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  Home > Genomes > L27 domain domains in all eukaryotic genomes


L27 domain superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 496 significant domains in 441 proteins.

Showing genomes 1 to 25 of 210
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Homo sapiens 76_38 has 89 significant domains in 81 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000221459   2.79e-23   9-63   L27 domain  
ENSP00000222644   0.0000000000001   54-108   L27 domain  
ENSP00000261203   8.63e-23   23-79   L27 domain  
ENSP00000261681   1.77e-22   119-177   L27 domain  
  0.0000000000247   184-235   L27 domain  
ENSP00000269095   0.000000000000177   65-118   L27 domain  
ENSP00000278193   4.71e-26   9-63   L27 domain  
ENSP00000319363   0.00000000000000903   86-136   L27 domain  
ENSP00000320006   5.49e-20   4-63   L27 domain  
ENSP00000326199   2.24e-22   4-65   L27 domain  
ENSP00000337907   0.00000000000102   71-122   L27 domain  
ENSP00000345731   1.37e-21   4-63   L27 domain  
ENSP00000350303   1.33e-21   4-63   L27 domain  
ENSP00000353047   0.00000000000000981   86-136   L27 domain  
ENSP00000360200   2.59e-22   4-65   L27 domain  
ENSP00000364871   0.00000000000102   71-122   L27 domain  
ENSP00000364884   0.00000000000102   71-122   L27 domain  
ENSP00000365272   0.0000033   2-25   L27 domain  
ENSP00000366389   0.000000000000182   82-135   L27 domain  
ENSP00000367396   1.29e-20   341-393   L27 domain  
  0.0000000000000253   403-455   L27 domain  
ENSP00000367400   5.89e-21   341-393   L27 domain  
  0.0000000000000447   403-454   L27 domain  
ENSP00000367405   6.18e-21   341-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSP00000367408   5.89e-21   341-393   L27 domain  
  0.0000000000000453   403-454   L27 domain  
ENSP00000367421   0.0000000000000424   18-70   L27 domain  
ENSP00000370410   5.1e-20   4-63   L27 domain  
ENSP00000375737   1.71e-23   9-63   L27 domain  
ENSP00000376185   1.37e-22   4-63   L27 domain  
ENSP00000376186   9.03e-22   4-63   L27 domain  
ENSP00000376187   1.29e-21   4-63   L27 domain  
ENSP00000379737   0.0000000000001   54-108   L27 domain  
ENSP00000380095   0.00000706   86-121   L27 domain  
ENSP00000381425   0.0000000000000432   67-118   L27 domain  
ENSP00000381430   0.0000000000000706   92-143   L27 domain  
ENSP00000386580   0.00000000000000589   99-149   L27 domain  
ENSP00000387278   0.00000000000000981   86-136   L27 domain  
ENSP00000390403   2.83e-23   4-63   L27 domain  
ENSP00000391020   0.0000000000000418   54-108   L27 domain  
ENSP00000391732   1.33e-21   4-63   L27 domain  
ENSP00000393771   4.32e-23   4-63   L27 domain  
ENSP00000395859   0.000000000000023   54-108   L27 domain  
ENSP00000396474   1.02e-22   4-63   L27 domain  
ENSP00000396768   3.81e-22   4-63   L27 domain  
ENSP00000398007   5.89e-21   341-393   L27 domain  
  0.0000000000000441   403-454   L27 domain  
ENSP00000400169   0.0000000583   4-36   L27 domain  
ENSP00000400526   1.77e-19   336-387   L27 domain  
  0.0000000000000441   397-448   L27 domain  
ENSP00000406160   0.00000000000000981   86-136   L27 domain  
ENSP00000407531   1.33e-21   4-63   L27 domain  
ENSP00000411278   1.33e-21   4-63   L27 domain  
ENSP00000413238   1.26e-21   4-63   L27 domain  
ENSP00000414189   7.46e-23   4-63   L27 domain  
ENSP00000415208   5.1e-20   4-63   L27 domain  
ENSP00000416781   0.00000000000000942   86-136   L27 domain  
ENSP00000428182   0.0000000000002   110-163   L27 domain  
ENSP00000428218   0.0000000000000106   54-108   L27 domain  
ENSP00000428286   0.000000000000188   89-142   L27 domain  
ENSP00000428354   0.0000000000000126   65-119   L27 domain  
ENSP00000428468   0.0000000000000306   48-102   L27 domain  
ENSP00000428938   0.00000000000000569   71-125   L27 domain  
ENSP00000430443   0.00000000000000494   65-119   L27 domain  
  0.0447   9-55   L27 domain  
ENSP00000430540   0.000000000000171   54-107   L27 domain  
ENSP00000430797   0.0000000000000122   65-119   L27 domain  
ENSP00000435353   1.33e-18   9-53   L27 domain  
ENSP00000438012   0.000000000000171   54-107   L27 domain  
ENSP00000439807   5.1e-20   4-63   L27 domain  
ENSP00000444151   5.1e-20   4-63   L27 domain  
ENSP00000446358   5.49e-20   4-63   L27 domain  
ENSP00000447488   5.89e-22   23-79   L27 domain  
ENSP00000448891   6.47e-16   2-45   L27 domain  
ENSP00000448975   3.45e-22   17-73   L27 domain  
ENSP00000450656   1.29e-23   85-143   L27 domain  
ENSP00000451488   1.65e-22   85-143   L27 domain  
  0.0000000000224   150-201   L27 domain  
ENSP00000465486   0.0000000000000173   67-118   L27 domain  
ENSP00000472804   1.06e-23   8-62   L27 domain  
ENSP00000473500   0.00000000000000118   99-149   L27 domain  
  0.0753   49-85   L27 domain  
ENSP00000473899   0.000000000000706   71-122   L27 domain  
ENSP00000474643   7.46e-24   3-57   L27 domain  
ENSP00000478528   0.000000000000177   65-118   L27 domain  
ENSP00000478875   0.00000000000000903   86-136   L27 domain  
ENSP00000479041   1.57e-22   4-65   L27 domain  
ENSP00000479767   0.0000000000000294   54-108   L27 domain  
ENSP00000480071   0.000000000000171   54-107   L27 domain  
ENSP00000483278   0.00000000000104   65-112   L27 domain  
  0.0353   9-55   L27 domain  
 
Weak hits:
ENSP00000382428   0.000883   25-50   L27 domain  
ENSP00000430349   0.053   9-55   L27 domain  

Pan troglodytes 76_2.1.4 has 16 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000001393   2.59e-22   4-65   L27 domain  
ENSPTRP00000008940   0.00000000000000224   23-78   L27 domain  
ENSPTRP00000010959   1.77e-22   119-177   L27 domain  
  0.0000000000247   184-235   L27 domain  
ENSPTRP00000019344   9.42e-23   1-54   L27 domain  
ENSPTRP00000027175   1.37e-21   4-63   L27 domain  
ENSPTRP00000032456   0.0000000000001   54-108   L27 domain  
ENSPTRP00000039090   0.0000000000000589   67-117   L27 domain  
ENSPTRP00000041313   4.71e-26   9-63   L27 domain  
ENSPTRP00000043419   0.000000000000353   65-118   L27 domain  
ENSPTRP00000044282   0.00000000000102   71-122   L27 domain  
ENSPTRP00000046489   5.1e-20   4-63   L27 domain  
ENSPTRP00000047442   5.89e-21   320-372   L27 domain  
  0.0000000000000447   382-433   L27 domain  
ENSPTRP00000048866   0.0000000000000247   86-136   L27 domain  
ENSPTRP00000055640   0.0000000000000318   92-142   L27 domain  
 
Weak hits:
ENSPTRP00000014780   0.000883   25-50   L27 domain  

Gorilla gorilla 76_3.1 has 20 significant domains in 17 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000001667   1.33e-21   4-63   L27 domain  
ENSGGOP00000002110   5.89e-22   23-79   L27 domain  
ENSGGOP00000004830   1.37e-21   4-63   L27 domain  
ENSGGOP00000005054   0.000000000000177   21-75   L27 domain  
ENSGGOP00000005409   1.18e-19   8-67   L27 domain  
ENSGGOP00000006833   0.0000000000000432   92-143   L27 domain  
ENSGGOP00000007641   2.71e-19   344-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSGGOP00000011169   9.42e-22   2-57   L27 domain  
  0.0000000000188   64-115   L27 domain  
ENSGGOP00000012984   0.00000000000102   71-122   L27 domain  
ENSGGOP00000014671   0.00000000000000981   86-136   L27 domain  
ENSGGOP00000018946   0.00000000000282   42-93   L27 domain  
ENSGGOP00000018958   1.53e-19   200-251   L27 domain  
  0.0000000000000371   261-312   L27 domain  
ENSGGOP00000019585   0.00000000000000981   86-136   L27 domain  
ENSGGOP00000020851   4.71e-26   9-63   L27 domain  
ENSGGOP00000022101   1.18e-19   4-63   L27 domain  
ENSGGOP00000025622   0.0000000000000432   67-118   L27 domain  
ENSGGOP00000026629   0.00000000000000903   86-136   L27 domain  
 
Weak hits:
ENSGGOP00000006603   0.000765   25-50   L27 domain  

Pongo abelii 76_2 has 16 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000001500   2.55e-22   4-65   L27 domain  
ENSPPYP00000001501   2.51e-22   4-65   L27 domain  
ENSPPYP00000002532   0.00000000000247   70-121   L27 domain  
ENSPPYP00000003906   4.71e-26   9-63   L27 domain  
ENSPPYP00000004268   0.00000235   2-25   L27 domain  
ENSPPYP00000005475   5.89e-22   23-79   L27 domain  
ENSPPYP00000006727   2.47e-17   130-178   L27 domain  
  0.00000000612   197-238   L27 domain  
ENSPPYP00000009387   0.000000000000177   65-118   L27 domain  
ENSPPYP00000009389   0.0000000000000589   67-117   L27 domain  
ENSPPYP00000011459   2.79e-23   9-63   L27 domain  
ENSPPYP00000014613   0.0000188   86-121   L27 domain  
ENSPPYP00000016163   1.37e-21   4-63   L27 domain  
ENSPPYP00000021524   5.1e-20   4-63   L27 domain  
ENSPPYP00000022673   6.18e-21   340-392   L27 domain  
  0.0000000000000459   402-453   L27 domain  

Nomascus leucogenys 76_1.0 has 15 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000670   1.65e-22   119-177   L27 domain  
  0.0000000000247   184-235   L27 domain  
ENSNLEP00000002540   0.00000000000000115   4-61   L27 domain  
ENSNLEP00000002678   2.71e-19   344-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSNLEP00000006008   2.79e-23   9-63   L27 domain  
ENSNLEP00000006311   1.84e-21   23-79   L27 domain  
ENSNLEP00000006827   0.0000000000002   110-163   L27 domain  
ENSNLEP00000006888   0.0000000000000432   67-118   L27 domain  
ENSNLEP00000018041   0.0000000000001   54-108   L27 domain  
ENSNLEP00000018128   2.79e-22   4-65   L27 domain  
ENSNLEP00000020665   0.00000000000102   71-122   L27 domain  
ENSNLEP00000021429   1.61e-19   4-61   L27 domain  
ENSNLEP00000021690   4.71e-26   9-63   L27 domain  
ENSNLEP00000023194   0.0000000000001   54-108   L27 domain  
 
Weak hits:
ENSNLEP00000009746   0.00436   25-50   L27 domain  

Papio anubis 76 has 15 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000006096   4.32e-22   4-65   L27 domain  
ENSPANP00000006134   8.24e-21   341-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSPANP00000006976   5.89e-22   23-79   L27 domain  
ENSPANP00000007121   0.00000000000000785   103-153   L27 domain  
ENSPANP00000008345   4.71e-26   9-63   L27 domain  
ENSPANP00000015273   2.79e-23   9-63   L27 domain  
ENSPANP00000017108   1.77e-22   119-177   L27 domain  
  0.0000000000247   184-235   L27 domain  
ENSPANP00000017229   0.0000000000001   54-108   L27 domain  
ENSPANP00000019215   1.81e-20   4-63   L27 domain  
ENSPANP00000020043   0.00000000000447   71-122   L27 domain  
ENSPANP00000020044   0.00000000000824   35-86   L27 domain  
ENSPANP00000020761   0.0000000000000647   67-118   L27 domain  
ENSPANP00000020763   0.000000000000177   65-118   L27 domain  

Macaca mulatta 76_1 has 25 significant domains in 22 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000015316   5.89e-22   23-79   L27 domain  
ENSMMUP00000017441   0.0000000000000324   67-118   L27 domain  
ENSMMUP00000017443   0.0000000000000177   67-118   L27 domain  
ENSMMUP00000021791   2.12e-20   1-57   L27 domain  
ENSMMUP00000021792   2.08e-20   1-57   L27 domain  
ENSMMUP00000021794   1.88e-20   1-57   L27 domain  
ENSMMUP00000022270   0.0000000000001   54-108   L27 domain  
ENSMMUP00000022271   0.0000000000001   54-108   L27 domain  
ENSMMUP00000023867   0.00000000000349   86-138   L27 domain  
ENSMMUP00000023868   0.00000000000000549   86-136   L27 domain  
ENSMMUP00000023871   0.00000153   86-121   L27 domain  
ENSMMUP00000025473   3.92e-20   6-64   L27 domain  
ENSMMUP00000025474   3.92e-20   6-64   L27 domain  
ENSMMUP00000027193   0.00000000000447   71-122   L27 domain  
ENSMMUP00000028216   1.77e-22   119-177   L27 domain  
  0.000883   184-238   L27 domain  
ENSMMUP00000029724   1.77e-19   336-387   L27 domain  
  0.0000000000000441   397-448   L27 domain  
ENSMMUP00000029727   1.18e-18   343-393   L27 domain  
  0.0000000000000447   403-454   L27 domain  
ENSMMUP00000030433   4.71e-26   9-63   L27 domain  
ENSMMUP00000031529   2.79e-23   9-63   L27 domain  
ENSMMUP00000038226   2e-20   1-57   L27 domain  
ENSMMUP00000038227   2e-20   1-57   L27 domain  
ENSMMUP00000041117   1.18e-18   343-393   L27 domain  
  0.0000000000000453   403-454   L27 domain  

Callithrix jacchus 76_3.2.1 has 41 significant domains in 38 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000000311   1.06e-22   3-57   L27 domain  
ENSCJAP00000000312   1.26e-21   9-63   L27 domain  
ENSCJAP00000014286   0.0000000000000883   54-108   L27 domain  
ENSCJAP00000016470   5e-21   220-272   L27 domain  
  0.0000000000000383   282-333   L27 domain  
ENSCJAP00000016537   1.77e-19   336-387   L27 domain  
  0.0000000000000441   397-448   L27 domain  
ENSCJAP00000018813   4.71e-26   9-63   L27 domain  
ENSCJAP00000019250   0.000000000000165   54-107   L27 domain  
ENSCJAP00000019272   0.000000000000353   80-133   L27 domain  
ENSCJAP00000019453   0.0000000000000706   72-123   L27 domain  
ENSCJAP00000019470   0.0000000000000255   92-143   L27 domain  
ENSCJAP00000019485   0.0000000000000706   85-136   L27 domain  
ENSCJAP00000019496   0.0000000000000706   67-118   L27 domain  
ENSCJAP00000022247   2.15e-20   7-65   L27 domain  
ENSCJAP00000022268   1.77e-20   4-63   L27 domain  
ENSCJAP00000024060   0.00000000000282   35-86   L27 domain  
ENSCJAP00000024062   0.00000000000102   71-122   L27 domain  
ENSCJAP00000024064   0.00000000000102   71-122   L27 domain  
ENSCJAP00000025463   1.33e-21   4-63   L27 domain  
ENSCJAP00000025474   1.33e-21   4-63   L27 domain  
ENSCJAP00000025477   1.37e-21   4-63   L27 domain  
ENSCJAP00000028493   7.65e-22   119-177   L27 domain  
  0.0000000000212   184-235   L27 domain  
ENSCJAP00000029715   0.00002   86-121   L27 domain  
ENSCJAP00000029906   3.26e-22   4-65   L27 domain  
ENSCJAP00000029916   3.37e-22   4-65   L27 domain  
ENSCJAP00000029938   4.32e-22   4-65   L27 domain  
ENSCJAP00000035912   1.29e-19   1-52   L27 domain  
ENSCJAP00000044163   1.77e-20   4-63   L27 domain  
ENSCJAP00000044298   1.77e-20   4-63   L27 domain  
ENSCJAP00000044724   3.81e-22   4-63   L27 domain  
ENSCJAP00000046482   1.33e-21   4-63   L27 domain  
ENSCJAP00000046550   0.000000000000171   65-118   L27 domain  
ENSCJAP00000046563   0.0000000000000824   86-136   L27 domain  
ENSCJAP00000046695   0.0000000000137   86-138   L27 domain  
ENSCJAP00000047966   0.00000000000294   31-82   L27 domain  
ENSCJAP00000048052   0.000000000000182   89-142   L27 domain  
ENSCJAP00000049373   0.000000000671   67-114   L27 domain  
ENSCJAP00000049812   0.0000000000000883   54-108   L27 domain  
ENSCJAP00000050100   0.000000000000182   82-135   L27 domain  
 
Weak hits:
ENSCJAP00000028574   0.000742   25-50   L27 domain  
ENSCJAP00000030932   0.000883   25-50   L27 domain  

Otolemur garnettii 76_3 has 14 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000002677   1.37e-21   4-64   L27 domain  
ENSOGAP00000003031   0.0000000000001   54-108   L27 domain  
ENSOGAP00000004120   5.1e-22   10-66   L27 domain  
ENSOGAP00000004336   1.35e-18   343-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSOGAP00000005466   2.16e-20   5-63   L27 domain  
ENSOGAP00000005625   2.79e-23   9-63   L27 domain  
ENSOGAP00000007024   3.18e-21   4-63   L27 domain  
ENSOGAP00000007480   0.0000000000000432   80-131   L27 domain  
ENSOGAP00000007487   0.000000000000188   99-152   L27 domain  
ENSOGAP00000011428   0.00000000000859   22-72   L27 domain  
ENSOGAP00000012008   4.71e-26   9-63   L27 domain  
ENSOGAP00000019223   4.3e-23   119-177   L27 domain  
  0.0000000000518   184-235   L27 domain  
 
Weak hits:
ENSOGAP00000009634   0.00165   107-136   L27 domain  

Microcebus murinus 76_1 has 10 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000251   0.0000000000000141   341-385   L27 domain  
  0.00000000000153   381-429   L27 domain  
ENSMICP00000000835   0.0000000000341   79-122   L27 domain  
ENSMICP00000003836   0.00000000471   54-106   L27 domain  
ENSMICP00000004705   4.71e-26   9-63   L27 domain  
ENSMICP00000005120   0.0000000000000361   67-118   L27 domain  
ENSMICP00000005141   0.000000000000182   90-143   L27 domain  
ENSMICP00000009817   0.0000000118   193-235   L27 domain  
ENSMICP00000012206   0.0000000000553   85-137   L27 domain  
ENSMICP00000014163   0.0000824   43-63   L27 domain  
 
Weak hits:
ENSMICP00000003915   0.00118   25-50   L27 domain  

Rattus norvegicus 76_5.0 has 14 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000006083   5.1e-22   10-66   L27 domain  
ENSRNOP00000010112   1.18e-21   5-64   L27 domain  
ENSRNOP00000010211   5.1e-21   5-64   L27 domain  
ENSRNOP00000012005   6.47e-23   119-177   L27 domain  
  0.000000000224   185-235   L27 domain  
ENSRNOP00000025458   0.0000000000114   71-122   L27 domain  
ENSRNOP00000028164   2.79e-23   9-63   L27 domain  
ENSRNOP00000028264   0.000000000000118   67-118   L27 domain  
ENSRNOP00000037380   0.0000000000000589   54-108   L27 domain  
ENSRNOP00000051321   9.42e-20   4-63   L27 domain  
ENSRNOP00000052061   0.000000000000206   65-118   L27 domain  
ENSRNOP00000055672   1.81e-21   4-63   L27 domain  
ENSRNOP00000065432   2.71e-22   23-79   L27 domain  
ENSRNOP00000065941   4.71e-26   9-63   L27 domain  

Mus musculus 76_38 has 42 significant domains in 37 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000003971   2.79e-23   9-63   L27 domain  
ENSMUSP00000017458   0.000000000000206   65-118   L27 domain  
ENSMUSP00000020057   5.89e-22   23-79   L27 domain  
ENSMUSP00000023454   1.29e-21   4-63   L27 domain  
ENSMUSP00000028583   4.71e-26   9-63   L27 domain  
ENSMUSP00000033321   1.77e-19   336-387   L27 domain  
  0.0000000000000447   397-448   L27 domain  
ENSMUSP00000038772   0.0000000000000706   54-108   L27 domain  
ENSMUSP00000039314   0.0000000000000706   54-108   L27 domain  
ENSMUSP00000049176   5.1e-21   5-64   L27 domain  
ENSMUSP00000055469   0.0000000000000589   67-118   L27 domain  
ENSMUSP00000064280   1.41e-21   4-63   L27 domain  
ENSMUSP00000070711   0.000000000000157   85-135   L27 domain  
ENSMUSP00000077914   0.000000000000157   85-135   L27 domain  
ENSMUSP00000080683   1.35e-22   120-177   L27 domain  
  0.000000000224   185-235   L27 domain  
ENSMUSP00000097581   1.33e-21   4-63   L27 domain  
ENSMUSP00000097967   0.000000000000212   82-135   L27 domain  
ENSMUSP00000097969   0.0000000000000589   67-118   L27 domain  
ENSMUSP00000099894   7.06e-20   4-63   L27 domain  
ENSMUSP00000102645   1.22e-21   5-64   L27 domain  
ENSMUSP00000102648   2.12e-21   5-64   L27 domain  
ENSMUSP00000102649   3.92e-21   5-64   L27 domain  
ENSMUSP00000102785   0.00000000000000942   67-118   L27 domain  
ENSMUSP00000102786   0.0000000000000589   67-118   L27 domain  
ENSMUSP00000102883   7.06e-20   4-63   L27 domain  
ENSMUSP00000109914   0.000000000000165   104-154   L27 domain  
ENSMUSP00000110855   1.37e-21   4-63   L27 domain  
ENSMUSP00000110859   1.33e-21   4-63   L27 domain  
ENSMUSP00000111096   1.77e-19   336-387   L27 domain  
  0.0000000000000441   397-448   L27 domain  
ENSMUSP00000111098   1.77e-19   336-387   L27 domain  
  0.0000000000000453   397-448   L27 domain  
ENSMUSP00000111535   0.0000000000271   71-122   L27 domain  
ENSMUSP00000114187   1.29e-17   202-249   L27 domain  
ENSMUSP00000120299   1.65e-19   310-361   L27 domain  
  0.0000000000000424   371-422   L27 domain  
ENSMUSP00000125880   0.0000000000000706   54-108   L27 domain  
ENSMUSP00000129355   0.0000000000000306   54-108   L27 domain  
ENSMUSP00000138782   7.06e-22   4-63   L27 domain  
ENSMUSP00000140352   0.000000000000141   85-135   L27 domain  
ENSMUSP00000140957   0.000000000000157   85-135   L27 domain  
 
Weak hits:
ENSMUSP00000104230   0.00259   25-49   L27 domain  

Dipodomys ordii 76_1 has 13 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000002587   4.71e-26   9-63   L27 domain  
ENSDORP00000003855   0.000000000000141   15-69   L27 domain  
ENSDORP00000003903   5.1e-22   4-64   L27 domain  
ENSDORP00000005964   7.46e-20   3-60   L27 domain  
ENSDORP00000009609   2.83e-21   9-63   L27 domain  
ENSDORP00000012401   5.59e-21   341-393   L27 domain  
  0.0000000000000424   403-454   L27 domain  
ENSDORP00000013074   0.0000000000488   79-121   L27 domain  
ENSDORP00000013497   1.61e-16   24-68   L27 domain  
ENSDORP00000013773   4.3e-23   119-177   L27 domain  
  0.00000000006   184-235   L27 domain  
ENSDORP00000014091   0.000000000000182   89-142   L27 domain  
ENSDORP00000014214   0.000000000000188   87-138   L27 domain  

Ictidomys tridecemlineatus 76_2 has 15 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000001391   5.49e-23   126-182   L27 domain  
  0.0000000000871   190-240   L27 domain  
ENSSTOP00000001701   0.0000000000000577   26-80   L27 domain  
ENSSTOP00000004849   4.71e-22   4-63   L27 domain  
ENSSTOP00000005325   3.06e-20   79-130   L27 domain  
  0.0000000000000153   140-192   L27 domain  
ENSSTOP00000006516   0.0000000000000647   67-118   L27 domain  
ENSSTOP00000006561   0.000000000000182   82-135   L27 domain  
ENSSTOP00000008009   4.71e-26   9-63   L27 domain  
ENSSTOP00000013791   9.03e-22   4-64   L27 domain  
ENSSTOP00000014150   4.12e-22   23-79   L27 domain  
ENSSTOP00000017071   0.0000000000141   1-43   L27 domain  
ENSSTOP00000017432   0.000000000000785   72-122   L27 domain  
ENSSTOP00000017676   0.0000000000742   2-43   L27 domain  
ENSSTOP00000022448   2.79e-23   9-63   L27 domain  

Heterocephalus glaber v1.7-2 has 14 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000221459   1.37e-21   7-58   L27 domain  
HGL_H00000261203-1   1.92e-19   1-52   L27 domain  
HGL_H00000261203-2   1.02e-19   23-77   L27 domain  
HGL_H00000261681   4.3e-23   119-177   L27 domain  
  0.0000000000636   184-233   L27 domain  
HGL_H00000278193   1.37e-23   61-112   L27 domain  
HGL_H00000320006   3.92e-20   4-63   L27 domain  
HGL_H00000345731   1.37e-21   4-63   L27 domain  
HGL_H00000360200   8.24e-19   4-64   L27 domain  
HGL_H00000364871   0.00000000000106   95-146   L27 domain  
HGL_H00000367405   3.83e-21   64-116   L27 domain  
  0.0000000000000288   126-178   L27 domain  
HGL_H00000381430   0.00000000000989   67-120   L27 domain  
HGL_H00000386401   0.000000000000106   92-146   L27 domain  
 
Weak hits:
HGL_H00000225410   0.0706   88-119   L27 domain  
HGL_H00000225995   0.0188   252-289   L27 domain  

Cavia porcellus 76_3 has 14 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000001243   1.29e-19   1-52   L27 domain  
ENSCPOP00000001499   0.00000000000282   20-71   L27 domain  
ENSCPOP00000002242   2.79e-23   9-63   L27 domain  
ENSCPOP00000002984   1.82e-22   119-177   L27 domain  
  0.0000000000318   184-235   L27 domain  
ENSCPOP00000008053   8.63e-20   6-63   L27 domain  
ENSCPOP00000009735   1.37e-21   4-63   L27 domain  
ENSCPOP00000009747   1.77e-19   336-387   L27 domain  
  0.0000000000000394   397-448   L27 domain  
ENSCPOP00000012849   0.00000000000112   87-136   L27 domain  
ENSCPOP00000013975   9.03e-26   9-63   L27 domain  
ENSCPOP00000014035   0.0000000000001   54-108   L27 domain  
ENSCPOP00000014377   0.00000000000589   65-118   L27 domain  
ENSCPOP00000019232   0.000000000000188   67-118   L27 domain  
 
Weak hits:
ENSCPOP00000013642   0.051   998-1034   L27 domain  
ENSCPOP00000020709   0.000859   26-50   L27 domain  

Oryctolagus cuniculus 76_2 has 15 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000003528   3.81e-24   14-65   L27 domain  
ENSOCUP00000003636   5.89e-22   23-79   L27 domain  
ENSOCUP00000003810   5.89e-20   4-63   L27 domain  
ENSOCUP00000004211   1.77e-19   336-387   L27 domain  
  0.0000000000000453   397-448   L27 domain  
ENSOCUP00000008889   5.89e-21   4-63   L27 domain  
ENSOCUP00000009960   0.000000000000177   105-158   L27 domain  
ENSOCUP00000010331   6.47e-23   119-177   L27 domain  
  0.00000000002   184-235   L27 domain  
ENSOCUP00000012333   0.00000000000777   72-122   L27 domain  
ENSOCUP00000013562   8.63e-22   4-64   L27 domain  
ENSOCUP00000016121   0.000000000000129   67-118   L27 domain  
ENSOCUP00000019847   0.0000000000000706   54-108   L27 domain  
ENSOCUP00000022133   0.000000000000365   85-135   L27 domain  
ENSOCUP00000027049   0.00000000000871   108-158   L27 domain  
 
Weak hits:
ENSOCUP00000022969   0.00353   26-50   L27 domain  

Ochotona princeps 76 has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000002571   0.0000000000102   71-122   L27 domain  
ENSOPRP00000003044   0.0000000000000694   88-139   L27 domain  
ENSOPRP00000003946   0.0000000129   54-102   L27 domain  
ENSOPRP00000004114   2.12e-18   119-176   L27 domain  
  0.0104   184-217   L27 domain  
ENSOPRP00000004644   2.63e-20   4-62   L27 domain  
ENSOPRP00000006403   5.1e-21   4-63   L27 domain  
ENSOPRP00000007736   4.71e-26   9-63   L27 domain  
ENSOPRP00000008243   4.71e-19   1-51   L27 domain  
ENSOPRP00000011027   0.0000000000000647   285-326   L27 domain  
ENSOPRP00000012930   0.000000000000836   15-68   L27 domain  
ENSOPRP00000014778   0.00000271   1-25   L27 domain  
 
Weak hits:
ENSOPRP00000005795   0.00377   26-49   L27 domain  

Tupaia belangeri 76 has 9 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000002589   1.02e-21   4-64   L27 domain  
ENSTBEP00000003334   0.00000118   49-75   L27 domain  
ENSTBEP00000006634   0.0000282   403-438   L27 domain  
ENSTBEP00000006850   0.0000000000859   79-122   L27 domain  
ENSTBEP00000008645   0.000000000518   65-111   L27 domain  
ENSTBEP00000009087   2.86e-23   119-177   L27 domain  
  0.00565   184-218   L27 domain  
ENSTBEP00000010355   5.89e-20   5-63   L27 domain  
ENSTBEP00000010705   8.63e-20   1-56   L27 domain  
ENSTBEP00000012281   0.0000000000000824   67-118   L27 domain  

Sus scrofa 76_10.2 has 21 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000001003   5.1e-22   10-66   L27 domain  
ENSSSCP00000002484   4.3e-23   119-177   L27 domain  
  0.0000000000518   184-235   L27 domain  
ENSSSCP00000003424   2.79e-23   9-63   L27 domain  
ENSSSCP00000011806   0.00000000000612   32-82   L27 domain  
ENSSSCP00000012604   1.02e-21   4-63   L27 domain  
ENSSSCP00000013039   1.53e-19   215-266   L27 domain  
  0.0000000000000383   276-327   L27 domain  
ENSSSCP00000017707   0.0000000000000765   54-108   L27 domain  
ENSSSCP00000018402   0.000000000000341   56-109   L27 domain  
ENSSSCP00000018407   0.0000000000000204   67-118   L27 domain  
ENSSSCP00000021603   0.0000000000000275   84-134   L27 domain  
ENSSSCP00000024234   0.0000000000000283   84-134   L27 domain  
ENSSSCP00000027227   2.59e-23   4-63   L27 domain  
ENSSSCP00000027840   0.0000000000000267   84-134   L27 domain  
ENSSSCP00000027907   4.71e-26   9-63   L27 domain  
ENSSSCP00000028067   4.24e-23   4-62   L27 domain  
ENSSSCP00000029337   1.06e-21   4-63   L27 domain  
ENSSSCP00000030793   1.77e-19   336-387   L27 domain  
  0.0000000000000447   397-448   L27 domain  
ENSSSCP00000030935   1.1e-21   4-63   L27 domain  
 
Weak hits:
ENSSSCP00000026725   0.000989   26-50   L27 domain  

Bos taurus 76_3.1 has 13 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000001914   4.71e-26   9-63   L27 domain  
ENSBTAP00000015103   5.89e-22   23-79   L27 domain  
ENSBTAP00000015625   5.41e-23   119-177   L27 domain  
  0.0000000000494   184-235   L27 domain  
ENSBTAP00000020351   0.0000000000000883   65-119   L27 domain  
ENSBTAP00000023316   0.0000000000000204   67-118   L27 domain  
ENSBTAP00000026825   1.77e-19   336-387   L27 domain  
  0.0000000000000447   397-448   L27 domain  
ENSBTAP00000029300   5.1e-22   4-64   L27 domain  
ENSBTAP00000034684   0.000000000000171   65-118   L27 domain  
ENSBTAP00000036176   0.0000000000033   72-122   L27 domain  
ENSBTAP00000040675   7.46e-23   9-63   L27 domain  
ENSBTAP00000053177   1.84e-19   19-78   L27 domain  

Ovis aries 76_3.1 has 19 significant domains in 16 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000002906   8.24e-20   269-320   L27 domain  
  0.00000000000004   330-381   L27 domain  
ENSOARP00000002908   7.65e-20   204-255   L27 domain  
  0.0000000000000377   265-316   L27 domain  
ENSOARP00000006449   0.0000000000000612   67-118   L27 domain  
ENSOARP00000006782   0.000000000000182   82-135   L27 domain  
ENSOARP00000009668   5.49e-22   4-64   L27 domain  
ENSOARP00000009671   5.1e-22   4-64   L27 domain  
ENSOARP00000011620   0.0000000000000883   54-108   L27 domain  
ENSOARP00000011622   0.0000000000000883   54-108   L27 domain  
ENSOARP00000014880   8.24e-20   4-63   L27 domain  
ENSOARP00000014885   8.24e-20   4-63   L27 domain  
ENSOARP00000016183   4.71e-26   9-63   L27 domain  
ENSOARP00000016275   5.89e-22   23-79   L27 domain  
ENSOARP00000016565   0.000000000000785   72-122   L27 domain  
ENSOARP00000018609   0.00000000000000785   89-139   L27 domain  
ENSOARP00000021884   1.22e-21   4-63   L27 domain  
ENSOARP00000022750   4.3e-23   119-177   L27 domain  
  0.0000000000518   184-235   L27 domain  
 
Weak hits:
ENSOARP00000002539   0.000624   31-65   L27 domain  

Vicugna pacos 76_1 has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000001500   8.63e-20   4-63   L27 domain  
ENSVPAP00000001781   5.89e-22   23-79   L27 domain  
ENSVPAP00000002313   0.000000000000165   54-108   L27 domain  
ENSVPAP00000002529   0.0000000000188   61-109   L27 domain  
ENSVPAP00000003771   3.92e-22   4-64   L27 domain  
ENSVPAP00000004822   1.45e-24   11-62   L27 domain  
ENSVPAP00000005290   4.3e-23   119-177   L27 domain  
  0.00753   184-218   L27 domain  
ENSVPAP00000009653   1.22e-21   4-63   L27 domain  
 
Weak hits:
ENSVPAP00000005742   0.0447   49-81   L27 domain  
ENSVPAP00000006221   0.000718   89-123   L27 domain  

Tursiops truncatus 76_1 has 13 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000002798   3.92e-20   4-63   L27 domain  
ENSTTRP00000004880   0.0000000000000659   86-137   L27 domain  
ENSTTRP00000006840   1.65e-19   344-393   L27 domain  
  0.0000000000000459   403-454   L27 domain  
ENSTTRP00000007600   0.0000000000271   72-122   L27 domain  
ENSTTRP00000008225   1.06e-21   4-64   L27 domain  
ENSTTRP00000008834   0.0000000000000271   89-139   L27 domain  
ENSTTRP00000011781   6.67e-17   6-56   L27 domain  
ENSTTRP00000012834   4.71e-26   9-63   L27 domain  
ENSTTRP00000013931   5.89e-22   23-79   L27 domain  
ENSTTRP00000014973   0.0000000129   141-184   L27 domain  
ENSTTRP00000015838   0.0000000000000883   54-108   L27 domain  
ENSTTRP00000016208   2.79e-23   9-63   L27 domain  
 
Weak hits:
ENSTTRP00000004911   0.000706   87-124   L27 domain  
ENSTTRP00000009211   0.00153   28-52   L27 domain  

Mustela putorius furo 76_1.0 has 14 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000000252   0.0000000000000165   86-136   L27 domain  
ENSMPUP00000003224   4.71e-21   108-159   L27 domain  
ENSMPUP00000003739   1.41e-21   4-63   L27 domain  
ENSMPUP00000004156   1.84e-19   4-63   L27 domain  
ENSMPUP00000006936   4.3e-23   119-177   L27 domain  
  0.0000000000871   184-235   L27 domain  
ENSMPUP00000007489   5.49e-22   5-64   L27 domain  
ENSMPUP00000009539   0.000000000000188   65-118   L27 domain  
ENSMPUP00000009559   0.0000000000000306   67-118   L27 domain  
ENSMPUP00000011109   4.71e-26   9-63   L27 domain  
ENSMPUP00000012545   1.88e-19   336-387   L27 domain  
  0.0000000000000459   397-448   L27 domain  
ENSMPUP00000013334   0.000000000000177   54-108   L27 domain  
ENSMPUP00000014965   0.00000000000459   72-122   L27 domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   25926 25926
No Yes Homo sapiens 76_38 Human 89 81
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 16 14
No Yes Gorilla gorilla 76_3.1 Western gorilla 20 17
No Yes Pongo abelii 76_2 Sumatran orangutan 16 14
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 15 13
No Yes Papio anubis 76 Olive baboon 15 13
No Yes Macaca mulatta 76_1 Rhesus monkey 25 22
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 41 38
No Yes Otolemur garnettii 76_3 Small-eared galago 14 12
No Yes Microcebus murinus 76_1 Gray mouse lemur 10 9
No Yes Rattus norvegicus 76_5.0 Norway rat 14 13
No Yes Mus musculus 76_38 House mouse 42 37
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 13 11
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 15 13
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 14 12
No Yes Cavia porcellus 76_3 Domestic guinea pig 14 12
No Yes Oryctolagus cuniculus 76_2 Rabbit 15 13
No Yes Ochotona princeps 76 American pika 11 11
No Yes Tupaia belangeri 76 Northern tree shrew 9 9
No Yes Sus scrofa 76_10.2 Pig 21 18
No Yes Bos taurus 76_3.1 Cattle 13 11
No Yes Ovis aries 76_3.1 Sheep 19 16
No Yes Vicugna pacos 76_1 Alpaca 8 8
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 13 12
No Yes Mustela putorius furo 76_1.0 Domestic ferret 14 12
No Yes Ailuropoda melanoleuca 76_1 Giant panda 17 14
No Yes Canis familiaris 76_3.1 Dog 22 19
No Yes Felis catus 76_6.2 Domestic cat 15 13
No Yes Equus caballus 76_2 Horse 16 13
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 13
No Yes Pteropus vampyrus 76_1 Large flying fox 11 11
No Yes Sorex araneus 76_1 European shrew 10 9
No Yes Erinaceus europaeus 76 Western European hedgehog 13 11
No Yes Procavia capensis 76_1 Cape rock hyrax 9 9
No Yes Loxodonta africana 76_3 African savanna elephant 22 18
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 10
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 15 13
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 9
No Yes Macropus eugenii 76_1.0 Tammar wallaby 8 7
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 14 12
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 14 12
No Yes Ornithorhynchus anatinus 76_5 Platypus 12 10
No Yes Saccoglossus kowalevskii v3.0   10 8
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 12 10
No Yes Gallus gallus 76_4 Chicken 15 13
No Yes Anas platyrhynchos 76_1.0 Mallard 13 11
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 12 10
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 13 11
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 16 12
No Yes Anolis carolinensis 76_2.0 Green anole 17 14
No Yes Xenopus laevis African clawed frog 16 11
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 25 21
No Yes Latimeria chalumnae 76_1 Coelacanth 19 16
No Yes Lepisosteus oculatus 76 Spotted gar 26 22
No Yes Gadus morhua 76_1 Atlantic cod 21 19
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 24 21
No Yes Takifugu rubripes 76_4 Torafugu 59 48
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 29 26
No Yes Oryzias latipes 76_1 Japanese medaka 32 27
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 25 21
No Yes Poecilia formosa 76 Amazon molly 25 21
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 31 25
No Yes Astyanax mexicanus 76 Mexican tetra 23 18
No Yes Danio rerio 76_9 Zebrafish 49 42
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 11 8
No Yes Ciona intestinalis 76 Vase tunicate 5 5
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 7 7
No Yes Adineta vaga   17 16
No Yes Octopus bimaculoides 280   5 5
No Yes Crassostrea gigas 22 Pacific oyster 7 7
No Yes Lottia gigantea Owl limpet 9 8
No Yes Helobdella robusta   14 13
No Yes Capitella sp. I   9 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 4
No Yes Heliconius melpomene Postman butterfly 3 3
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 7 5
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 11 11
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 5 5
No Yes Linepithema humile v1.1 Argentine ant 6 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 6
No Yes Solenopsis invicta v.2.2.3 Red fire ant 5 5
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 5 5
No Yes Atta cephalotes v1.1   6 6
No Yes Camponotus floridanus v3.3 Florida carpenter ant 5 5
No Yes Lucilia cuprina Australian sheep blowfly 6 5
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   5 5
No Yes Drosophila pseudoobscura 2.13   5 5
No Yes Drosophila persimilis 1.3   5 5
No Yes Drosophila suzukii   4 3
No Yes Drosophila yakuba 1.3   4 4
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   6 6
No Yes Drosophila melanogaster 76_5 Fruit fly 23 20
No Yes Drosophila erecta 1.3   5 5
No Yes Drosophila ananassae 1.3   5 5
No Yes Drosophila virilis 1.2   5 5
No Yes Drosophila mojavensis 1.3   5 5
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 8
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 5
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 7 6
No Yes Tribolium castaneum 3.0 Red flour beetle 7 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 4 4
No Yes Acyrthosiphon pisum Pea aphid 5 5
No Yes Rhodnius prolixus 22   4 4
No Yes Daphnia pulex Common water flea 5 4
No Yes Strigamia maritima 22   7 7
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 4 4
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 4
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 3 3
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   3 3
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   4 3
No Yes Echinococcus multilocularis   5 4
No Yes Echinococcus granulosus   5 4
No Yes Taenia solium Pork tapeworm 5 4
No Yes Schistosoma mansoni   8 7
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 8 7
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   4 4
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 31 25
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 20 18
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 12 11
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 91 81
No Yes Homo sapiens (NCBI version) Human 22 18
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 16 14
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Homo sapiens 69_37 Human 17 15
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 15 13
No Yes Gorilla gorilla 69_3.1 Western gorilla 12 10
No Yes Pongo abelii 69_2 Sumatran orangutan 15 13
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 12
No Yes Macaca mulatta 69_1 Rhesus monkey 12 11
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 16 14
No Yes Otolemur garnettii 69_3 Small-eared galago 14 12
No Yes Microcebus murinus 69_1 Gray mouse lemur 10 9
No Yes Rattus norvegicus 69_3.4 Norway rat 15 13
No Yes Mus musculus 69_38 House mouse 15 13
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 13 11
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 14 12
No Yes Cavia porcellus 69_3 Domestic guinea pig 14 12
No Yes Oryctolagus cuniculus 69_2 Rabbit 14 12
No Yes Ochotona princeps 69 American pika 11 11
No Yes Tupaia belangeri 69 Northern tree shrew 9 9
No Yes Sus scrofa 69_10.2 Pig 15 13
No Yes Bos taurus 69_3.1 Cattle 13 11
No Yes Vicugna pacos 69_1 Alpaca 8 8
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 13 12
No Yes Mustela putorius furo 69_1.0 Domestic ferret 14 12
No Yes Ailuropoda melanoleuca 69_1 Giant panda 14 12
No Yes Canis familiaris 69_3.1 Dog 14 12
No Yes Felis catus 69 Domestic cat 10 9
No Yes Equus caballus 69_2 Horse 13 11
No Yes Myotis lucifugus 69_2.0 Little brown bat 14 12
No Yes Pteropus vampyrus 69_1 Large flying fox 11 11
No Yes Sorex araneus 69_1 European shrew 10 9
No Yes Erinaceus europaeus 69 Western European hedgehog 13 11
No Yes Procavia capensis 69_1 Cape rock hyrax 9 9
No Yes Loxodonta africana 69_3 African savanna elephant 16 14
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 10
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 6 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 9
No Yes Macropus eugenii 69_1.0 Tammar wallaby 8 7
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 13 11
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 14 12
No Yes Ornithorhynchus anatinus 69_5 Platypus 11 9
No Yes Petromyzon marinus 69_7.0 Sea lamprey 4 4
No Yes Meleagris gallopavo 69_2 Turkey 12 10
No Yes Gallus gallus 69_2 Chicken 14 12
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 12 10
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 14 11
No Yes Anolis carolinensis 69_2.0 Green anole 14 12
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 16 14
No Yes Latimeria chalumnae 69_1 Coelacanth 15 13
No Yes Gadus morhua 69_1 Atlantic cod 21 19
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 22 19
No Yes Takifugu rubripes 69_4 Torafugu 20 17
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 24 21
No Yes Oryzias latipes 69_1 Japanese medaka 25 21
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 25 21
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 22 18
No Yes Danio rerio 69_9 Zebrafish 24 21
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 4
No Yes Ciona intestinalis 69 Vase tunicate 5 5
No Yes Drosophila melanogaster 69_5 Fruit fly 6 5
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes NCBI 2017_08 genome   15593 12659
No Yes STRING v9.0.5 (STRING)   499 434
No Yes Uniprot 2018_03 genome   5764 4948
No Yes PDB chains (SCOP 1.75) (PDB)   10 10
No Yes Protein Data Bank (all PDB sequenc)   43 29
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   79 76
No Yes TargetDB (Targets)   5 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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