Complement control module/SCR domain  
  0.00000000000000292   2402-2455   Complement control module/SCR domain  
  0.00000000000000389   2677-2739   Complement control module/SCR domain  
  0.00000000000000667   3027-3093   Complement control module/SCR domain  
  0.00000000000000723   2226-2288   Complement control module/SCR domain  
  0.00000000000000973   3145-3204   Complement control module/SCR domain  
  0.000000000000011   1640-1703   Complement control module/SCR domain  
  0.0000000000000167   174-241   Complement control module/SCR domain  
  0.000000000000417   1542-1593   Complement control module/SCR domain  
  0.00000000000181   2850-2916   Complement control module/SCR domain  
  0.00000000000264   1755-1823   Complement control module/SCR domain  
  0.00000000000292   2736-2801   Complement control module/SCR domain  
  0.0000000000057   2059-2127   Complement control module/SCR domain  
  0.0000000000111   1935-1993   Complement control module/SCR domain  
  0.000000000057   3086-3154   Complement control module/SCR domain  
  0.0000000000778   1820-1888   Complement control module/SCR domain  
  0.000000000417   131-184   Complement control module/SCR domain  
  0.0000000032   2909-2960   Complement control module/SCR domain  
  0.00000005   2116-2172   Complement control module/SCR domain  
  0.00000584   233-296   Complement control module/SCR domain  
  0.00107   464-524   Complement control module/SCR domain  
ENSFCAP00000004646   1.57e-17   431-496   Complement control module/SCR domain  
  0.0000000000000144   184-246   Complement control module/SCR domain  
  0.0000000000000446   311-367   Complement control module/SCR domain  
  0.00000000000324   251-305   Complement control module/SCR domain  
  0.0000000175   132-192   Complement control module/SCR domain  
  0.00000406   2-65   Complement control module/SCR domain  
ENSFCAP00000005380   0.0000000000863   124-184   Complement control module/SCR domain  
  0.00000000142   23-83   Complement control module/SCR domain  
ENSFCAP00000005473   0.000000000000103   297-367   Complement control module/SCR domain  
ENSFCAP00000006015   0.0000000000723   1513-1587   Complement control module/SCR domain  
  0.0000334   1458-1519   Complement control module/SCR domain  
  0.00401   1579-1613   Complement control module/SCR domain  
  0.00659   1390-1456   Complement control module/SCR domain  
ENSFCAP00000006092   0.000000000032   811-869   Complement control module/SCR domain  
ENSFCAP00000006225   0.00000000106   142-201   Complement control module/SCR domain  
ENSFCAP00000006535   0.0000000000000025   684-749   Complement control module/SCR domain  
  0.000000000000945   743-805   Complement control module/SCR domain  
  0.000000000021   810-869   Complement control module/SCR domain  
  0.0000000000375   330-393   Complement control module/SCR domain  
  0.000000000128   506-570   Complement control module/SCR domain  
ENSFCAP00000006823   0.000000000000082   130-189   Complement control module/SCR domain  
  0.0000000000904   194-254   Complement control module/SCR domain  
  0.000000000598   6-67   Complement control module/SCR domain  
  0.0000000181   67-128   Complement control module/SCR domain  
ENSFCAP00000007295   8.9e-16   205-266   Complement control module/SCR domain  
  0.0000000000000786   35-103   Complement control module/SCR domain  
  0.000000000097   97-160   Complement control module/SCR domain  
  0.027   166-195   Complement control module/SCR domain  
ENSFCAP00000007495   2.78e-16   54-123   Complement control module/SCR domain  
ENSFCAP00000007548   0.00000000000000264   315-381   Complement control module/SCR domain  
  0.00000000000000876   260-326   Complement control module/SCR domain  
  0.000000000000222   376-442   Complement control module/SCR domain  
  0.00000000000032   701-760   Complement control module/SCR domain  
  0.00000000000125   508-567   Complement control module/SCR domain  
  0.000000236   637-688   Complement control module/SCR domain  
ENSFCAP00000007549   0.0000000000000264   264-330   Complement control module/SCR domain  
  0.00000000000612   209-273   Complement control module/SCR domain  
ENSFCAP00000007550   0.00000000000000167   230-295   Complement control module/SCR domain  
  0.0000000000000181   348-415   Complement control module/SCR domain  
  0.00000000000005   291-364   Complement control module/SCR domain  
  0.00000000000306   413-474   Complement control module/SCR domain  
  0.0000197   164-205   Complement control module/SCR domain  
ENSFCAP00000008199   0.000000000499   25-86   Complement control module/SCR domain  
ENSFCAP00000008349   0.000000000000236   1-66   Complement control module/SCR domain  
ENSFCAP00000008365   1.83e-18   186-246   Complement control module/SCR domain  
  0.0000000000000367   128-187   Complement control module/SCR domain  
  0.000000025   64-121   Complement control module/SCR domain  
  0.000000773   2-66   Complement control module/SCR domain  
ENSFCAP00000008535   0.0000000000876   3261-3319   Complement control module/SCR domain  
ENSFCAP00000008727   3.75e-16   725-781   Complement control module/SCR domain  
ENSFCAP00000009068   0.000000000000417   1214-1274   Complement control module/SCR domain  
ENSFCAP00000009700   0.0000000000057   461-522   Complement control module/SCR domain  
ENSFCAP00000009833   4.17e-18   527-596   Complement control module/SCR domain  
  5.14e-16   779-841   Complement control module/SCR domain  
  6.53e-16   913-979   Complement control module/SCR domain  
  6.68e-16   155-225   Complement control module/SCR domain  
  0.00000000000000375   602-672   Complement control module/SCR domain  
  0.00000000000000764   663-726   Complement control module/SCR domain  
  0.00000000000000987   411-474   Complement control module/SCR domain  
  0.0000000000000195   275-345   Complement control module/SCR domain  
  0.0000000000000709   351-421   Complement control module/SCR domain  
  0.000000000000167   967-1031   Complement control module/SCR domain  
  0.000000000000959   21-83   Complement control module/SCR domain  
  0.00000000000107   848-908   Complement control module/SCR domain  
  0.00000000000264   90-148   Complement control module/SCR domain  
  0.0000000347   743-790   Complement control module/SCR domain  
  0.0000125   493-538   Complement control module/SCR domain  
  0.0266   215-247   Complement control module/SCR domain  
ENSFCAP00000009948   0.0000000000000135   704-769   Complement control module/SCR domain  
  0.000000000000667   763-825   Complement control module/SCR domain  
  0.000000000000904   831-890   Complement control module/SCR domain  
  0.0000000000138   351-412   Complement control module/SCR domain  
  0.00000000117   526-589   Complement control module/SCR domain  
ENSFCAP00000010104   0.0000000000000139   81-143   Complement control module/SCR domain  
  0.0000000000000222   228-286   Complement control module/SCR domain  
  0.00000000057   44-96   Complement control module/SCR domain  
ENSFCAP00000010129   0.00000097   472-530   Complement control module/SCR domain  
  0.000625   407-446   Complement control module/SCR domain  
ENSFCAP00000010666   0.00000425   1075-1148   Complement control module/SCR domain  
  0.000306   1270-1304   Complement control module/SCR domain  
  0.0705   1140-1180   Complement control module/SCR domain  
ENSFCAP00000011672   1.62e-21   264-345   Complement control module/SCR domain  
  0.000000000000328   83-139   Complement control module/SCR domain  
  0.000000000000403   205-265   Complement control module/SCR domain  
  0.00000000000834   160-214   Complement control module/SCR domain  
  0.0000000000113   22-93   Complement control module/SCR domain  
ENSFCAP00000012834   0.0000000000000222   80-142   Complement control module/SCR domain  
  0.0000000000959   46-87   Complement control module/SCR domain  
ENSFCAP00000012835   7.39e-17   112-184   Complement control module/SCR domain  
  0.0000000000000351   427-490   Complement control module/SCR domain  
  0.00000000000389   485-543   Complement control module/SCR domain  
  0.000000000485   318-371   Complement control module/SCR domain  
  0.00000000264   170-220   Complement control module/SCR domain  
  0.0038   362-414   Complement control module/SCR domain  
ENSFCAP00000013134   0.000000000000144   616-674   Complement control module/SCR domain  
  0.000000000000153   676-737   Complement control module/SCR domain  
  0.00000000000288   744-810   Complement control module/SCR domain  
  0.0000000485   437-502   Complement control module/SCR domain  
ENSFCAP00000013782   0.00000153   701-753   Complement control module/SCR domain  
ENSFCAP00000014043   0.000000000057   1-62   Complement control module/SCR domain  
ENSFCAP00000014412   1.32e-18   2516-2587   Complement control module/SCR domain  
  5.56e-18   2400-2468   Complement control module/SCR domain  
  3.06e-16   2634-2691   Complement control module/SCR domain  
  4.59e-16   2457-2527   Complement control module/SCR domain  
  0.00000000000000229   2576-2645   Complement control module/SCR domain  
  0.00000000000000283   2696-2764   Complement control module/SCR domain  
  0.00000000000000472   874-938   Complement control module/SCR domain  
  0.0000000000000256   1047-1111   Complement control module/SCR domain  
  0.0000000000000375   11-66   Complement control module/SCR domain  
  0.0000000000000389   699-770   Complement control module/SCR domain  
  0.0000000000000917   1223-1286   Complement control module/SCR domain  
  0.000000000000153   2097-2158   Complement control module/SCR domain  
  0.00000000000025   356-416   Complement control module/SCR domain  
  0.000000000000375   1397-1461   Complement control module/SCR domain  
  0.0000000000195   2290-2337   Complement control module/SCR domain  
  0.0000000000528   2048-2113   Complement control module/SCR domain  
  0.0000000000612   2751-2812   Complement control module/SCR domain  
  0.000000000153   1913-1974   Complement control module/SCR domain  
  0.00000195   1762-1804   Complement control module/SCR domain  
ENSFCAP00000015690   0.0000000000000038   475-536   Complement control module/SCR domain  
  0.000000000027   355-410   Complement control module/SCR domain  
  0.00000709   44-107   Complement control module/SCR domain  
  0.000445   167-218   Complement control module/SCR domain  
ENSFCAP00000016287   0.0000000000000162   5-65   Complement control module/SCR domain  
 
Weak hits:
ENSFCAP00000000162   0.00494   306-348   Complement control module/SCR domain  
ENSFCAP00000002649   0.000301   738-791   Complement control module/SCR domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Complement control module/SCR domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]