SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


TRAM domain family domain assignments


No domain assignments for these genomes.


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View all assignments containing a TRAM domain domain in each group of genomes.

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Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   587 587
No Yes Methanosarcina acetivorans C2A   4 4
No Yes Methanosarcina mazei Go1   4 4
No Yes Methanosarcina barkeri str. Fusaro   4 4
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanosarcina mazei Tuc01   2 2
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Methanococcus maripaludis S2   1 1
No Yes NCBI 2017_08 genome   359 359
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   16 16
No Yes Uniprot 2018_03 genome   154 154
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   5 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12
No Yes TargetDB (Targets)   5 5

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]