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  Home > Genomes > Pongo abelii 76_2 > Complement control module/SCR domain domains


Complement control module/SCR domain superfamily domain assignments
in
Pongo abelii 76_2

Assignment details

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Pongo abelii 76_2 has 317 significant domains in 56 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000000193   0.0000000000000459   179-251   Complement control module/SCR domain  
  0.000000000406   241-296   Complement control module/SCR domain  
  0.000000000917   55-111   Complement control module/SCR domain  
  0.00000000987   116-177   Complement control module/SCR domain  
ENSPPYP00000000275   1.39e-16   212-285   Complement control module/SCR domain  
  6.39e-16   337-401   Complement control module/SCR domain  
  0.000000000000973   269-339   Complement control module/SCR domain  
  0.0000000275   149-203   Complement control module/SCR domain  
ENSPPYP00000000278   1.17e-18   103-175   Complement control module/SCR domain  
  9.73e-18   164-232   Complement control module/SCR domain  
  2.7e-16   297-359   Complement control module/SCR domain  
  0.000000000000157   239-302   Complement control module/SCR domain  
  0.00000000000104   363-430   Complement control module/SCR domain  
  0.0000000000297   43-109   Complement control module/SCR domain  
  0.000566   420-451   Complement control module/SCR domain  
ENSPPYP00000000279   2.36e-19   1315-1387   Complement control module/SCR domain  
  4.17e-18   546-614   Complement control module/SCR domain  
  4.45e-18   923-991   Complement control module/SCR domain  
  5.53e-18   108-180   Complement control module/SCR domain  
  8.36e-18   485-557   Complement control module/SCR domain  
  4.17e-17   862-934   Complement control module/SCR domain  
  7.37e-17   169-237   Complement control module/SCR domain  
  0.00000000000000126   1376-1444   Complement control module/SCR domain  
  0.00000000000000499   1707-1771   Complement control module/SCR domain  
  0.00000000000000634   1509-1571   Complement control module/SCR domain  
  0.0000000000000101   1056-1118   Complement control module/SCR domain  
  0.0000000000000107   1178-1247   Complement control module/SCR domain  
  0.0000000000000153   1631-1700   Complement control module/SCR domain  
  0.0000000000000737   301-366   Complement control module/SCR domain  
  0.0000000000000778   1450-1514   Complement control module/SCR domain  
  0.000000000000128   679-742   Complement control module/SCR domain  
  0.000000000000306   244-307   Complement control module/SCR domain  
  0.000000000000514   1763-1825   Complement control module/SCR domain  
  0.000000000000625   998-1060   Complement control module/SCR domain  
  0.000000000000792   1122-1189   Complement control module/SCR domain  
  0.00000000000082   621-684   Complement control module/SCR domain  
  0.00000000000389   1575-1642   Complement control module/SCR domain  
  0.0000000000862   358-425   Complement control module/SCR domain  
  0.0000000000903   735-802   Complement control module/SCR domain  
  0.000000000133   48-114   Complement control module/SCR domain  
  0.000000000378   425-491   Complement control module/SCR domain  
  0.000000000391   801-872   Complement control module/SCR domain  
  0.00000000364   1255-1321   Complement control module/SCR domain  
ENSPPYP00000000280   6.12e-19   525-594   Complement control module/SCR domain  
  1.39e-16   274-343   Complement control module/SCR domain  
  2.78e-16   776-838   Complement control module/SCR domain  
  5.98e-16   153-224   Complement control module/SCR domain  
  9.87e-16   349-419   Complement control module/SCR domain  
  0.0000000000000011   910-974   Complement control module/SCR domain  
  0.00000000000000132   409-472   Complement control module/SCR domain  
  0.0000000000000025   661-723   Complement control module/SCR domain  
  0.0000000000000195   600-670   Complement control module/SCR domain  
  0.000000000000128   21-83   Complement control module/SCR domain  
  0.000000000000542   964-1028   Complement control module/SCR domain  
  0.00000000000128   88-149   Complement control module/SCR domain  
  0.00000000000208   845-904   Complement control module/SCR domain  
  0.00000000000653   214-285   Complement control module/SCR domain  
  0.0000000306   739-787   Complement control module/SCR domain  
  0.00000264   490-536   Complement control module/SCR domain  
ENSPPYP00000000283   8.48e-19   162-234   Complement control module/SCR domain  
  1.7e-16   223-284   Complement control module/SCR domain  
  0.00000000000341   98-172   Complement control module/SCR domain  
  0.0000000000917   36-102   Complement control module/SCR domain  
ENSPPYP00000000285   7.6e-17   112-184   Complement control module/SCR domain  
  7.51e-16   173-236   Complement control module/SCR domain  
  0.0000000000000524   234-296   Complement control module/SCR domain  
  0.000000000000113   443-505   Complement control module/SCR domain  
  0.00000000000526   500-558   Complement control module/SCR domain  
  0.000000000097   49-116   Complement control module/SCR domain  
  0.000000000668   316-385   Complement control module/SCR domain  
  0.00000148   377-439   Complement control module/SCR domain  
ENSPPYP00000000286   2.02e-16   131-193   Complement control module/SCR domain  
  0.0000000000000709   80-142   Complement control module/SCR domain  
  0.0000000000973   22-87   Complement control module/SCR domain  
ENSPPYP00000000442   1.31e-22   206-268   Complement control module/SCR domain  
  0.00000000000000625   149-208   Complement control module/SCR domain  
  0.00000000403   85-142   Complement control module/SCR domain  
  0.00000181   23-87   Complement control module/SCR domain  
ENSPPYP00000000443   1.18e-17   515-577   Complement control module/SCR domain  
  0.000000000000433   211-275   Complement control module/SCR domain  
  0.00000000000101   457-512   Complement control module/SCR domain  
  0.00000000117   95-152   Complement control module/SCR domain  
  0.00000000119   342-399   Complement control module/SCR domain  
  0.00000013   395-452   Complement control module/SCR domain  
  0.000000634   147-205   Complement control module/SCR domain  
  0.000136   23-88   Complement control module/SCR domain  
  0.000236   271-335   Complement control module/SCR domain  
ENSPPYP00000000444   2.1e-20   1167-1230   Complement control module/SCR domain  
  0.0000000000000262   144-216   Complement control module/SCR domain  
  0.000000000000418   867-927   Complement control module/SCR domain  
  0.000000000000553   1109-1168   Complement control module/SCR domain  
  0.00000000000162   1041-1103   Complement control module/SCR domain  
  0.00000000000288   629-686   Complement control module/SCR domain  
  0.00000000000337   85-146   Complement control module/SCR domain  
  0.00000000000378   689-744   Complement control module/SCR domain  
  0.00000000000567   924-985   Complement control module/SCR domain  
  0.000000000059   982-1043   Complement control module/SCR domain  
  0.000000000642   809-864   Complement control module/SCR domain  
  0.000000000944   561-624   Complement control module/SCR domain  
  0.00000000354   205-267   Complement control module/SCR domain  
  0.00000000498   508-572   Complement control module/SCR domain  
  0.00000000616   454-512   Complement control module/SCR domain  
  0.00000000616   262-325   Complement control module/SCR domain  
  0.000000017   390-450   Complement control module/SCR domain  
  0.0000000629   28-89   Complement control module/SCR domain  
  0.0000848   324-384   Complement control module/SCR domain  
  0.00783   751-803   Complement control module/SCR domain  
ENSPPYP00000000552   0.000000000153   1524-1598   Complement control module/SCR domain  
  0.00000639   1590-1647   Complement control module/SCR domain  
  0.0000195   1469-1530   Complement control module/SCR domain  
  0.00393   1417-1467   Complement control module/SCR domain  
ENSPPYP00000000612   0.00000000000000403   242-307   Complement control module/SCR domain  
  0.0000000000000103   302-376   Complement control module/SCR domain  
  0.0000000000000292   366-439   Complement control module/SCR domain  
  0.000000000000403   180-245   Complement control module/SCR domain  
  0.00000000000639   482-546   Complement control module/SCR domain  
  0.0000000000681   423-482   Complement control module/SCR domain  
ENSPPYP00000000614   0.0000000000000167   265-331   Complement control module/SCR domain  
  0.00000000000122   210-275   Complement control module/SCR domain  
ENSPPYP00000000616   4.31e-16   261-327   Complement control module/SCR domain  
  6.48e-16   316-382   Complement control module/SCR domain  
  0.00000000000000175   564-629   Complement control module/SCR domain  
  0.00000000000000292   502-568   Complement control module/SCR domain  
  0.00000000000000389   440-506   Complement control module/SCR domain  
  0.00000000000000598   199-266   Complement control module/SCR domain  
  0.0000000000000208   377-444   Complement control module/SCR domain  
  0.000000000000264   641-704   Complement control module/SCR domain  
  0.00000000000131   696-761   Complement control module/SCR domain  
ENSPPYP00000000820   0.00000000032   938-997   Complement control module/SCR domain  
ENSPPYP00000001812   1.53e-18   2668-2736   Complement control module/SCR domain  
  5.53e-18   3085-3153   Complement control module/SCR domain  
  1.32e-17   2908-2975   Complement control module/SCR domain  
  7.69e-17   2725-2792   Complement control module/SCR domain  
  1.35e-16   3024-3090   Complement control module/SCR domain  
  5.94e-16   3204-3272   Complement control module/SCR domain  
  7.78e-16   2965-3035   Complement control module/SCR domain  
  0.0000000000000011   312-384   Complement control module/SCR domain  
  0.0000000000000112   2051-2119   Complement control module/SCR domain  
  0.0000000000000118   2395-2468   Complement control module/SCR domain  
  0.0000000000000125   2458-2525   Complement control module/SCR domain  
  0.0000000000000229   178-239   Complement control module/SCR domain  
  0.0000000000000405   1878-1940   Complement control module/SCR domain  
  0.0000000000000792   2584-2643   Complement control module/SCR domain  
  0.0000000000000862   2785-2852   Complement control module/SCR domain  
  0.0000000000000987   2841-2901   Complement control module/SCR domain  
  0.000000000000195   1354-1417   Complement control module/SCR domain  
  0.000000000000222   3136-3198   Complement control module/SCR domain  
  0.000000000000229   1179-1242   Complement control module/SCR domain  
  0.000000000000236   836-896   Complement control module/SCR domain  
  0.000000000000405   1527-1594   Complement control module/SCR domain  
  0.000000000000681   490-552   Complement control module/SCR domain  
  0.00000000000297   2221-2285   Complement control module/SCR domain  
  0.00000000000445   1704-1767   Complement control module/SCR domain  
  0.00000000000723   661-726   Complement control module/SCR domain  
  0.00000000000792   3263-3322   Complement control module/SCR domain  
  0.0000000000103   1009-1071   Complement control module/SCR domain  
  0.0000000000334   2529-2591   Complement control module/SCR domain  
ENSPPYP00000002193   0.000000000000032   295-364   Complement control module/SCR domain  
  0.0000000000000598   361-431   Complement control module/SCR domain  
ENSPPYP00000002389   0.00000000000053   31-95   Complement control module/SCR domain  
ENSPPYP00000002390   0.0000000000162   124-185   Complement control module/SCR domain  
  0.000000000737   23-82   Complement control module/SCR domain  
ENSPPYP00000003852   0.000000000000973   297-366   Complement control module/SCR domain  
ENSPPYP00000004806   0.0000000000000653   359-429   Complement control module/SCR domain  
  0.00000000000931   298-362   Complement control module/SCR domain  
ENSPPYP00000004809   0.000000000000556   308-379   Complement control module/SCR domain  
  0.0000135   376-449   Complement control module/SCR domain  
ENSPPYP00000006760   0.000000000297   41-102   Complement control module/SCR domain  
ENSPPYP00000007666   0.00000000000584   2198-2258   Complement control module/SCR domain  
ENSPPYP00000008200   0.00000000000000737   215-277   Complement control module/SCR domain  
  0.000000000000131   569-627   Complement control module/SCR domain  
  0.000000000000208   629-690   Complement control module/SCR domain  
  0.00000000000393   697-755   Complement control module/SCR domain  
  0.0000000459   390-455   Complement control module/SCR domain  
ENSPPYP00000008491   0.000000000659   47-109   Complement control module/SCR domain  
ENSPPYP00000009125   0.00000000000000236   661-726   Complement control module/SCR domain  
  0.000000000000537   720-782   Complement control module/SCR domain  
  0.000000000021   787-847   Complement control module/SCR domain  
  0.0000000000222   307-370   Complement control module/SCR domain  
  0.000000000292   483-546   Complement control module/SCR domain  
ENSPPYP00000009611   7.78e-21   239-320   Complement control module/SCR domain  
  0.0000000000000229   83-139   Complement control module/SCR domain  
  0.0000000000000553   180-242   Complement control module/SCR domain  
  0.0000000000809   22-93   Complement control module/SCR domain  
  0.00000000653   141-189   Complement control module/SCR domain  
ENSPPYP00000013009   0.00000000000000783   744-803   Complement control module/SCR domain  
  0.0000000000264   392-453   Complement control module/SCR domain  
  0.000000000806   567-631   Complement control module/SCR domain  
ENSPPYP00000013427   3.64e-17   721-778   Complement control module/SCR domain  
ENSPPYP00000013561   2.08e-16   79-148   Complement control module/SCR domain  
ENSPPYP00000014164   0.00000000208   741-796   Complement control module/SCR domain  
ENSPPYP00000014930   0.00000000000709   571-640   Complement control module/SCR domain  
ENSPPYP00000015700   0.000000032   278-336   Complement control module/SCR domain  
ENSPPYP00000016096   0.0000000000000103   300-370   Complement control module/SCR domain  
ENSPPYP00000017232   0.00000000000473   571-634   Complement control module/SCR domain  
  0.0000000278   626-682   Complement control module/SCR domain  
ENSPPYP00000017235   0.0000000000809   644-707   Complement control module/SCR domain  
  0.0000000607   699-754   Complement control module/SCR domain  
ENSPPYP00000017455   0.000000000125   3293-3351   Complement control module/SCR domain  
ENSPPYP00000018322   0.00000000121   73-129   Complement control module/SCR domain  
  0.0000025   26-73   Complement control module/SCR domain  
ENSPPYP00000018414   0.0000000000000737   84-144   Complement control module/SCR domain  
  0.00000000000181   150-206   Complement control module/SCR domain  
  0.00000528   24-92   Complement control module/SCR domain  
ENSPPYP00000018417   0.0000000000000306   97-158   Complement control module/SCR domain  
  0.000000000000639   164-220   Complement control module/SCR domain  
  0.00000542   44-84   Complement control module/SCR domain  
ENSPPYP00000020508   1.75e-19   1812-1880   Complement control module/SCR domain  
  8.62e-19   1869-1938   Complement control module/SCR domain  
  1.38e-18   2052-2120   Complement control module/SCR domain  
  3.1e-17   2168-2233   Complement control module/SCR domain  
  5.8e-17   2228-2297   Complement control module/SCR domain  
  7.09e-17   1927-2000   Complement control module/SCR domain  
  2.08e-16   2109-2179   Complement control module/SCR domain  
  5.14e-16   2286-2357   Complement control module/SCR domain  
  0.00000000000000175   814-878   Complement control module/SCR domain  
  0.000000000000005   1626-1693   Complement control module/SCR domain  
  0.0000000000000195   123-191   Complement control module/SCR domain  
  0.0000000000000208   639-709   Complement control module/SCR domain  
  0.0000000000000283   1564-1637   Complement control module/SCR domain  
  0.0000000000000486   1754-1816   Complement control module/SCR domain  
  0.000000000000089   1984-2046   Complement control module/SCR domain  
  0.000000000000139   988-1052   Complement control module/SCR domain  
  0.000000000000181   298-358   Complement control module/SCR domain  
  0.000000000000417   1368-1425   Complement control module/SCR domain  
  0.0000000000012   1196-1260   Complement control module/SCR domain  
  0.0000000000459   2369-2427   Complement control module/SCR domain  
  0.000000000361   1709-1764   Complement control module/SCR domain  
  0.00000000111   480-529   Complement control module/SCR domain  
  0.000000153   1426-1468   Complement control module/SCR domain  
ENSPPYP00000020510   0.0000000000000162   5-65   Complement control module/SCR domain  
ENSPPYP00000021124   4.72e-21   2930-3001   Complement control module/SCR domain  
  3.91e-19   2575-2643   Complement control module/SCR domain  
  3.91e-18   2632-2700   Complement control module/SCR domain  
  5.42e-18   2871-2941   Complement control module/SCR domain  
  6.21e-18   2691-2757   Complement control module/SCR domain  
  1.81e-17   2814-2882   Complement control module/SCR domain  
  7.83e-17   2990-3059   Complement control module/SCR domain  
  0.00000000000000153   3110-3178   Complement control module/SCR domain  
  0.00000000000000417   2746-2807   Complement control module/SCR domain  
  0.00000000000000459   3049-3105   Complement control module/SCR domain  
  0.00000000000000513   2174-2243   Complement control module/SCR domain  
  0.0000000000000167   2342-2415   Complement control module/SCR domain  
  0.0000000000000351   963-1023   Complement control module/SCR domain  
  0.0000000000000364   2002-2064   Complement control module/SCR domain  
  0.0000000000000405   1481-1545   Complement control module/SCR domain  
  0.000000000000131   617-676   Complement control module/SCR domain  
  0.000000000000195   1828-1894   Complement control module/SCR domain  
  0.000000000000297   1136-1198   Complement control module/SCR domain  
  0.000000000000486   135-196   Complement control module/SCR domain  
  0.00000000000124   1307-1369   Complement control module/SCR domain  
  0.00000000000351   788-856   Complement control module/SCR domain  
  0.00000000000403   2517-2579   Complement control module/SCR domain  
  0.00000000000556   3169-3227   Complement control module/SCR domain  
  0.00000000000848   441-510   Complement control module/SCR domain  
  0.0000000000139   2462-2524   Complement control module/SCR domain  
  0.0000000000973   1654-1716   Complement control module/SCR domain  
  0.000000000229   2404-2452   Complement control module/SCR domain  
ENSPPYP00000021723   0.000000000264   17-80   Complement control module/SCR domain  
ENSPPYP00000021836   3.34e-19   2082-2151   Complement control module/SCR domain  
  6.95e-18   2766-2835   Complement control module/SCR domain  
  9.59e-18   1783-1852   Complement control module/SCR domain  
  1.39e-17   1899-1967   Complement control module/SCR domain  
  1.53e-17   2317-2387   Complement control module/SCR domain  
  1.53e-17   2709-2777   Complement control module/SCR domain  
  2.5e-17   1725-1794   Complement control module/SCR domain  
  3.2e-17   3174-3243   Complement control module/SCR domain  
  6.67e-17   2201-2269   Complement control module/SCR domain  
  1e-16   2434-2503   Complement control module/SCR domain  
  1.33e-16   1626-1684   Complement control module/SCR domain  
  2.64e-16   2606-2661   Complement control module/SCR domain  
  3.2e-16   2492-2559   Complement control module/SCR domain  
  0.00000000000000153   2824-2893   Complement control module/SCR domain  
  0.00000000000000181   3351-3410   Complement control module/SCR domain  
  0.00000000000000181   3233-3298   Complement control module/SCR domain  
  0.00000000000000292   2651-2713   Complement control module/SCR domain  
  0.0000000000000032   2376-2445   Complement control module/SCR domain  
  0.00000000000000347   2998-3065   Complement control module/SCR domain  
  0.00000000000000556   2882-2946   Complement control module/SCR domain  
  0.0000000000000153   1842-1904   Complement control module/SCR domain  
  0.0000000000000222   372-439   Complement control module/SCR domain  
  0.0000000000000931   1569-1637   Complement control module/SCR domain  
  0.00000000000057   2260-2328   Complement control module/SCR domain  
  0.00000000000128   2941-3007   Complement control module/SCR domain  
  0.00000000000139   2136-2194   Complement control module/SCR domain  
  0.00000000000222   311-382   Complement control module/SCR domain  
  0.00000000000431   1956-2024   Complement control module/SCR domain  
  0.0000000000125   3056-3119   Complement control module/SCR domain  
  0.0000000000278   3292-3358   Complement control module/SCR domain  
  0.000000000334   2021-2088   Complement control module/SCR domain  
  0.00000000153   3116-3179   Complement control module/SCR domain  
  0.00000542   431-488   Complement control module/SCR domain  
  0.000702   662-724   Complement control module/SCR domain  
ENSPPYP00000021850   0.000000000000222   142-212   Complement control module/SCR domain  
  0.0000000000959   202-262   Complement control module/SCR domain  
ENSPPYP00000021851   0.000000000000222   142-212   Complement control module/SCR domain  
  0.0000000000973   202-262   Complement control module/SCR domain  
ENSPPYP00000021900   0.000000000306   1319-1386   Complement control module/SCR domain  
  0.00000000403   1250-1322   Complement control module/SCR domain  
  0.0000000167   1188-1258   Complement control module/SCR domain  
  0.00000208   1119-1192   Complement control module/SCR domain  
ENSPPYP00000022654   0.0000000000000195   259-317   Complement control module/SCR domain  
  0.0000000000000208   112-173   Complement control module/SCR domain  
  0.000000000667   75-127   Complement control module/SCR domain  
ENSPPYP00000022993   0.0000000000000057   116-178   Complement control module/SCR domain  
  0.0000000000000389   263-322   Complement control module/SCR domain  
  0.0000000306   78-126   Complement control module/SCR domain  
ENSPPYP00000023939   0.0000000000000594   143-213   Complement control module/SCR domain  
  0.0000000000054   82-146   Complement control module/SCR domain  
ENSPPYP00000024045   1.95e-17   389-446   Complement control module/SCR domain  
ENSPPYP00000024425   4.32e-20   453-533   Complement control module/SCR domain  
  0.0000000000000144   206-268   Complement control module/SCR domain  
  0.00000000000017   333-389   Complement control module/SCR domain  
  0.00000000000328   396-455   Complement control module/SCR domain  
  0.00000000000715   273-327   Complement control module/SCR domain  
  0.0000000000144   522-578   Complement control module/SCR domain  
  0.00000000616   154-214   Complement control module/SCR domain  
  0.0000000301   89-148   Complement control module/SCR domain  
  0.00000315   25-95   Complement control module/SCR domain  
ENSPPYP00000024456   5.95e-21   201-282   Complement control module/SCR domain  
  1.11e-17   83-151   Complement control module/SCR domain  
  0.0000000000000393   142-204   Complement control module/SCR domain  
  0.0000000000405   22-93   Complement control module/SCR domain  
 
Weak hits:
ENSPPYP00000004811   0.000481   174-219   Complement control module/SCR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   312829 312829
No Yes Homo sapiens 76_38 Human 1435 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 325 57
No Yes Gorilla gorilla 76_3.1 Western gorilla 448 88
No Yes Pongo abelii 76_2 Sumatran orangutan 317 56
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 308 50
No Yes Papio anubis 76 Olive baboon 302 59
No Yes Macaca mulatta 76_1 Rhesus monkey 637 126
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 608 130
No Yes Otolemur garnettii 76_3 Small-eared galago 278 49
No Yes Microcebus murinus 76_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 76_5.0 Norway rat 345 72
No Yes Mus musculus 76_38 House mouse 583 113
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 244 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 276 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 316 64
No Yes Oryctolagus cuniculus 76_2 Rabbit 296 54
No Yes Ochotona princeps 76 American pika 235 42
No Yes Tupaia belangeri 76 Northern tree shrew 223 41
No Yes Sus scrofa 76_10.2 Pig 330 84
No Yes Bos taurus 76_3.1 Cattle 367 70
No Yes Ovis aries 76_3.1 Sheep 384 65
No Yes Vicugna pacos 76_1 Alpaca 237 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 338 59
No Yes Ailuropoda melanoleuca 76_1 Giant panda 376 68
No Yes Canis familiaris 76_3.1 Dog 524 79
No Yes Felis catus 76_6.2 Domestic cat 293 60
No Yes Equus caballus 76_2 Horse 670 77
No Yes Myotis lucifugus 76_2.0 Little brown bat 436 79
No Yes Pteropus vampyrus 76_1 Large flying fox 266 48
No Yes Sorex araneus 76_1 European shrew 180 32
No Yes Erinaceus europaeus 76 Western European hedgehog 185 40
No Yes Procavia capensis 76_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 76_3 African savanna elephant 368 73
No Yes Echinops telfairi 76 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 398 71
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 76_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 281 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 292 53
No Yes Ornithorhynchus anatinus 76_5 Platypus 317 73
No Yes Saccoglossus kowalevskii v3.0   436 89
No Yes Petromyzon marinus 76_7.0 Sea lamprey 116 22
No Yes Meleagris gallopavo 76_2 Turkey 235 53
No Yes Gallus gallus 76_4 Chicken 257 40
No Yes Anas platyrhynchos 76_1.0 Mallard 260 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 255 50
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 243 46
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 320 56
No Yes Anolis carolinensis 76_2.0 Green anole 288 48
No Yes Xenopus laevis African clawed frog 169 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 282 60
No Yes Latimeria chalumnae 76_1 Coelacanth 210 59
No Yes Lepisosteus oculatus 76 Spotted gar 357 61
No Yes Gadus morhua 76_1 Atlantic cod 209 51
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 385 69
No Yes Takifugu rubripes 76_4 Torafugu 1131 209
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 343 72
No Yes Oryzias latipes 76_1 Japanese medaka 280 61
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 267 52
No Yes Poecilia formosa 76 Amazon molly 273 52
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 372 77
No Yes Astyanax mexicanus 76 Mexican tetra 274 73
No Yes Danio rerio 76_9 Zebrafish 514 124
No Yes Oikopleura dioica   95 41
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 702 114
No Yes Ciona intestinalis 76 Vase tunicate 377 94
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 760 248
No Yes Adineta vaga   31 10
No Yes Octopus bimaculoides 280   214 50
No Yes Crassostrea gigas 22 Pacific oyster 252 106
No Yes Lottia gigantea Owl limpet 351 126
No Yes Helobdella robusta   57 11
No Yes Capitella sp. I   352 80
No Yes Danaus plexippus OGS1.0 Monarch butterfly 39 12
No Yes Heliconius melpomene Postman butterfly 40 12
No Yes Bombyx mori Domestic silkworm 35 11
No Yes Nasonia vitripennis Jewel wasp 42 10
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 69 16
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 60 19
No Yes Linepithema humile v1.1 Argentine ant 60 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 51 14
No Yes Solenopsis invicta v.2.2.3 Red fire ant 37 12
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 54 13
No Yes Atta cephalotes v1.1   55 15
No Yes Camponotus floridanus v3.3 Florida carpenter ant 53 13
No Yes Lucilia cuprina Australian sheep blowfly 44 9
No Yes Drosophila grimshawi 1.3   55 14
No Yes Drosophila willistoni 1.3   49 12
No Yes Drosophila pseudoobscura 2.13   53 15
No Yes Drosophila persimilis 1.3   46 13
No Yes Drosophila suzukii   53 14
No Yes Drosophila yakuba 1.3   56 17
No Yes Drosophila simulans 1.3   45 15
No Yes Drosophila sechellia 1.3   51 16
No Yes Drosophila melanogaster 76_5 Fruit fly 185 41
No Yes Drosophila erecta 1.3   56 17
No Yes Drosophila ananassae 1.3   48 11
No Yes Drosophila virilis 1.2   50 11
No Yes Drosophila mojavensis 1.3   47 11
No Yes Megaselia scalaris 22   19 9
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 56 18
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 16
No Yes Anopheles darlingi 22 American malaria mosquito 28 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 51 14
No Yes Tribolium castaneum 3.0 Red flour beetle 75 17
No Yes Pediculus humanus corporis (Early assembly) Human body louse 54 11
No Yes Acyrthosiphon pisum Pea aphid 45 10
No Yes Rhodnius prolixus 22   40 11
No Yes Daphnia pulex Common water flea 108 24
No Yes Strigamia maritima 22   123 38
No Yes Sarcoptes scabiei   48 13
No Yes Tetranychus urticae Two-spotted spider mite 87 25
No Yes Ixodes scapularis (Preliminary) Black-legged tick 90 40
No Yes Pristionchus pacificus   14 6
No Yes Meloidogyne incognita Southern root-knot nematode 73 27
No Yes Meloidogyne hapla   11 5
No Yes Onchocerca volvulus 22   50 14
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 42 18
No Yes Caenorhabditis japonica   45 13
No Yes Caenorhabditis brenneri   69 10
No Yes Caenorhabditis remanei   49 12
No Yes Caenorhabditis elegans 76_235 Roundworm 126 19
No Yes Caenorhabditis briggsae 2   45 8
No Yes Trichinella spiralis 22   28 10
No Yes Hymenolepis microstoma   11 5
No Yes Echinococcus multilocularis   8 2
No Yes Echinococcus granulosus   9 2
No Yes Taenia solium Pork tapeworm 9 3
No Yes Schistosoma mansoni   6 3
No Yes Mnemiopsis leidyi Sea walnut 262 110
No Yes Acropora digitifera v1.0   343 78
No Yes Nematostella vectensis 1.0 Starlet sea anemone 120 33
No Yes Hydra vulgaris   48 17
No Yes Amphimedon queenslandica   273 48
No Yes Trichoplax adhaerens   7 2
No Yes Proterospongia sp. ATCC 50818   102 32
No Yes Monosiga brevicollis   30 12
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   128 20
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   227 38
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Perkinsus marinus ATCC 50983   2 1
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   29 17
No Yes Guillardia theta CCMP2712 v1.0   32 13
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 359 80
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 34
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 60 15
No Yes Ascaris suum Victoria/Ghent Pig roundworm 43 11
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 53 14
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1543 346
No Yes Homo sapiens (NCBI version) Human 592 109
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 294 55
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 46 12
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 38 17
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 11
No Yes Homo sapiens 69_37 Human 414 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 322 54
No Yes Gorilla gorilla 69_3.1 Western gorilla 314 51
No Yes Pongo abelii 69_2 Sumatran orangutan 311 54
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 265 46
No Yes Macaca mulatta 69_1 Rhesus monkey 285 54
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 307 53
No Yes Otolemur garnettii 69_3 Small-eared galago 275 47
No Yes Microcebus murinus 69_1 Gray mouse lemur 206 43
No Yes Rattus norvegicus 69_3.4 Norway rat 299 55
No Yes Mus musculus 69_38 House mouse 291 58
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 212 40
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 236 47
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 290 51
No Yes Ochotona princeps 69 American pika 235 42
No Yes Tupaia belangeri 69 Northern tree shrew 223 41
No Yes Sus scrofa 69_10.2 Pig 266 54
No Yes Bos taurus 69_3.1 Cattle 301 54
No Yes Vicugna pacos 69_1 Alpaca 237 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 248 48
No Yes Mustela putorius furo 69_1.0 Domestic ferret 311 58
No Yes Ailuropoda melanoleuca 69_1 Giant panda 286 57
No Yes Canis familiaris 69_3.1 Dog 292 48
No Yes Felis catus 69 Domestic cat 175 42
No Yes Equus caballus 69_2 Horse 323 55
No Yes Myotis lucifugus 69_2.0 Little brown bat 396 71
No Yes Pteropus vampyrus 69_1 Large flying fox 266 48
No Yes Sorex araneus 69_1 European shrew 180 32
No Yes Erinaceus europaeus 69 Western European hedgehog 185 40
No Yes Procavia capensis 69_1 Cape rock hyrax 200 44
No Yes Loxodonta africana 69_3 African savanna elephant 293 55
No Yes Echinops telfairi 69 Small Madagascar hedgehog 224 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 204 43
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 188 30
No Yes Macropus eugenii 69_1.0 Tammar wallaby 189 42
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 212 45
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 279 52
No Yes Ornithorhynchus anatinus 69_5 Platypus 277 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 113 21
No Yes Meleagris gallopavo 69_2 Turkey 205 43
No Yes Gallus gallus 69_2 Chicken 252 42
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 250 47
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 269 48
No Yes Anolis carolinensis 69_2.0 Green anole 258 43
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 243 49
No Yes Latimeria chalumnae 69_1 Coelacanth 174 47
No Yes Gadus morhua 69_1 Atlantic cod 193 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 248 53
No Yes Takifugu rubripes 69_4 Torafugu 249 49
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 270 53
No Yes Oryzias latipes 69_1 Japanese medaka 257 51
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 267 52
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 312 58
No Yes Danio rerio 69_9 Zebrafish 338 71
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 360 70
No Yes Ciona intestinalis 69 Vase tunicate 368 92
No Yes Drosophila melanogaster 69_5 Fruit fly 55 15
No Yes Caenorhabditis elegans 69_215 Roundworm 49 10
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   135945 27302
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 1
No Yes Protozoadb 2010_08 (Protozoadb)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10951 2334
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   84109 19171
No Yes Global Ocean Sampling Expedition (GOS)   50 31
No Yes NCBI viral sequences (Viral)   117 36
No Yes PDB chains (SCOP 1.75) (PDB)   82 40
No Yes Protein Data Bank (all PDB sequenc)   684 262
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1247 1247
No Yes TargetDB (Targets)   314 85
No Yes UniProt viral sequences (Viral)   446 138

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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