Select to display Genome Domains Proteins No ALL 88877 88877 Yes Homo sapiens 76_38 Human 207 125 Yes Pan troglodytes 76_2.1.4 Chimpanzee 60 45 Yes Gorilla gorilla 76_3.1 Western gorilla 104 62 Yes Pongo abelii 76_2 Sumatran orangutan 68 40 Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 68 41 Yes Papio anubis 76 Olive baboon 87 47 Yes Macaca mulatta 76_1 Rhesus monkey 124 65 Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 139 77 Yes Otolemur garnettii 76_3 Small-eared galago 56 37 Yes Microcebus murinus 76_1 Gray mouse lemur 59 35 Yes Rattus norvegicus 76_5.0 Norway rat 184 76 Yes Mus musculus 76_38 House mouse 152 97 Yes Dipodomys ordii 76_1 Ord's kangaroo rat 54 29 Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 61 34 Yes Heterocephalus glaber v1.7-2 Naked mole-rat 61 35 Yes Cavia porcellus 76_3 Domestic guinea pig 73 45 Yes Oryctolagus cuniculus 76_2 Rabbit 65 44 Yes Ochotona princeps 76 American pika 52 31 Yes Tupaia belangeri 76 Northern tree shrew 36 24 Yes Sus scrofa 76_10.2 Pig 88 49 Yes Bos taurus 76_3.1 Cattle 70 41 Yes Ovis aries 76_3.1 Sheep 82 41 Yes Vicugna pacos 76_1 Alpaca 40 24 Yes Tursiops truncatus 76_1 Bottlenose dolphin 61 37 Yes Mustela putorius furo 76_1.0 Domestic ferret 69 42 Yes Ailuropoda melanoleuca 76_1 Giant panda 86 52 Yes Canis familiaris 76_3.1 Dog 97 53 Yes Felis catus 76_6.2 Domestic cat 66 37 Yes Equus caballus 76_2 Horse 77 38 Yes Myotis lucifugus 76_2.0 Little brown bat 56 35 Yes Pteropus vampyrus 76_1 Large flying fox 64 38 Yes Sorex araneus 76_1 European shrew 41 26 Yes Erinaceus europaeus 76 Western European hedgehog 46 30 Yes Procavia capensis 76_1 Cape rock hyrax 53 29 Yes Loxodonta africana 76_3 African savanna elephant 75 42 Yes Echinops telfairi 76 Small Madagascar hedgehog 50 31 Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 72 45 Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 38 23 Yes Macropus eugenii 76_1.0 Tammar wallaby 41 30 Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 81 50 Yes Monodelphis domestica 76_5 Gray short-tailed opossum 74 46 Yes Ornithorhynchus anatinus 76_5 Platypus 54 36 Yes Saccoglossus kowalevskii v3.0 107 66 Yes Petromyzon marinus 76_7.0 Sea lamprey 20 16 Yes Meleagris gallopavo 76_2 Turkey 79 43 Yes Gallus gallus 76_4 Chicken 77 45 Yes Anas platyrhynchos 76_1.0 Mallard 61 39 Yes Taeniopygia guttata 76_3.2.4 Zebra finch 69 44 Yes Ficedula albicollis 76_1.0 Collared flycatcher 63 41 Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 72 48 Yes Anolis carolinensis 76_2.0 Green anole 54 44 Yes Xenopus laevis African clawed frog 56 43 Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 45 30 Yes Latimeria chalumnae 76_1 Coelacanth 51 36 Yes Lepisosteus oculatus 76 Spotted gar 68 52 Yes Gadus morhua 76_1 Atlantic cod 56 42 Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 56 46 Yes Takifugu rubripes 76_4 Torafugu 150 119 Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 66 52 Yes Oryzias latipes 76_1 Japanese medaka 52 46 Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 45 38 Yes Poecilia formosa 76 Amazon molly 55 41 Yes Oreochromis niloticus 76_1.0 Nile tilapia 69 53 Yes Astyanax mexicanus 76 Mexican tetra 62 47 Yes Danio rerio 76_9 Zebrafish 94 72 Yes Oikopleura dioica 13 7 Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 91 87 Yes Ciona intestinalis 76 Vase tunicate 41 28 Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 75 43 Yes Adineta vaga 22 14 Yes Octopus bimaculoides 280 46 32 Yes Crassostrea gigas 22 Pacific oyster 114 46 Yes Lottia gigantea Owl limpet 62 28 Yes Helobdella robusta 44 24 Yes Capitella sp. I 37 18 Yes Danaus plexippus OGS1.0 Monarch butterfly 78 30 Yes Heliconius melpomene Postman butterfly 87 24 Yes Bombyx mori Domestic silkworm 38 16 Yes Nasonia vitripennis Jewel wasp 29 18 Yes Apis mellifera 38.2d (Not maintained) Honey bee 64 53 Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 29 16 Yes Linepithema humile v1.1 Argentine ant 37 19 Yes Pogonomyrmex barbatus v1.2 Red harvester ant 33 19 Yes Solenopsis invicta v.2.2.3 Red fire ant 28 16 Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 32 15 Yes Atta cephalotes v1.1 39 23 Yes Camponotus floridanus v3.3 Florida carpenter ant 34 14 Yes Lucilia cuprina Australian sheep blowfly 57 35 Yes Drosophila grimshawi 1.3 43 30 Yes Drosophila willistoni 1.3 34 22 Yes Drosophila pseudoobscura 2.13 38 25 Yes Drosophila persimilis 1.3 38 25 Yes Drosophila suzukii 45 29 Yes Drosophila yakuba 1.3 38 25 Yes Drosophila simulans 1.3 24 18 Yes Drosophila sechellia 1.3 36 23 Yes Drosophila melanogaster 76_5 Fruit fly 60 46 Yes Drosophila erecta 1.3 38 25 Yes Drosophila ananassae 1.3 37 23 Yes Drosophila virilis 1.2 43 28 Yes Drosophila mojavensis 1.3 46 32 Yes Megaselia scalaris 22 21 11 Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 26 15 Yes Culex pipiens quinquefasciatus Southern house mosquito 37 21 Yes Anopheles darlingi 22 American malaria mosquito 15 7 Yes Anopheles gambiae 49_3j African malaria mosquito 29 18 Yes Tribolium castaneum 3.0 Red flour beetle 38 16 Yes Pediculus humanus corporis Human body louse 30 15 Yes Acyrthosiphon pisum Pea aphid 19 9 Yes Rhodnius prolixus 22 48 30 Yes Daphnia pulex Common water flea 35 12 Yes Strigamia maritima 22 58 20 Yes Sarcoptes scabiei 14 8 Yes Tetranychus urticae Two-spotted spider mite 50 13 Yes Ixodes scapularis Black-legged tick 25 16 Yes Pristionchus pacificus 10 4 Yes Meloidogyne incognita Southern root-knot nematode 4 4 Yes Meloidogyne hapla 7 3 Yes Onchocerca volvulus 22 22 5 Yes Brugia malayi WS250 Agent of lymphatic filariasis 31 8 Yes Caenorhabditis japonica 25 6 Yes Caenorhabditis brenneri 27 7 Yes Caenorhabditis remanei 29 7 Yes Caenorhabditis elegans 76_235 Roundworm 33 11 Yes Caenorhabditis briggsae 2 28 7 Yes Trichinella spiralis 22 20 12 Yes Hymenolepis microstoma 3 1 Yes Echinococcus multilocularis 11 3 Yes Echinococcus granulosus 9 2 Yes Taenia solium Pork tapeworm 10 3 Yes Schistosoma mansoni 11 3 Yes Mnemiopsis leidyi Sea walnut 28 25 Yes Acropora digitifera v1.0 74 38 Yes Nematostella vectensis 1.0 Starlet sea anemone 125 47 Yes Hydra vulgaris 78 31 Yes Amphimedon queenslandica 18 14 Yes Trichoplax adhaerens 42 24 Yes Proterospongia sp. ATCC 50818 14 8 Yes Monosiga brevicollis 3 2 Yes Sphaeroforma arctica JP610 13 5 Yes Mortierella verticillata NRRL 6337 16 7 Yes Pisolithus microcarpus 441 v1.0 1 1 Yes Microsporum canis CBS 113480 1 1 Yes Trichophyton equinum CBS 127.97 1 1 Yes Trichophyton tonsurans CBS 112818 1 1 Yes Trichophyton rubrum CBS 118892 1 1 Yes Aspergillus glaucus 4 4 Yes Glycine max v109 Soybean 1 1 Yes Linum usitatissimum v200 Flax 4 4 Yes Populus trichocarpa v156 Black cottonwood 1 1 Yes Physcomitrella patens 1 1 Yes Coccomyxa subellipsoidea sp. C-169 v2 2 1 Yes Asterochloris sp. Cgr/DA1pho v1.0 1 1 Yes Chlorella variabilis sp. NC64A 18 7 Yes Chlorella vulgaris 1 1 Yes Volvox carteri f. nagariensis 24 7 Yes Volvox carteri v199 26 8 Yes Chlamydomonas reinhardtii 4.0 27 7 Yes Ostreococcus sp. RCC809 1 1 Yes Ostreococcus lucimarinus CCE9901 2 1 Yes Ostreococcus tauri 1 1 Yes Bathycoccus prasinos 1 1 Yes Thecamonas trahens ATCC 50062 2 2 Yes Bigelowiella natans CCMP2755 22 1 1 Yes Cyanophora paradoxa 6 3 Yes Albugo laibachii 22 9 5 Yes Pythium iwayamai DAOM BR242034 22 27 10 Yes Pythium arrhenomanes ATCC 12531 22 35 12 Yes Pythium ultimum v1.7-2 39 16 Yes Pythium aphanidermatum DAOM BR444 22 44 14 Yes Pythium irregulare DAOM BR486 22 36 15 Yes Pythium vexans DAOM BR484 22 16 8 Yes Phytophthora ramorum 1.1 Sudden oak death agent 35 17 Yes Phytophthora sojae 1.1 46 28 Yes Phytophthora infestans T30-4 43 19 Yes Phytophthora capsici 43 21 Yes Hyaloperonospora arabidopsidis 22 9 6 Yes Thalassiosira pseudonana CCMP1335 7 3 Yes Tetrahymena thermophila SB210 1 1 1 Yes Ichthyophthirius multifiliis strain G5 1 1 Yes Cryptosporidium hominis 22 4 Yes Cryptosporidium muris 15 4 Yes Cryptosporidium parvum Iowa II 21 4 Yes Neospora caninum 24 5 Yes Toxoplasma gondii VEG 26 4 Yes Toxoplasma gondii ME49 32 7 Yes Toxoplasma gondii GT1 30 6 Yes Naegleria gruberi 4 3 Yes Guillardia theta CCMP2712 v1.0 1 1 Yes Emiliania huxleyi CCMP1516 1 1 Yes Belliella baltica DSM 15883 1 1 Yes Fibrella aestuarina 1 1 Yes Runella slithyformis DSM 19594 1 1 Yes Fluviicola taffensis DSM 16823 1 1 Yes Owenweeksia hongkongensis DSM 17368 1 1 Yes Aequorivita sublithincola DSM 14238 1 1 Yes Bacteriovorax marinus SJ 1 1 Yes Geobacter daltonii FRC-32 1 1 Yes Sorangium cellulosum 'So ce 56' 16 8 Yes Nitrosospira multiformis ATCC 25196 2 2 Yes Nitrosomonas europaea ATCC 19718 1 1 Yes Caulobacter sp. K31 1 1 Yes Phenylobacterium zucineum HLK1 1 1 Yes Maricaulis maris MCS10 1 1 Yes Hyphomonas neptunium ATCC 15444 1 1 Yes Ochrobactrum anthropi ATCC 49188 2 1 Yes Sinorhizobium medicae WSM419 3 1 Yes Sinorhizobium meliloti AK83 3 1 Yes Mesorhizobium sp. BNC1 3 1 Yes Mesorhizobium opportunistum WSM2075 2 1 Yes Mesorhizobium ciceri biovar biserrulae WSM1271 2 1 Yes Mesorhizobium loti MAFF303099 2 1 Yes Methylocystis sp. SC2 2 2 Yes Candidatus Nitrosopumilus sp. AR2 2 2 Yes Nitrosopumilus maritimus SCM1 3 3 Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 81 57 Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 54 41 Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 29 18 Yes Ascaris suum Victoria/Ghent Pig roundworm 24 9 Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 29 7 Yes Neospora caninum Nc-Liverpool 6.2 24 5 Yes Sorangium cellulosum So0157-2 8 4 Yes Sinorhizobium fredii USDA 257 3 1 Yes Sinorhizobium fredii HH103 3 1 Yes Sinorhizobium meliloti 2011 3 1 Yes Sinorhizobium meliloti Rm41 3 1 Yes Sinorhizobium meliloti SM11 3 1 Yes Sinorhizobium meliloti BL225C 3 1 Yes Sinorhizobium meliloti 1021 3 1 Yes Mesorhizobium australicum WSM2073 2 1 Yes Hyphomicrobium nitrativorans NL23 1 1 Yes Bradyrhizobium oligotrophicum S58 1 1 Yes Simiduia agarivorans SA1 = DSM 21679 1 1 Yes Alteromonas macleodii str. 'English Channel 673' 1 1 Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 2 2 Yes Homo sapiens 75_37 (old version GRC) Human 208 133 Yes Homo sapiens Human 132 74 Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 84 55 Yes Heliconius numata 19 10 Yes Loa loa v3.3 (Request) Eye worm 20 7 Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 9 4 Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 7 5 Yes Ricinus communis Castor bean 1 1 Yes Homo sapiens 69_37 Human 81 51 Yes Pan troglodytes 69_2.1.4 Chimpanzee 58 43 Yes Gorilla gorilla 69_3.1 Western gorilla 76 49 Yes Pongo abelii 69_2 Sumatran orangutan 67 39 Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 68 41 Yes Macaca mulatta 69_1 Rhesus monkey 73 45 Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 68 42 Yes Otolemur garnettii 69_3 Small-eared galago 56 37 Yes Microcebus murinus 69_1 Gray mouse lemur 59 35 Yes Rattus norvegicus 69_3.4 Norway rat 79 50 Yes Mus musculus 69_38 House mouse 85 56 Yes Dipodomys ordii 69_1 Ord's kangaroo rat 54 29 Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 60 33 Yes Cavia porcellus 69_3 Domestic guinea pig 71 43 Yes Oryctolagus cuniculus 69_2 Rabbit 57 37 Yes Ochotona princeps 69 American pika 52 31 Yes Tupaia belangeri 69 Northern tree shrew 36 24 Yes Sus scrofa 69_10.2 Pig 79 45 Yes Bos taurus 69_3.1 Cattle 69 40 Yes Vicugna pacos 69_1 Alpaca 40 24 Yes Tursiops truncatus 69_1 Bottlenose dolphin 61 37 Yes Mustela putorius furo 69_1.0 Domestic ferret 69 42 Yes Ailuropoda melanoleuca 69_1 Giant panda 81 47 Yes Canis familiaris 69_3.1 Dog 74 44 Yes Felis catus 69 Domestic cat 50 28 Yes Equus caballus 69_2 Horse 48 31 Yes Myotis lucifugus 69_2.0 Little brown bat 55 34 Yes Pteropus vampyrus 69_1 Large flying fox 64 38 Yes Sorex araneus 69_1 European shrew 41 26 Yes Erinaceus europaeus 69 Western European hedgehog 46 30 Yes Procavia capensis 69_1 Cape rock hyrax 53 29 Yes Loxodonta africana 69_3 African savanna elephant 59 35 Yes Echinops telfairi 69 Small Madagascar hedgehog 50 31 Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 43 30 Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 38 23 Yes Macropus eugenii 69_1.0 Tammar wallaby 41 30 Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 59 38 Yes Monodelphis domestica 69_5 Gray short-tailed opossum 72 44 Yes Ornithorhynchus anatinus 69_5 Platypus 49 31 Yes Petromyzon marinus 69_7.0 Sea lamprey 19 15 Yes Meleagris gallopavo 69_2 Turkey 55 35 Yes Gallus gallus 69_2 Chicken 68 39 Yes Taeniopygia guttata 69_3.2.4 Zebra finch 64 41 Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 61 39 Yes Anolis carolinensis 69_2.0 Green anole 44 37 Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 39 26 Yes Latimeria chalumnae 69_1 Coelacanth 45 32 Yes Gadus morhua 69_1 Atlantic cod 49 35 Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 48 38 Yes Takifugu rubripes 69_4 Torafugu 49 34 Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 52 38 Yes Oryzias latipes 69_1 Japanese medaka 37 32 Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 45 38 Yes Oreochromis niloticus 69_1.0 Nile tilapia 55 40 Yes Danio rerio 69_9 Zebrafish 64 49 Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 32 30 Yes Ciona intestinalis 69 Vase tunicate 32 25 Yes Drosophila melanogaster 69_5 Fruit fly 41 28 Yes Caenorhabditis elegans 69_215 Roundworm 29 7 Yes 4_050719Q (meta-genome) 1 1 Yes Combined (meta-genome) 2 2 Yes Dump bottom (Dump bottom) (meta-genome) 4 2 Yes Dump top (Dump top) (meta-genome) 5 4 Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 3 2 Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1 Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 1 1 Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 1 1 Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 1 1 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 3 2 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 1 1 Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 1 1 Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 3 3 Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 1 1 Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 1 1 Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 2 2 Yes NCBI 2017_08 genome 38965 21391 Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 2 2 Yes Protozoadb 2010_08 (Protozoadb) 158 34 Yes Sludge/US, Phrap Assembly (meta-genome) 1 1 Yes Soil microbial communities from Minnesota Farm (meta-genome) 1 1 Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 5 5 Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 2 2 Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 3 2 Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 4 4 Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 4 4 Yes STRING v9.0.5 (STRING) 2830 1676 Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 3 3 Yes Uniprot 2018_03 genome 26653 14424 Yes Global Ocean Sampling Expedition (GOS) 347 321 Yes PDB chains (SCOP 1.75 ) (PDB) 47 44 Yes Protein Data Bank (all PDB sequenc) 154 123 Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 363 363 Yes TargetDB 123 53
